>input_sequence_51294
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATGGGGCACCACTCCT
GCTGCAACAAGCAGAAGGTCAGGAGGGGCCTGTGGTCGCCGGAGGAAGACGAGAAGCTCGTCAAGTACATCACCGCGCAT
GGCCATGGCTGCTGGAGCTCAGTCCCAAGACAAGCTGGTACGTGCGT--GCGTGCGGATT----CTCTGCTGCTTCAGTT
CCACCAGCTAGCTAGCTGT-GTTCTTGATCACTCACTTTCTGCATTGCTGAATATGTGTGTGTTCATCTTCATTCGTGCG
CGCAGGGCTGCAGAGGTGCGGCAAGAGCTGCAGGCTGAGGTGGATCAACTACCTGAGGCCGGACCTCAAGAGGGGAAGCT
TCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAACAGGTAAACCTTCCTGCTCTGCTCCAGC
TTGAATGCATGCATGGTGTTT-GCCCCTACCCTACATGCAAATCAGCTCTGCATAGCTGCTGTAACTTCATTCCCCTGTA
C-----ACATGACAGTTACTTATCTGTGCGTCTGCATGGCCTACACGCGACGCGCGTAGTGCAAAATCACATT----AAC
TTGCTCGAGAAAAGGAATGAAAGGGACACAAATGGCAACAGATTGAGCTAATACCAAAATGTGCGCTGTGCGCTGTGCTT
TGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGACAATGAGGTGAAGAACTTTTGGAACTCC
ACAATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTCCGGTAACATCCCTTCCTCTGCAGGTAACTGGTA
GTAGATCATGTACTAGTAACTACTCC--AGTACGTAGGAAA----TTGCAGAGCCACTAGTTAATTTTCTCTTCCAAAAG
AACCATCTAATCTGACACCAAACATGTACGTAGTGGTACACTAGTACTTACCGTACGTACTAACTCGGAGTTACTATGTC
GTTTTTGGTACAGATTTGTACTACAACATTCTGGATGGGGCGGGACAAGGCATCGCAGCTGCGGGGTGCGCGTCGCTCAA
CGGGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGCCCCCTCCATCCTCCGCGGCATGGCTCAATTTCACCTCTCAGC
CGCTGCTCCTCCCCGTCCACGGCGCCGTCCCCGGCTGCGACCTCCAGTACACCGTCGACGGGGAGTTCATCAGGCTGTGC
CGCGAGGCGGCTAATGCTTGCCCGGAGAACGGCGCCTCTAGCCTCTTGGCTCAAGAAGGCGCGGCTGATCGGAGCTGCCT
CCCGGTGTTCGCCGAGCCAAAGGGCGCCGGCGCTTACGCCGCCGATCCGGGCATGGGTCCGGTAGCGGACTTCATGGACG
CCATCCTAGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAGCTTCTCCGCGAACACCGGCATGCAGCTC
CACTGGGTTCCCTGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G251600
TGTGCATGTCCTCGAGCCTGAG----CTTCTTGCAGCCCTTTGCTCCTCGTC------TCTCTTTGGAAATTGGCAGGGC
GCACACAGGGCGATCCCAAATCTCGACCTTTC--TACCAAAGCTGAACGAATGAATGCACGCGGACACATTGCTTTCTGT
ATATATACAAAGTGACACAGTCGCAAAAAAAAAGTGATACAGTCCCAGAGGTAAATTAGTTTCCCGAAGGGTGCATGTGG
CAC-GTAAGAACAACGCGCTAAAGAAGTAAAGAGCACAGAAAGACTATTTAAGGATAGGGCAGCACACATATATAGATGA
AGGGTCAGAACGCGCAAATGGACC---ATTACATATCTTCTTGACGAATTGATACTAGTCCAAATGGTAGCTGCTGCTGC
TGCTGCAGGCCATGTACTCTGAAGAAAGCGGGGCGGGCAGTTATGGGCGTACTGCATGCAGGCAGTGAATTTTCTGCTTA
TGCAAATTGATT-ACACACTACTGTAATGTACACATTCACAGCCAGGCATCGATGGATCGGAGACGCACAGTACAAGAGT
TCCCAAAACCAGCCAGGCATAGGGGCACAGCCCCATCACACAAGTCTTCTCTCATAACGCAGGGGGTGGAGCGTGGAAGT
ACCGAAACGCCCCTCGCCCGGTAGTCTAGTCCAGTCACGCCTCATCGCCTTAGGCCCTCACTCGAGCCACTCACTTTTGA
AGTAACCTATGTAACATGCTGCTCACGAGTAGGTTCGACGGGGGCCCGTGCTAGATGGATACTAGATAGGAAGGAAGGAG
TAGGGCTCGACAGGTTTAGGTCCAACTTTTCCTCCCCGTGCTTTTCATCTGCCTGCCCTTAGATGTATCCATTGCATTGC
ATTGCATGCATGCACACTCGCCACATTGCCCTCTCTCA---TCTCATCCCATCTTCTTTATAACCATGTACTCCTACCAG
TGCAGCAGCTCAAGCAGCCTGCCGTCAGTGTGAA----GTAGTAGTTGAGTGAGAGGAGAGGAGATGGGGCACCACTCCT
GCTGCAACAAGCAGAAGGTCAGGAGGGGCCTGTGGTCGCCGGAGGAAGACGAGAAGCTCGTCAAGTACATCACCGCGCAT
GGCCATGGCTGCTGGAGCTCAGTCCCAAGACAAGCTGGTACGTGCGT--GCGTGCGGATT----CTCTGCTGCTTCAGTT
CCACCAGCTAGCTAGCTGT-GTTCTTGATCACTCACTTTCTGCATTGCTGAATATGTGTGTGTTCATCTTCATTCGTGCG
CGCAGGGCTGCAGAGGTGCGGCAAGAGCTGCAGGCTGAGGTGGATCAACTACCTGAGGCCGGACCTCAAGAGGGGAAGCT
TCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAACAGGTAAACCTTCCTGCTCTGCTCCAGC
TTGAATGCATGCATGGTGTTT-GCCCCTACCCTACATGCAAATCAGCTCTGCATAGCTGCTGTAACTTCATTCCCCTGTA
C-----ACATGACAGTTACTTATCTGTGCGTCTGCATGGCCTACACGCGACGCGCGTAGTGCAAAATCACATT----AAC
TTGCTCGAGAAAAGGAATGAAAGGGACACAAATGGCAACAGATTGAGCTAATACCAAAATGTGCGCTGTGCGCTGTGCTT
TGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGACAATGAGGTGAAGAACTTTTGGAACTCC
ACAATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTCCGGTAACATCCCTTCCTCTGCAGGTAACTGGTA
GTAGATCATGTACTAGTAACTACTCC--AGTACGTAGGAAA----TTGCAGAGCCACTAGTTAATTTTCTCTTCCAAAAG
AACCATCTAATCTGACACCAAACATGTACGTAGTGGTACACTAGTACTTACCGTACGTACTAACTCGGAGTTACTATGTC
GTTTTTGGTACAGATTTGTACTACAACATTCTGGATGGGGCGGGACAAGGCATCGCAGCTGCGGGGTGCGCGTCGCTCAA
CGGGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGCCCCCTCCATCCTCCGCGGCATGGCTCAATTTCACCTCTCAGC
CGCTGCTCCTCCCCGTCCACGGCGCCGTCCCCGGCTGCGACCTCCAGTACACCGTCGACGGGGAGTTCATCAGGCTGTGC
CGCGAGGCGGCTAATGCTTGCCCGGAGAACGGCGCCTCTAGCCTCTTGGCTCAAGAAGGCGCGGCTGATCGGAGCTGCCT
CCCGGTGTTCGCCGAGCCAAAGGGCGCCGGCGCTTACGCCGCCGATCCGGGCATGGGTCCGGTAGCGGACTTCATGGACG
CCATCCTAGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAGCTTCTCCGCGAACACCGGCATGCAGCTC
CACTGGGTTCCCTGAGTTACTGGTTGGGGATATTTGGGTAGGTGTATGTATGGCCTGATCTAGCAGTTGGCTTCCT-AAA
TTATATATATACTCCTAGCTGATGATGGAATAATTACCTCATGTACGTTTCCTAGGGTATACTACTGTGCTAGTATTTAC
ATGAGTTACGTGTAAATATATATTGTAGGAA----TTATATATGTTGTTATGAGTATATATATCATGCTTGTCCGTGTGC
CGAAGAAGAAACTTCTGATTAGCTACACCACATATAGTTTTGTATGCTTCGATGTGTACAGCCGGAGGCACGTACCCGAT
ATGCATGCATAGAGACATGCATGACGGTGGGAATATATAGTGTATGCATGAGCTATAGCTGCGCAAATTATACATACTCC
TATCGTCAAGCATTATCATCTTCCTTCCTATCTTATGAGAGGATGTTTTTGAAGATTCACTCGTGCAGTAACCGGTGCTA
AACATGCTGAAATTGTTATATCTGTCAGGTGTAAGCAGT---ATAACAAATAAACAGTGTC--------A-CTGCAAAAC
ATCTCCCACCCTCATCAGCTTTGAAAGTAAAAATAAAGGTGTTTGGAGCCCACGGGTTTCACTGAAATGAAACCTCTGTT
GGTAGGCCAAGGTTGATCCACGCAGGCGTCTTGTTTCCAGAAGAACTGAGTTAATTCGCTGTCTGCAGAAACTGACCAGA
ACGGCAAAACCGCAACCGTTCAACTGCCAATCACACGGCACGGGCGTAGGTAAAAGACGGGACTGCGCTACAGTCCTGCA
AATGTCTCTGCCGCGGATCGAGCGGCCCGCAGGTTCGCGCGCTCCGGAGGGCTGCTGGTCGGTCACGGGGCCGTTGCACG
AAAGGCACAACCGCACAAGGCGTCATCATGACTTTGATAAAGAGAGGGGCATGGCATGGCATCCGGACGCGCAAATTCCC
CGTTCCATTTGCGGCTGAACAGGCCATAGATTCTACACTGCACAACAGCAACGTATCATGGTGTCACGAAAC
>chr3B_1
TGTGCATGTCCTCGAGCATGAG----CTTCTTGCAGCCCTTTGCTCCTCGTCTTAATTTCTCTTTGGCAATTGGCAGGGC
GCACACAGAGTGATCCCAAATCTCGACCTTTTTTTGCCAAAGGTGAATGAATGAATGCACGCGGACGCGTTGCTTTCTGT
ATATGTAC----------------------AAAGTGATGCAGTCGCAGAGGTAAATTCGTTTCCTCAAGGGTGCATATGG
AAC-GTAAGAACAAGACGCTAAAGAAGTAAAGAACGCAGAAAGACTATTTAAGGATAGGGCAGCACACATATATAGATGA
AGGGTCAGAACGCGCAAATGGGCC---ATTACATATCTTCTTGACGAATTGATACTAGTCCAAATGGTA------GCTGC
TGCTGCAGACCATGTACTCTGAAGAAAGCG----GGGCAGTTATGGGCGTACC----GCAGGCAGTGAAATTTCTGCTTA
TGCAAATTGATC-ACACACCAC-----TGTACACATTCACAGGCAGGCAT----------------CACAGTACAAGAGT
TCCCAAAACCAGCCAGGCATAGGGGCACAGCCCCATCACACAAGTCTTCTCTCATAACGCAGGGGGCGGAGCGTGGAAAT
ACCGAAACGCCCCTCGCCCGGTAGTCTAGTCCAGTCACGCCTCATCGCCTTAGGTCCTCACTCGAGCCACTCACTTTTGA
AGTAACCTATGTAACATGCTGCTCACGAGTAGGTTGGACGGGGGCCCGTGCTAGATGGATACGAGTAGAT-AGGAAGGAG
TAGGGCTCGACAGGTTTAGGTACAACTTTTCCTCCCCGTGCTTTTCATCTGCCTGCCCTTAGATGTAGCGATTGCATTGC
ATGCATCGCATGCACACTCGCCACATTGCCCTCTCTCTCTCTCTCATCTCATCTTCTTTATAACCGGT------------
-------------GCAGCCTGCAGTGAGTGTGA--------GTAGTTGAGT-----GAGAGGAGATGGGGCACCACTCCT
GCTGCAACAAGCAGAAGGTCAGGAGGGGCCTGTGGTCGCCAGAGGAAGACGAGAAGCTCGTCAAGTACATCACGGCGCAT
GGCCATGGCTGCTGGAGCTCAGTCCCAAGGCAAGCTGGTACGTGCGT--GCGTGCGGATT----CTCTGCTGCTTCAATT
CCACCAGCTAGCTAGCTGTTGTTCTTGACCACTCACTTTCTGCATTGCTGAATATGTATGTGTCCATCTTCATTCATGCG
CACAGGGCTGCAGAGGTGCGGCAAGA-------GCTGAGATGGATCAACTACCTGAGGCCGGACCTCAAGAGGGGAAGCT
TCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAACAGGTAAACCTTCCTG--CTGCTCCAGC
TTGAATGCATGCATGGTGCTTTGCCCCTACCCTACATGCAAATCAGCTCCGCATAGCTGCTGTAACTTCATTCCCCTGTG
CTGTGTACATGACAGTTACTTATCTGTGCGTCTGCATGGCCTACACGCGACGCGCGTAGTGCAAAATCACATT----AGC
TTGCTCGTGACAAGGAATGAAAGGGACACAAATGGCAACAGATTGAGCTAATACCAAAATGCGTGCTGTGCGCTGTGCTT
TGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGACAATGAGGTGAAGAACTTCTGGAACTCC
ACCATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTCCGGTAACATCCCTTCCTCTGCAGGTAACTGGTA
GTAGATCATGTACTCGTAACTACGGAGTAGTACGTACGAAA----TTGCAGAGCTACTAGTTAATTTTCTCTTCCAAAAG
AACCATCTAATCTGATACCAAACAT----GTAGTGGTACACCAGTACTTACCGTACGTACTAACTCGGAGTTACTATGTC
GTTTTTGGTACAGATTTGTACTATAACATTCTGGATGGGGCGGGACAAGGCATCGCAGCTGCGGGGTGCGCGTCGCTCAA
CGGGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGCCCCCTCCGTCCTCCGCGGCATGGCTCAATTTCACCTCCCAGC
CGCTGCTCCTCCCCGTCCACG------TCCCCGGCTGCGACCTCCAGTACACCGTCGACGGGGAGTTCATCAGGCTGTGC
CGCGAGGCGGCTAATGCTTGCCCGGAGAACGGTGCCTCTAGCCTCTTGGCTCAAGAAGGCGCGGCTGATCGGAGCTGCCT
CCCGGTGTTCGCCGAGCCAAAGGGCGCCAGCGCTTTCGCCACCGATCCGGGCATGGGTCCGGTGGCGGACTTCATGGACG
CCATCCTCGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAGCTTCTCCGCGAACACCGGAATGCAGCTC
CACTGGGTTCCCTGAGTTACTGGTTGGGGGTATTTGGGTAGGTGTATGTATGGCCTGATCTAGTAGTTGGCTTCCT-AAA
T----TATATACTCCTAGCTGATGATGGAATAATTACCGCATGTACGTTTCCTAGGGTATACTGCTGTGCTAGTATTTAC
ATGAGTTACGTGTAAATATATATTGTAGGAAGGAATTATATTTGTTATTATAAGTATATATATCATGCTTGTCCGTGTGC
CGAAGAAGAAACTTCTGATTAGCTATACCACATATAGTTTTGTATGCTTCGATGTGTACAGCCGGAGGCACGTACCCGAT
ATGCATGCATAGAGACATGCATGACGGTGGGAATATATAGTGTATGCACGAGCTATAGCTGCGCAAATTATACATACTCC
TATCGTCAAGCATTATCATCTTCCTTCCTATCTTATGAGAGGATGTTTTTGAAGACTCACTCGTGCAGTAACCGGTGCTA
AACATACTGAAATTGTTATATCTGTCAGGTGTAAGCAGC---ATAACAAATAAACAGTGTCAAGTGTCAA-CTGCAAAAC
ATCTCCCGCCCTCATCAGCTTTGAAAGTAAAAATAAAGGTGTTTGGAGCCCACGGGTTTCACTGAAATGAAACCTCTGTT
GGTAGGCCAAGGTTGATCG--GCAGGCGTCTTGTTTCCCAAAGAACTGAGTTAATTCGCTGTCTGCAGAAACTGACCAGA
ACGGCAAAACCGCAGCCGTTCAACTGCCAATCACACGGCACGGGCGTAGGTAAAAGACGGGACTGCGCTACAGTCCTGCA
AATGTCCCTGCTGCGGATCGAGCGGCCTGCAGGCTCGCGCGCTCCGGAGAGCTGCTGGTCGGTCACGGGGCCGTTGCACG
AAAGGCACAACCGCACAAGGCGTCATCATGACTTTGATAAAGAGAGGGGCATGGCCAC----CCGGACGCGCAAATTCCC
CATTCCATTTGCGGCTGAACAGGCGATAGATTCTACACTGCACAACAGCAACGTATCACGGTGTCACGAAAC
>chr3A_1
TGTGCATGTCCTCGAGCCTGAGCTTCCTTCTTGCAGCCCTTTGCTCCTCGTCTT----TCTCTTTGGCAATTGGCAGGGC
ACACACAGGGCGATCCCAAATCTCGACCTTTC--TGCCAAAGCAGAATGAATGAATGCACGCGGACACATTGCTTTCTGT
ATATATACAAAGTCGC----------AAAAAAAGTGATGCAGTCGCAGAGGTAAATTGGTTTCCCGAAGGGTGCATGTGG
GCATGTAAGAACGGCATGCCAAAGAAGTAAAGAGCAGGGAAAGACCATTTAAGGCTAGGGCAGCACACATATATAGATGA
AGGGTCAGAAGGCGCAAATGGGCCGCCATTACATATCTTCTTGACGAATTGATACTAGTCCAAATGGTAGCTGCTGCA--
---TGCATGCCATGTACCGCAGGCAGT---------------------------------GGCAGTGAAATTTCCGCTCA
TGCAAACTGGACTAATCAACAC-----ACTGCACACTCACAGGCATGGATCGGAGG--------CGCACAGTACAAGAGT
TCCCAAAACCAGCCAGGCATAGGGGCACAGCCCCATCACACAAGTCTTCTCTCATAACGCAGGGGGTGGAGCGTGGAAGG
ACCAAAACGCCCCTCGCCCGGTGGTCTAGTCCAGTCACGCCTCATCGCCTTAGGCCCTCGCTCGAGCCACTCACTTTTGA
AGTAACCTATGTAACATGCTGCTCACGAGTAGGTTGGACGGGGGCCCGTGCTAGAT------------------------
-AGGGCTCGACAGGTTTAGGCCCAACTTTTCCTCCCCGTGCTTTTCATCTGCCTGCCCTTAGATGTGGCCATTGCATTGC
ATTGCATGCATGCACACTCGCCACATTGCCCTCTCTCA---TCTCATCTCATCTTCTTTATAACCAGT------------
-------------GCAGCCTGCGGTGAGTGTGAACTGTGTAGTAGTTGAGTGAGGAGAGAGGAGATGGGGCACCACTCCT
GCTGCAACAAGCAGAAGGTGAGGAGGGGCCTGTGGTCGCCGGAGGAAGACGAGAAGCTCGTCAAGTACATCACCGCGCAT
GGCCATGGCTGCTGGAGCTCAGTCCCAAGACAAGCTGGTAGGTGCGGGGGCCTGCGGATTCGACCTCTGCTGCTTCAGTT
CCACCAGCTAGCTGGCTGT-GTTCTTGACCACTCACTTTCTGCATTGCTGAATATGTATGTGTTCATCTTCATTCATGCG
CGCAGGGCTGCAGAGGTGTGGCAAGAGCTGCAGGCTGAGGTGGATCAACTACCTGAGGCCGGACCTCAAGAGGGGGAGCT
TCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAACAGGTAAACA-TCCTC--CTGCTCCAGC
TTGAATGCATGCATGGTGCTT-GCCCCTACCCTACATGCAAATCACCTCTGCATAGCTGCTGTAACTTCATTCCCCTGCA
C-----ACATGACAGTCACTTATCTGTGCGTCTGCATGGCCTACACGCAAAGCGAGTAGTTTGAAATCACATTAGCTAGC
TTGCTCGAGAAAAGGAATGAAAGGGACACAAATGGCAGCAGATTGAGCTAATGCCAAAATGTGTGCTGTGCGCTGTGCTT
TGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGACAATGAGGTGAAGAACTTCTGGAACTCC
ACCATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTACGGTAACATCCCTTCCTCTGCAGGTAACTGGTA
GTAGATCATGTACTAGTAACTACTCC--AGTACGTACGAAATTGCTTGCAGAGCTACTAGTTAATTTTCTCTTCCAAAAG
AACCGTCTAATCTGACACCAAACATGTA--TAGTGGTACACCAGTACTTACCGTACGCACTAACTCGGAGTTACAATGTC
GTTTTTGGTACAGATTTGTACTACAACATTCTGGATGGGGCGGGGCAAGGCATCGCAGCTGCGGGGTGCGCGTCGCTCAA
CGCGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGTCCCCTCCATCCTCCGCGGCATGGCTCAATTTCACCTCCCAGC
CGCTGCTCCTCCCCGTCCACGGCGCCGTCCCCGGCTGCGACCTCCAGTACACCGTCGACGGGGAGTTCATCAGGCTGTGC
CACGCGGCGGCCAATGCTTGCCCGGAGAACGGCGCCTCTAGCCTCTTGGCTCAAGAAGGCGGGGCTGATCGGAGCTGCCT
CCCGGTGTTCGCCGAGCCAAAGGGCGCCGGCGCTTTCGCCGCCGATCCGGGCATGGGTCCGGTGGCGGACTTCATGGACG
CCATCCTCGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAGCTTCTCTGCGAACACCGGCATGCAGCTC
CACTGGGTTCCCTGAGTTACTGGTTGGGGGTATTTGGGTAGGTGTATGTATGGCTTGATCTAGTAGTTGGCTTCCTGAAA
T----TATATACTCCTAGCTGATGATGGAATAATTACCTCATGTACGTTTCCTAGGGTATACTACTGTGCTAGTATTTAC
ATGTGTTACGTGTAAATATATATTGTAGGAA----TTATATATGTCATTATAAGTATATATATCATGCTTGTCCGTGTGC
CAAAGAGGAAACTTCTGATTAGCTACACCACATATAGTTTTGTATGCTACGATGTGTACAGCCGGAGGCACGTACCCGCT
ATGCATGCATAGAGACATGCATGACGGTGGGAATATGTAGTGTATGCATGAGC--TAGCTGCGCAAATTATACACACTCC
TATCGTCAAGCATTATCATCTTCCTTCCTATCTTATGAGAGGATGTTTCTGAAGATTCACTCGTGCAGTAACCGGTGCTA
AACATACTGAAATTGTTAAATCTGTCAGGTGTAAGCAGTATCATAACAAATAAACAGTGTC--------AACTGCAAAAC
ATCTCCCACCCTCATCAGCTGTGAAAGTAAAAATAAAGGTGTTTGGAGCCCACGGGTTTCACTGAAATGAAACCTCTGTT
GGTAGGCGAAGGTCGATCG--GCAGGCGTCTTGTTTCCAGAAGAACTGAGTTAATTCCTTGTCTGCAGAAACTGACCAGA
ACGGCAAAACCGCAACCGTTCAGCTGCCGATCCCACGGCACGGGCGTAGGTAAAAGACGGGACTGCGCTACAGTCCTGCA
AATGTCCCTGCCGCGGATCGAGCGGCCCGCAGGCTCGCGCGCTCCGGGGGGCTGCTGGTCGGTCACGGGGCCGTTGCACC
AAAGGCACAACCGCACAAGGCGTCATCATGACTTTGATAAAGAGAGGGGCATGGCATGGCACTCGGACGCGCAAATTTCC
CATTCCATTTGCGGCTGAACAGGCCATAGATTCTACACTGCACAACAGCAACGTATCATGGTGTCACGAAAC
>SNPs
-------------------------------------------------------------------S------------
-----------------------------------S-----------S--------------------------------
-------------SS-SSSSSSSSSS------------S-----S------------S----------------------
S--------------S----------------------------------------------------------------
---------------------S----------------------------------------------------------
------------------------------SSSS------------------SSSSS------------S----------
-----------S-------S--SSSSS---------------S---------SS--SSSSSSSS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------S--SSSSSS---------
-------------------------------------------------------------------S------------
------------------------------------------------S-----------------SSSSSSSSSSSSSS
SSSSSSSSSSSSS---------S--S----------------------------SS------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S----------------------------S-----------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------SS----------
------------------S-------------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------------------------S----------------
----------------------------------------------------------------------S---------
--S-----------------------------------------------------------------------------
------------------------------------S-----------------S-------------------------
----------------------------S------------S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S---------------------------S----------------
-------S------------------------------------------------------------------------
-----------------------------S---------------------------------S----------------
-SSSS---------------------------------------------------------------------------
----------------------------------------------S----S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSS-----------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------S----------------------------------------------
-------------------------------------------------------------S------------------
-S----------------------------------------------------------------------
>forward_534
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ATTCACAGCCAGGCATCGAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTGCTCCAGC
TTGAATGCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGCTGCTCACGAGTAGGTTC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGCGGACTTCATGGACG
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_973
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CTACCAG
TGCAGCAGCTCAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2408
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AGGGTCCTCGTCCACGTC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_1459
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GC
TTGAATGCATGCATGGTGT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_3442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GTTCCATTTGCGGCTGAACA---------------------------------------------------
