>input_sequence_51329
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATGGAGCAC
CACCAGCGGCTGCTGCATTTGTCGCCACACCAAGAGCACCTCATGATCGGCCCGGGCTTCTTCGACGTTGACCCGATGCA
CTTCCACGGCGACGACGCCGGCTTCCTCGCGGTGCAGCCGGCCGC---------CGACGATGGCGCCTGGATGGAGGACC
TCATGCATCTCGGCGACGAGCTGTTCGGCGGTGGTGGCGGCGGCGGCGGCGCCGGGGACGACAACGACATGGTGGGCGCT
GCTGCTGCTGCTGACCAGGCATGGCGGCAGGAATGCGAGGGCGCGTCCCCGGACGACCACCCCTGCAGCTACGACGACGT
GATCAGCCCTGTCTCCGGGGAGCAAGGCGCGGGCTTCGAGCCCAGCCGCGACGACAGCGACCTGTCGGGGACGAGGAAGA
GGCGAGACCGCTCCAAGACCATCGTGTCGGAGCGCAAGAGGAGGTTCCGGATGAAGGAGAAGCTATACGAGCTCAGAGCT
CTCGTCCCCAACATCACAAAGGTTAGTACTACT--ACTCTAGTTTGTACTACTCAGG---ATCCTCTCATGTCGTGATCG
ATAGAAACAGTTTGTGGAGTACACA-CCAATTCTTACTGGGAGCGCGCGTCACTTTCCTCTG----------CAGATGGA
CAAGGCCTCCATCATCGCCGACGCAGTGGCGTACGTCAAGAACCTGCAGTCGCACGCCAGGAAGCTCAAGGAGGACGTGG
CGACGCTCGAGGCGCGGCCGGGGTTGGCCGGC---CG---GCGGCAGCAGCTGCAGCAGAAGCAGGGCCGCCG-------
--GCACGGCCGCAACGGCGGCGACGACGAGGGGAACAGCGGCAGCTCCAGAGGGGGCGGCGGCGCGCGGGTGACGCTAGT
GAGCGCGGCCCAGGTGGGCGAGGGCCGGTTCTTCGTGACGGTGGAGTGCGAGCGGCGGGACGGCGTGGCGGCGCCTCTCT
GCGCGGCCGTCGAGTCCCTCGCCGGCTTCCTGGTGGAGAGCTCCAACCTCGGCTGCTCGTCAGACCGCGTCGTGTCAACT
CTCACACTCAAGGTACTACTCCCTCCGTCCGAAAATACTTGTTATCAAAATGGATAAAAAAATGTATCTAAAACTAAAAT
ACACCTAAATACATCTTTTTTAGTTGCAAGCAACGACTCCCAT-AAATAATCATTATTCATTTCCGCGACAAGTAAC-TC
GGACGGAAAGAACATATCTATAC---------------------------------------------------------
----------TACGTACTTGTAGTATAGTATGAATTTTTCTCTCGATTGATTCCTCTAGAAACTGTGATGCTCTCTCTGT
GCATGG-----AATTCCAGGGCTCCAAACGAGTG---ATACTTAGTTGTACTGATGTGGTATCGCCGTGCGTG----TGT
GCAGGTTAGTGAAGCAAGGGAGGAGGTGATGATCAGCGACCGCACGGTGAAGCTGTGGGTGATGGCGGCGCTGCTCAGCG
AGGGCTTCCGGCCAGAAGCCACGTCGGAGATCTGCTAA------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr2A_1_TraesCS2A01G281200
ATCCGGGCATTGCCAACCGACGTGCCCAGACAAACCCGCGGGCGTGTGGGAGCCGCAATTTACCAATCCTGGTTGTAGAT
GCTCTTAGTGAACCAATAATTAACTGGCACAGCTACATATCCATGTTTAAACAAGCAAGAATCAACCCAGCTAGAGACAA
CTTACAGTCTACACAAGTTTAGATTTGTAGGTGGCCAGTCAAATAGACCTAGGTAGCCCCCCGCAAAAAAAAAGATAGAC
CTAGGTAGCGGTCTACTCCCTTCGTCCGAGTTTATTAGGCCTCTCAGCATCACAAGCATGTCCCCTTTTATAAGGCCCCG
CATTGGAAAGGTGCATGCATGCAACCATTTCATTGGTTGTATTGAAAGCTATTGTTGTTGGTGCCATGACTGAAAAGTTA
ATACACTTCATGTGTGCTTTTTCATTGGCTGCATGCATGTGAGAGAGTGCATTGGGAGTGGAATGGAATAATTAATGTGA
GCAAATTATTATGTGTCTTGGTCTAAGAGAAGTTGTCTTTAGACCTAATAAACCCGGACGGAGGGAGTACTAGTATCGAT
TCCCATGCACTAGTAGCAGTTAACCTTGATTAAAAGAAAATTGTTCAAGTGTCACCCTAATCTAATCTAATATTTCCCGC
AAAAAAATCTAATCTAATCTAATCTATTGTGCATCTAATCGATCCATGGGGAGGTGCTCAGTTCATGCCTG-TTAACAAC
ATTTTGTAGTAGTATACGGTTAGCTGCTTCGTGTCAAACCGCTGGCTGGCCGTCGACGGCATAAACAACCC---------
-------------CCTCCAATCACC-----ACCATCTTCTTCCCCTCCGCTGTAAATTCCATATAG--TAGGGCGCAGCA
CAAACTGGATCCAAACAAGATTCCTTCCACATCCAAAAGGCTGCGAGGGCTATATATAAAAAGCGCGGCACCCACCGGAG
CTCCCGCC-CGCCTTGCCTCAATCACTTTACCAAGATAACCCACCACCGGCCGTACCCAATCGAATCGGTAATGGAGCAC
CACCAGCGGCTGCTGCATTTGTCGCCACACCAAGAGCACCTCATGATCGGCCCGGGCTTCTTCGACGTTGACCCGATGCA
CTTCCACGGCGACGACGCCGGCTTCCTCGCGGTGCAGCCGGCCGC---------CGACGATGGCGCCTGGATGGAGGACC
TCATGCATCTCGGCGACGAGCTGTTCGGCGGTGGTGGCGGCGGCGGCGGCGCCGGGGACGACAACGACATGGTGGGCGCT
GCTGCTGCTGCTGACCAGGCATGGCGGCAGGAATGCGAGGGCGCGTCCCCGGACGACCACCCCTGCAGCTACGACGACGT
GATCAGCCCTGTCTCCGGGGAGCAAGGCGCGGGCTTCGAGCCCAGCCGCGACGACAGCGACCTGTCGGGGACGAGGAAGA
GGCGAGACCGCTCCAAGACCATCGTGTCGGAGCGCAAGAGGAGGTTCCGGATGAAGGAGAAGCTATACGAGCTCAGAGCT
CTCGTCCCCAACATCACAAAGGTTAGTACTACT--ACTCTAGTTTGTACTACTCAGG---ATCCTCTCATGTCGTGATCG
ATAGAAACAGTTTGTGGAGTACACA-CCAATTCTTACTGGGAGCGCGCGTCACTTTCCTCTG----------CAGATGGA
CAAGGCCTCCATCATCGCCGACGCAGTGGCGTACGTCAAGAACCTGCAGTCGCACGCCAGGAAGCTCAAGGAGGACGTGG
CGACGCTCGAGGCGCGGCCGGGGTTGGCCGGC---CG---GCGGCAGCAGCTGCAGCAGAAGCAGGGCCGCCG-------
--GCACGGCCGCAACGGCGGCGACGACGAGGGGAACAGCGGCAGCTCCAGAGGGGGCGGCGGCGCGCGGGTGACGCTAGT
GAGCGCGGCCCAGGTGGGCGAGGGCCGGTTCTTCGTGACGGTGGAGTGCGAGCGGCGGGACGGCGTGGCGGCGCCTCTCT
GCGCGGCCGTCGAGTCCCTCGCCGGCTTCCTGGTGGAGAGCTCCAACCTCGGCTGCTCGTCAGACCGCGTCGTGTCAACT
CTCACACTCAAGGTACTACTCCCTCCGTCCGAAAATACTTGTTATCAAAATGGATAAAAAAATGTATCTAAAACTAAAAT
ACACCTAAATACATCTTTTTTAGTTGCAAGCAACGACTCCCAT-AAATAATCATTATTCATTTCCGCGACAAGTAAC-TC
GGACGGAAAGAACATATCTATAC---------------------------------------------------------
----------TACGTACTTGTAGTATAGTATGAATTTTTCTCTCGATTGATTCCTCTAGAAACTGTGATGCTCTCTCTGT
GCATGG-----AATTCCAGGGCTCCAAACGAGTG---ATACTTAGTTGTACTGATGTGGTATCGCCGTGCGTG----TGT
GCAGGTTAGTGAAGCAAGGGAGGAGGTGATGATCAGCGACCGCACGGTGAAGCTGTGGGTGATGGCGGCGCTGCTCAGCG
AGGGCTTCCGGCCAGAAGCCACGTCGGAGATCTGCTAAGCCACG--------TGTCGTCATTCCATGTGTTGTTAGTAGT
GTGGCGTGTGGCGTGTCCTCTGGTTTGTCCCTGTCCGTCCGATCCGTAACTGAGTAC----------------TACAGAA
AGTGGCCGAGTT--GTACCGCTGCTGTGCTTCAGTCGACCAGGGCCGTCGCCCGGCCCGCATGGCTGGTCAAACGGCGCC
GTTAAATGTATCAAGCAATTGACGGTAACAAACGCTAGCTATGGCCGCCTGTGACTGTGATGCACTATCGTTCGCTCAAC
TATGCCGTGCCATGAACAGACACTCGTACACAATTTTTGCCCATGGTATATATGCAGTGTACCCAGTTAC----------
-----------------------------------ACACTCACTCCGTAACTCATTCGCTCGCATTCAAGCACGTAGGCA
TCGG-TCAAGTGCTCGATCGAGACCATGACACGGATTATAAACTAGGACTGCAAAGTTCACTTTGGTAGGGACTCAACAG
TAAAGGTAAGCGATTAAGTAGGTTATGTCTTTTATAATTTCCATGTTGTAACTTCCTGGTTCTGACTTCTGAGTTATATT
GGCCCTTGTACAATGCAGAGTA-TTTTTTAACACGGTATAAGCGCAGACGCTCGTACAGATTGCTGCATATACACTTATC
CAGTGGCGGAGGCACAGAGGGGCCAGCCAGGGCCGGGCCCTCCCCAACATCCTAATTTCCTTGGTAATATGCATATGAAC
AGTGACATCTTTTTACTGTTACCTGCAGTCGGCCCTCCCTAACGTCCAATTATATGCATTCCTGCTTCCGCCACTGCACT
TATCCATATGAACGCACGCATGCACACCTTACCCCTGTGAGAACCTCTAAGCCGGCACATTATCTTCAGATTGACAAAGT
CACTGCAGACCCCTTCGTGAACGCACATCACCAGAAGAACTGAAATAAATCTAGGAAAATGTGACCATCAATGCCAAGTT
TAGGACTTGAACCCTGGTGGGTTAGTCCCACCACAAGGAACCTACACTCAGTTCGCACAATGCAAGGTATT
>chr2D_11
----------TGCCAGCGGACATGCCCGGATGAGCCCGCGGGCGTTTGAGAGCCGCAATTTGCCAATCCTGATTGTAGAT
GCTCTTAGTGAACCAATAATTAACTGGCACAGGTACATATCCATGTTTAAA----CAAGAATCAACCCAGCTAGAGACAA
CTTACAGTCTACACAACTTTAGATTTGTAGGTGGCCAGTCAGATAGACCTAGGTAGCACGCGGTC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TACTAGTATCGAT
TCCCATGCACTAGTAGCAGTTAACCTTGATTAAAAGAGAATCATTCAAGTGTCACCCTAATCTAATCCA-----------
---------------------------TGTGCATCTAATCGATCCATGGGGAGGTGCTCAGTTCATGCCTG-TTAACAAC
ATTTTGTAGTAGTATACGGTTAGCTGCTTCGTGTCAAACCGCTGGCTGGCTGTCGACGGCATAAACAACCC---------
-------------CCTCCAATCACTTCCAT-CCATCTTCTTCCCCTCCGCTGTAAATTCCATTCCATATAGGGCGCAGCA
CAAACTGGATCCAAACAAGATTCCTTCCACATCCAAAAGGCTGCGAGGGCTATATATAAAAAGCGCGGCACCCACCGGAG
CTCTCGC-----CTTGCCTCAATCACTTTACCAAGATAACCCACCACCGGCCGTACCC-----AATCGGTAATGGAGCAC
CACCAGCGGCTGCTGCATTTGTCGCCACACCAAGAGCACCTCATGATCGGCCCGGGGTTCTTCGACGTTGACCCGATGCA
CTTCCACGGCGACGACGCCGGCT---TCGCGGTGCAGCCGGCCGC---------TGACGATGGCGCCTGGATGGAGGACC
TCATGCATCTCGGCGACGAGCTGTTCGGCGGTGGAGGT---GGCGGCGGCGCCGGGGACGACAACGACATGGTGGGCGCT
G---CTGCTGCTGACCAGGCATGGCGGCAGGAATGCGAGGGCGCGTCCCCGGACGACCACCCCTGCAGCTACGACGACGT
GATCAGCCCTGTCTCCGGGGAGCAAGGCGCGGGCTTCGAGCCCAGCCGCGACGACAGCGACCTGTCGGGGACGAGGAAGA
GGCGGGACCGCTCCAAGACCATCGTGTCGGAGCGCAAGAGGAGGTTCCGGATGAAGGAGAAGCTATACGAGCTCAGGGCT
CTCGTCCCCAACATCACAAAGGTTAGTACTACTCTAGTTCCTACTGTACTTCTAATTTGTATCCTCTCATGTCGTGATCG
ATAGAAACAGTTTGTTACACGAGATGCCAATTCTTACTGGGAGCGCGCGTCTCTTTCCTCTGTACGTACGTGCAGATGGA
CAAGGCTTCCATCATCGCCGACGCAGTGGCGTACGTCAAGAACCTGCAGTCGCACGCCAGGAAGCTCAAGGAGGACGTGG
CGACGCTCGAGGCGCGGCCGGGGTTGGCCGGCCGGCG---GCAGCAGCAGCAGCAGCAGAAGCAGGGCCGGCGGCAGGGG
CAGCACGGCCGCAACGGCGGCGACGACGAGGGGAACAGCGGCAGCTCCAGAGGGGGCGGCGGCGCGCGGGTGACGCTAGT
GAGCGCGGCCCAGGTGGGCGAGGGCCGGTTCTTCGTGACGGTGGAGTGCGAGCGGCGGGACGGCGTGGCGGCGCCTCTGT
GCGCGGCCGTCGAGGCCCTGGCCGGCTTCCTGGTGGAGAGCTCCAACCTCGGCTGCTCGTCGGACCGCGTCGTGTCAACT
CTCACACTCAAGGTACTACTCC----------------------------------------------------------
-------------------TTAGTTACAAGCAACGACTCCCATGAAATAATCATTATTCATTTCTGCGACAAGTAATTTC
GAACAGAGAAAGTATTTCTATAC---------------------------------------------------------
----------TACTTGCATAGGAA-----------CTTGCTCTCGATTGATTCCTCCAGAAACTGTGGCGCTCTCTCTGT
GCATTGGAATTAATTCCAGAGCTCCAAACGAGTG---ATACTTAGTTGTACTGATGTGGTATCGCCGTGCGTG----TGT
GCAGGTTTGTGAAACAAGGGAGGACGTGATGATCAGCGATCGCACGGTGAAGCTGTGGGTGATGGCGGCGCTGCTCAGCG
AGGGCTTCCGGCCAGAAGCCACGTCGGAGATCTGCTAAGCCAGCCAGCCAGCTGTCGTCATTCCATGTGTTGTTAGTAGT
GTGGCGTGTGGCGTGTCCTCTGGTTTGTCCCTGTCCGTCCGATCCGTAACAGATGGCTGCTCAAGGTCAAGGATACAGAA
AGTGGCCGAGTTGTGTACCGCTGCTGTGCTTCAGTCGACCAGGGCCGTCGCCCGGCCCGCATGGCTGCTCAAACGGCGCC
GTTAAATGTATGAAGCAATTGACGGTAACAAACGCTAGCTATGGCCGCCTGTGA------TGCACTATCTT----TCAAC
TATGCCGTGCCATGAACAGACACTCGTACACA-TTTTTGCCCGTGGTATATATGCAGTGCACGCAAGAAGAATTAGCACT
GGCATATACCACTACTACTA---CTGTACCCAGTTACACTCACTCTGTAACTCGTTTGCTCGCATTCAAGCACGTACGCA
TC-G-TCAAGTACTCGATCGAGACTGTGACACAGATTATAAACTAGGACTGCAAAGTTCACTTTGGTAGGGACTCAATAG
TAAGGGTAAGCGAATAAGTAGGTTCTGTCTTTTATAATTTCCATGTTGTAACTTCCTGGTTCTGACTTCTGAGTTATATT
AGCCCTTGTATAATGCAGAGCA-TTTTTTAACACGGTATAAACACAGACGCTTGTATTTATGCACATA------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CACT
TATTCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr2B_548
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------TACTAGTATCGTT
TCCCATGCACTAGTAGCAGTTAACCTTGATTAAAAGAGAATTATTCAAGTGTCACCCTAATCTAATCTA-----------
---------------------------TGTGCATCTAATCGATCCATGGGGAGGTGCTCAGTTCATGCCTGTTTAACAAC
ATTTTGTAGTAGTATACGGTTAGCTGCTTCGTGTCAAACCGCTGGCTGGCTGTCGACGGCATAAACAACCCAGTGGAGTA
ATTAATCCAACCCCCTCCAATCCCTGCTGTACCATCTTCTTCCCCTCCGCTGTTA-----ATTCCATATAGGGCGCAGCA
CAAACTGGGTCCAAACAAGATTCCTTCCACATTCAAAAGGCTGCGAGGGCTACATATAAAAAGCGCGGCACCCACCGGAG
CTCCCGCGACGCCTTGCCTCAATCACTTTACCAAGATAACCCACCACCGGCCGTACCGAATCGAATCGGTAATGGAGCAC
CACCAGCGGCTGCTGCATTTGTCGCCACACCAAGAGCACCTCATGATCGGCCCGGGCTTCTTCGACGTTGACCCGATGCA
CTTCCACGGCGACGACGGCGGCT---TCGCGGTGCAGCCGGCCGCCGCGGTCGTCGACGATGGCGCCTGGATGGAGGACC
TCATGCATCTCGGCGACGAGCTGTTCGGCGGTGGAGGTGGCGGCGGCGGCGCCGGGGACGACAACGACATGGTGGGCGCT
G------CTGCTGACCAGGCATGGCGGCAGGAATGCGAGGGCGCGTCCCCGGACGACCACCCCTGCAGCTACGACGACGT
GATCAGCCCTGTCTCCGGGGAGCAAGGCGCGGGCTTCGAGCCTAGCCGCGACGACAGCGACCTGTCGGGGACGAGGAAGA
GGAGGGACCGCTCCAAGACCATCGTGTCGGAGCGCAAGAGGAGGTTCCGGATGAAGGAGAAGCTATACGAGCTCAGGGCT
CTCGTCCCAAACATCACAAAGGTTAGTACTAGT--AGTTCCTACTGGACTTGCAATTTGTATCCTCTCGTGTCGTGGTCG
ATAGAAACAGTTTGTGGAGTAGGCA-CCAATTCTTACTGGGAGCGCGCGTCACTTTCCTCTGTACGTACGTGCAGATGGA
CAAGGCCTCCATCATCGCCGACGCAGTGGCGTACGTCAAGAACCTGCAGTCGCACGCCAGGAAGCTCAAGGAGGACGTGG
CGACGCTCGAGGCGCGGCCGGGATTGGCCGGCCGGCGGCAGCAGCAGCAGCAGCAGCAGAAGCAGGGCCGGCGGCAGGGG
CAGCACGGCCGCAACGGCGGCGACGACGAGGGGAATAGCGGCAGCTCCAGAGGGGGCGGCGGCGCGCGGGTGACGCTAGT
GAGCGCGGCCCAGGTGGGCGAGGGCCGCTTCTTCGTGACGGTGGAGTGCGAGCGGCGGGACGGCGTGGCGGCGCCTCTCT
GCGCGGCCGTCGAGTCCCTGGCCGGCTTCCTGGTGGAGAGCTCCAACCTCGGCTGCTCGTCGGACCGCGTCGTGTCAACC
CTCACACTCAAGGTACTACTCC----------------------------------------------------------
-------------------TTAGTTGCAAGCAACGACGCTCGTCAAATAACCATTATTCATTTCTGTGACAAGTAATTTT
AGACGAAGAAAGTATTTGAACTAAAACCACGACGAATAATTTGAAACGGTCACCCGCAAAAAAGAAAAGAGTAATTTGGA
ACGGAGGGAGTACTTGCATGGGAA-----------TTTTCTCTCGATTGATTCCTCTAGAAACTGTGGTGCTCTCTCTGT
GCATGG-----AATTCCAGAGCTCCAAACGAGTAGTAATACTTAGTTTTACTGATGTGGTATCGCCGTGCGTGCGTCTGT
GCAGGTTAGTGAAGCAAGGGAGGAGGTGATGATCAGCGATCGCACGGTGAAGCTGTGGGTGATGGCGGCGCTGCTCAGCG
AGGGCTTCCGGCCAGAAGCCACGTCGGAGATCTGCTA--------AGCCAGCTGTCGTCATTCCATGTGTTGTTAGTAGT
GTGGCGTGTGGCATGTCCTCTGGTTTGTCCCTGTCCGTCCCATCCGTAACAGATGGCTGC------TCAAGGATACAGAA
AGTGGCCGAGTT--GTACCGCTGCTGTGCTTCAGTCGACCAGGGCCGTCGCGCGGCCCGCATGGTTGGTCAAACGGCGCC
GTTAAATGTATGAATCAAGTGACGGTAACAAACGCTAGCTATGGCCGCCTGTGA--GTGATGCACTATCGT----TCATC
TATGCCGTGCCATGAACAGACGCTCGTACACG-TTTTTGCCCACGGTATTTATGCAGTGCGCGCAAGAAGAATTAGCACT
GGCATATACTGCTACCACTGCTGCTGTACCCAGTTACACTCACTCTGTAACTCGTTCGCTCGCATTCAAGCACGTAGGCA
TC-GGTCAAGTACTCGATCCAGACTGTGACACAGATTATAAACTAGGACTACAAAGTTCACTTTGGTAGGGACTCAATAG
TAAGGGTAAGCGATTAAGTAGGTTCTCTCTTTTATAATTTCCATGTTGTAACTTCCTGGTTCTGACTTCTGAGTTATATT
AGCCTTTGTACAATGCAAAGTATTTTTTTAACACGGTATAAATGCAGACGCTCGTACATATGCACATA------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CACT
TATTCATATGAACGCACGCATGCACACCCTACCCCTGCGAGAACCTTTAAGCCGGCACATTATCTTCAGATTGATAAAGT
CGCCGCAGACCCCTTCGTGGATGCACATCACCAGAAGAACTGAAATAAATCCAGAAAAATATGACCACCAATGCCAAGTC
TAGGACTTGAACCTTGGTGGGTTGGTCCAACCACAAGGAACCTA---------------------------
>SNPs
SSSSSSSSSS-----S-S---S-----S--SS-S-----------S--S------------S---------S--------
--------------------------------S------------------SSSS-------------------------
----------------S------------------------S---------------S-S-S-SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-------------------------------------S----S--------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------S-----------------------------
------------------------S-------------------------------------SSSS--------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------SSS------------------------------------------------------
----------------------------------S--S------------------------------------------
-SSS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-----------------------------------------------------------------------S---
------------------------------------S-SSSSSS------S--S-SS-----------------------
---------------------SS---------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------S------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------------------------------S------------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS---------------------------------------------S-----------S---
-------S-S-SS--S----------------------------------------------------------------
-------------S-S-S--SSSSSSSSSSSSSSS--------------------------------S------------
-------------------S------------------------------------------------------------
---------------------------------------S----------------------------------------
------------------------------------------SS------------------------------------
--------------------------------------------------S--SSS------------------------
--------------------------------------------------------------------------------
-----------S------------------------------------------SS---------------SSSS-----
--------------------------------S--------------------------S--S--SSS-S----------
---------------------------------------------S-------S--------------------------
--S--------S------------SS------S--------------------------------------------S--
---S--------------------S-------------------------------------------------------
S----------------------------------------S----------------S--SSSSSS-SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
---S------------------------S--------S--------S---------------------------S-----
-S-S---------------S-S-----------------------------S--S-----S------S-----------S
-------------S---------S----S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_329
--------------------------------------------------------------------------------
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---------------------------------------------------------------------ATAAGGCCCCG
CATTGGAAA-----------------------------------------------------------------------
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>reverse_1517
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AGCT
CTCGTCCCCAACATCA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CATTGGAAAGGTGCATGCA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_2225
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CGCGACAAGTAACTCG
GACG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_2114
--------------------------------------------------------------------------------
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--------------ACTACTCCCTCCGTCCGAAA----------------------------------------------
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-----------------------------------------------------------------------
>reverse_3515
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CAAAGT
CACTGCAGACCCCT------------------------------------------------------------------
-----------------------------------------------------------------------
