>input_sequence_51322
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---------------------------------------------------------------ATGGGTGCCTCCACACC
TCGCCACCATTCCAGCTCCTGGCGCCACAAGCTTGGACGCCTCACCAAGAAGATCCTCACATTGTCGCTCTACGCCCTCG
TCCCCCTCGCCGTCCTCCACTACCTC---TCCCCTCCTCCCGTCGCCGTCCCCTCCTCCACTTCCACCTCGCCGCCCCAC
GGTAACCATCTCAAAGACTCGAGACCCGCTGATCCATCGCCAT--------------------------------TGTGG
ATGCGGGACGGCACAATGACGCTATTTT---TGTTGTTCTTGGTTTGTAGATGGGAATAAGCAGCAGGGT------GCTG
CAGGGGCGGCGTCAAGAAAGCAGGGGTCAACGGCACCGGCGCCGCGGTGCGACTACTCGGAGGGGCAATGGGTGCGGGAC
GCGGCGGGGCCGCGGTACAACGGGACGAGCTGCGGCGCGACGATCAAGGGCGGGCAGAACTGCATGGCGAACGGGCGACC
GGACACGGGGTACCTGAACTGGCGGTGGCAGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCGCGGAGTTCCTGGAGC
AGGTGCGCGGCCGGCACATCGCGTTCGTCGGGGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGC
TCGGAGTTCCCCGCAGAGCTGGTCCTCGACGGCGGCGAGGAGCGCAAGTTCCGGCGGTGGGCGTTCAGGTCCCACAACGC
GACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAATGGCACGGAGAAGT------------------------------
----CGTCGGCGCCGGGCGGGCCCGACCACAACAAGCTGTA-------CCTCGACCAGCCGGACGAGCGGTGGGCGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCATCGGGCACTGGTTCATGCACCCGGCCATGTACTATGAGCGCGGCGCG
GTGATCGGGTGCCATCACTGCCCGGAGCCGAACCGCACGGAGACGGGCTTCTTCGGCGTGTTCCGCCTCGCCGTCAAGAA
CGCACTCCGCGAGGTCATCGCCCGGGCCAGGGCCAGCCCCGGGAGGGAGAAGCTGGCGATGGTGGCGACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGGAGCCGTACGCGCCGGGGGAGAAGGAGATGCTG
TACATGGACAGAGAGATGTGGCGGACGGAGGCGGAGGAGGCCGCGACGGCGGCCGCGGAGGCCACGGTGCGCGGGTCGGC
GGTGACGGTGGAGGCGCTCGAGGTGACGAGGCTGGCGGACATGCGCGCCGACGGGCACCCGGGCGCGTACATGAACGCGT
CCCTGCTGGCCGGCGCCGGCGGTGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGCACTGGTGCCTCCCGGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTCAAGCGATGGAGTGACGCCTCCTCCTCGTCGGCCAGATGA-----
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>chr5D_1_TraesCS5D01G203200
GCCGCCTTGCGCTTGGAAGTGCGCTCGACGGAGCCGACGCGCTCCCCATCGTACATCTGCCTGATGCGGGGGCTACGGCG
AGCAGCCGAGGGGGGCGCCGTCAGATCTTGGGCAGAAGAGCCAGCATCTACCACCTGCTGGTCCTGCGCAGCTGCTGCCA
AAGCTTGGACAGCAGAACCGGCGTCAGTGTCGGCGGTGGCCTCCAGGAGGATCTGGTCGTCGACGGGAGGGAGGGGACCG
ATCCCTAGGCCCAGGTCGGCTTGAGCTGCATCGTCGGCAAGCGGCGGCGCCTGGTGGGTGATGATGCTGGAGGCAACAGG
AGGAGCATCGAAGAGTGGGAGCGTGGGCAAGGGGCGGAGATCTTCGGCTCGTGGCTCTGGCGGCGGCGTGCGGCAGGAGC
AGAAGGTTGTGGCGATGTGAGCGGGGAGCAGGGAGCACGCCCCGTGGAGCAGGTTGGTGTTAGCCACAGGGGACCGGTCG
CAGCCAAGCAGGCCGTCA-CCCAAGGCAGGGCGTGCAAGGAGTACTAAAATTAAAGTCAATTACGCTACGTAATTGACTT
TAATTTTAGTACTCCCTCTGAAAAAAATATAAAATCGCTTAGATAAAAAACAATGTACGATTTTTAAGAGTATCTTCACT
GCGTGGTTGTACGATTGTAAGCGCAGACCCCTAATACAATGACCTTCCTGGAGGTTTCTATTTTATTTTGATTAAATTCA
GTGGCGCTAAAAAAATCAAAACTATGATAACTATAATAGTCATTTTAATGTTGGAAAGTCTAATGCTCGGGATTCTCGCA
GAGAAGAA-------TTATGAAGACGTTATACTCCTGCCGGTACAGGATCTACAAACTCTCTT----------TCCGATC
CTACCTCCACTAACCTCTCTCTCACT--CTTTCCTCCATTTGGAAACTAGTCACCAGATCCAAGTCTTTTGAGTTTGGAG
CCCCCATTCCTCTCATCAACCAACGAT---CTACCTAAAGATAGCCAAGCTTCCTCGGCTGCCATGGGTGCCTCCACACC
TCGCCACCATTCCAGCTCCTGGCGCCACAAGCTTGGACGCCTCACCAAGAAGATCCTCACATTGTCGCTCTACGCCCTCG
TCCCCCTCGCCGTCCTCCACTACCTC---TCCCCTCCTCCCGTCGCCGTCCCCTCCTCCACTTCCACCTCGCCGCCCCAC
GGTAACCATCTCAAAGACTCGAGACCCGCTGATCCATCGCCAT--------------------------------TGTGG
ATGCGGGACGGCACAATGACGCTATTTT---TGTTGTTCTTGGTTTGTAGATGGGAATAAGCAGCAGGGT------GCTG
CAGGGGCGGCGTCAAGAAAGCAGGGGTCAACGGCACCGGCGCCGCGGTGCGACTACTCGGAGGGGCAATGGGTGCGGGAC
GCGGCGGGGCCGCGGTACAACGGGACGAGCTGCGGCGCGACGATCAAGGGCGGGCAGAACTGCATGGCGAACGGGCGACC
GGACACGGGGTACCTGAACTGGCGGTGGCAGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCGCGGAGTTCCTGGAGC
AGGTGCGCGGCCGGCACATCGCGTTCGTCGGGGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGC
TCGGAGTTCCCCGCAGAGCTGGTCCTCGACGGCGGCGAGGAGCGCAAGTTCCGGCGGTGGGCGTTCAGGTCCCACAACGC
GACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAATGGCACGGAGAAGT------------------------------
----CGTCGGCGCCGGGCGGGCCCGACCACAACAAGCTGTA-------CCTCGACCAGCCGGACGAGCGGTGGGCGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCATCGGGCACTGGTTCATGCACCCGGCCATGTACTATGAGCGCGGCGCG
GTGATCGGGTGCCATCACTGCCCGGAGCCGAACCGCACGGAGACGGGCTTCTTCGGCGTGTTCCGCCTCGCCGTCAAGAA
CGCACTCCGCGAGGTCATCGCCCGGGCCAGGGCCAGCCCCGGGAGGGAGAAGCTGGCGATGGTGGCGACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGGAGCCGTACGCGCCGGGGGAGAAGGAGATGCTG
TACATGGACAGAGAGATGTGGCGGACGGAGGCGGAGGAGGCCGCGACGGCGGCCGCGGAGGCCACGGTGCGCGGGTCGGC
GGTGACGGTGGAGGCGCTCGAGGTGACGAGGCTGGCGGACATGCGCGCCGACGGGCACCCGGGCGCGTACATGAACGCGT
CCCTGCTGGCCGGCGCCGGCGGTGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGCACTGGTGCCTCCCGGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTCAAGCGATGGAGTGACGCCTCCTCCTCGTCGGCCAGATGATGCCA
CTGAAACTCAACCGTAGTTTGGCACCACACCAGTAGTGGTTACTCTTCATACATTCGAAAAACTGAAACGAAAGATAGAG
AAATTTCGCATATGTTTGTAGGAATTCATACGAAAACATCGGTTTGTCCATGAGTGATTCTGTGCTTGG-------TTGG
TGGTGAGTGCATCGGCGTTCCGCGGGCGACAAGGCTGGTGAGACGGCGCCAAATGCGGATTGTGGGGAGGTGTAGCGA--
TTTGCCTTTTCCATTCCATTCAACCATGGTTCCCCAGAAAAGAAGGGCATAGCCATTCAATAATCGCAAGAGTACGACGC
ATCGAGAGAGTGGCAGGAGCCG------------ATCGATCCTAGCCAGCCAGGTCGGTGGTGGCGTGGTGCGGAGTTGA
CGCCGTTGCGGATCCCGGGTGCGGCGTCGCCTCTGCCCACACGGTACCCAAGGATCACAACTACCGACAGTGTTCAAGGA
GTACTACC------TAGTTAAAAAAAATCCGTAGACGGAAACAACGTTGAGTAAAAATACAGTAATAAAAAATTCG-AAC
ACCGAAAGAGTTTTCAACTCAAGGAGTACAATCACCGACAGTGCATTACAGTAAACTTGAGAGCAGGTTCCAGATTCCCC
TGATAAACTCGTTGAACTGCGCGAACGGAAACAAAGAAATGTCGTATGATGCCCTTGTTAAGTATGATTGTCCATTTCAG
GTTGGTCAAAAGTCACGGCAAGCCCTGCAAATAACCAGTCACGAAGATCTGTGCAATTGCTGAATGTGCTTTCATAGTGG
CACTCCCACGTGAGAGGCAAGCTTTGAAATATAACAGCCCTTTCAGACTTAGACAATTATACATATCTCTATTATTAAAG
GGGATCGAACATCGTGATGGTTCGACCTTCCCTCGTGGTTCGACCTCTCCAGCCTCGTACGTAACTTGTGCCTGTGAAGA
AAAAATCGGACCTCCTCACAACCCATCCGTGCACGATAGAAAAAAAGAAAAGAAAATAAAACA
>chr7D_1
GCCGCCTTGCGCTTGGAGGCGCGCTCGACGGAGCCGACGCCCTCCCCATCATACATCTGCCTGATGCGGGGGCTGCGGCG
AGCAGCCGAGGGGGGCGCCGTCAGATCTTGGGCAGAAGAGCCAGCAGCTACCACCTGTTGGACCTGCGCAGCTGCTGCCA
AAGCTTGAACCGCAGAGCCGGCGTCAGGGTCGGCGGTGACCTCCTGGAGGATCTGGTCGCCGGGAGGCGGGAGAGGACCT
ATCCCTAGGCCCAGAACGGCCTGAGCTGCGTCACCGGCAAGCGTGGGCGCCTGGCAGGTGATGATGCTGGAGGCAACAGG
GGT-GCATCAAGGAGTGGGAGCGTGGGCAGGGGGCGGAGATCTTCAGCCCTTGGTTCTGGCGGCGGCGTGCGGCAGGAGC
AGAAAGTTGTGGCCGCGTGAGCGGGGAGCAAGGAGCAAGCCCCGTGCAGCGGGTTGGTGTTAGCCACAGGGGACCGGTCG
CAGCCAAGCAGGCCGTCGCCCAAAGTAGGGGCGTGC--------------------------------------------
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>chr2A_2
-CCGCCTTGCGCTTGGAAGCGCGCTCGACGGTGCCGACGCGCTCCCCGTCGTACATCT----------------------
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------------------------------------------------------------------GCCT------GATG
CGGGGGCTACGGCGAGCAGCCGAGTG------------------------------------------------------
----------------------------------GGGCGCCGCCAGATCTCGGGCCGAAGAG------------------
------------------------------------------------CCAACAGCTACCACCTGCAGGTCTGGCACAGC
TGCTGCCAAAGCATGGTCATCAGAACC-----------------------------------------------------
----------------------------------------AGCGTCAGGGTCGGCGGGGGCCTCCAG-------------
---------AGGGATCAGATCGCCGACG---GGGAGGGGACCGATCCCCAGGTTCAGGTCGGCATGAGCTGCATCGCCGG
CGAGCGGCGGTGCCTGGTGGGGGATGATGCAAGAGGCAACAGGGGGAGCATCGAAAAGTGGGAGCATGGGCAAGGGGCGG
AGATC---------------------------------------------------------------------------
-------------------------------------------------------------TTCGGCTCGCGGCTCA---
-------------------------------GGCGGCGGCGTGCGGCAAGAGCAGAAGGATGTGGCGATGTG--------
-----------------------AGCGGGGAGCAGAGAGCATGCCCCGTGCAGCAAGTT---------------------
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--------------------------------------------------------------------GGTGTTGGCCAC
AGGGGACCGGT---------------------CGCAGCCAAGCAGGCCATAGCCCAAGGCAGGGGCGTGC----------
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>chrUn_4
---GCCTTGCGCTTGGAAGAA-----------------------------------------------------------
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-----------------------------------------------------------------CGCTCGACGGAGCCG
ACGCGCTCCCCGTCGTAT--------------------------------------------------------------
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--------------------------------------------------------------ATCAGCCT------GATG
CGGGGGCTGCGGCGAGCAGCCGAGGG------------------------------------------------------
----------------------------------GGACGCCGACAGATCTTGAGCAGAGGAG------------------
------------------------------------------------CCAGCAGCTAGCGCCTGCTGATCCAGCTCAAC
TACGGCCAGAGCCTGGACTGTAGAGCC-----------------------------------------------------
----------------------------------------GGCGCCAGGGTCGGCGGGGGCCTCAAG-------------
---------GGGGATCTGGTCGCCGATGGGAGGGAGGGGACCGATCCCTAGATCCAGGACGGCATGAGCTGCGTCATTTG
CAAGTGGCGACGCATGGTGGGAGATGGTGCAAGAGGTAATAGGCGGAGCATCGAAGAGCGGGAGCGTGGGCAGGGGGCGG
AGATC---------------------------------------------------------------------------
-------------------------------------------------------------TTCAGCTCGCGGCTCT---
-------------------------------GGTGGTGGCGTGCAGCAAGAGCAGAAGGACGTGGCGATGTG--------
-----------------------AGCGGGGAGCCGAGAGCACGCCCCGTGCAGCAGGTT---------------------
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--------------------------------------------------------------------GGTGTTGGCCAC
AGGGGACCGGT---------------------CGCAGCCAAGCAGGCCATCACCCAAGGCAGGCGCGTGC----------
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>chr5A_629
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---------------------------------------------------------------------GTATCTTCACT
GCGTGGTTGTATGATTGTAAGCGCAGACCC--------ATGACCCTCATGGAGGTCTCTATTTTATCTTGATTAAATTCA
GTGGAGCTAAAAAATTCAAAACTACGATAACTATAATAGTCATTTTAATGTTGAAAAGTCTAATGCTCGAGATTCTCGCA
GAGAAGAA-------TTATGAAGACATTATACTCCTGGTACAC-------------CTCTCCT----------TCCGATC
TCATCTCCACTAACCTCTCTCACACTCCC--TCCTCCATTTGGAAACTAGTCACCAGATCCAAGTCCTTTGAGTTTGGAG
CCCCCATTCCTCTCATCAACCAACGATCTTCTACCTAAAGATAGCCAAGCTTCCTCGGCTGCCATGGGTGCCTCCACACC
TCGTCACCATTCCAGCTCCTGGCGCCAGAAGCTTCCACGCCTCACCAAGAAGATCCTCACATTGTCGCTCTACGCCCTCG
TCCCCCTCGCCGTCCTCCACTACCTCCTCTCCCCTCCTCCCGTCGCCGTCCCCTCCTCCACTTCCACCTCGCCGCCCCAC
GGTAACCATCTCAGAGATTCAAGAACCCG-------TCGCCAT--------------------------------TGTGG
ATGCGGGACGGCACAATGACGCTATTTTTGTTGTTGTTCTTGGTTTGTAGATGGGAATAAGCAGCAGGGG------GCTG
CAGGGGCGGCCTCAAGAAAGCAGGGGTCAACGGCACCGGCGCCGCGGTGTGACTACTCGGAGGGGCAATGGGTGCGGGAC
GCAGCGGGGCCGCGGTACAGCGGGACGAGCTGCGGCGCGACGATCAAGGACGGGCAGAACTGCATGGCGAACGGGCGACC
GGACACGGGGTACCTGAACTGGCGGTGGCAGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCGCGGATTTCCTGGAGC
AGGTCCGCGGCCGGCACGTCGCGTTCGTCGGCGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGC
TCGGAGTTCCCCGCGGAGCTGGTCCTCGACGGCGGCGAGGAGCGCAAGTTCCGGCGGTGGGCGTTCAGGTCCCACAACGC
GACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAACGGCACGGAGAAGT------------------------------
----CGGCGGGGCCGGGCGGGCCCGACCACAACAAGCTGTA-------CCTCGACCAGCCGGACGAGCGGTGGGCGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCATCGGGCACTGGTTCATGCACCCGGCCATGTACTACGAGCAGGGCGCG
GTGATCGGGTGCCACCACTGCCCGGAGCCGAACCGCACGGGCACGGGCTTCTTCGGCGTGTTCCGCCTCGCCGTCAAGAA
CGCGCTCCGCGAGGTCATCGCCCGGGCCAGGGCCAGCCCCGGGCGGGAGAAGCTGGCGGTGGTGGCGACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGGAGCCGTACGCGCCGGGGGAGAAGGAGATGTTG
TACATGGACAGAGAGATGTGGCGGACGGAGGCGGAGGAGGCCGCGACGGCGGCCGCGGAGGCCACGGTGCGCGGGTCGGC
GGTGACGGTGGAAGCGCTCGAGGTGACGAAGCTGGCGGACATGCGCGCCGACGGGCACCCGGGCGCGTACATGAACGCGT
CCCTGTTGGCCGGCGCCGGCGGTGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGCACTGGTGCCTCCCGGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTCAAGCGATGGAGTGACGCCTCCTCCTCGTCGGCCAAATGATGCCA
CTGAAACTCAACCGTAGTTTGGCACCACGCCAGTAGTGGTTACTCTTCATACATTCGAAAAACTGGAACGAATGATAGAG
AAATTTCGCATATGTTTGTAGGAATTCATACGAAAACATCGGTTTGTCCGTCAGTGGTTCTGTGCTTGGTTGGTGGTGAG
G-----GTGCATCGGCGCTCCGCGGGCGACAAGGC-GGTGAGACGGCGCCGAATGCGGATCGTGGTGAGGTGTTGGCGC-
-TTGCCTTTTCCATTCCATTGAACCATGGTTCCCCAGAAAAGAAGGGCATAGCCATTCAATAATCGCAAGGGTACGACGC
ATCGAGAGAGTGGCAGTAGCAG------------ATCGATCCTAGCCAGCCAGGTCGGTGGTGGCGTGGTGCGGAGTTGA
CGCCGTTGCGGATCCCGGGTGCGGCGTCGCCTCTGCCCACACGGTACCCAAGGAGCACAACCACCGACAGTGTTCAAGTA
GTACTACTACTACGTAGTTAAAAAAATCCGC-AGACGGAAACAACGTTGAGTAAAAATACAGTAATAAAGAATTCG-AAC
ACCGAAAGAGTTTTCAACTCAAGGAGTACAATCACCGACAGTGCATTACAGTAAACTTGAGAGCAGGTTCCAGATTCCCC
TGATAAACTCGTTGAACTGCGCGAACGGAAA-------------------------------------------------
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>chr5B_750
CTATAAT-------------------------------------------------------------------------
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-----------------------------------ATAGTCATTTTAATGTTGGAAAGTCTAATGCTCGGGATTCTCGCA
AAGAAGAACTATGATTTATGAAGACGGTATACTCCTGCTGGTACATTCAAGTACCTCATTTGGTATAATATACTCCGATC
TCATCTCCACTAACCTCTCTCTCACT--C--TCCTCCATTTGGAAACTAGTCGCCAGATCCAAGTCT----------GAG
CCCCCATTCCTCTCAGCAACGAACGA---TCTACCTAAAGATAGCCAAGCTTCCTCGGCTGCCATGGGTGCCTCCACACC
TCGCCACCATTCCAGCTCCTGGCGGCAGAAGCTTCCACGCCTCACCAAGAAGATCCTCACATTGTCGCTCTACGCCCTCG
TCCCTCTCGCCGTCCTCCACTACCTCCTCTCCCCTCCTCCCGTCGCCGTCCCCTCCTCCACATCCACCTCGCCGCCCCAC
GGTAACCATCTCAAAGACTCGAGACCCGCTGATCCATCGCCAT--------------------------------TGTGG
ATGCGGGACGGCACAATGACGCTATTTT---TGTTGTTCTTGGTTTGTAGATGGGAATAAGCAGCAGGGT------GCTG
CAGGGGCGGCCTCAAGAAAGCAGGGGTCAACGGCACCGGCGCCGCGGTGCGACTACGCGGAGGGGCAATGGGTGCGGGAC
GCGGCGGGGCCGCGGTACAACGGGACGAGCTGCGGCGCGACGATCAAAGACGGGCAGAACTGCATGGCGAACGGGCGACC
GGACACGGGGTACCTGAACTGGCGGTGGCAGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCGCGGAGTTCCTGGAGC
AGGTGCGCGGCCGGCACGTCGCGTTCGTCGGGGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGC
TCGGAGTTCCCCGCAGAGCTGGTCCTCGACGGCGGCGAGGAGCGCAAGTTCCGGCGGTGGGCGTTCAGGTCCCACAACGC
GACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAACGGCACGGAGAAGT------------------------------
----CGTCGGCGCCGGGCGGGCCCGACCACAACAAGCTGTA-------CCTCGACCAGCCGGACGAGCGGTGGGTGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCATCGGGCACTGGTTCATGCACCCAGCCATGTACTACGAGCACGGCGCG
GTGATCGGGTGCCACCACTGCCCGGAGCCGAACCGCACGAACACGGGCTTCTTCGGCGTGTTTCGCCTCGCCGTCAAGAA
CGCGCTCCGCGAGGTCATCGCCCGGGCAAGGGCCAGTCCCGGGAGGGAGAAGCTGGCGATGGTTGCGACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGGAGCCGTACGCGCCGGGGGAGAAGGAGATGCTG
TACATGGACAGAGAGATGTGGCGGACGGAGGCGGAGGAGGCCGCGACGGCGGCCGCGGAGGCCACGGTGCGCGGGTCGGC
AGTGACGGTGGAGGCGCTCGAGGTGACGAGGCTGGCGGACATGCGCGCCGACGGGCACCCGGGCGCGTACATGAACGCGT
CCCTGTTAGCCGGCGCCGGCGGTGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGCACTGGTGCCTCCCGGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTCAGGCGATGGAGCGACGCCTCCTCGTCG---GCCAGAGGATACCA
CTGAAACTCGACCGTAGTTTGGCACC-----AGTAGTGGTTACTCTTCATACATTCGAAAAACTGAAACGAAAGATACAG
AAATTCCGCATATGTTTGTAGAAATTCATACGAAAACATCGGTTTGTCCATCAGTGATTCTGTGCTTGGTTGGTGCTTGG
TGGTGAGTGCATCGGCGCTCCGCGGGCGACAAGGCTCGTGATACGGCGTCAAATGCGGATCGTGGGGAGGTGTAGCGCGG
TTTGCATTTTCCATTCCATTCAACAATGGTTCCCCAGAAAAGAAGGGCATAGCCATTCAATAATCGCAAGAGTACGACGC
ATAGAGAGAGTGGCAGGAGCAGGTACACCCGCAGATCGATCCTAGTGAGCCAGGCCGGTGGTGGCGTGGTGCGGAGTTGA
CGCCGTTGCGGATCCCGGGTGCGGCGTGGCCTCTGCCCACACGGTACCCAAGGAGCACAACCACCGACAGTGTTCAAGGA
GTACGCAGTT-----------AAAAAATCCGTAGACGGAAACAACGTTGAGTAAAAATACAGTAATAAAAATTTCGAAAC
ACTGAAAGAGTTTTCAACTCAAGGAGTACAATCACCGACAGTGCATTGCAATAAACTTGAGAGCAGGTTCCAGATTCCCC
TGATGAACTCGTTGAACTGCGCGAACGGAAACAAAGAAATGTCGTATGATGCCCTTGTTAAATATGATTGTCCATTTCAG
GTTGGTCAAAAGTCACGGCAAGCCCTGCAAATAACCAGTCACGAAGATCTGTGCAA---CTGAATGTGCTTTCATAGTGG
CACTCCCACGTGAGAGGCAAGCTTTAAAATATGACAACTTTTTCAGACTTAGAC--------------------------
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>chr5A_1054
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------------------------------------ACGCCTCAC---GAAGATCCTCACCTTGTCGCTCTACGCCATCC
TCCCTCTCGTCCTCCTCTTCTACCTCCTCTCCCCTCCTCCCATCGCCGCCCCACCCTCCACTTCCACCTCGCCGCCCCAC
GGTAACCACGACT------------CCGCTAATCCATCGCCTGCCTGCGCACATTAATTGCCGCTTCCATGGGCGTGTCC
GTGTGCGCCAGCGCAATGACGCGGTTCTTTGT-TTGTTCATGGTTTGCAGGTGAGAGGCAGCAGGTGGTGAAGACCGCTG
CAGGGGCGCCGCCAGGAACCCAGGGGTCGAA---ACCGGCGCCGCAGTGCGACTACTCGGAGGGGGAATGGATTCCGGAC
GCGGCGGGGCCGCGGTACACCGGGACGAGCTGCGGCGCGACGATCAAGCACGAGCAGAACTGCATCGTGAACGGCCGGCC
GGACACGGGGTACCTGAACTGGCGGTGGCGGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCACTGAGTTCCTGGAGC
TGGTGCGCGGCCGGCACGTCGCGTTCGTAGGCGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGC
TCGGAGTACCCCGTCGAGCTGGTCCTTGACGGCGGCGAGGAGCGCAGGTTCCGGCGGTGGGCGTTCCGGTCGCACAACGC
CACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAAGGGCACGGAGAAGC------------------------------
----CGTGGGCGCCGGGTGGGCTTGGCTACAACAGGCTGTA-------CCTCGACCAGCCCGACGAGCGGTGGGCGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCTTCGGGCAGTGGTTCCTGCAGTCGGCGATGTACTACGAGCGCGGTGCG
GTGATCGGGTGCCACCACTGCCCGGAGCCGAACCGCACGGAGACGGGCTTCTTCGGCGTTTTCCGCCTCGCCGTCAAGAA
CGCCCTCCGCGAGGTCATCGCCCGCT------CCAGCGCCGGCCGGGAGAAGCTGGCGGTGCTGACTACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGCAGCCGTACGCTCCGGGAGAGAAGGAGATGTCG
TACATGCACAAAGAGATGTGGCGGACGGGCGCGGAGGAGGCCATCGCGGCTGCCGTCGAGGCCAGGTCGCGCGGGTCCGC
GGTGACGGTGGAGGCTCTGCAGGTGACGAGGCTCGCGGATATGCGCCCGGACGCTCACCCCGGCCCGTACTTCCATCCCT
TCCCGTTCGCCGGCGCCGGCGGCGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGCACTCGTGCCTCCCCGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTAAAGAGATGGAGAGGTGCCTCCTCCTC------------------
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>chr5D_1290
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----------------------------------------------------------------------------GCTA
CAGGGGCGCCGCCAGGAACCCAGGGGTCGAA---ACCGGCGCCGCAGTGCGACTACTCGGAGGGGGAATGGATTCCGAAC
GCGGCGGGGCCGCGGTACACCGGGACGAGCTGCGGCGCGACGATCAAGCACGAGCAGAACTGCATCGTGAACGGCCGGCC
GGACACGGGGTACCTGAACTGGCGGTGGCGGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCGCTGAGTTCCTGGAGC
TGGTGCGCGGCCGGCACGTCGCGTTCGTAGGCGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGG
TCGGAGTACCCCGTCGAGCTGGTCCTTGACGGCGGCGAGGAGCGCAAGTTCCGGCGGTGGGCGTTCCGGTCGCACAACGC
GACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAAGGGCACGGAGAAGT------------------------------
----CGTGGGCGCCGGGTGGGCTTGGCTACAACAGGCTGTA-------CTTCGACCAGCCCGACGAGCGGTGGGCGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCTTCGGGCAGTGGTTCCTGCAGTCGGCGATGTACTACGAGCGCGGTGCG
GTGATCGGGTGCCACCACTGCCCGGAGCCGAACCGCACGGAGACGGGCTTCTTCGGCGTTTTCCGCCTCGCCGTCAAGAA
CGCCCTCCGCGATGTCATCGCCCGCT------CCAGCGCCGGCCGGGAGAAGCTGGCAGTGCTGACTACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGGAGCCGTACGCTCCGGGAGAGAAGGAGATGTCG
TACATGCACAAAGAGATGTGGCGGACGGGCGCGGAGGAGGCCACCGCGGCTGCCGTCGAGGCCAGGTCGCGCGGGTCCGC
GGTGACGGTGGAGGCTCTGCAGGTGACGAGGCTCGCGGATATGCGCCCGGACGCTCACCCCGGCCCGTACTTCCATCCCT
TCCCGTTCGCCGGCGCCGGCGGCGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGCACTCGTGCCTCCCCGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTAAAGAGATGGAGAGGTGCCTCCTCCTC------------------
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>chr5B_1290
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----------------------------------------------------------------------------GCTA
CAGGGGCGCCGCCAGGAACCCAGGGGTCGAA---ACCGGCGCCGCAGTGCGACTACTCGGAGGGGGAATGGATTCCGAAC
GCGGCGGGGCCGCGGTACACCGGGACGAGCTGCGGCGCGACGATCAAGCACGAGCAGAACTGCATCGTGAACGGCCGGCC
GGACACGGGGTACCTGAACTGGCGGTGGCGGCCGCGCGGGTGCGCGCTCCCGCCGTTCGCGCCCGCTGAGTTCCTGGAGC
TGGTGCGCGGCCGGCACGTCGCGTTCGTAGGCGACTCGCTCGCGCGGAACCAGTGCGAGTCGCTGGTGTGCCTCCTCGGG
TCGGAGTACCCCGTCGAGCTGGTCCTTGACGGCGGCGAGGAGCGCAAGTTCCGGCAGTGGGCGTTCCGGTCGCACAACGC
GACGGTGTCGGTGTTCTGGTCGCCGTTCCTGGTGAAGGGCACGGAGAAGT------------------------------
----CGTGGGCGCCGGGTGGGCTTGGCTACAACAGGCTGTA-------CTTCGACCAGCCCGACGAGCGGTGGGCGGCGG
AGCTCCCGGGCATCGACGTGGTGGTGCTCTCCTTCGGGCAGTGGTTCCTGCAGTCGGCGATGTACTACGAGCGCGGTGCT
GTGATCGGGTGCCACCACTGCCCGGAGCCGAACCGCACGGAGACGGGCTTCTTCGGCGTTTTCCGCCTCGCCGTCAAGAA
CGCCCTCCGCGATGTCATCGCCCGCT------CCAGCGCCGGCCGGGAGAAGCTGGCTGTGCTGACTACGTTCTCGCCGG
CGCACTTCGACGGGGAGTGGGACAGCCCGGACGCGTGCGCGCGCACGGAGCCGTACGCTCCGGGAGAGAAGGAGATGTCG
TACATGCACAAAGAGATGTGGCGGACGGGCGCGGAGGAGGCCACCGCGGCTGCCGTCGAGGCCAGGTCGCGCGGGTCCGC
GGTGACGGTGGAGGCTCTGCAGGTGACGAGGCTCGCGGATATGCGCCCGGACGCTCACCCCGGCCCGTACTTCCATCCCT
TCCCGTTCGCCGGGGCCGGCGGCGAGAAGAAGAGGGAGCGGGTGCCGAACGACTGCGTGTACTCGTGCCTCCCCGGCCCC
ATCGACACGTGGAACGAGATCCTGCTGCAGATGGTAAAGAGATGGAGAGGTGCCTCCTCCTC------------------
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---------------------------------------------------------------
>SNPs
-------------------S------------------------------------------------------S-----
----------------------------------------------S----------S---S------------------
-------S--S-----S----------S----------S-----S--------------S--SSS--S-----S-----S
--------------SS----S--------S--SS---------SS---------SS------------------------
S-SS-----S-S-----------------S---------------S--S-S---S-------------------------
----S--------SSS--------------S------S--------S---S-----------------------------
-----------------S---S---SSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
-----------S------------------SSSSSSSS------S--S-------S----------S-------------
----S---------S---------S-------------------------------------------------------
--------------------------------------S------SSSSSSSSSSS-----S------------------
SS-S-------------------------SS-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------SS--------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------S-----------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------------S----------------------------
-----------------S------------------------------------------S----------------S--
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
------------------------------------------------------S------S------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------SSS---------------------
-------------------------S------S---S-SS--------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_672
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------------GATTGTAAGCGCAGACCCCT------------------------------------------------
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---------------------------------------------------------------
>reverse_2781
--------------------------------------------------------------------------------
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------------------------------------------------------------TGTGGGGAGGTGTAGCGATT
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---------------------------------------------------------------
