>input_sequence_51284
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---------------------------------------------------ATGATGACGATTCTCATAGTCCTGTTCGT
CCTT--GGGTTCGTTGCAGGAGCGCAACAAACTGATGGTAATCCTCATTCAGGTAAATTTATGAGTCGCTATTTTGCATA
TTAGTTAATTATTTTTAGTCGGGCTGCAACTTTTTAATGGCTTTAATCCTGTTCGCGATTCGTCCTATTGATTGTCATTT
TTATTGGCGCATCACCCATGTACGTGACTATCGATAAGTGTGACATCCCTTGGAATAAAAGTCATACGGCTATATCTTGC
GTCCTAGAACATATGTTTTGGCTATAAGAGACCATGCGATTTTTATGATCCCACGGATTTTGACAGCTTCAAATTCCGAT
TTGTGTTGTGTCCTACTTTCTCCATCCACAATATTATATGTTTTTGCAAG------------------------CTATGT
TAGTTTATAAAAACGTCTTATATTATGAGATAGA-----------GGGAGTAGTATTTATGTTGTTCTGTGTATGC----
TAATA-------GAACACTACTGATTATTTTGTGGTTTGGTTCAGCCGCGTACGATGTCACGTGGTCACCGCGCGGCCCT
TCGTCGACAATCCCACCTCTTCATCGTAAGTAATCTCATTCTTTACCTCCACCT-AATAATTAACATAAGGTAGAATCAC
GTTATGTATATCTGCTTCCGATTTGTATTATGGAGCTAGCGATCATTTCCATGTTGAATGAATTGCGTACGTGTTGTGAG
TGCAGCGTCGGACGGCGTGTTCCCGACACAGTGGTGCAACCCCCGCCCACAGCACCTCAAGGCCGACAAAGGGATCCTCT
TTCTCAGGCGCAACCTGTTCGACGGCGCGGTGCTGCCCGCAGGCACCAAGCTCGGGCACGCCAGGAGGGCAGGCACCGCC
AGCACGGTCACCGGCACCAACCTCGCGCCGCCGCCGTTCGACTACGGCAGCCTCCGAAACATACTGACCTACTACAATAT
TGCGCCGGGCTCGGAGCAGGCCCGGCAGGTGGCCAGCACGCTCCGGTTCTGCGGCCGCAGCGAGGCACGAGGCGGCGACC
AGCCGGAAAAACCCCACCTCTGCGCCACCACCGAGCGAGCGGCCATGGAGTTCGCCGCGGCGGCCCTGGGAGCAGCGACG
GCGGAGCCGCTCAGGACGGTCGTGCACGGGCGCGAGGAGCCCCACAGGTACGTGGTGGCGCCCGGCGGCGTCGCCAGCAT
TGCCGGCGCGGTCGTGCCGTGCCACCCGCTGCCGTACCCGGCGGACGTGCTGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ACTGCCACCGGCCAAGCAACGTGGGCGCGGTGCGCGTGGA
GCTGGTCGGGCAGGACGACCCTACGCTGGGCGCGACGGCGATCGCCGTCTGCCACGAGGACACCTCCGGCTGGGACGCCG
AGTACTTCGCGACGCTCAACGGGTCCCGCGGCGAGCCGATCTGCCACTACATGCCAGAGAAGTATGTGGTGTGGGTGGGT
GGTGAAATCCACTAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr1A_1_TraesCS1A01G310000
CAAATATATCAAAGAGTTGCACTGAGTGATTGATGTGTGCTTACCGAGAGGTCGAAGTTTAACATTAAAGAGCATTGCGA
ATTACTCTTTATATCAAAAGGTCACAACTATATTGTAAAAAGAATAATTTACCCTACATATTGCTAGTCTTTCACAATTT
CCTAATTCTCGTAGCCCCTGCTCGCAATCGCACATCCGTTCAACAAAGATCACCAACGTCGATGTGGATCCATTGCTTCC
ACCACCTGTACCGTTGGTTCTCGTCTTCACCCCTCGCTAGGGAAAATGAGATAAAGTGAGGAGGATGAGTAATTAGGAAG
AAGGAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGATTCTTGTCCTTCCACGAGTGTCACGCCAGCTTTATTT
TATCTGATTTGTAGGTTCGGTACAAAAGTGAGTTCTCTAAAGATGTTGACAGGAATATATCAACACTTTGTGAGTACAAA
TATGAAAGGGAGTCCACCAGGAG-GACAAGGAGTATTTTTTATGTAGCATTATTTTCATCGTAACCGGCAATGGATTCCT
TCCATGTAGAGTGGATAGTGGCGTCGCAAGCATACCTATGGTGTG--------TACCGGATTTTGGTTGCGAAACCGAAA
TCACA--ACATTCGCGCTTTTTTCGGCTTTGTGTCGGTTTAGAAATGCAAACCTGATGCTAATGCTAGTATAAAAATACA
CTTGCCGAATAGAAAAAGCAAATTGGAGAGAGCATTGCGAAAGAAACTGCAATGATGACGATTCTCATAGTCCTGTTCGT
CCTT--GGGTTCGTTGCAGGAGCGCAACAAACTGATGGTAATCCTCATTCAGGTAAATTTATGAGTCGCTATTTTGCATA
TTAGTTAATTATTTTTAGTCGGGCTGCAACTTTTTAATGGCTTTAATCCTGTTCGCGATTCGTCCTATTGATTGTCATTT
TTATTGGCGCATCACCCATGTACGTGACTATCGATAAGTGTGACATCCCTTGGAATAAAAGTCATACGGCTATATCTTGC
GTCCTAGAACATATGTTTTGGCTATAAGAGACCATGCGATTTTTATGATCCCACGGATTTTGACAGCTTCAAATTCCGAT
TTGTGTTGTGTCCTACTTTCTCCATCCACAATATTATATGTTTTTGCAAG------------------------CTATGT
TAGTTTATAAAAACGTCTTATATTATGAGATAGA-----------GGGAGTAGTATTTATGTTGTTCTGTGTATGC----
TAATA-------GAACACTACTGATTATTTTGTGGTTTGGTTCAGCCGCGTACGATGTCACGTGGTCACCGCGCGGCCCT
TCGTCGACAATCCCACCTCTTCATCGTAAGTAATCTCATTCTTTACCTCCACCT-AATAATTAACATAAGGTAGAATCAC
GTTATGTATATCTGCTTCCGATTTGTATTATGGAGCTAGCGATCATTTCCATGTTGAATGAATTGCGTACGTGTTGTGAG
TGCAGCGTCGGACGGCGTGTTCCCGACACAGTGGTGCAACCCCCGCCCACAGCACCTCAAGGCCGACAAAGGGATCCTCT
TTCTCAGGCGCAACCTGTTCGACGGCGCGGTGCTGCCCGCAGGCACCAAGCTCGGGCACGCCAGGAGGGCAGGCACCGCC
AGCACGGTCACCGGCACCAACCTCGCGCCGCCGCCGTTCGACTACGGCAGCCTCCGAAACATACTGACCTACTACAATAT
TGCGCCGGGCTCGGAGCAGGCCCGGCAGGTGGCCAGCACGCTCCGGTTCTGCGGCCGCAGCGAGGCACGAGGCGGCGACC
AGCCGGAAAAACCCCACCTCTGCGCCACCACCGAGCGAGCGGCCATGGAGTTCGCCGCGGCGGCCCTGGGAGCAGCGACG
GCGGAGCCGCTCAGGACGGTCGTGCACGGGCGCGAGGAGCCCCACAGGTACGTGGTGGCGCCCGGCGGCGTCGCCAGCAT
TGCCGGCGCGGTCGTGCCGTGCCACCCGCTGCCGTACCCGGCGGACGTGCTGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ACTGCCACCGGCCAAGCAACGTGGGCGCGGTGCGCGTGGA
GCTGGTCGGGCAGGACGACCCTACGCTGGGCGCGACGGCGATCGCCGTCTGCCACGAGGACACCTCCGGCTGGGACGCCG
AGTACTTCGCGACGCTCAACGGGTCCCGCGGCGAGCCGATCTGCCACTACATGCCAGAGAAGTATGTGGTGTGGGTGGGT
GGTGAAATCCACTAGATTATGATCGGTGAAGTATGAATCTCGAGCTAAGAGGGATGACGTATCAATCTCCACCGTAATAT
GATCCGACCAAGCTTAAACTAATGGTCACTACATCT-----TTTATACTGTATAAGAACTGCATGCACGAATTTGGAGAA
ATATACGTGGAGTTCTGAACAACAGTCTAATTTCAAGCCGGAAACGTGAGATCCAATTGAACACCGGCGATATATATCGG
CACCATGACTTGGCTCTTCTTTGCATCCTCGACTTATAATTTCGATCCCATTGTGTATTCTGACACAAGTTTGGAGAATA
AGGATGAACTGTCCTCTAGCAACTTCGCTGGTGAGTCATGCTCTGCAATTTCACCTGTTTTAC-ACAGCATGACAACAGT
TAAAACAAACTAACAGAGGAGAACAGCACA---TATAGGATTCGTCAGTT--CAATCTGTAAGACTGT-AACGCAGTGGA
GGGGACTCACCGTTGTCCAGAAGAATCACCCTCTCGCTATCAAGAACCGATGTGATACGAGATGCGCTATCGTGATCACG
GTGCATTCGGCGAATTGCTGTTTCAAGGTTTTCTGGATCAAACCGTCGGTTATCGGATCCACTGAAGAAGTTGCCTCGTC
CAAAACTAGGATCCGCCTCCTCTTTAGAATCACCCTTCCCAAGCAAACAAGCTGCCGCTGACCCGCGCTCCAGTTTTCGC
CGTTCTCTGTCACTGCATTTCAGTTCAGAATGC-AAAGTTATTGGTTTGCC--ATCATAAAGAAGAGCAATATCCACTGG
GAATTTCTGTCATCTTGGAGTAC------------------TATCAAACCTGTAGAGTCGAGCTTAAGCTCGTTCTTCCT
AACTTCATCTCCAAGATGACAGCAGTCCAATGCCTAGACAACATAGATCACGCACAAACCACTTTAGCCATC--AAATAG
AAAATGCGGATGCT-GATTTTTTGCAAGTTATGGGGTCAAATCGA-TTTTTTAAATGAATGGAGTCAATTTGAAAATAC-
AGTACCTCCCAGA
>chr1B_69
--------------------------------------------------------------------AGAGCATTGTGA
ATTACTCTTGATATCACAGGGTGACAACTATATTGTAAAA-----AATTTACCATACATATTACTAGTATTTCCCAATTT
CCCAATTTTCAAAGCCCCTGCTTGCAATCCCACGTCAGTTCAACAAAGATCACCAACGTCGC--TGAATTCATTGCTTCT
------------GTTGGTTCTCATCCTCACCCCTTGCTAGGGAAAATGGGATTAAGTGAGGAGGATGAGTAATTAGGAAG
AAGGAAACTAAGGGAGGGGGAGGGGAAGCTAAGTACAAAACCAGAGGCCGCTCGTAGGCTCCCCTTTTACCACCATGGAC
TCCCGCATCTCATGAGCGTCAG----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TGTTCTTCCGCGAGTGCCACACCAGCTTTATTT
TATTTGATTTATAGGTTCGGTACAAAAGTGAGTTATCTAGAGATGTTGAGAGGAATATATCAACACTTTGTGAGTACAAA
GATACAAGTGGGTCCATCATAAAAGACAAGGGGTATTTGCTATCTAGCATTATTTTCATCGTAACTGCCAACGGATTCCA
TCCATGTAGAGTTGATGGTGGCGTGGCAAGCATACCAATAGTGTG--------TTC--------GGTTGCGAAACAGAAA
TCACA--ACATTCGCGCTTTTTCCGGCTTCGCGTCGGTTTAGAAATGCAAACCCGATGCTAATGCTAGTATAAAAATACA
CTTGCCGAATAGAAAATGGAAAACGAAGAGAACATTGCGAAAGAAACTGCGATGATGACGGTTCTCATAGCCATGTTCGT
CCTT--GGGTTCGTTGCAGGAGCAGAGCAAACCGATGGTCATCCTCATTCATGTAAATTTATGGGTCGCTATTTTGCACA
CTAGTTGATTGTTTTTAGTCGGGTTGCAATTTTTTGATGGTTTTAATCCTGTTTTTGATTCGTCCCGTTGATTGCCATTT
TTGTTGTCGCATCACCTACGTACATGCATGTCGATAAGGATGACGTCCCTTGAAATATAAGTCATACGGCTATACCTTGC
GTCCTAGCACATATGTCATGGCTATAAGAGACCATGCGGTGTTTATGGGCAAA------TTGATGGCTTCAAATTCCGGT
TTATGTTGTGTCCTATTTATATGAATGCTACTCTGCTTT-----------------------------------------
---TTTGACAAAAGCTCATATATTATGGGACGGA-----------GGGAGTACAACACTATTGATTATTTGAATTCAAAA
AGGAAGAAAAGGGAAAACTACTGATCATTTTGTGGTTT-GTTCAGCCGCGTATGATGTCACGTGGTCACCGCGCGGTCTT
TCGTCAACAATCCCACCTCTTCATCGTAAGCAATCTCATTTTTTACCTCCACCTTAACAATTAATTTAAGTTAGA-----
--------------------ATTTGTATCATGGAGCGATCATTAGTTTCCATCTTGA----ATTGCGTACGTGTTGTGAG
TGCAGCGTCGGACGGCGTGTTCCCGACACAGTGGTGCAACCCCCGGCCACAGCACCTCAAGGCCGACAAAGGGATCCTCT
TTCTCAAGCGCAACCTGTTCGCCGGCGCCGTGCTGCCCGCAGACACCAAGCTGGGCCACGTCAGGGGGACAGGCACCCCC
AGCACGGTCACCGGCACAGACCCCGTGCCGCCGCCGTTCGCCTACGGCAATCTCGGAGACATACTGGCTTACTACAGCAT
AACGCCGGGCTCGGAGCAGGCCCGGCAGGTCGCCAGCACGCTCCGGTTCTGCGGCCGCAGCGACGCACGAGGCGGCGACC
AGCCGGAAAAACCACACGTCTGTGCCACCACAGAGCAAGAGGCCATGGAGTTCGCCGCCGCGGCTCTGGGAGCGGCGTCG
GCGGAGCCGCTCAGGACGGTCGTGCACGGGCGCGAGGAGCCGCACAGGTACAAGGTGGCACACGGCGGCGTCGCCGGCAT
TGCCGGCGCGGTCGTGCCGTGCCACCCGCTGCCGTACCCGGCGGACGTGCTGTCAAGGTTTTGGTTACCGAATGAGGCAA
TTTTACCGAGGGAGACGGGTAAATGTGGTTACCACGGTTACCGAGAAATACCAAAAAATACCGAGAATATTTCAAGCGAA
TTTTATAGTTGAATTTTGAATTCAAATAAGTGGATGAACGAATATTCAAACCAGAGACCTCTCAAAACAGGAACTAGGTT
GCTACTAACATGCCAGAACCAACTCTCATGGCATTATTTAGATCCTACGTACTTTACTGTAAATCGAGTGTTTAAATTCA
AAAATTTCAGAAAAATGGTATTTTTTGTTCGGTATGGCGATTTACCGAGGGGCACGGAAATACGCGGTAACCATGGGAAA
TCTTGAAATTTCGACCGGTAACCAAAACCTTGCGTGCTGTACTGCCACCTGCCAGGCAACGTGCGGGCGGTGCGCGTGGA
GCTGGTCGGGCAGGACGACCCTTCGCTGGGCGCGACGGCGATCGCCGTCTGCCACGAGGACACCTCCGGCTGGGACGCCG
AGTACTTCGCGACGCTCAACGGGTCCCGCGGCGAGCCGATCTGCCACTACATGCCGGACAAGTATGTGGTGTGGGTAGCC
GGTGAAACCCACTAGCTTATAATCGGTGAAGTATGAATCTCGAGCTAAGAGGGATGAAGTATCAACCTCCACCTTAATAT
GATCCGACCAAGCTTAAACTAATGGTCACTACTAGTACATCTTTATACTG--TAAGAACTGCATGCACCAATTTGGAGAA
ATATATGTGGAGTTCTGAGCAGCCGTCTAATTTCAAGCCGGAAACGTGAGATCCAATCGAACACCGGCGATG----TCGG
CACCATGACTTGCTCTA-CTTTGCATCCTCTGCTTATAATTTTGATCCCATTGTGTATTCCGACACAAGTTTGGAGAATA
AGGACGAACTGTCCTCTAGCAACCTCGCCGGTGAGTCGTGCTCTGCAATTTCACCTGTTTTACGACAGCACAACAGGAGT
TAAAACAGACCAACAGAGGAGAACAGCATAAAATATAGGATTTGTCAGCTAAAAAT--------GTGC-AAGGCAGTGGA
GAGGACTAACCGTTGTCCAGAAGAATAACCCTCTCGCTATCAAGAACCGATGTGATACGG--TGCGCTATCGTGATCACG
GTGCATTCGGCGAATTGCTGTTTCAAGGTTTTCTGGATCAAACTGTCGGTTATTGGATCCACTGAAGAAGTTGCCTCGTC
CAAAACTAAGATCCGTCTCCTCTTTAGAATCACCCTTCCCAAGCAAACAAGCTGCCGCTGACCCGCGCTCCAGTTTTCGC
CATTCTCTGTCACTGCATTTCAGTTCAAAATGC-CAAGTTATTGGTTCGCC--ATCATAAAGAAAAGCAATGTCCACTGG
GAATTTCTTCATAAA-----TAC------------------TATCAAACCTGTAGAGTCGAGCTTAAGCTCGTTCTTCCG
AACTTCATCTCCAAGATGACAGCAGTCCAATGCCTAGACAACATAGATCC------------------------------
--AATGCAGATGCT-GATTTTTTGCAAGTTATGGGGTCAAATCAA-TTTTTCAAATGAATGGAGTAAATTTGAAACTATA
AGTACCTCCCAGA
>chr1D_746
CAAGGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------AGTATTTGTTACCTAGCATTATTTCCATCAT------CAACGGATTACA
CCCATGTAGAGTGGATCGTAGCGCAGCAAGCATACCGATAGTGTGCACTGGGGTTC--------GGTTGCAAAACAGACA
TCGCACAACATTTGCGCTTTTTCCGGCTTCGTGTCGGTTTAGAAATGCAAACCTGATGCTAATGCTAGTATAAAAATACA
CTTGCCGAATAGAAAATGGAAAACGGAGAGGACATTGCGAAAGAAACCGTGATGATGACGGTTCTCATAGCCATGTTCGT
CCTTGTGGGTTCGCTGCAGGAGCGCAACAAACTGATGGTTATCCTCATTCCGGTAAATTTATGGTAGA-TATTTTGCATA
CTAGTTGATTGTTTTTAGTCAGGCTGCAACTTTTTGATGGCTTTAATCCTACTTGTGATTCGTCCTATTGATTACCATTT
TTGTTGGCACATC----------GTGGCTGCCGATAAGGGTGACGTCCCTTGGAATAGAAGTTATACGGCTATATCTTGC
ATTCTAGTACATATGTTTTGGCTATAAGAGACCATGCGGTGTTTATGGCCCCGCAGATTGACA---CTTCAAATTCTGAT
GTATGTTGCGTTCTATTCCCTCCGCTTTGACGGTGTCCCCGCTTTGGTTTAGTAATATAAAAGTGTTTTTAACACTAGTA
TAGTGTCAAAAACACTCTTATATTATAAGATATATTATAAGACGGGGGAGTAGTATTTATGTTGTCCTGTTTATGCATGC
TAGTA-------GAACACCAGTGATTATTTTGTGGTTTGGTCCAGCCGCGTACGATGTCACGTGGTCACCGCGGGGTCCT
TCGTCAACAATCCCTCATCTTCATCGTAAGTAATCTCATTCTTTACCTCCGCCT-AATAATCAATGTAAGC---------
------------------------GTATTATGGAGCGATCATTAATTTCCATCTTGA----ATTGCGTACGTGTTGTGAG
TGCAGCGTCGGACGGCGTGTTCCCGACACAGTGGTGCAACCCCCGGCCACAGCACCTCAAGGCCGAGAAAGGGATCCTCT
TTCTCAAGCGCAACCTGTTCGACGG-GCGGTGCTGCCCGCAGGCACCAAGCTGGGCCACGTCTGGCGGACAGGCACCCCC
AGCACGGTCACCGGCGCAGACCCCGTGCCGCCGCCGTTCGCCTACAGCAACCTCGGAGACATACTGGCTTACTACAGCAT
AACGCCGGGCTCGGAGCAGGCCCGGCAGGTCGCCAGCACGCTCCGGTTCTGCGGCCGCAGCGAGGCACGAGGCGGCGACC
AACCGGAAAAACCCCACGTCTGCGCCAACACCGAGCAGGTGGCCATGGAGTTCGCCGCGGCGGCCCTGGGAGCGGCGACG
GCGGAGCCGCTCAGGACGGTCGTGCACGGGCGCGAGGAGCCGCACAGGTACACGGTGGCGCCCGGCGGCATCACCAGCAT
TACCGGCACGGTCGTGCCATGCCACCCGCTGCCGTACCCGGCGGACGTGCTGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ACTGCCACCGGCCAGGCAACGTGGGGGCGGTGCGCGTGGA
GCTGGTCGGGCAGGACGACCCTTCGCTGGGCGCGACGGCGATCGCCGTCTGCCACGAGGACACCTCCGGGTGGGACGCCG
AGTACTTCGCAACGCTCAACGGGTCCCGCGGCGAGCCTATCTGCCACTACATGCCGGACAAGTATGTGGTGTGGGTAACC
GGTGAAATCCACTAGCCTATGATCGGTGAAGTATGAATCTCGAGCTAAGAGGGGTGAAGTATCAATCTCCACCGTAATAT
GATCCAACCAAGCTTAAACTAATGGTCACTACTCCTACATATTTATACTG--TAAGAACTGCATGCACGAATCTGGAGAA
ATATATGTGGAGTTCTGAACAACCGTCTAATTTTAAGCCGGAAACGTGAGATCCAATCAAACACCGGCGATAT----CGG
CTCCATGACTCGGCTCTCCTCTGCATCCTCCGCTTATAATTTTGATCCCATCGTGTACTCCGACACAAGTTTGGAGAACA
AGGACGAACTGTCCTCTAGCAACTTCGCTGGCGAGTCGTTCTCTGCAATTTCACCTGTTTTAC-ACAACATCACAACAGT
TAAAACAGACCAACAGAGGAGAACAGCATA---TATAGGTTTTGTCAGTTAAAAAT--------CTGT-AACGCAGTGGA
GGGGACTAACCGTTGTCCAGAAGAATAACCCTCTCGCTATCGAGAACCGATGTGATACGA--TGTGCTATCGTGATCACG
GTGCATTCGGCGAATTGCTGTTTCAAGGTTTTCTGGATCAAACTGTCGGTTATCGGATCCACTGAAGAAGTTGCCTCGTC
CAGAACTAAGATCCGCCTCCTCTTTAGAATCACCCTTCCCAAGCAAACAAGCTGCCGCTGACCCGCGCTCCAGTTTTCAC
CATTCTCTGTGACTGCATTTCAGTTCAAAAGAT-CAAGTTATTGGCTCGCC--ATCATAATTGACTAAACAATCGCTGGC
ATCATAAAAGAAAAGCGTGTTTCTGGAGAGTTTATTATAGATATCGAACCTGTAGAGTCGAGCTTAAGCTCGTTCTTTCT
AACCTCATCTCCAAGATGACAACAGTCCAATGCCTAGAAAATGCAGATCGCACATAAATTACTTTAGCCATCAAAAATAG
AAAATACAGATGCTGATTTCCAGTTAAGTTATGCGGTCAAATTGACTTTTTTTAAGGAATGGAGTAAATTTGAAAATATA
AGTACCTCCCAGA
>chr2D_2583
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--------------------------------------------------------------------------GGAGTA
ATATATATGGAGTTCAGAACAACCGTCAAATTTTAAGCCGGAAACGTGGGATCAAA-----CACCGGCGATATAATTT--
---CATGATTTGGCTCTTC-TTGCATCCTGTGCTTATAATTTCGATCCCATCGTGTACTCCGACACAAGTTTTGAGAATA
AGGATGAACTGTCTTTTAGCAACTTCGCCGGTGAGTCGTACTCTACAATTTCACCTGTTTTAC-ACAACATGACAGTAGT
TAAAACAAGCAAACAAACAGAG-------AAG-AACAGGATTTGTCAGTT--AAAT--------CTGT-AACGAAGTGGA
CGAGACTCACCGTTGTCCAGAAGAATGACCCTCTCGCTATCAAGAACCGATGTAATACGG--TGTGCTATCGTGATGACG
GTGCATTCCGCAAACTGCTGTTTCAAGGTTTGCTGGATCAAACTGTCGGTTTTGGGATCCACGGAAGAAGTTGCCTCGTC
CAGAACTAAGATCCGTCTCCTCTTTAAAATCACCCTTCCCAAGCAAACAAGCTGCCGTTGACCCGCGCTCCAGTTTTCTC
CATTCTCCGTGACTGCATTTCAGTTCAGAATATTCAAGTTGTTGGTTCGGCATATCATAAAGAAAAGCAATATCTATTGG
GAATTTCTTATATATAC-----------------------ATATCAAACCTGTACAGTCGAGCTTGAGCTCGTTCTTCCT
AACTTCGTCTCCAAGATGACAGCAGTCCAATGCCTAGACAACGTAGATCACGCATAAATTACTTTGGCCATC--AAATAG
AAAATACAGATGCT-ATTTTCTTTTAAGTTATGGGGTCAAATTGGTTTTTT-AAATGAATGGAGTAAATTTGAAAATATA
ACTACCTCCCAGA
>chr2B_2583
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------GGAGTA
ATATATATGGAGTTCAGAACAAACGTCAAATTTTAAGCCGGAAACGTGGGATCCAA-----CACCGGCGATATAATTT--
---CATGATTTGGCTCTTC-TTGCATCCTGTGCTTATAATTTTGATCCCATCGTGTACTCCGACACAAGTTTTGAGAATA
AGGATGAACTGTCTTCTAGCAACTTTGCCGGTGAGTCGTACTCTGCAATTTCACCTGTTTTAC-ACAACATGACAATAGT
CAAAACAAGCAAACAAAGAGAG-------AAAAAACAGGATTTGTCAGTT--CAAT--------CTGTTAACACAGTGGA
CGAGACTCACCGTTGTCCAGAAGAATGACCCTCTCGCTATCAAGAACC-ATGTAATACGG--TGTGCTATCGTGATGACG
GTGCATTCCCCAAACTGCTGTTTCAAGGTTTGCTGGATCAAACTGTCGGTTTTGGGATCCACGGAAGAAGTTGCCTCGTC
CAGAACTAAGATCCGTCTCCTCTTTAAAATTACCCTTCCCAAGCAAACAAGCTGCCGTTGACCCGCGCTCCAGTTTTCTC
CATTCTCCGTGACTACATTTCAGTTCAGAAGATTCAAGTTATTGATTCGGCATATCATAAAGAAAAGCAATATCTACTGG
GAATTTCTTATATATAC-----------------------ATATGAAACCTGTAGAGTCGAGCTTAAGCTCGTTCTTCCT
AACTTCATCTCCAAGATGACAGCAGTCCAATGCCTAGACAACATAGATCACGCATAA-----------------------
--------------------------------------------------------------------------------
-------------
>SNPs
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--
---------S------S-S---S-----------------SSSSS--------S--------S-----S----S------
--S----S--SS----------S------S---S--S------------------------SSS--S--S---------S
SSSSSSSSSSSS----------S--S--------S-------------S---S---------------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----S------S---S------------
---S------S-----------------------S----S---------S------------------------------
S--SS---S-S-----S--SS-S---------------S----S---------------------S-S---S-------S
----------------S-------S-----------S--S--------------S-SSSSSSSS-----------S----
----------------------S------S--------------------------------------------------
----------------S-S---SS-------S------------------S---------S---------S-S-------
---------------------------------------S-----------------------S----------------
S-----S---S------------------------S-----------------S-S------------------S-----
--S-------------S-S-------S--S--------S-----S------------S----------------------
-------S------------------------------S-S------SS-----S--------SS---------------
--S------------S--S-----SSSSS-S-S-SS-S-SSS----SSSS---------------------------SSS
------SS-----SS-----------------------------------------------------------------
--S-------------------------------------------------------------------------S---
-----S----------------------------------------------------------SS----S----SSSSS
SSSSSSSSSSSSSSSSSSSS----------------S-S-SS-S--------S----SSSS-------------------
---------------------------------------------S----------------------------------
------S---------------------------------------------S--S----S----S--S--------S--
-----------------SS---S--S--------------S--------S----S--S--------S-S-------SS--
SS----------------------------S-------------------------------------------------
-----------------S------------------S--S---------------------------------S------
-----------------------------------------S---------SS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S----------S--------------
----------------------S---------------------------------------------------------
-------------------------------------------------------S--S-----------------S-SS
---------------S-----------------------------------------S----------------------
--------------------------------SS----------------SS----------------------------
-----S-----------------S---------------------------------S----------------SS----
------------------------------SS----------------------------S-------------------
-------------------------------------S------------------------------------------
----------S-----------------S-------------S-------------SSSSSSSS----------------
--------------------------S---------------------------------SS------------------
-------------------------------------------S------------------------------------
--------S-----------------------------------------------------------------------
-S--------------------------------S------------S----------------S---------------
--------SSS--S-S-SSS------------------------------------------------------------
------------------------------------------------------S---SS--------------------
-------S---------------------------------------------------------S------------S-
-------------
>forward_252
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TTGCTTCC
ACCACCTGTACC--------------------------------------------------------------------
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>reverse_1203
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--ATTGGCGCATCACCCATGTA----------------------------------------------------------
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>forward_275
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---------------GGTTCTCGTCTTCACCCCTC---------------------------------------------
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>reverse_1329
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------------------------------------------------TCCCACGGATTTTGACAGCT------------
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>forward_1227
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-------CGCATCACCCATGTACGTGA-----------------------------------------------------
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-------------
>reverse_3484
--------------------------------------------------------------------------------
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-------------------------------------------CGTCGGTTATCGGATCCACT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
