>input_sequence_51299
--------------------------------------------------------------------------------
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-----------ATGGCGACGAGGGTGTGGGCGGCGTCGGCGGCGGCCTTAAACCCCACTCTCCTCCCCCTCTCGTCTTCC
CCACGTCCGAGCAGGCCCGCCCCCTCCACGCGGCCGAGCGGGCACCTCCGCCTGCGCAGCCGCCCGCCGCGGCCGGCCAG
GGTCGTGTGCCGCCGCGCCAAGAACGCCGCCTTGGAGGACTACAAGTTCCCGGACCCCATCCCCGAGTTCGCCGAGCAGG
TCAGCGACCCCCTGCCTCCCTTCCCCCCTGCATCTTCTGCTCGGGACGGAGCTGCCGCTCCCGCTCCCGCTTCAGCTTCG
TTCTGTTGTGTGTGACCGA-TTCGTGCGGCCTGTGGCCGGTGTCTTCTCTGTTGTCTCCCAGGAGACGAGCAAGTTCAGG
GAGCACATGACGTGGCGGCTGGAGCAGAAGAAGGAGGAGTACTTCGGGGAGCACGTGGAGGACATCGTCGACGTCTGCAC
CGAGGCACGTTTCCCAGCTTCCACGGTTAACTT-GCTCTCGTTCTACTAGTAGCATTTTGGCATTCTTGGA---------
-----------TGCAACTGCCTGCGTTTATCGGAGCTGTGATTTAGGTTAAGAATTTGGCATTGCGTCAACGATGGTTAA
AGGA-ATGGTTCTATTTGCTAAGA---------------------------TAGTTGAGAAAGTGTAGACTAGATAGAA-
TTGACACCGATAATAAGAAC------------GAAATTAATGAGCAAAGCTGGTGTCATGAATTAGCTTGGGAATGAACA
TTAGAAAATCATTGCCTCTTTTCTTAAGAAGCTAAACCTTTTCATGATGGTTCAGATGGACGCTTGCATTCTTCGTTAGA
GACCGGCAAAGTAGCTCAAATTGCCAAACTTCATATGTGTTGGTACGAAGCATCTTTATTCTCTAGATACTGCAGGTAAG
ATTACAATTGG-------TTGGGAGTAGAAACTGCAGGCCCATGACACCGTGCAAT---GTATGCAAGTAAACATGAGGA
CGGCTGTCGTCCATTAGTTTTGTCAGTTGCCACCAGTTAACTACAACTCACACTTA-GCTTAGCTCGAATTCGAATTCTC
TCACTGCATGTTCACATGCTATTATTTCTACCAGTCTTCA----GTTCAGCATATGTTAGGCTTAGAAGGAC---CTTCA
AGAGTGATGCAGTTGCTTATGTTGGCGACAGTTCAATGGTTTCTTTCTTCGCGAAAAGGCGACAGTTCAATGTTTGATGT
GATAGCACACCGCACTAGGCTTTCAGCTTGTCCGATAGAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GAAATCTCTGAGGCGTGATTCTG
ATTTCCAGGTCTTGAGCACTTTCTTGCAACATGAGTACTGCGGACCCGGGACGCTCCTGGTTCACCCCTTCTTGGACATG
AAGGGCGAGATCAAAGAGAGGGGCCTCCCCGGCGCGCCTCAGGCCGCGCGCGCCGCGATCGCGTGGGCTGAGAAGAACAT
CGACAAAGACTGGAAGGAGTGGACCGGAGATTATTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr5B_1_TraesCS5B01G199200
AAAAGGCTC---TACGTGCTAATTCGATTCACTGAGAGACTTTTTTCAGTAGAACGCATTTTTTATACTATCTAGTACTA
TTACGCACTACCTCTTTTCTTAAATACAAGACATTTTTGCAGTTCAATTT--ACAGAGGTAGTAATATATAAAGGGTGTG
GCTAGGTCTTAATGGACTGAGGCTTAACTAAGTCTCAGTCAAGTGATATATTATGTAAGAAGAAAAAGAAAAACTGAATA
TATTTTTTCTATGAATCTCAATGCAAAAGTAAAGGAAGATAGCATCGACTGAGACTTAGCAAAACTGATATACAAAATCT
ATAAAGGTGCAAGTTTTGTTGGG-----AAAAATTAAGCTTGGATCACATAACTTGAGTTAACTATTATTTTTTTGATAG
CTTACCATTGTTGCCGCATGATAAACATTAAGCTTGAGTTTGAGTGTTTTTTTTAGGGAAGACCGTCGTGGCTAACTTTA
TGAATAAACATCGATATATCGGCCAT-AGCTTGTTCACCAGCACTCTGACGGCTCGTCAGTCCAACTAAAAGAAAGCTTA
TTACAATAACTAAAATTGATTAGCACATGTGCCGATTGGTTTGCAGAT-TAAAACAATGTTTAGAAATGACCTTCTCAAT
CAAAGTAGAGATATTCACACATTCCGCAAAAATTGCTGCCGCGGAGCCCCACCAAGCCGGAGCAACATTTGGCCACCGAT
AGTCGATAGAGCGTTCCGCACAAATTTCTTAAACACAAGGATTGTGAATTTTTTTTACTTTTATTTTTTGCGGGTGGA--
--------------------------TTGTGAAATTTGTTATGTGAATTGTTAGCGTTATATGTGTCACTCCATTCCCTC
CATAATCCTAGCCTTGCCTGTAGGATCGGACGGTGTGCCTCAGCCGAAAATCCCACACAAG--AAAAAAAAGGC---TCT
GCCTA-TGCTTTACCCTGCCACAATAGTCTTGAACCGATAAGGAGG-----CGACCGTAAAACCCCGGAGACGAGCGCCC
CGAGCAGCGAGATGGCGACGAGGGTGTGGGCGGCGTCGGCGGCGGCCTTAAACCCCACTCTCCTCCCCCTCTCGTCTTCC
CCACGTCCGAGCAGGCCCGCCCCCTCCACGCGGCCGAGCGGGCACCTCCGCCTGCGCAGCCGCCCGCCGCGGCCGGCCAG
GGTCGTGTGCCGCCGCGCCAAGAACGCCGCCTTGGAGGACTACAAGTTCCCGGACCCCATCCCCGAGTTCGCCGAGCAGG
TCAGCGACCCCCTGCCTCCCTTCCCCCCTGCATCTTCTGCTCGGGACGGAGCTGCCGCTCCCGCTCCCGCTTCAGCTTCG
TTCTGTTGTGTGTGACCGA-TTCGTGCGGCCTGTGGCCGGTGTCTTCTCTGTTGTCTCCCAGGAGACGAGCAAGTTCAGG
GAGCACATGACGTGGCGGCTGGAGCAGAAGAAGGAGGAGTACTTCGGGGAGCACGTGGAGGACATCGTCGACGTCTGCAC
CGAGGCACGTTTCCCAGCTTCCACGGTTAACTT-GCTCTCGTTCTACTAGTAGCATTTTGGCATTCTTGGA---------
-----------TGCAACTGCCTGCGTTTATCGGAGCTGTGATTTAGGTTAAGAATTTGGCATTGCGTCAACGATGGTTAA
AGGA-ATGGTTCTATTTGCTAAGA---------------------------TAGTTGAGAAAGTGTAGACTAGATAGAA-
TTGACACCGATAATAAGAAC------------GAAATTAATGAGCAAAGCTGGTGTCATGAATTAGCTTGGGAATGAACA
TTAGAAAATCATTGCCTCTTTTCTTAAGAAGCTAAACCTTTTCATGATGGTTCAGATGGACGCTTGCATTCTTCGTTAGA
GACCGGCAAAGTAGCTCAAATTGCCAAACTTCATATGTGTTGGTACGAAGCATCTTTATTCTCTAGATACTGCAGGTAAG
ATTACAATTGG-------TTGGGAGTAGAAACTGCAGGCCCATGACACCGTGCAAT---GTATGCAAGTAAACATGAGGA
CGGCTGTCGTCCATTAGTTTTGTCAGTTGCCACCAGTTAACTACAACTCACACTTA-GCTTAGCTCGAATTCGAATTCTC
TCACTGCATGTTCACATGCTATTATTTCTACCAGTCTTCA----GTTCAGCATATGTTAGGCTTAGAAGGAC---CTTCA
AGAGTGATGCAGTTGCTTATGTTGGCGACAGTTCAATGGTTTCTTTCTTCGCGAAAAGGCGACAGTTCAATGTTTGATGT
GATAGCACACCGCACTAGGCTTTCAGCTTGTCCGATAGAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GAAATCTCTGAGGCGTGATTCTG
ATTTCCAGGTCTTGAGCACTTTCTTGCAACATGAGTACTGCGGACCCGGGACGCTCCTGGTTCACCCCTTCTTGGACATG
AAGGGCGAGATCAAAGAGAGGGGCCTCCCCGGCGCGCCTCAGGCCGCGCGCGCCGCGATCGCGTGGGCTGAGAAGAACAT
CGACAAAGACTGGAAGGAGTGGACCGGAGATTATTAGCGCGCCGATTTCCTTTTGCCACTCTTTGTCTCTGTTGTAGCAG
CTGTTTGTTGTACCTGTAGTA------GTTTCGATATTTCAGTAGAGACTTGAATCTAGCTA--GATTCTAGACTAGCCA
TGTTACTCCGATCTCGAACCCGTGAAACGCATGAAGTGAATTTATGCTCTGAACTTGATGAAGGCTGCTGGA---CTGAT
CCGTTCCGTCTCTTCTCTTAATCATGATGAACATGTCTTGGTGGCTGCCTGGCAGTAGTTGGTTGAAAAAAACTTGCTGG
TTTTTGCCACATGTGACAGGAATACTTTCTTTGCCTTGGCCACTGTAAGTCAGTAGTAGTAGCA--TAGCAGTAAGTTTC
TAAGGCGGCAGGTGGTCAGACCCTAGCCCAACCGGGCAAGAAATCCATGGCATTTCCCTGGCGCGACAGGAGCGGGGGCA
CGCACCA--CACCGCAACGACATGTTGCGCAGGTGCGAACCTAAGTCCCTCTCGCCGGAGACCGGTCGACGCCGGCCTGC
GCCGTCTATTGTCCACAGTTCATTCAGTGTGGGAGAGAAGGACCGGACGGTGGAGTGCGGAGCTCCTTTTGTTGGATGCC
ATGTCCGTATGCAGTCAGTCGGAAGGGGGCCATGCCATTGAAGGAGCGCAG-----GGGGCGACGTAGCAGGAGGAGGTG
TACATG-------------------GTTGATGATTTCTTCCTGAAATGGCGCCGAGCCCGCGCTCTGACGGATCGTCGAC
GTGAGCTCTGTTCGCGCGTCGCCGCTGGCAATGGCATGCGCGCACGCTGGCTCCACTGTTTGTGCGATCTACG----AGT
GTTTATCATGATGCATATGCATAGCT--------CTGCCGCTGGACTGGAGTGTGGCGCGGCCCGTGAGCGCCTCAATGG
CAGCTTGGATCCATCCCCATTAAGATGGCGGTCACATTGGTGTGATGGCGTGG-CCTCGATCGATCTCCTGTTAATTTTC
TTCTTCCCAGTTCCTAATGACAGTGGTGTATATATGCAGTAAGTTTTCC
>chr5A_1
AAAAGGCTCTAGTACGTGCTAATTCGATTCACTGAGAGACATTTTTCAATAGAACACATTTCTTATATTATCTAGTACCA
GTACGTACTACATCTTTTCTTAAATATAAGACGTTTTTGCAGTTCAATTTCAACAGAGGTGGTCATATATAAAGTGAAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGTAAGTTTTGTTGGCAAAATAAAAATTCAGCTTGGATCACATAACTTGAGTTAAGT----TTTTTTTGTTAG
ATTACCATTTTTTCCAACTGGTAAAGATTAAACTTGAGTTCAGTC----TTTTTAGGGAAGGCCATCATGGCTAGCTTTA
TCGATCGAACTTGATACATCATCCATGAGCTTGCTCACCAGCATTTGGA-GGCTCGTCAGTCCAACTAGAAGAAAACTTA
TTACAATAACTAAAATTAGCTAGCACATATGTCGCTTGATTTGCAGATCTAAAACAATGTTTAAATATAACCTTTCCAAC
AAAGATAAAGATATCCACACATTCCACAAAAATTGCTGCCGCCGAGCCCCATCAAGCCAGAGCAACATTTGACCTTCGAC
TCGCTGGAGCACAAGTTTC----------TAAACACAAGGATTGTGAAATTTGTTATGTGAATTGTTAGCTGGAAGCCTG
GAACACAACTTTCTTAAACACAAGGGTTGTGAAATTTGTTATGCGAATTGTTAGCGTTATATGTGTCACTCCATTCCCTC
CAAAATCCTAGCCTTCCCTGTTGGATCGGACGGCGTGCCGCAGCTGAAAATCCCACACAAAGAAAAGAAAAGGCTCCTCT
GCCTAGTGCTTTACCCTG----AATAGTCTTGAACCGATAAGGAGAGGAGACGACCGTAAAACCCCGGAGAGGAGCGCCC
CGGGCAGC--GATGGCGACGAGGGTGTGGGCGGCGTCGGCGGCGGCCTTAAACCCCACTCTCCTCCCCCTCTCGTCTTCC
GCACGTCCGAGCAGGCCCGCCCCCTCCACGCGGCCGAGCGGGCACCTCCGACTGCGCAGCCGCCCGCCGCGGCCGGCCAG
GGTCGTGTGCCGCCGCGCCAAGAACGCCGCCTTCGAGGACTACAAGTTCCCGGACCCCATCCCCGAGTTCGCCGAGCAGG
TCAGCGACCCCCTGCCTCCCTCCCCCCCTGCGTCTTCTTCT---------------------------------GCTTCG
TTCTGTTGTCTGTAACCGATTTCGTGCGGCTTGTGGCCGGTGCCTTCTCTGTTCTGTCCCAGGAGACGAGCAAATTCAGG
GAGCACATGACGTGGCGGCTGGAGCAGAAGAAGGAGCAGTACTTCGGGGAGCACGTGGAGGACATCGTCGACGTCTGCAC
CGAGGCACGTTACCCAGCTCCCACGGTTAACTTTGCTCTCGTTGTACTGCTAGCATTTTGGCATTCTCCGATGGTATAAT
GTAGTTTTTGCTGCAACTGCCTGCGTTTATCGGAGCTATGATTTAGGTTAAGAATTTGGCATTGCGTCAACGATGGTTAA
AGGA-ATGGCTATGTTTT-CAAGATAGTTGGGAAAGAGAAAATTCAAAAAGTAGTTGGGAAAGTGTAGACTAGGTAGATT
TTGACACTGATAATAAGAACATCTGTGGTTTGGAAATTAAGGAGCAAAGCTGATGCCATGAATTAGCTTGGGAATGAACA
TTAGAAAATCAATTG---------------------CCTCTTCCTGATAGTTCAGATGGACGC-TGCATTCTTCTGTAGA
GACCAGCAAAGTAGCTCAAATTGCTTAAGTTCATATGTGTTGGTACGAAGCATGTTTA-------GATACTGTAGGTAGG
ATTACAATTGGTTGGGACTTGGGAGTAGAAATTGCAGGTACAGGACACCGTGCAATGCAGTATGCAAGTAAACATGAGGA
CGGCTGTCGTCCATTGGTTTTGTCAGTTGCCACCAGTTAGTTACAACTCGCAACCTCGCTTAGCTCGAACTCGAATTCCC
TCACTGTATGTTCACATGCTATTATTTCAACCAGTCTTCATTCAGTTCAGCATATGTTAGGCTTAGTAGGAC---C---A
AGAGTGATGGAGTTGCTTATGTAGGCGACAGTTCGATG----------------------------------TTAGATGT
GACAG--CACCGCACTACGCTTTCAGCTAGTCCACTAGAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GAAATCTCTGAGACGTGATTCTG
ATTTCCAGGTCTTGAGCACGTTCTTGCAACATGAGTACTGCGGACCCGGGACGCTCCTGGTTCACCCCTTCTTGGATATG
AAGGGCGAGATCAAAGGGAGGGGCCTCCCCGGCGCGCCTCAGGCTGCGCGCGCCGCCATCGCGTGGGCTGAGAAGAACAT
CGACAAGGACTGGAAGGAGTGGACCGGAGATTTTTAGCGCTGATTTCCT------------TTTGTCTCTGCTGTAGCAG
CTGTTTGTTGTACCTGTAGTAGTAGTAGTCTCGATGTTTCAGTAGAGACTTGAATCTAGCTATAGATTCTAGACTAGTCA
TGTTAATCCGATCTGGAGCCCGTGAAACGCATGAAGTTAATTTATGCTCTGAACTTGATGAAGGCCGGCCTGATCCTGAT
CCGTTCCTTCTTGAACATATTCC---------------------------------------------------------
----TGCCACATGTGGTAAAAACTAGCAAAGCTTTTTTCAAGCAACTGCTGCCAGCCAAGTAGTAGTAGCAGCAAGTTTC
TAACGCGGCAGGTCGTCAGATCCTAGCCCAGCCGGGCAAGAAATCCATGGCATTTCCCTGGCGCGGCAGGAGCGGGGGGC
ACCACACGGCACCGCAACGACATGGTGCGCAGGTGCGAACTTAAGTCCCTCTCGCCGGTGACCGGTCAACGCCGGCCTGC
CCCGTCTGTTGCCCACAGTTCATTCAATGGCCGC-----------------GGAGTGCGGAGCTCCTTTTGTTGGATGCC
ATGTCCGTATGCAGTCAGTCGGAAGGGGGCCATGCCATTGAAGGAGCGCAG-----GGGGCGACGTAGCAGGAGGAGGGT
AGGGGGGAGGTGTACATGGTTGAATGTTGATGGGTTCTTCCTGAAATGGCGCCGAGCCCGCCCTCTGACGGATCGCCGAC
GTGAGTTCTGTTCGCGCGTCGCCGCTGGCGCTGGCATGCACGCACGCTAGCTCCACTGCTTGTGCGATCTACG----AGC
GTTTATCATGATGCATATGCATAGCT--------CTGCCGCTGGACTGGAGTGTGACGCGGCCCGTGAGCGCCTCAATGG
CAGCTTGGATCCATCCCCATTAAGATGTCAGTCACATTGGTGTGATGGCGTGGCCCTAGACCGATCTCCTGTTAATTTTC
TTCT-CCCAGTTCCTAACGACAGCCCTGTATATATAT-GTAAGTTTT--
>chr5D_787
--------------------------------------------------------------------------------
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--------------------------TTGTGATATTTGTCATGTAAATTGATAGCGTTATATGTGTCACTCCATTCCCTC
CAAAATCCTAGCCTTGCGTGTTGGATCGGACGGTGTGCCGCAGCTGAAAATCCCACACAAAGAAAAGAAAAGGC---TCT
GCCTAGTGCTTTACCCTGTCATAGTCTT----AACCGATAAGGGGAGGAGACGACCGTAAAACCCCGGAGAGGA------
---GCAGC--GATGGCGACGAGGGTGTGGGCGGCGTCGGCGGCGGCCATAAACCCCACTCTCCTGCCCCTCTCGTCTTCC
CCACGTCCGAGCAGGCCCGCCCCCTCCACGCGGCCGCCCGGGCACCTCCGCCTGCGCAGCCGCCCGCCGCTGCCGGCCAG
GGTCGTGTGCCGCCGCGCCAAGAACGCCGCCTTCGAGGACTACAAGTTCCCGGACCCCATCCCCGAGTTCGCCGAGCAGG
TCAGCGACCTCCTGCCTCCCTCTCCCCCTGCGTCTTCTTCTCGGGACGGAGCTTCCGCTCCC------------GCTTCG
TTCTGTTGTGTGTGACAGATTTCGTGCGGCTTGTGGCCGGTGTCTTCTCTGTTCTGTCCCAGGAGACGAGCAAGTTCAGG
GAGCACATGACGTGGCGGCTGGAGCAGAAGAAGGAGCAGTACTTCGGGGAGCACGTGGAGGACATCGTCGACGTCTGCAC
CGAGGCACGTCACCCAGTCTCCACATTTTAGTACTTTGAATTGAGCAGAGTTTCTGTCAAGGGTTCTTGAGTAGTCGAGT
CACATGGTTTAGGTTA--------------------------------TAAGAATTTGTTGTTGCCCCGACAATGGTGAA
AGAAGATTGCTGTGTTTT-TAAGA---------------------------TAATCGAGAAAGTTTAGAC----TAGAA-
TTGACACTGATAAGAAGAAAATCTGTGGTTTGGAAATTGATGAGCAAAGCATATGCCATGAATTAGCCCGGGAATGAGCA
TTAGAAAACTATTGTCGTGTTTCTGTCT-----------------------------------TTGCATTCTTCGGTAGA
GACCGGTAAAGTAGCTCAAATAGCCAAAGTTCATATGTGTTGGTACGAAGCATCTTTATCTTTAGA------TAGGTAAG
ATTGCAATTGT-------TTGGGAGTAGAAACTGCAGGCCCATGACACCGTGCAATG---TATGCAAGTAAACATGAGGA
CGGCTGTCGTCCATTGGTTTTGTAAGTTGCCACCAGTTAGTTACAACTCGCAACCTCGCTTAGCTCGAACTCGAATTCCC
TCACTGTATGTTCACATGCTATTATTTCAACCAGTCTTCATTCAGTTCAGCATATGTTAGGCTTAGTAGGACCTTC---A
AGAGTGATGGAGTTGCTTATGTAGGCGACAGTTCGATG----------------------------------TTAGATGT
GACAG--CACTGCACTACACTTTCAGCTAGTCCGCTAGATGAAATCTCTGAGATGTGATTCTGATTTGCAGGTCTTGGGC
ACGTTCTTGCAACATGAGTACTGCGGACCCGGGACGCTCCTGGTTCACCCATTCTTGGACATGAAGGGCGAGATCAAAGA
GAGGGGCCTCCCTGGCGCGCCTCAGGCCGCACGCGCCGCCATCGCGTGGGCTGAGAAGAACATCGACAAGGACTGGAAGG
AGTGGACCGGAGATTATTAGCGCCGATTTCTTTTTGCCACTCTTTGTCTCTGTTTTAGCAGCCGTCTGTTGTACCTGTAG
TAGTTTCGATGTTTCAGTACAGACTTGGGTCTAGCTAGATTCTAGACTAGTCATGTTAGTCCGATCTGGAGCCCGTGAAA
CGCATGAAGTGAATTTATGCTCTGAACTTGATGAAGGCTGCTGGACTGATCCGTTCCGTTTCTTCTCTGAATCTGTGATG
AACATGTCTTGGTGGCTGCCTGGCAGTAGTTGGTTGAAAAAAACTTGCCGGTGCCACATGTGGCAGGAATACTTTCTTTG
CCTTCACCACTGTAAGCAAGTAGTAGTAGCAGTAAGTTTGTCACGCGGCAGGTCGTCAGGCAGGAGCGGGGGCACCGCAC
CGCAACGACATGCTGCGCAGGTGCAGAAGATGTTAGGCTTCGAAGGACCTTCAAGAGTGACGCAGTTGCTTATGTAGGCG
ACAATTCGATGTTAGATGTGACACCACTGCACTACACTTTCAGCTAGTCCGATAGATGAAATCTCTGAGACGTGATTCTG
ATTTCCAGGTCTTGAGCACGTTCTTGCAACATGAGTACTGCGGACCCGGGACGCTCCTGGTTCACCCCTTCTTGGACATG
AAGGGCGAGATCAAAGAGAGGGGCCTCCCCGGCGCGCCTCAGGCCGCGCGCGCCGCCATCGCGTGGGCTGAGAAGAACAT
CGACAAGGATTGGAAGGAGTGGACCGGAGATTATTAGCGCTGATTTCCT------------TTTGTCTCTGCTGTAGCAG
CTGTTTGTTGTACCTGTAG---TAGTAGTCTCGATGTTTCAGTAGAGACTTGAATCTAGCTAAAGATTCTAGAGTAGTCA
TGTTAATCCGATCTGGAGCCCGTGAAACGCATGAAGTTAATTTATGCTCTGAACTTGATGAAGGCCGGCCTGATCCTGAT
CCGTTCCTTCTTGAACATATTCC---------------------------------------------------------
----TGCCACATGTGGTAAAAACTAGCAAAGCTTTTTTCAAGCAACTGCTGCCAGCCAAGTAGTAGTAGCAGTAAGTTTC
TAACGCGGCAGGTCGTCAGATCCTAGCCCAACCGGGCAAGAAATCCATGGCATTTCCCTGGCGCGGCAGGAGCAGGGGGC
ACCACACGGCACCGCAACGACATGGTGCGCAGGTGCGAACTTAAGTCCCTCTCGCCGGTGACCGGTCAACGCCG------
-------------CACAGTTCATTCAATGGCCGC-----------------GGAGTGCGGAGCTCCTTTTGTTGGATGCC
ATGTCCGTATGCAGTCAGTCGGAAGGGGGCCATGCCATTGAAGGAGCGCAGCGCAGGGGGCGACGTAGCAGGAGGAGGTG
TGCATG-------------------GTTGATGGTTTCTTCCTGAAATGGCGCCGAGCCCGCGCTCTGACCGACCACCGAC
GTGACTTCTGTTGGCGCGTCGCCGCTGGCATGCGC--GCACGCACGCTAGCTCCACTGCTTGTGCGATCTACGTACGAGT
GTTTATCATGATGCACGCATAGCTTGCTCTGCCGCTGGCGCTGGACTGGGGTGTGACGCGGCCCGTGAGCGCCTCAATGG
CAGCTTGGATCCATCCCCATTAAGATGTCAGTCATATAGCTGTAATGGCGTGGCCCTCGATCGATCCCCTGTTAATTTTC
TTCTTCCCAGTTCCTAATGACAGTCGTGTATGCATGTAGTAAGTTTT--
>SNPs
----------------------------------------S-------S------S-----S-----S----------S-
S----S-----S--------------S-----S---------------------------S--S----------S-SS-S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--S------------S------------S--------------------------S-SSSS--------S---
S--------S--S--SSS--S----S-----S--------SSSSSSSSS------------S--S--S------S-----
-SS--SS-SS-S----S---SS-----------S---------S-SS--S------------------S------S----
-----------------SSS--------S--S--S---S------------------------S-S--S-----SS---S
S--SS--S------S----------S----------------S--------S------S------------S--SS---S
SSS-SSS--SS-SSSSSS-SSSSSSSSSS-------------------S---S--SSS-SSSS-S--SSSS--SS-SS--
--------------------------------------------------------------------------------
--S------------------S-----------------S----S---------------S-----S-------------
------------------S--S-----------------------S-------------------------S--------
--S-----SS----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------S---------S------S--------------S--------SSSSSSSSSSSS------
------------------------------S----------------------S-S------------------------
------------------------------------S-------------------------------------------
-----------S-------------------------------S------------------------------------
-------------------------------------S------------------------------------------
---------S-S-S---SS------------------------------------------------------S------
-------S--------------------------------------------S--S------------------------
--------------S-SSS-----SSSSSSSSSSSS---S---S----S--------------------------S----
----------------------------S------------------------------SS-SSS-------S-------
--------------------------------------------------------------------------------
---------------S-----------------------SS--------S--SSSS-------------S--------S-
------S---------------------S-------------------------------------S---------SSS-
---------S------------S-----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----
--S--SS----------S----------S-----S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------S------------------------------------------------------------
--------------------------------------------------------S-----------------------
------S---------------------------------SSSSS-SSSSSSSSSSSSSSS----------S--------
-----------------------------S-----S-----------------------------------------S--
-----S--------S--S-------------------S---------------------------S-SSSSS--------
-------S---SSSSSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----------SS-SS--SSSSSSSSSSSSS--SSSSS-SSSSSS-SSSSSSS-SSSSSS----------------
---S---------S------S--------------------------------------------S------------SS
SS---SS-----------------S---------------S-----------------S--------S------------
S------S---S--------------S--SSS-SSSSSSSSSSSSSSSSSS-----------------------------
--------------------------------------------------------------------------------
-S------------------------------S------------------------------------------S----
-----S------------------------S--------S--------S---------S---------------------
-------------------------------------------------------S------------------------
---------------------------S-S--------------------------------------------------
------------------------S-----------S----------SS
>forward_549
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCTCGTCAGTCCAACTAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_1532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TCCCAGCTTCCACGGTTAAC-------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_1477
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GCTGGAGCAGAAGAAGGAGG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_3631
--------------------------------------------------------------------------------
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------------------------------TTGCCTTGGCCACTGTAAGT------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
