>input_sequence_51317
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-----------------------------------------------------GCCGCACAGACTCGAGTCGTCTTCTTC
CTCTGCTCCTGCTCGGATCCCCTACCCTGCTCCTCACCCCAACCCCCCCTCT--CGCGGCGCGGCACGGCAGAGAGGAGT
CGGCGGAGATGTCGGGCGTGACGGCGGACGAGGACAAGAAGCCCGCGGGCGACGGCGGAGGCGCCCACATCAACCTCAAG
GTCAAGGGGCAGGTATGATCCAATCCGATGTCCGCCTTCCCCTCTTTTTCTCTCGATGGAGTACTGGTTCTGTTGGTTGT
GCTGGCGGTCGGATCCTAGGATTGGGGTCGGTGTGGTAGTTTCCAGCTCCGTGCTGTCGATTTAAAATCCGGATCTCTGT
TTCCGCACCGTGGCCGGTTGGTTTGTTTAGATGCGTGGCTCTGTAGTCTGTAGATGCGTGTGCCTAGTCTTGCCA-----
-----ACTGGTGTCCCCTCGTTAGTTCGCACTTGAGGCTCCTGCTGCTCGCCGGTTGCTCTGTCGGCCTGCTTCACCTTT
ATTGGCGCTGTGTTTGTAATGTTTCGAGTCTGCTCCGTCATCGATCTGTAGGCCTACTTAACAGC---------------
------CATAAAGGTGCATTCTTTAGCCACTGGTAGGGTAGGATACGCCCAAATGTGGTCAGTATAGTGAACCAGGGTCC
CCTG---AGTACTAGGCAAAACTTGAGCGCCTGTAATCCTGTTTATTAGTGATTATGATCTTGTTTTCTAATTTTGCATT
GTTATCCAGAAATAAAATTCATATGTTCTTCAGAAAGTATGCCAATACATAACTAGTGCAAGATCAGAAAATAAATTATT
CC------TCGTAGTCAGTTTCACTCCTAAATTTTTTCTCTGCACGTCAAACTTGTAATTGTTTTATATGG-AATAATGG
CAACATGTGTGTACTGAATGCCCAGTTTTTGACACCTGTCTTTAATCTGTTCTGCAGGATGGCAATGAGGTTTTCTTCCG
CATCAAGAGATCCACACAGCTGAAGAAGCTGATGAACGCCTACTGCGACCGTCAGTCTGTGGATCTCAACTCCATTGCTT
TCCTTTTTGATGGTCGTAGGCTCCGTGGTGAGCAGACCCCTGATGAGGTATGCTGTTCAACTTTTGCTGGCAC-GCCGAA
CATTAGAACCTTAACATTCACTAGCTTGATGGTCTGTGCCGTCGTTAATGTATTCTTTGCAAATTGTTTCAGCTTGAGAT
GGAGGAAGGCGACGAGATTGACGCCATGCTTCACCAGACCGGAGGGGGCTTTCCTCGCCCTTAGAAGGAGCTTGC-TGCA
GCCTGGCTGTTCTATGTCGTATGCTACCTTTAGAACTAGAGTAAAATGTAAGAAGTGAAAGAACTTGCGAGGCTATGATT
CTGTGCCATAGCCTGAGGGGGGGTCTGGAGGTGAAAGAACATCGGAGTACTGTTGATGTCGTGACTGAACTATCATCCAT
TGCCTAATATATCATGCCTTGTTGT-------------------------------------------------------
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>chr3D_1_TraesCS3D01G419300
TACCCACGGTCAGGCGAACAAACGAACACCTCTCTTCAACGCGCCACACCGTCCGAAGTAGGCTTCTCGGGTGCCTCGCC
GGCATTGCATTGAAGCGGCGGCGCCCGCTGGCTCGTTCGGTCGCGTCACTCTGGCCGTCATCAATTTCGTGGAGTCATGT
CCGTTCTGGAGTGGCCTGATCGGCATGAATACGCTTCGTGTAGAGAGGGTTTTCGGTAAGGCGTGGCGGACGTCCGGTCT
CCCGCTTACCTTCTCCTTGGTTTGTGTCCGGTTGCAAGGTTTCGGACACGCGAACGCGTGAACGGACTGACGGGTCACCG
CGTTGGATAGCTTGCAGCGTTTGATCACGT-GGTCCAGACATTTGCGAGCATTTTGAGGGTTCACTTTGGAGATGCCCTG
ATACATGAGTTCCCGCTAACAATCT------TTACCTTTTTCATTTAACTTAAGCTTAGCCTGCATTTCATTCCGCTGAG
GA-TTTTCGTATCACAATTTTCGATTGGCCAATTGTACACTCAAATGTTTTGCCGTATGTGATGTTTAA---ATAAAAAT
AAAATGCCTTGACGGACATTCTAGACAAAAAAATG-CTTTCAAAACAAGCAAAGAACAATCTCGCAAAAGAATAAATTCG
TCTTGTAATCCAACTTT-TGTTTGAAGGGAGAAGAAATTCCAAATACTATCATCGTTCCCCGGGAAGACACTAGAATAAA
TAGAGTCATGCGTACCCGAAAGAAAAAAAGGAGTCATGCGCACACACGTTCGGGCGATAGCGGGAGGGGGATCGGCACCC
CTTCATTTCAAAAGGGAATCGGGCCTTGACCTGGTCTGCGTGCAAAGTACGCGCACTTCACACCCGATCCGTGTCACGAG
CAGTCCCCGGCGCGCCGGCCAATCCCACGCGCGGCCCACAGGGTTCCCGCGCAGGGAGGATCCGGACGCCAAGCAACTAT
TAAACCCGGCTCTGGGTGGCCGCGCTATAAACCTCGCCTGCCCCCTCGGGTCCGCCGCACAGACTCGAGTCGTCTTCTTC
CTCTGCTCCTGCTCGGATCCCCTACCCTGCTCCTCACCCCAACCCCCCCTCT--CGCGGCGCGGCACGGCAGAGAGGAGT
CGGCGGAGATGTCGGGCGTGACGGCGGACGAGGACAAGAAGCCCGCGGGCGACGGCGGAGGCGCCCACATCAACCTCAAG
GTCAAGGGGCAGGTATGATCCAATCCGATGTCCGCCTTCCCCTCTTTTTCTCTCGATGGAGTACTGGTTCTGTTGGTTGT
GCTGGCGGTCGGATCCTAGGATTGGGGTCGGTGTGGTAGTTTCCAGCTCCGTGCTGTCGATTTAAAATCCGGATCTCTGT
TTCCGCACCGTGGCCGGTTGGTTTGTTTAGATGCGTGGCTCTGTAGTCTGTAGATGCGTGTGCCTAGTCTTGCCA-----
-----ACTGGTGTCCCCTCGTTAGTTCGCACTTGAGGCTCCTGCTGCTCGCCGGTTGCTCTGTCGGCCTGCTTCACCTTT
ATTGGCGCTGTGTTTGTAATGTTTCGAGTCTGCTCCGTCATCGATCTGTAGGCCTACTTAACAGC---------------
------CATAAAGGTGCATTCTTTAGCCACTGGTAGGGTAGGATACGCCCAAATGTGGTCAGTATAGTGAACCAGGGTCC
CCTG---AGTACTAGGCAAAACTTGAGCGCCTGTAATCCTGTTTATTAGTGATTATGATCTTGTTTTCTAATTTTGCATT
GTTATCCAGAAATAAAATTCATATGTTCTTCAGAAAGTATGCCAATACATAACTAGTGCAAGATCAGAAAATAAATTATT
CC------TCGTAGTCAGTTTCACTCCTAAATTTTTTCTCTGCACGTCAAACTTGTAATTGTTTTATATGG-AATAATGG
CAACATGTGTGTACTGAATGCCCAGTTTTTGACACCTGTCTTTAATCTGTTCTGCAGGATGGCAATGAGGTTTTCTTCCG
CATCAAGAGATCCACACAGCTGAAGAAGCTGATGAACGCCTACTGCGACCGTCAGTCTGTGGATCTCAACTCCATTGCTT
TCCTTTTTGATGGTCGTAGGCTCCGTGGTGAGCAGACCCCTGATGAGGTATGCTGTTCAACTTTTGCTGGCAC-GCCGAA
CATTAGAACCTTAACATTCACTAGCTTGATGGTCTGTGCCGTCGTTAATGTATTCTTTGCAAATTGTTTCAGCTTGAGAT
GGAGGAAGGCGACGAGATTGACGCCATGCTTCACCAGACCGGAGGGGGCTTTCCTCGCCCTTAGAAGGAGCTTGC-TGCA
GCCTGGCTGTTCTATGTCGTATGCTACCTTTAGAACTAGAGTAAAATGTAAGAAGTGAAAGAACTTGCGAGGCTATGATT
CTGTGCCATAGCCTGAGGGGGGGTCTGGAGGTGAAAGAACATCGGAGTACTGTTGATGTCGTGACTGAACTATCATCCAT
TGCCTAATATATCATGCCTTGTTGTGTTCCCAATGATTTGCAAACTCATTTGGTTTCTCATCGTAGCGAGGCATCATTTT
CTGTCTTGTGTACTGTTG-------------TGTGTACTGTTGTTTTTTGGCATGCCCTGTTTTTGGCGGTGAGCAACAG
TGTTTGTTTGCCGATAACACATTGCAGCAGTGCCAAAAGGTTCAGCAGCCAGCAAATCGAACAGTGTTTGGTTGCCGATA
ACACATTGCAGCAGTGCCAAAAGGGTCAGCAGCCAGCAAATCGTTGATCAACTTGCTTCCTTGTTAATCGGACACACGTA
GGTTGCTGTAGGGTAGAAAGTTCAGAAGTTTGTAGTTTTGGGCTGAGCTGCGTGACTCACCGACAACGGGGACCCACTGT
TGTGGGTGCGGTGG-------TTTGGAGGATGCAGATTAGTACTCCCTCCGTTCT--------GAATTACTTGTCTCAGA
TTTACTCATTTTAGTG------------CTAGATACATCCGTATCTAGAGAAATAGATTTACTCATTTTAGTGCTAGATA
CATCCGTATCTAGAGAAATCTAAGACAAGTAATTTGGA------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGGCAAGATGAGACGACAGCTG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CTCTTTGAAGAATACATGTCTCAT--CAAATAAGG
TTCCTGAAATCTATTCCTTCTAAAAAAAATTGAGTACTTCTGTTTGTTAAAAATAATCAGACAGATCGAGCACCTTTGTC
CCAGTTTCAATTCCTCATAAGTTTTAAAATTCATCTGTGGTTGAATAATTGATGCCAGTCTTCGCATATGAGATTTTGTC
TGAAGTCAAACTTTATAAGTGTGGCCATATAATATGAAATAATATCAACATCTACAATACCAAAGTTTGAAATATGAAGT
AATATCAACACCTACAATACTAAGCGTGAAAATTAACTCCATTACGCATCTAATGATAGAATGTTGATATTTTTCTCTAT
GAGACTTTAGACAAAACTTGTATATGA---------------------------------------ATCCAATGCATTGC
TGCTTAGGTGAGGTGCTAAGTTCTACCAACTAATTTTTGCAATGTATAAG
>chr3B_1
TACCCGCGGTCAGGCGAATGAACGGACACCTCTCTTCAATGCGCCACACCGTCCGGAGTAGGCTTCTCGGGTGCCTCGCC
GGCATTGCATTGAAGCGGCGGCGCCCGCTAGCTCGTTCGGTCGCGTCACTCTGGCCGTCATCAATTTCATGGAGTCATGT
CCGTTCTGGAGCGGCCTGACCGACATGAATATGCTTCGTGTAGAGAGGGTATTCGATAAAGCATGGCAGACGTTCGGTCT
TCCGCTTACCTTCCCCTTGGTTTGTGTTCGGTTGCGAGGTTTCGGACACGCGAACGCGTGGACGGACCGATGGGTCACCG
CGTTGGATAGTTTGCAGCGTCCGATCACGTCGGTCCGGATGTTTGCAGGCATTTTGAGGGTTCAAGTTGAAGATGCCCTT
ATTCATGAGTTCCCGCTAATAACCTCATTCTTTACCTTTTTCATTTGACTTAAGGGTAGTCTGCATTTCATTCTGCTGAT
GATTTTTCGTACCGCAACTTTCGATTGGCCAATTGTAAACTCAAATGTTTCGCCGTATGTGATGTTTAATAAATAAAAAC
AAAACGCCTTGACGGACGTTCTAGACAAATAA-ATTCTTTCAAAACAAGCAAAGAACAATCTCGCAAAAGAATAAATTT-
------------ACTTT-TGTTCGAAGGGAGAAG---------------------------------ACACTAGAATAAA
TAGAGTCATGCGTACCCGAAAAAAAAAG-GGAGTCATGCGCACACACGTTCGGGCGATAGCGGGAGGGGATG-GGCACCC
CTTCATTTCAAAAGGGAATCGGGCCTTGACCTGGTCTGCGTGCAAAGTACGCGCAGTTCACACGCGATCCGTGTCCCGAG
CAGTCCCCGGCACGCCGGCCAATCCCACGCGCGGCCCACAGGGTTCCCGCGCAGGGAGGATCCGGACGCCAAGCAACTAT
TAAACCCGGTTCTGGGTGGCCGCGCTATAAACCTCGCCTGCCCCCTCGGGTCCGCCGCACAGACTCGAGTCATCTTCTTC
CTCTGCTCCTGCTCGGATCCCATACCCTGCTCCTCAACCCCCTTCGCGGCGCGGCGCGGCGCGGCACAGCACAGAGGAGT
CGGCGGAGATGTCGGGAGTGACGGCGGACGAGGACAAGAAGCCCGCGGGCGACGGTGGAGGCGCCCACATCAACCTCAAG
GTCAAGGGGCAGGTATGATCCAATCCGATGTCCGTCTTCCCCTCTTTTTTTCTCGATGGAGTACTGGTTCTGTTAGTTGT
GCTGGCGGTCGGATCCCAGGATTGGGGTTGGTGTGGTAGTTTCCAGCTCCGTGCCGTCGATTTAGAATCCGGATCTCTGT
TTCTGCTTCGAGGCCGATGGGTTTGTTTAGATGCGTGGCTCTGTAGTCTGCAGATGCGTGTGCCTAGTCTCGCCGAC---
-------TGGTGTCCCCTCGTTAGTTCGCACTTGAGGCTCCTGGTGCTCGCC----------------------------
----GCGCTGTGTTTGTAATGTTT-GAGTCTGCTTCGTCATCGATCTGTAGGCCTACTTAACAGTCATATAGGCCTACTT
AACAGTCATAAAGGTGCATTCTTTAGCCACTGGCAGGGTAGGATACGCCCAAATGTGGTCAGTATAGTGAACCTA-----
-------AGTACTAGGCAAAACTTGAGCTCCTGTAATCCTGTTTATTAGTGATTATGATCTTGTTTTCTAATTTTGCATT
GGTATTCAGAAATAAAATTCATATGTACTTCAGAAAGTATGTCAATACATAACTAGTGCAAGATCAGAAAATAAATTGTT
TTATTGCTTCGTAGTCAGTTTCAGTCTTAATTTTTTTCTCTGCACATCAAGCTTGTAATTGTTTTATATGGGAATAATGG
CAACATGTGTGTATTAAATGCCTAGTTCTTGACACTTGTCCCTAATCTGTTCTGCAGGATGGCAATGAGGTTTTCTTCCG
CATCAAGAGATCCACACAGCTGAAGAAGCTGATGAACGCTTACTGCGACCGTCAGTCTGTGGATCTCAACTCCATTGCTT
TCCTTTTTGATGGTCGTAGGCTCCGTGGTGAGCAGACCCCTGATGAGGTATGGTCTTCAACTTCTGCCGGCAC-GC----
CATTAGAACCTTGACATTCACTAGTTTGTTAGTCTATGCCGTTGTTGATGTATTCTTTGCAAATTGTTTCAGCTTGAGAT
GGAGGAAGGCGACGAGATCGACGCCATGCTTCACCAGACCGGAGGGTGCTTTCCTGGCCCTTAGAAGGAGCTTGC-TGCA
GCCTGGCTGTTCTATGTCGTATGCTACCTTTAGAACTAGAGTAAAATGTAAGAAGTGAAAGAACTTGTGAGGCTATGGTT
CTGTGCCATAGCCTGAGGGGGGGTCTGGAGGTGAAACAACATCGGAGTACTGTTGATGTCGTGACTGAACTATCATCCAT
TGCCTAATATATCATGCCTTGTTGTGTTCCCAGTGATTTGCAAACTCATTTGGTTTCTCATCGTAGTGAGGCATCATTTT
CTGTCTTGTGTACTGTTG-------------T------------TTTCTGGCATGCCCTGTTTTTGGCGGTGAGCAACAG
TGTTTGTTTGCCGATAACACATTGCAGCAGTGCCAAAGGGTTCAGCAGAGTTGCACAACGATTTGCTG------------
------------------------------------------------------GCTTCCTTGTTAATCGGACACACATA
GGTTGCTGTAGGGTAGAAAGTTCAGAAGTTTGTATTTTTGGGCTGAGCTGCGTGACTCAACGACAACAGGGATGCACTGT
GGTGGGTGCGGTGG-------TTCGGAGGATGCAGATGAGTAGTATTCCTTCCGTTCGGAACGGAATTACTTGTCGAAAA
ATGGACATCTATGACTAATAAAATACGTCTAGATACATTCGTTTCTTGGACTAAAATACAT------------CTAGATA
CATTTATTTACGGAGTGAGTAGATGGCAAGAACTTGTCGAGAAATGGATGTATCTATAATTAAAATACATTTAGATACAT
TTCATTTCTAATACATTTAGATTTGAACGAGTAATTCTGAATGGAGTGAGTAGAATACATCTAGATTTGAACGAGTATTT
CTAATGCATCTAGATTTGAACGAGTAATTCTGAACGGAGTGAGTAGATGGCAGGATGAGACGAGCCGGAAAGAATTCTAT
GAGATCAGGTCTCATGGATTAGTAGGTGAGACCCATCCTGATGGATGACAAGTGACATTCATAAATCACAAAGCATCCAC
CTCACCTCCAGCTGAAATTAAGGGAGAGGGGAAGAGAAATTAGATGCTTTGTGATTTGTGAATGCCACGTGTCATCCATC
AGGACGGATCTTACCCGTGAGACCTGGTCTTATATAATTTTTTCTCTCTCTGAAGAATACAAGTCTTAT--CAGA-----
--------------------------------------------------------------AGATCGAGCACCTTTGTC
CAAGT---------------------AAATCCGTCCGTGGTTGAATAATTGATGCCAGTATCCGCATATGAGATTTTGTC
TGAAGTCGAACTTCATAAGTTTGAGCATATAATATGAAATAATATCAACACCTACAATACTAA-----------------
-----------------------GCGTGAAAATTAACTCCACTACGCATCTAATGATAGAATGTT-ATTTTTTTCTCTAT
CAGACTTTAGACAAAACTTGTATATGA---------------------------------------ATCCAATGCATTGC
TGCTTAGGTGAGGTGCTAAGTTCTACCAACTAATTTTCACAATGTATAAG
>chr3A_182
GGCATTATA-----------------------------------------------------------------------
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--------------------------------GCTTCGTGTAGACATGGTTTTCGATAAGGCGTGGCGGACATCCAGTCT
CCCGCTTACCTTCCCCTTGGTTTGTGTCCGGTTGCGAGGTTTTGGACACGCAAACGCGTGAACGGACCGACGGGTCACCG
TGTTGGATAGCTTACAGCGTCCGATCACGTCGGTCAAGACGTTTGCAAGCATTTTGAGGGTTCACTTTGAAGATGCCCTG
ATACATGAGTTCCTGCTAATAA------TCTTTACCTTTTTCATTTAACTTAAGCGTAGCCTGCATTTCA-------GAG
GA-TTTTCGTATCACAACTTTCGATTGGCCAATTGTACACTCAAATGTTTCGCCGTATGTGATGTTTAA---ATAAAAAC
AAAATGCCTTGGCACATGTTCTAGACAAAAAAAATTCTTTCAAAACAAGCAAAGAAGAATCTCGCAAAAGAATAAATTCG
TGTTGTAATCCAACTTTTTGTTTGAAGGGATAGGAAATTCCAAACATTTTTC---TTCCCCGGGAAGACATTAGAATAAA
AAGAGTA----------------------------ATGCGCACACACGTTCGGGCG------GGAGGGGGATCCGCACCC
CTTCATTTCAAAAGGGAATCGGGCCTTGGCCTGGTCTGCGTGCAAAGTACGCGCACTTCACATGCGATCCGTGTCGCGAG
CAGTGCCCGGCACGCCGGCCAATCCCACGCGCGGCCCACAGGGTTCCCGCGCAGGGAGGATCCGGACGCCAAGCGACTAT
TAAACCCGGCTCTGGGTGGCCGCGCTATAAACCTCGCCTGCCCCCTCGGGTCCGCCGCACAGACTCGAGTCGTCTTCTTC
CTCTGCTCTTGCTCGGATCCCCTACCCTGCTCCTCACCCCA-CCCCGCCTCT--CGAGGCGCGGCACAGCACAGAGGAGT
CGGCGGAGATGTCGGGCGTGACGGCGGATGAGGACAAGAAGCCCGCGGGCGACGGCGGAGGCGCCCACATCAACCTCAAG
GTCAAGGGGCAGGTATGATCCACTCCGATCTCCGTCTTCCCCTCTTTTTTTCTCGATGGAGTACTCGTTCTGGTAGTGAT
GGTGGCGGTCGGATCCTAGTTCGTAGTGTAG---------TTCCAGCTCTGTGCTATCGATTTAGAATCCGGATCTCTGT
TTCTGCTCCGTGGCCGATTGGTTGTTTTAGATTCGTGGCTCTGTAGGCTGCAGATGCGTGTGCCTAGTCTCGCCGACAGC
CGCCGACTGGTGTCCCCTCGTTAGTTCGCACTTGAGGCTCCTGGTGCTCGTCGGTTGCTCTGTCGGCCCGCTTCACCTGT
ACTGGCGCCGTGTTTGTAATGTTT-GTGTCTGTTCCGTCATCGATCTGTA---------------------GGCCTACAT
GACAGTCATAAATCTGCATTCTTTAGCCACTGGTAGGGTAGGATACGCCCAAATGTGGTCACTGTAGGGAACCAGGCTCC
CCTAAGTAGTACTAGGCAAAACTTGAGCTCCTGTAATCCTGCTTATTGGTGATTATGATCTTGTTATCTAATTTTGCATT
GGTATTCAGAAATAAAATTCATATGCTCTTCAGAAAGTATGTCAATACATAACTAGTGCGTTTTA---------------
TTATTGCTTCGTAGTCAGTTTCAGTCCTAATTGTTTTCTCTGCACATCAAGCTTGTAATTGTTTTATATGGGAATAATGG
CAACATGTGTGTACTAAATGCCTAGCTCTTGACACTTGTCCCTAATCTGTTCTGCAGGATGGCAATGAGGTTTTCTTCCG
CATCAAGAGATCGACACAGCTGAAGAAGCTGATGAACGCCTACTGCGACCGTCAGTCTGTGGATCTCAACTCCATTGCTT
TCCTTTTCGATGGTCGTAGGCTCCGTGGTGAGCAGACCCCTGATGAGGTATGCTGTTCAACTTTTTGCCAGCATGCCTAA
CATTAGAACCTTAACATTCACTAGGTTGATGGTCTGTGCCGTCGTTGATGTATTCTTTGCAAATTGTTTCAGCTGGAGAT
GGAGGAAGGCGACGAGATCGACGCCATGCTTCACCAGACCGGAGGGTGCTTTCCTCGCCCTTAGAAGGAGCTTGCTTGCA
GCCTGGCTGTTCTATGTCGTATGCTACCTTTAGAACTAGAGTAAAATGTAAGAAGTGAAAGAACTTGTGAGGCTATGGTT
CTGTGCCATAACCTGA--GGGGGTCTGGAGGTGAAAGAACATCGGAGTACTGTTGATGTCGTGACTGAAGTATCATCCAT
TGCCTAATATATCATGCCTTGTTGTGTTCCTAGTGATTTGCAAACTCATTTGGTTTCTCATCGTAGTGAGGCATCATTTT
CTGTCTTGTGTACTGTCGTGTGTACAGTTGTT------------TTTTTGGCATGCCCTGTTTTTGGCGGTGAGCAACAG
TGTTTGTTTGCCGATAACACATTGCAGCTGTGCCAAGGTT----------------------------------------
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-----CTGTAGAGTAGAAAGTTCAGAAGTTTGTAGTTTTGGGCTGAGCTGCGTGACTCACCGACAACAGGGATGCACTGT
GGTGAATGCGGTGGTTTGGACTTTGGAGGATGCAGATTAGTGGCAAGATGACACGACGGCTTCCCCGCAAAAAAAAAAA-
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---------------------------------------------------AAGATGACACGACGGCTG-----------
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---------------------------------------------CTCTCTGAAGAATACAAGTCTCATACCAAATAAGA
TTCCTGAAATCTAATCCTTAT-AAAAAAATTGAGTACTTCTGTTTGTTAAAAATAATCAGGCAGATCGAGCACCTTTGTC
CCAGTTTCAATTCCACATAAGTTTTAAAACTCGTCTGTGGTTGAATAATTGATGCCA-----------------------
--------AACTTCACAAGTTTGACCATATAATATGAAATAATATCGACATCTACAATACTGAAGTTTGAAATATGAAGT
AATATCAACACCTACAATACTAAGCATGGAAATTAAATCCATTACGCATCTAATGATAGAATGTTGATATTTTTCTCTAT
CGGACTTCAGACAAAACTTATATATGCAGAGTAAAAAGAATAGAAGGGAGTATGCCATAAAGCTTCATCCAACGCATTGC
TGCTTAGGTGAGGTGCTAAGTTCTACCAACTAATTTTGGCAATGTATAAG
>SNPs
-----S------------SS----S--------------S---------------S------------------------
-----------------------------S--------------------------------------S-----------
-----------S-------S--S--------S-----------------------S------------------------
-------------S---------------------S-------------------------------S------------
--------------------SS------------------S-----S----------------------S----------
-------------------S--S--------------------------------S-----------------S------
-----------------S--------------------------------S----------------------------S
-----------------S---------------SS---------------------------------------------
-S------------------------------------------S-S-S-SSSSS-------------------------
---------------------S-----SS---------------------------------------------------
---------------------------------------------------------------S-----------S----
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-------------------------S---S--------
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----------------------------------S--------------S------------------------S-----
----------------------------S-----------------------------------S---------------
---S--S---------S---------------------------------S-------------------S---S-----
-------------------------------------------S------------------------S---------S-
-S----------------------S---------------------------------------S---------------
----------------------------------------------------------------------------S---
---S------------------------S---------------------------------------------------
-S---S-----------------------------------S-----------------------------------S--
SS---------------------S------S--------------S----S-----------------------------
---------------S------S----S-------S----SS--------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S---------S--
------------------------S---------------------S---------------------------------
------------------S---------------------------S---------------------------------
-------------------------------------------------------------------S---------S--
--------------------------------------------------------------------------------
--------------------------------S---------------------------------S-------------
--------------------------------SSSSSSSSSSSS------------------------------------
-------------------------------------S----------SSSSSS-SSSSS-SSSSS-SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S--
-------------------------------------------------------------------S----SS------
S-----------------------------------------S-SSSS-SSSS----------------------SS-S-
S-SSSSSSS-S-SSSS----------------------S---S---S-SSSS-S-SSSSSSSSSSSSSSSSSS-------
---SSS-S-SSS---SS-SSSS-SSSS-SS--S---SS------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
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-------------------------------------------------S-----------S-----------------S
-------------S-----S-S--------------------------------------S-------------------
--------------S-----------------S--------------------------S-S------------------
-------S-----S------S--S------------------------------------S-------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-------------------------------------S------------
>forward_276
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----------------TTGGTTTGTGTCCGGTTGCA--------------------------------------------
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>reverse_1309
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----------------------------CGGTGTGGTAGTTTCCAGCT--------------------------------
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>forward_1250
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------------------------------TCCGCCTTCCCCTCTTTTTC------------------------------
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>reverse_2725
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----ATTGCAGCAGTGCCAAAAGG--------------------------------------------------------
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