>input_sequence_51345
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--------------------------------------------------ATGGCAAACGATTCTTGGCGCGTCCGAGTG
ATTCGCAGGAGCACCGTCAAGGCCTCCATTACGCGGCCCGGCGCCGTGCTCCCCGTCTCCAACCTCGATCTGTTGTATTA
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCC
CATGCCGCTCTCGATGGTCTGCGCCTACCGCAGGCCCTCGGCCGGCGGTGGCTTCGCAGACGTCGTGGCCGCCTTCGA-C
ACCAAGCTGCCGTCCCTGCTGGACCACTTCTTTCC-GCTCGCCGGCCGCATCGTTGCCAACCCGCGCTCGGGGCTCCCGG
AGGTGCACTGTGACAACCAGGGCGCGGAGCTCGTCGTCGGCGAGGCCGGTGTGGCGCTGGCCGGCCTGGACTTCCGCGAC
CTGGACGCGTCGCTGGCGAGGGTCGGCGTCCCCGTCCAGTACGCCGCGGACGTCGCGCTGTCGGTGCAGCTGCTGTCGTT
CGCCTGCGGCGGCTTCGTTGTGG------CCTGGAGCACCAACCACGGCCTCGCGGACGGGTGCGCGCTCTGCATGATCG
TCGACGCGTGGTCTCAGCTCGCGCGGTCCGGGACGATCGT---CGCCG-C-CCCGAACTACGACCGCTCCGTGTTCCGCC
CCCGTGCCGCGCCGTCGTACGGCCCTTCGGTGGGCGATCTGTTCATGCCGTTGGCGAGCGAGCGTCTCGTCAACGCCCTC
ACGGCCAGGGGCTCCTTGGTCGGCCGCACCTACTACGTCGAGGAGCGGGACCTCACCATGCTGCGCGCGCAGGCGAGCGC
CGACGGGGAGCGCGGCGCGAGCCGCGTCGAGGCGGTGTCTGCGTACCTCTGGAAGGTGTTCGCCGCCACCGTGGGCTCGT
CCGACGACAGTTGCCGCATGGGCTGGTGGGTGAACGGGCGACGGCGTCTCACAGCCGCGCCGGAGGAAGCCATGCGCAAC
TACGTCGGCAACGTCACGACGTTCGCGGTGGTGGAGGCGAGCGTGGACGCGATCCAGCGGCGGCCGCTCCCGGAGATCGC
GTCGATGGTGCGCGAGTCGATCAGGTCGACGGCCACGGACGAGCACTTCCAGGAGCTAGTGGACTGGGTGGAGGAGCACA
AGGGCAATGGCAATGGCAATGGCAAGGCTGCGGTCAACAAGTTCGTGGAGACAGCAACCGTCGGGCTGGGCAGCCCGGCG
ATGGGCGTGACGTCGTTCACGTCCTTCAGCGTCGACACGGACTTGGGATTCGGGCACGCCGCCGTAGCGATGCCGACGTG
GGCGGACTGCGGTAGGCTGTGCTCCGGCTTCGTGAAGATCATGGCGCGTCCGGAGGGTGACGGTGGTGGTGGTGGTTCCT
GGATCTTCGGCATGTCCATTTGGCCCAAGCTCGCCGCCGCGCTGGACTCGGACGAGCAGCGCATCTTCAAGCCTCTCACC
GCCGACTATCTCGGCCTCATGCGCTGGACTC------------------GGTCGCATGCAGCATGCATG----CATGATG
CTCATTAA------------------------------------------------------------------------
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-----------------------------------------------------
>chr4B_1_TraesCS4B01G339100
AGACTCTTGAGTACAATTTTTTCGTAATGGTGTGTTTGTAAAGACCTACGATACTTAATATATGCATTAGGCCTTTTCGC
AAAAAAGGTAACGCCGACGCAAAAATATAAGCGTGTGTATGTGTAATGAACGATCAAAACAACTTATGTCAAATAATTAA
G-AAAAATGT-TGTGACTTTGTGTATAGGTAGTACTTTCATGTTACTATAGACCGACATCCATCTACATGTAAATGTAGC
CAGAGGCGGAACCAAGATTGAAGCAAACCCCGGGACAATTTTTT-TTCTGGCACCATGAATAAATATTGGCACCTATAAC
CAACCTAGGAATACCTCATAACATTCCTAAAAATTGAGCCTTATTTTGTACTCCCTCCGTTCCTAAATATTTGTCTTTCT
AGAGATTTCAACAAATGACTACGTACAAAGCAAAATGTGTGAATCTACACTTTAAAATATATCTATATACATTCGTATAT
GGTAGACCATTTGAAATCTCTAAAAAGACAAATATTAAGGAACGGAGGAAGTATGTTTTTGCTGGGTGACGAGTGATGTT
GCTGATGACTGTA---AAAATATTAGAAAGAATCAATGACATATACATACATGTCGGCGTGGAATCATGTTATCCAAGGC
AGCACTAAA----A-AAAAGGATTCCACGCTGATGACTGTAAAATCATTAAA-AAAGATGCATTTTTCTTCTACAA----
-----------------CAATCTTAAAATGTTGTGTAGGCTCAGTATCTCGACGGTATTCAAAGGATTCAATG-------
--------------------------------------------------------------------------------
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---------------------CATCTGTACCATGTT-A-------------------AAAAAATGCATCTTTGATCTGAT
C--ATATTTGTGTATATTATCATTTTGGCATCCAATC--CTGGCATAGCCAGTACAAAAGATTCCACGCTGACTTTGGAA
TTTTCAAGGTCAACTTCTACTGCAGCGCATACTTGTATA-TACTTCAGGCCAGGGAAAGGAACGAAAGCGTATCTCAGAG
----CAGGTCAGTTTGTACTTTGTAGTAAGCGCCTAAGCGGCAAACAGAAATGGCAAACGATTCTTGGCGCGTCCGAGTG
ATTCGCAGGAGCACCGTCAAGGCCTCCATTACGCGGCCCGGCGCCGTGCTCCCCGTCTCCAACCTCGATCTGTTGTATTA
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCC
CATGCCGCTCTCGATGGTCTGCGCCTACCGCAGGCCCTCGGCCGGCGGTGGCTTCGCAGACGTCGTGGCCGCCTTCGA-C
ACCAAGCTGCCGTCCCTGCTGGACCACTTCTTTCC-GCTCGCCGGCCGCATCGTTGCCAACCCGCGCTCGGGGCTCCCGG
AGGTGCACTGTGACAACCAGGGCGCGGAGCTCGTCGTCGGCGAGGCCGGTGTGGCGCTGGCCGGCCTGGACTTCCGCGAC
CTGGACGCGTCGCTGGCGAGGGTCGGCGTCCCCGTCCAGTACGCCGCGGACGTCGCGCTGTCGGTGCAGCTGCTGTCGTT
CGCCTGCGGCGGCTTCGTTGTGG------CCTGGAGCACCAACCACGGCCTCGCGGACGGGTGCGCGCTCTGCATGATCG
TCGACGCGTGGTCTCAGCTCGCGCGGTCCGGGACGATCGT---CGCCG-C-CCCGAACTACGACCGCTCCGTGTTCCGCC
CCCGTGCCGCGCCGTCGTACGGCCCTTCGGTGGGCGATCTGTTCATGCCGTTGGCGAGCGAGCGTCTCGTCAACGCCCTC
ACGGCCAGGGGCTCCTTGGTCGGCCGCACCTACTACGTCGAGGAGCGGGACCTCACCATGCTGCGCGCGCAGGCGAGCGC
CGACGGGGAGCGCGGCGCGAGCCGCGTCGAGGCGGTGTCTGCGTACCTCTGGAAGGTGTTCGCCGCCACCGTGGGCTCGT
CCGACGACAGTTGCCGCATGGGCTGGTGGGTGAACGGGCGACGGCGTCTCACAGCCGCGCCGGAGGAAGCCATGCGCAAC
TACGTCGGCAACGTCACGACGTTCGCGGTGGTGGAGGCGAGCGTGGACGCGATCCAGCGGCGGCCGCTCCCGGAGATCGC
GTCGATGGTGCGCGAGTCGATCAGGTCGACGGCCACGGACGAGCACTTCCAGGAGCTAGTGGACTGGGTGGAGGAGCACA
AGGGCAATGGCAATGGCAATGGCAAGGCTGCGGTCAACAAGTTCGTGGAGACAGCAACCGTCGGGCTGGGCAGCCCGGCG
ATGGGCGTGACGTCGTTCACGTCCTTCAGCGTCGACACGGACTTGGGATTCGGGCACGCCGCCGTAGCGATGCCGACGTG
GGCGGACTGCGGTAGGCTGTGCTCCGGCTTCGTGAAGATCATGGCGCGTCCGGAGGGTGACGGTGGTGGTGGTGGTTCCT
GGATCTTCGGCATGTCCATTTGGCCCAAGCTCGCCGCCGCGCTGGACTCGGACGAGCAGCGCATCTTCAAGCCTCTCACC
GCCGACTATCTCGGCCTCATGCGCTGGACTC------------------GGTCGCATGCAGCATGCATG----CATGATG
CTCATTAATTAATTTAAGATTAAGTTGGC---CAGCGATTCACACAAATAAACCACAGGTTCTGTTTTCAGATCTTGTTT
TTGGCTAACAGTATTTGTGTGATGGATCCACACAAGTTCTT--TTACTGAATTGGCGGGTGACGGATCCGAGTAAAATGC
ATGCACAGAACCACCAATTTAATGTCATAACTATCACAAAATCAGCGAACCAACCTGTGATTGGATGGTTAGAGGGACTG
TGGTATCCCCATCCCACCAGGGTTCAAATCCTGGTGCTCGCATTTATTCTTGAATTTATTTCAAGATCCTCGCCGTCCGC
TTCTCCCTTGCCGCCCCTCCCCTCGTCCCTTCTACCAGCCAACCCCAATCCTCGTCGTTGTTGCTGCCGAACCTTCATCC
CCGGGCAACTGCTGCCACGGGAGACATCGGTGACGGTCCGCTCCATCCCCCTCTTGGTCCAGTTGATCGTCGTCCTCGCA
CCGCCGTACTCGCACTCCACCTCGGGTGTCCAGCCGCCATCCAGCTCACCCCGACGCCCAGCCGTCCTCGCGCTCCACCC
CGTCGCCCAGCCGCCATCCAGCTCACCCGACGCCCAGCCGTCCTCGGGCTCACCCTGTCCTGACTGCATCCAGTGCGCGA
GCGCCTACGAGGTCGGGGAGGAGGAGGCGGTGGTCGAGGAGGACGTGAGGGTGTCGTGCGAGGTGAGCCAGATCCCCGGC
CAGAGACCCAGGGCGAGGCCCGCGGCGCAATGCATCATCTTCAGCACACTCGGATCCCGCCATCGGCCACAGAAGCAACA
ACGACGTCAGGGACGACAGCCTTGGCGGTCTTCTTCCATGGCGAGTTGAAGCCGAGCTCCTGCAGCGCGCCCTTCGCCCA
GCCCCGATGTAGCTGACGACCTCCCTGGTCTCTGTTGGAAGTCGTGATGGGGAGTCCGGGCACGTCGGTGAGGCACACAA
GCTGTTTGATGCAATGCCACAAAAAGAGGAAGGGGGAGGAAGAAGACCAAGCC
>chr4B_20
TTTGT--------------------AATGGTGCGTTTGTAAGGACCTATGATACTTAATATATGCATTAGGCCTTTCCGC
GAAAAAGGTAACGCCGATGCAAAAATACAAGCGTGTGTACGTGTCATGAACGACCAAAA-AATTTATATCGAATAAAAAT
AAAAACATGT-TGTGACTTTATGTATAGGTAGTACTTTCATGTTACTATAGACCGACATCCATCTACAGATAAATGTAGC
CAGTGGCAGAACCAAGATTGAAGCAAATCCCGGGACAATTTTTTTTTCTGGCACCATGTATGAATATTGGCACCTATAAG
CAACCCAAGAATACCTCATAACATTCCTAAAAATTGAGCCTTATTTTG--------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TATGCTTTTGCTGGGTGACGACTGATGTT
GCTCGTGACTGTA---AAAACATTAAAAAGAATCAATGGCATATACATACATGTCGGCCTGGAATCTTGTTATCCAAGGC
TGCACT--A----A-AAAATGATTCCATGCTGATGACTGTAAAATCATTAAATAAAGATGCATTTTTCTTCTGCGAAGTT
GTCTTTGGCGATTTCGGCAATCTAAAAATATTGTGTAGGCTCAGTATCTTGGAGGTGCTCACAGGGGTCAATGCATTTGT
GGTCATTACCTAAGCCGGTTGCCTCCTCCCCAACAAAAGTCTAGGGTTTCTCTGCCTCCCGCCGGCGCCACCGTCAGTCC
GCCTCATCTCCTTTGGCCTCGGGGCATGTCAGCGCGGTGGATCTCGGCCCTTGCCGGCCCGAGGGCTCTGTTTTCAGTTG
TTTCTTTGTGTTTTGTTATGGTTTGTGGCCTGCTCAGTAAAACGAGACCGCGGTGGCTCCTTGAAGATGGAATAAGATTC
TCCGCGCCTAGCCCCGTCCCGATGGTGTGTCTAACATCACCGGTGGGCGTGTGGAGGTGTGTCTCTGACGGATCTATCCT
TGATGGATTTGCTTGGATCTGGTCGTAGTTTGTCTACGTTCATGTGTTTTTAGATTGGATCCTTTCGACCTATGCTACAC
TTCATCAGCGACGGTTGTTATTCTGCTACATTGGTCCTATGGGGCCTTAGCACAACGACCTCCTGACAATGTACTACAAC
AAGTTTACCCGGCTCCGACGAGGGAGGGATAATGATGGCGGCGCACCTTTGGCTCGCTTCAGTGCTTGTAGTCGTCACTA
GGTGGTCCACGGATTTGGATGTAATTTTTATTATTTCTGTTGTTTGTTGTACTGCCTTTTTCGAAGATGAATAAATTGGA
AGTTTTCTAAAAAAATCAATGCATCTGTACTATGTTAA-------------------AAAATATGCACCTTTGATCTGAT
C--ATATTTGTGTATATTATCATTTTGGCATCCAATC--CTGCCCTAGCCAGTACAAAAGATTCCACGCTGACTTTGGAA
TTTTCAAGGTCAACTTCTACTGCAACACATACTTGTATA-TACTTGCGGGCAGGGAAGG----GAAAGCGTAACTCAGAG
----CAGGTCAGTTTGTAG---------------TAAGCGGCAAACAGAAATGGCAAACGATTCTTCGCGCGTCCGCGTG
GTTCGCAGGAGCACCGTCAAGGCCTCCGTCACGCGGCCCGACGCCGTGCTTCCCGTCTCCAACCTCGACCTGCTGTACTA
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCC
CATGCCGCTCTCGATGGTCTGCGCCTACCGCAGGCCCTCGTCCGGCGGTGGCTTCGTCGACGTCGTCGCCGCCTTCGA-G
GCCAAGCTGTCGTCCCTGCTGGACCACTTCTTTCC-CCTCGCCGGCCGCATCGTGGCTAACCCGCGCTCAGGGCTCCCGG
AGGTGCACTGTGACAACCAGGGCGCGGAGCTAGTCGTCGGCGAGGTCGGCCTGGCGCTGGGCAGCCTGGACTTCGGCGAC
CTGGACGCGTCGCTGGCGAGAGTCGGCGTCCCCGTCCAGTACGACGCGGACATCGCGCTGTCGGTGCAGCTCGTTTCGTT
CTCCTGTGGAGGGTTCGTCGTGG------TGTGGGGCACCAACCACGGCCTCGCGGACGGGTGCGCGCTGTGCATGATCG
TTGACGCGTGGTCTGAGCTCGCGCGGTCTGGGACGGTCGTCGCCGCCG-C-CCCGAACTACGACCGCTCCGTGTTCCGCC
CTCGCGCTGCCCCGTCGTACGGCCCTTCGGTGGGCGAGCTGTTCATGCCGTTGGTGAGCGAGCGTCTCGTCAACGCCCTC
ACGGCCGGGGGCTCCTTGGTCGGCCGCACCTACTACGTCGAGGAGCGGGACCTCGCCATGCTGCGCGCGCAAGCGAGCGG
CGACGGGGAGCGCGGCGCGAGCCGCGTCGAGGCGGTGTCTGCGTACTTGTGGAAGGTGTTCGCCACCACCGTTGGCTCGT
CCGACGAGAGTTGCCGCATGGGCTGGTGGGTGAACGGGCGACGGCGTCTCACCACCACCCCGGAGGAAGCCATGCGCAAC
TACGTCGGCAACGTCACGACGTTCGCGGTGGCGGAGGCGACCGTGGAGGTTATCCAGCGGCGGCCGCTCCCGGAGATCGC
GTCGATGGTGCGCGGGTCGATCAGGTCGACGGCCACCGACGAGCACTTCCAGGAGCTAGTGGACTGGGTGGAGGAGCACA
AGCGCAAGGGCAATGGCAATGGCAAGGCTGCGGTCAA---GTTCGTGGAGACAGCAACCGCCGGGCTGGGCAGCCCGGCG
ATGGGCGTGACGTCGTTCGCGTCCTTCAGCGTCGACACGGACTTCGGATTCGGGCACGCCGCCGTAGCGATGCCTACGTG
GGTGGACTGCGGGAGGCTGTGCTCCGGCTTCGTGAAGATCATGGCGCGTCCGGGGAGTGACGGTGGTGGTGGTGGTTCCT
GGATCTTGGGCATGTCCGTTTGGCCGAAGCTCGCCGCGGCGCTCGACTCGGACGAGCAGCGCATCTTCAAGCCTCTCACC
GCCGAGTATCTCGGCCTCATGGCTGCAGCAAATTAGTATAGCCGGCTCCTGGCTCATTTATATTAATAT-----------
------------------AAGAATAAGTGGGCCAGCGATTCACACAAATAAACCACAGGTTCTGTTTTCAGATCTTGTGG
-----TGGCAGTATTTGTGTGATGGGTCCACACAAGTTTTTGGTTACTGAATTGGCGGGTGATGGAT-------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>chr4D_57
--------------------------------------------------------AATATATGAATTAGGCCTTTCCGT
AGATAAGTTAACGCCGATGCAAAAATATAAGCGTGTGTATGTGTAATGAACGGTCAAAACATTTTATGTTAAATAATAAT
A-AAAAATTACTGTGACTTTGTGTATAGCTAGTACTTTCATGTTACTATAGACCAACATCCATCTACAGATAAATGTAGT
CAGTGGCGGAACAAAGATTGAAGCAAATCCCGGGGCAAAGAAA-TTTCTGGCACCATGAATAAATATTGGCACCTATAAC
CAACCCAAGAATACCTCATAACATTCCTAAAAATTGAGCCTTATTTTG--------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TATGCTTTTGCTGGGTGACTAGTGATGG-
--------CTGTA---AAAACATTAAAAAGAATCAATGACATATACATACATGTCGGCGTGGAATCATGTTATCCAAGGC
TGCACT--A----ATAAAAAGATTCCACACTGATGACTGTAATATCATTAAA-AAAGATGCATTTTTCTTCTACGAAGTT
GTCCGTGACGATTTCAGTAATCTTAAAATGTTGTGTAGGATCAATTTCTCGGAGGTGCTTACAGGGTTCAATG-------
--------------------------------------------------------------------------------
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---------------------CATCTGCACTATGTTAA-------------------AAAAAATGCATCTTTGATCTGAT
C--ATATTTGTGTATATTATCATTTTGGCATCCAATC--CTGCCCTAGCCAGTACAAAAGATTCCACGCTGACTTTGGAA
TTTT-AAGGTCAACTTGTACTGCAACACTAGTATA------ACTTCAGGGCAGGAAAGG----CAAAGCGTACCC-----
-------GTCAGTTTGTAG---------------CAAGCGGCAAACAGAAATGGCAAACGATTCTTCGCGCGTCCGCGTG
GTTCGCAGGAGCACCGTCAAGGCCTCCGTCACGCGGCCCGACACCGTGCTTCCCGTCTCCAACCTCGACCTGCTGTATTA
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCC
CATGCCGCTCTCGATGGTCTGCGCCTACCGCAGGCCCTCGGCCGGCGGTGGCTTCGTCGACGTCGTCGCCGCCTTCGA-G
GCCAAGCTGTCGTCCCTGCTGGACCACTTCTTTCC-CCTCGCCGGCCGCATCGTGGCCAACCCGCGCTCAGGGCTCCCGG
AGGTGCACTGTGACAACCAGGGCGCGGAGCTCGTCGTCGGCGAGGTCGGCCTGGCGCTGGGCAGCCTGGACTTCGGCGAC
CTGGACGCGTCGCTGGCGAGAGTCGGCGTCCCCGTCCAGTACGGCGCGGACGTCGCGCTGTCGGTGCAGCTCGTTTCGTT
CTCCTGTGGAGGGTTCGTCGTGG------TGTGGGGCACCAACCACGGCCTCGCGGACGGGTGCGCGCTGTACATGATCG
TTGACGCGTGGTCAGAGCTCGCGCGGTCTGGGACGATCGT---CGCCG-C-CCCGAACTACGACCGCTCCGTGTTCTGCC
CTCGGGCTGCCCCGTCGTACGGCCCTTCAGTGGGCGAGCTGTTCATGCCGTTGGTGAGCGAGCGTCTCGTCAACGCCCTC
ACGGCCGGGGGCTCCATGCTCGGCCGCACCTACTACGTCGAGGAGCGGGACATTGCCATGCTGCGCGCGCAGGCGAGCGG
CGACGGGGAGCGCGGCGCGAGCCGCGTCGAGGCGGTGTCTGCGTACCTGTGGAAGGTGTTGGCCGCCACCGTGGGCTCGT
CCGACGAGAGTTGCCGCATGGGCTGGTGGGTGAACGGGCGACGGTGTCTCACAACCGCGCCGGAGGAAGCCATGCGCAAC
TACGTCGGCAACGTCACGACGTTCGCGGTGGCGGAGGCGAGCGTGGAGGCGATCCTGCGGCGGCCGCTCCCGGAGATCGC
GTCGATGGTGCGCGGGTCGATCAGGTCGACGGCCACCGACGAGCACTTCCAGGAGCTGGTGGACTGGGTGGAGGAGCACA
AGGGCAAGGGCAAGGACAATGGCAAGGCTGCGGTCAA---GTTCGTGGAGACGGCGACCGTCGGGCTGGGCAGCCCGGCG
ATGGGCGTGACGTCGTTCGCGTCCTTCAGCGTCGACACGGACTTCGGATTCGGGCACGCCGCTGTAGCGATGCCGACGTG
GGTGGACTGCGGGAGGCTGTGCTCCGGCTTCGTGAAGATCATGGCGCGTCCGGGGGGTGACGGTGGTGGTGGTGGTTCCT
GGATCTTCGGCATGTCCGTTTGGCCGAAGCTCGCCGCGGCGCTGGACTCCGATGAGCAGCGCATCTTCAAGCCTCTCACC
GCCGAGTATCTCGGCCTCATGGCTGCAGCAAATTAGTATAGCCGGCTCTGGTCGCATGCAGCATGCATGAATGCATGATG
CCCATTAATTAATTTAAGAAGAATAAGAGGGCCAGCGATTCACACAAATAAACCACAGGTTCTGTTTTCAGATCTTGTGG
-----TGGCAATATTTGTGTGATGGATCTACGCAAGTTTTTGGTTATTGAATTGGCGGGTGATGGATC------------
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-----------------------------------------------------
>chr5A_533
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-------------------------------------------------------TTTTTGCTGGGTGACAAGTGATGTT
GCTGATGACTGTAAACAAAACATTAAAAAGAACCAGTGACATATACATACATATTGGCATGGAATCATGTTATCCAAGGC
TGCCCTGGCAAGTA-AAAGAGATTCCGCACCGATCACTGTAAAAACATTT-A-AAAGATGCATTTTTTTTCTACAGAT--
---------GACTTCGTCAATCTAAAGATATTGTGCCGGCTGAGTATCTTCAAGGTGCTCATAGGGTTGAATA-------
--------------------------------------------------------------------------------
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---------------------TATGTGCATGTGTGTAAGCATCTGTTCTATTGTGTTAAAAAATGCATCTTCGATCTGAT
CATATATTTGTGTATATTATCATTTTGGCATCCAAAGCGCTGCTCCAGCCAGTACAAAAGATTCCGCGCTGACTTTGGAA
TTTTCAAGGTCAACTTCTACTGCAACACTTGTATA------AGTTCAGGGCAGGAAAGG----CAAAGCGTATCTCAGAG
----CAGTTCAGTTTGTAG---------------CAAGCGGCAAACAGAAATGGCAAACGATTCTTCGCGCGTCCGCGTG
GTTCGCAGGAGCACCGTCAAGGCCTCCGTCACGCGGCCCGGCGCCGTGCTTCCCGTCTCCAACCTCGACCTGCTGTATTA
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCC
CATGCCGCTCTCGATGGTCTGCGCCTACCGCAGGCCCTCGACCGGTGGTGGCTTCGTCGACGTCGTCGCCGCCTTCGA-G
GCCAAGCTGCCGTTCCTGCTCGACCACTTCTTCCC-CCTCGCCGGCCGCATCGTGGCCAACCCGCGCTCAGGGCTCCCGG
AGGTGCACTGTGACAACCAGGGCGCGGAGCTCGTCGTCGGTGAGGTCGGCCTGGCGCTGGGCAGCCTGGACTTCGGCGAC
CTGGACGCGTCCCTGGTGAGGGTCGGCGTCCCTGTCCAGTATGCCGCGGACGTCGCGCTGTCGGTGCAGCTCGTTTCGTT
CTCCTGTGGAGGGTTCGTTGTGT------CCTGGAGCACGAACCACGGCCTCGCGGACGGGTGCGCCCTGTGCATGATCG
TTGACGCGTGGTCTGAGCTCGCGCGGTCCGGGACGATCGT---CGCCG-C-CCCGAACTACGACCGCTCCATCTTCCGCC
CTCGTGCCGCGCCGTCGCACGGCCCTTCGGTGGGCGATCTGTTCTTGCCGCTGGTGAGCGAGCGTCTCGTCAACGCCCTC
ACGGCCGGGGGCTCCTTGGTCGGCCGCACCTACTACGTCGAGGAGCGGGACCTCGCCATGCTGCGCGCGCAGGCGAGCGC
CGACGGGGAGCGCGGCGCGAGCCGCGTCGAGGCGGTGTCTGCGTACCTGTGGAAGGTGTTCGCCGCCACCGTGGGCTCGT
CGGACGAGAGTTGCCGCATGGGCTGGTGGGTGAACGGGCGACGGCGTGTCACAACCGCGCCGGAGGAAGCCATGCGCAAC
TACGTCGGCAACGTCACGACGTTCGCGGTGGCGGAGGCGAGCGTGGACGCGATCCAGCGGAGGCCGCTCCCAGAGATCGC
GTCGATGGTGCGCAAGTCCATCAGGTCGACGGCCACCGACGAGCACTTCCAGGAGCTGGTGGACTGGGTGGAGGAGCACA
AGGGCAAGGGCAA------TGGCAAGGCTGCGGTCAA---GTTCGTGGAGACGGCGACCGTCGGGCTGGGCAGCCCAGCG
ATGGGCGTTACGTCGTTCGCGTCCTTCAGCGTCGACACGGACTTCGGATTCGGGCACGCCGCCGTAGCGATGCCTACGTG
GGTAGACTGCGGGAGGCTGTGCTCCGGCTTCGTGAAGATCATGGCGCGTCCGGGGGGTGACGGTGGTGGTGGTGGTTCCT
GGATCTTCGGCATGTCCGTTTGGCCGAAGCTCGCCGCAGCGCTCGACTCCGATGAGCAGCGCATCTTCAAGCCTCTCACC
GCCGAGTGTCTCGGCCTCATGGCTGCAGGAAATTAGTATAGCCGGCTCTGGTCGCATGCAGCATGCATG----CATG---
--CATTAATTAATTTAAGAATAAGAGGG----CAGCGATTCACACAAATAAACCACATGTTCTGTTTTCAGATCTTGCGG
-----TAGCAGTATTTGTGTGATGGATCCACGCAAGTTTTT--TT-----------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>chrUn_782
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--------------------------------------------------------------ATGCATCTTCGATCTGGT
GATATATTTGTGTATATTATCATTTTGGCATCCAAAGCGCTGCTCCAGCCAGTACAAAAGATTCCACGCTGACTTTGGAA
TTTTCAAGGTTAACTCCTACTGCAACATTTGTATATATAGTACTTCAGGGCATGGAAGG----GAAAACGTATCTCAGAG
ACAGCAGGTCAGT------------------------------------------------TTCTTTGCGTGTTCGAGTG
ACCTGCAGGAGTATCGTCAAGGCCTCCGTCACACGGCCCGGCGCCGTGCTTCCCGTCTCCAACCTCGACCTGCTGTATTA
TCCATAGTTTTAAATAGTCGGCTATACTCCGTTATAGCCTTTTCAGCAGAGTTCTGCTAAATAGTCGTCTTCATAAATAG
TCTGCTATACCTCCGCTATAGCTGATTCGAAGGCCCATCGCTATTTTTTATAGCCCGCTATTTAAACATTGGTATTACCC
AATGCCGCTATCGATGG---------------GGCCCTCCGCCAGCGGTGGCTTCGTCAACGTCGTCGCCGCCTTCGA-G
GGCAAGTTGTCGCCCCTGCTGGACCACTTTTTTCC-GCTCGCAGGCCGCATCGTGGCCAACCCGCGGACATGGCTCCCAG
AGGTGCACTGCGACAACCAGGGCGCGGAGCTCGTCGTTGTTGAGGTCGGCGTGGCGCTAGGCAGCCTGGACTTCGGCGAC
ATGGACGCGTCGCTGGCGAGGGTCGGCATCCCCGTCCAGTACGACGCGGGCGCCGCGCTGTCGGTGCAGCGGGTGCCGTT
CGCCTGCGGCTGGTTCGTTGTGGCCTGGACCCGGAGCACTAACCACGGCCTCGCGGATGGGTGCACGCTGTGCATGATCG
TAGACGCATGCTCTGAGCTCACGCGGGCCAGGACGATCGT---TGCCA-C-CCCGAACTTTGACTGATACTTGTTCCGCC
GTCGCACCACGCCGTCGTACGGCCCTTCGGTGGGCGAGTTGTTCATGCCGCTGGTGAGCAAGCGTCTCGTCAACGCCCTC
ATGGCCGGGGGTTCCTTGGTCTGCCGCACCTACTACGTCGAGGAGCGGGACCTCGCCATGCCGCACGCGCAGGCGACCGA
CGACGGGGAGCACGGAGCGAGCCGCGTTGAGGCGGTGTCTGCATACCTATGGAAGGTGTTCGCCGCCACCGTGGGCTTGT
CGGACCAGAGTTGCCGCATGGGCTCGTGGGTGAACGGGCGACGACGTCGCACCACCGCGCCGGAGGAAACCAGACGCAAC
TACGTCGGCTACGTCACGGCATTTGCGGTGGCCGATGCGAGCACAGACGCGATCCAGCGGCGGCCGCTCCCTGAGATCGC
GTCAATGATGCGCGAGTCGATTAGGTCGACGACCACCGACGAGCACTTCCAGGAGCTGCTGGACTGGGT-----------
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-----------------------------------------------------
>chr4B_1146
--------------------------------------------------------------------------------
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--------------------------------GGCCCTCCGCGGGCGGTGGCTTCGTCGACGTCATCGCCGCGTTCGA-G
GGCAAGCTGTCGCCCTTGCTGGACCACTTCTTTTCTGCTCGCAGGCCGCATCGTGGCCAACCCGCGGACAGGGCTCCTGG
AGGTGCACTGCGACAAGCAGGGCGCGGAGCTCGTCGTCATCGAGGTCGGCGAGGCGCTAGGCAGCCTGGACTTCGACGAC
ATGGACGCGTCGCTGGCGAGGGTCGGCGTTCCCGTCCAGTACGGCACGGACGCCGTGCTGTCGGTGCAGCTGGTGTCTTT
CGCCTGCGGCTGGTTCGTTGTGACCTGGACCTGGAGCACTAACCACGGCCTCGCGGACGGGTGCACGCTGTGCATGATCG
TTGACGCGTGGTCTGAGCTCGCGCGGGCCGGGACGATCGT---CGCCA-C-CCTGAACTTTGACTGATCCTTATTCCGCC
CTCGCACCACGCTGTCGTACGGCCCTTCGGTGGGCAAGCTGTTCATGCTGCTGGTGAGCGAGCATCTCGTCAACGCCCTC
ACGGCCGGGGGCTCCTTGGTCTGCCGCACCTACTACGTCGAGGAGCGGAACCTCGCCATGCTGCGCGCGCAGGCGACCGG
CGACGGGGAGCACGGGGCGAGCCGCGTTGAGGCGGTTTCTGCATACCTATGGAAGGTGTTCCCCGCCACCGTGGGCTTGT
CAGACCAGAGTTGCCGCATGGGCTGGTGGGTGAACGGGCGACGGCGTCGCATCACCGTGCCGGAGGAAACCAGGCGCAAC
TACGTCGGATACGTCACGACGTTCACGGTGGCCGAGGGGAGCACGAACGCGATCCAGCGGCGGCCGCTCCCTGAGATCGC
GTCGATGGTGTGCGAGTCGATTAGGTCGACGGCCACCGACGAGCACTTCCAGGAGCTGCTGGACTGGGT-----------
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-----------------------------------------------------
>chr4B_1146
--------------------------------------------------------------------------------
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--------------------------------GGCCCTCCGCCAGCGGTGGCTTCGTCAACGTCGTCGCCGCCTTCGA-G
GGCAAGTTGTCGCCCCTGCTGGACCACTTTTTTCC-GCTCGCAGGCCGCATCGTGGCCAACCCGCGGACATGGCTCCCAG
AGGTGCACTGCGACAACCAGGGCGCGGAGCTCGTCGTCGTTGAGGTCGGCGTGGCGCTAGGCAGCCTGGACTTCGGCGAC
ATGGACGCGTCGCTGGCGAGGGTCGGCATCCCCGTCCAGTACGACGCGGGCGCCGCGCTGTCGGTGCAGCGGGTGCCGTT
CGCCTGCGGCTGGTTCATTGTGGCCTGGACCAGGAGCACTAACCACGGCCTCGCGGATGGGTGCACGCTGTGCATGATCG
TAGACGCATGCTCTGAGCTCACGCGGGCCAGGACGATCGT---TGCCA-C-CC-GAACTTTGACTGATACTTGTTCCGCC
GTCGCACCACGCCGTCGTACGGCCCTTCGGTGGGCGAGTTGTTCATGCCGCTGGTGAGCAAGCGTCTTGTCAACGCCCTC
ATGGCCGGGGGTTCCTTGGTCTGCCGCACCTACTACGTCGAGGAGCGGGACCTCGCCATGCCGCACGTGCAGGCGACCGG
CGACGGGGAGCACGGAGCGAGCCACGTTGAGGCGGTGTCTGCATACCTATGGAAGGTGTTCGCCGCCACCGTGGGCTTGT
CGGACCAGAGTTGCCGCATGGGCTCGTGGGTGAACGGGCGACGACGTCGCACCACCGCGCCGGAGGAAACCAGGCGCAAC
TACGTCGGCTACGTCACGGCATTTGCGGTGGCCGATGCGAGCACAGACGCGATCCAGCGGCGGCCGCTCCCTGAGATCGC
GTCAATGATGCGCGAGTCGATTAGGTCGACGACCACCGACGAGCACTTCCAGGAGCTGCTGGACTGGGT-----------
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>chrUn_1146
--------------------------------------------------------------------------------
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--------------------------------GGCCCTCCGCCAGCGGTGGCTTCGTCAACGTCGTCGCCGCCTTCGAGG
GGCAAGTTGTCGCCCCTGCTGGACCACTTTTTTCC-GCTCGCAGGCCGCATCGTGGCCAACCCGCGGACATGGCTCCCAG
AGGTGCACTGCGACAACCAGGGCGCGGAGCTCGTCGTCGTTGAGGTCGGCGTGGCGCTAGGCAGCCTGGACTTCGGCGAC
ATGGACGCGTCGCTGGCGAGGGTCGGCATCCCCGTCCAGTACGACACGGGCGCCGCGCTGTCGGTGCAGCGGGTGCCGTT
CGCCTGCGGCTGGTTCGTTGTGGCCTGGACCCGGAGCACTAACCACGGCCTCGCGGATGGGTGCACGCTGTGCATGATCG
TAGACGCATGCTCTGAGCTCACGCGGGCCAGGACGATCGT---TGCCACC-CC-GAACTTTGACTGATACTTGTTCCGCC
GTCGCACCACGCCGTCGTACGGCCCTTCGGTGGGCGAGTTGTTCATGCCGCTGGTGAGCAAGCGTCTCGTCAACGCCCTC
ATGGCCGGGGGTTCCTTGGTCTGCCGCACCTACTACGTCGAGGAGCGGGACCTCGCCATGCCGCACGCGCAGGCGACCGA
CGACGGGGAGCACGGAGCGAGCCGCGTTGAGGCGGTGTCTGCATACCTATGGAAGGTGTTCGCCGCCACCGTGGGCTTGT
CGGACCAGAGTTGCCGCATGGGCTCGTGGGTGAACGGGCGACGACGTCGCACCACCGCGCCGGAGGAAACCAGACGCAAC
TACGTCGGCTACGTCACGGCATTTGCGGTGGCCGATGCGAGCACAGACGCGATCCAGCGGCGGCCGCTCCCTGAGATCGC
GTCAATGATGCGCGAGTCGATTAGGTCGACGACCACCGACGAGCACTTCCAGGAGCTGCTGGACTGGGT-----------
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>chrUn_1146
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--------------------------------GGCCCTCCGCCAGCGGTGGCTTCGTCAACGTCGTCGCCGCCTTCGA-G
GGCAAGTTGTCGCCCCTGCTGGACCACTTTTTTCC-GCTCGCAGGCCGCATCGTGGCCAACCCGCGGACATGGCTCCCAG
AGGTGCACTGCGACAACCAGGGCGCGGAGCTCGTCGTCGTTGAGGTCGGCGTGGCGCTAGGCAGCCTGGACTTCGGCGAC
ATGGACGCGTCGCTGGCGAGGGTCGGCATCCCCGTCCAGTACGACGCGGGCGCCGCGCTGTCGGTGCAGCGGGTGCCGTT
CGCCTGCGGCTGGTTCATTGTGGCCTGGACCAGGAGCACTAACCACGGCCTCGCGGATGGGTGCACGCTGTGCATGATCG
TAGACGCATGCTCTGAGCTCACGCGGGCCAGGACGATCGT---TGCCA-C-CC-GAACTTTGACTGATACTTGTTCCGCC
GTCGCACCACGCCGTCGTACGGCCCTTCGGTGGGCGAGTTGTTCATGCCGCTGGTGAGCAAGCGTCTTGTCAACGCCCTC
ATGGCCGGGGGTTCCTTGGTCTGCCGCACCTACTACGTCGAGGAGCGGGACCTCGCCATGCCGCACGTGCAGGCGACCGG
CGACGGGGAGCACGGAGCGAGCCACGTTGAGGCGGTGTCTGCATACCTATGGAAGGTGTTCGCCGCCACCGTGGGCTTGT
CGGACCAGAGTTGCCGCATGGGCTCGTGGGTGAACGGGCGACGACGTCGCACCACCGCGCCGGAGGAAACCAGGCGCAAC
TACGTCGGCTACGTCACGGCATTTGCGGTGGCCGATGCGAGCACAGACGCGATCCAGCGGCGGCCGCTCCCTGAGATCGC
GTCAATGATGCGCGAGTCGATTAGGTCGACGACCACCGACGAGCACTTCCAGGAGCTGCTGGACTGGGT-----------
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>chrUn_1146
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--------------------------------GGCCCTCCGCCAGCGGTGGCTTCGTCAACGTCGTCGCCGCCTTCGA-G
GGCAAGTTGTCGCCCCTGCTGGACCACTTTTTTCC-GCTCTCAGGCCGCATCGTGGCCAACCCGCTGACATGGCTCCCAG
AGGTGCACTGCGACAACCAGGGCGCGGAGCTCGTCGTCGTTGAGGTCGGCGTGGCGCTAGGCAGCCTGGACTTCGGCGAC
ATGGACGCGTCGCTGGCGAGGGTCGGCATCCCCGTCCAGTACGACACGGGCGCCGCGCTGTCGGTGCAGCGGGTGCTGTT
CGCCTGCGGCTGGTTCATTGTGGCCTGGACCCGGAGCACTAACCACGGCCTCGCGGATGGGTGCACGCTGTGCATGATCG
TAGACGCATGCTCTGAGCTCACGCGGGCCAGGACGATCGT---TGCCA-CCCC-GAACTTTGACTGATACTTGTTCCGCC
GTCGCACCACGCCGTCGTACGGCCCTTCGGTGGGCGAGTTGTTCATGCCGCTGGTGAGCAAGCGTCTCGTCAACGCCCTC
ATGGCCGGGGGTTCCTTGGTCTGCCGCACCTACTACGTCGAGGAGTGGGACCTCGCCATGCCGCACGTGCAGGCGACCGG
CGACGGGGAGCACGGAGCGAGCCACGTTGAGGCGGTGTCTGCATACCTATGGAAGGTGTTCGCCGCCACCGTGGGCTTGT
CGGACCAGAGTTGCCGCATGGGCTCGTGGGTGAACGGGCGACGACGTCGCACCACCGCGCCGGAGGAAACCAGGCGCAAC
TACGTCGGCTACGTCACGGCATTTGCGGTGGCCGATGCGAGCACAGACGCGATCCAGCGGCGGCCGCTCCCTGAGATCGC
GTCAATGATGCGCGAGTCGATTAGGTCGACGACCACCGACGAGCACTTCCAGGAGCTGCTGGACTGGGT-----------
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>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSS-------S--------S------S---------------------------S---
-----------------S--------------------------------------------S--------------S-S
S-------------------------------------------------------------------SS----------
---S-----------------------S----------------------------------------------------
-----S-S----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
--------------------S----S------------------------------------------------------
S-----SS-----------S------------------------------------------------------------
----------------------------------------------------S---SS---S---S--------------
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------------------------------S-------------------------------------------------
------------------------------------------S-S-----------------------------------
------------------------S-S----------------------S-------S-SSSS-----------------
------------------SSSSSSSSSSSSSSSS--------------------------------S-------------
---------------------------S-S--------------------S-----------------S---S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------SS--------S------------S
S-----------------------------------------------------S--------------S----------
---------------------------------------------S---S----------S-S-----------S-----
------------------------------------------------------------------------S-------
------------S--------------------------------------------------------S----------
-S------------S-----------------------------------------------------------------
-S----------------------------------------------------S-------------------------
------S-----------------------------------------------S-------------------------
------------------------------------------------S-------------------------------
-------S---------------------------------------------S--------------------------
-------------------------------S------------------------------------------------
------------------------------------S-------------------------------------------
-------S-----------------------------SSS----------------------------------------
------------------S-------------------------S-----------------------------------
--S---------S----------------------------------------S--------------------------
-----------------S-------S-----------S------------------------------------------
-----S---------------SSSSSSS-SS-------------------------------------------------
-S-----------------S----SS--S-------------------------------------------------SS
SSSSS--S------------------------------S-----------------------S-----SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1663
--------------------------------------------------------------------------------
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-------------------------------------------TTCAGGCCAGGGAAAGGAAC-----------------
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-----------------------------------------------------
>reverse_3624
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------TCAAATCCTGGTGCTCGCAT-------------------------------------
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-----------------------------------------------------
