>input_sequence_51222
--------------------------------------------------------------------------------
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-----------------------------------ATGTCCACGAACACTTGGCGCCTAGTCACGGAGGATGACGGAGTC
GGCGATCTCCATGAGCGGCGCAAGGGTCTCGGGCGCGAACTTGCGCGCGAACATGTGGG---AGTAGGTCCCGTTGGACT
TCCTGAGCTCCCTGATGAGGTCCCCGGAGACCTCCTCCGGCTGGTAGGTGTGCGGGTGGCCGCCGACGGCGTCGGTCCAG
TTGACCCTGGTGAGCGTGTACTTGGTGCAGCCGTCGGGGTCCTGCATGTCGAGCAGCGTCGGGAAGTAGTGCTCCTCCGG
GTAGCACGAGTCCTTCTCCTTGACGAGGCACGGCGCCTTGAACTTGTTCCAGAGCCGCCTGTCCCTGACCACCATGACGG
CGTGCCTCCTGGCGAGCACGAAGAACTGGGAGCCGACGCGGAAGCGGTCGAAGGGCACCTCCGGGAGCATCACGTTGTCG
CCGCGCGCGTAGTAGCGGGCGTGCAGCGTGGGCTCGCTGTCCAGGATCTCGATGAAGCTGCGGTGGCGGCGGTGGCGGCC
GG---------CATTGTTGTCGGTGAGGAGGGTGCGGTAGAGGGCGGGGAACGGGAGGAGCGGGACGCAGGACTGGGAGA
GCAGCGCGAAGAATTGGTTGGCCGGGTCGTCGAGCAGCGCGGTGGCGAGGAGGCGGCGCGCGGCGGAGATGAGCGTGGCG
GAGGCGCGCGCCGTGGCCTTGCCCCGGATGATGCGGCCGCGGAAGGAGGGGGTCGGCGGCAGCGTGAGGTTGGCGGCGGG
GTCGGCGTGGACGTAGAGGTTGAGGAGGCCGTGGTGCCCCGCGAAGAACTTCTCCCAGAGCGGCGCGAAGACGAGGTCGG
AGTTGGTGAGGAAGAGGAAGGCCACCTTGGGCC---GCGCCTGCGGGCGGCGGCCGAAGACGCCGAAGGAGGAGGGCGCC
GCGCCGGAGCCGGAGCCGGAGCCGGCGGCGGGCGCGGCCGAGAGGAGCACGGCGCGGCGGAAGAGCGCGAGGTCCTCCGT
CTCGTCGGCGTCCGGGATGGCCGGGAGCGTCTTGGGCATCAGCAGGCGCGGCGCCAGGTAGTACACCGCCGGCATGGACA
GCAGCAGCAGGAACGACAGCACGTACGGCGACGCGTACGCCATGCCCGGC------AGCGGCGCTCCGGCGAAAACGCGC
GCTG----------GAGAAACC------GAAAAGGAAATCCCGGATCTTGGCGCCGGGGAAGAAGGCCAAGACGA---GG
ATCACAGGGAGATCCTGCTGCTCAGGACGGGCCGGACGGATCTCGCGGGCAAGGACGAGCACCCCCCGGGCATGGATCGA
GCAGGGAGGAAAGATTTCACCAGCCGAGAGCGCTCGCGCACCTGGAGGATCAAACGGCA----------------GGCGG
GCGGGA---AGGACAGAGGCGAGCTCCGGTTCCGTGGCGCCAAATCTGCTGCTGGTGGTGC---TCGGATCGGATCTCGC
GGTTCTGGCGGGACTGGG------CTGCTCTTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr5D_1_TraesCS5D01G037600
AGTGTAAGATTGCCCAGTAAGCTCTTTCAGGATTAATCAACTAGGAAGGAGTATATGCTAAGGCAGGTGCGGTTGCCACC
TAGAGCCAGAAAGAATATAAGCAACTTCGGTTCAAA-------------------------GCAAGAAGATAGTGGTGCC
ATGATACAGATGAT---ACATTTTTAGGGGAAAAGGTGTGTGATATTGACAATGACAACATGG---GGATAACATACACT
ACAAAAACCATCACTACATGTATCGACAGGTTGCCTCCATTGTGAATACATAGGATGATCATCCGTGCTAACTACCAGCG
ACACGCCTACCGCGTGCGTGCCAACGACTTCCTCTCGCTCGG-ATCAAAGTGGAAAGGAAAAACACCAAGAAACACAACA
A----TACTCACATAGGATAGAGGCAGTCGGGGCACTTCGCCACCAACA-CCACATCACTCTCTGATTCTAAGCAAGCAG
CAGCATCCCCTTCGC----CCACGGCGCCACCGACGGAACAACAAGGCGAAGTAGGTTTGCTGCTGGTTGCTTGCTCCTC
TCTGAAGAAACCACAAAGGGGATGGATGGATGGATCAGCTTATGCTTCTTCATCACATCACCAACCCTGCAAGGACAAAA
TAGAGAATTGCTGTGAGATTTCCATTCACCAACCGACACCCGAA-------CAATATCGTCAGCATCCTTTTACTAAGAC
ACCATTTTTATTAGTA------TTCACTGCA--ACAATACTCTCCTTTGATA----CTATCTGAACTGCAAGATAAGGAT
ACTTGCGTTGAATTAAAGACACTGTGATATAAAATGGCTACCAAATCAGATTAACTT------ATTGCTCATTCTCATTG
TAACTTGCAGTGCAATCTAATGAGACATGGCACAGTTGAAATTGCCTAAAACACTGATGAGACTTGGCACAGCTGAAATG
TCTACTAAAAAGTAAGTAAAACCTGATAG---GACT-----TTGCAGAACTGAAAATTCTAAGAAGAAAAGTCAT-GAAA
GGGATGATATATCTCTTCCTTACCTTGTTCTGTTCATGTCCACGAACACTTGGCGCCTAGTCACGGAGGATGACGGAGTC
GGCGATCTCCATGAGCGGCGCAAGGGTCTCGGGCGCGAACTTGCGCGCGAACATGTGGG---AGTAGGTCCCGTTGGACT
TCCTGAGCTCCCTGATGAGGTCCCCGGAGACCTCCTCCGGCTGGTAGGTGTGCGGGTGGCCGCCGACGGCGTCGGTCCAG
TTGACCCTGGTGAGCGTGTACTTGGTGCAGCCGTCGGGGTCCTGCATGTCGAGCAGCGTCGGGAAGTAGTGCTCCTCCGG
GTAGCACGAGTCCTTCTCCTTGACGAGGCACGGCGCCTTGAACTTGTTCCAGAGCCGCCTGTCCCTGACCACCATGACGG
CGTGCCTCCTGGCGAGCACGAAGAACTGGGAGCCGACGCGGAAGCGGTCGAAGGGCACCTCCGGGAGCATCACGTTGTCG
CCGCGCGCGTAGTAGCGGGCGTGCAGCGTGGGCTCGCTGTCCAGGATCTCGATGAAGCTGCGGTGGCGGCGGTGGCGGCC
GG---------CATTGTTGTCGGTGAGGAGGGTGCGGTAGAGGGCGGGGAACGGGAGGAGCGGGACGCAGGACTGGGAGA
GCAGCGCGAAGAATTGGTTGGCCGGGTCGTCGAGCAGCGCGGTGGCGAGGAGGCGGCGCGCGGCGGAGATGAGCGTGGCG
GAGGCGCGCGCCGTGGCCTTGCCCCGGATGATGCGGCCGCGGAAGGAGGGGGTCGGCGGCAGCGTGAGGTTGGCGGCGGG
GTCGGCGTGGACGTAGAGGTTGAGGAGGCCGTGGTGCCCCGCGAAGAACTTCTCCCAGAGCGGCGCGAAGACGAGGTCGG
AGTTGGTGAGGAAGAGGAAGGCCACCTTGGGCC---GCGCCTGCGGGCGGCGGCCGAAGACGCCGAAGGAGGAGGGCGCC
GCGCCGGAGCCGGAGCCGGAGCCGGCGGCGGGCGCGGCCGAGAGGAGCACGGCGCGGCGGAAGAGCGCGAGGTCCTCCGT
CTCGTCGGCGTCCGGGATGGCCGGGAGCGTCTTGGGCATCAGCAGGCGCGGCGCCAGGTAGTACACCGCCGGCATGGACA
GCAGCAGCAGGAACGACAGCACGTACGGCGACGCGTACGCCATGCCCGGC------AGCGGCGCTCCGGCGAAAACGCGC
GCTG----------GAGAAACC------GAAAAGGAAATCCCGGATCTTGGCGCCGGGGAAGAAGGCCAAGACGA---GG
ATCACAGGGAGATCCTGCTGCTCAGGACGGGCCGGACGGATCTCGCGGGCAAGGACGAGCACCCCCCGGGCATGGATCGA
GCAGGGAGGAAAGATTTCACCAGCCGAGAGCGCTCGCGCACCTGGAGGATCAAACGGCA----------------GGCGG
GCGGGA---AGGACAGAGGCGAGCTCCGGTTCCGTGGCGCCAAATCTGCTGCTGGTGGTGC---TCGGATCGGATCTCGC
GGTTCTGGCGGGACTGGG------CTGCTCTTGATGGTGGCGGTGTTTGGAGGGTGGAGATGTTGGTTTTTGGAGGGAGA
AGAGGGGGGAGGTTGGGGGGGAAGAGAGGAGTGAGGTGAG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTGAGGTGTTGTGCTCTGCTGCTTTTGTGGGACTCTGC
TCTGCTC----------TCATCTGCTCCACTCTGCAGCCTGTCCTAATCCCACCATCCATTAATTTGAATAATAAATGTA
GGTACAATTACCTTCGTTCATGACGTGCAATCGAACGTACTAGTACTAATCTCCTTCGATTATAATAACTCTGTCCAAAT
TGAACCCGCAACAATGTCTTATACACGTTTTTTGACACTATTCACATTGTGGGACGGAAGGAGTACTTTTTTTAATATTT
GAGATTTGAATTCATATACTACTCCCCATTTTTATACCCTAGTTGTCCAACATAACCTGTGGCGATTTATTACTTGCTGA
ATTGCAAGGAGCGGGTGCCAAAATGTAATTCATACTTTTTTGCAGCTCTTCCAATCGATGGATGGATAAATTAACGTATG
TCGCCAAACCCTTATTGAATAGGCTACGCCGCGTCGACACCATGATTTGGTTGTGGTTTCTAAACCAGATGACCTTTCTT
TTTGTGGTGATCCCTATATTTGACCTCTAAATTTATGGTTTGTCCTTTTCGGCGACCCTATTATTGGTTTGGAATGGCAG
AGATTAAATCTAACGCAAAAGGCATACATGCTATGGGTCGGTAAGTAAATGCAAATTCTGTAGAAACACAAAATTCAATT
TCCTCGCGTTGCTTTGTCGTTGGATTTGCACTGAGCTTGCACCCAGGGGCAAAATGCATGCAATTTGACCCCACTCCATG
ATTAGATCGGAAAATCTGAAGTTGACGCAAATTGTCAATGTTATGTCTACTCAAAGACCTGTTTAGAAGAAGAACAAAAT
TGTTTAGAAATTTCATGCTCAGCGTCATGTTAAAAGGTGCAGGCTATGGTTATTTTTAATAGCAGTGGCTCAAAAGAAAC
AGTTGT
>chr5A_2
-GTGTAAGATTGCCCAGTAAGCTCTTTCAGGATTAATCAACTAGGAGTGAGTACATGCTAAGGCAGGTGCGGTTGCCACC
TAAAAGCCGG------------------------AAAGAATATAAGCAACTTGGGTTCAAAGCAACAAGATAGTGGTGCC
ATGATACAGATGATGATACATTTTTAGAGGAAAAGGTGTGTGATATTGACAATGACAACATGG---GGATAACATATACT
ACAAAAACCATCACTACATGTATCGACAGGTTGCCTCCGTTGTGAATACATAGGATGATCATCCGTGCTAACTACCAGCG
ACACGCCTACCGCGTGC----CGACGACTTCCTCTCGCTCGGGATCAAAGTGGAAAGGAAAAACACCAAGAAACACAACA
A----TACTCACATAGGATAGAGGCAGTCGGGGCACTTCGCCACCAACACCCACATCACTCTCTGAGTCTGAGCAAGCAG
CAGCATCCCCTTCGCCGAGCGACG--GCCAGCGACGGAACAACAAGGCGAAGTAGGTTTGGTGCTGGT---TTGCTCCTC
CCTGAAGAAACCACAAAGGGGATGGATGGAC----CAGCTTATGCTTCTTCATCACATCACCAACCCTGCAAGGACAAAA
TAGAGAATTGTTGTGAGATTTCCGTTCACCAACTGACACCCGACACCCGAACAATATCATCAGCATCCTTTTACTAAGAC
ACCATTTTTATTAGTACTAGTATTCACTGCAACACAATGCTATCCTTTGATGCTATCTATCTGAACTGCAAGATAAGGAC
ACTTGCGTTGAATTAAAGACACTGTGATATAAAATGGCTACCAAATCAGATTAACTT------ATTGCTCATTCTCATTG
TAACTTGCAGTGCAATCTAATGAGACTTGGCACAGCTGAAA-TGCCTAAAGAACTGATGAGACTTGGCACAGCTGAAATG
CCTACTAAAAAGTAACTAAAACCTGATACTAAGACTTTGCATTGCAGAAATGAAAATTCTAAGAAGAAAAGTCAC-CAAA
GGGATGATATATCTCTTCCTTACCTTGTTCTGTTCATGTCCACGAACACTTGGCGCCTAGTCACGGAGGATGACGGAGTC
GGCGATCTCCATGAGCGGCGCAAGGGTCTCCGGCGCGAACTTGCGCGCGAACATGTGGG---AGTAGGTCCCGTTGGACT
TCCTGAGCTCCCTGATGAGGTCCCCGGAGACCTCCTCCGGCTGGTAGGTGTGCGGGTGGCCGCCGACGGCGTCGGTCCAG
TTGACCCTGGTGAGGGTGTACTTGGTGCAGCCGTCGGGGTCCTGCATGTCGAGCAGCGTCGGGAAGTAGTGCTCCTCCGG
GTAGCACGAGTCCTTCTCCTTGACGAGGCACGGCGCCTTGAACTTGTTCCAGAGCCTCCTGTCCCTGACCACCATGACGG
CGTGGCGCCTGGCGAGCACGAAGAACTGGGAGCCGACGCGGAAGCGGTCGAAGGGCACCTCCGGGAGCATCACGTTGTCG
CCGCGCGCGTAGTAGCGGGCGTGCAGCGTGGGCTCGCTGTCCAGGATCTCGATGAAGCTGCGGTGGCGGCGGTGGCGGCC
GG---------CATTGTTGTCGGTGAGGAGGGTGCGGTAGAGGGCGGGGAAGGGGAGGAGCGGGACGCAGGACTGGGAGA
GCAGCGCGAAGAACTGGTTGGCCGGGTCGTCGAGCAGCGCGGTGGCGAGGAGGCGGCGCGCGGCGGAGATGAGCGTGGCG
GAGGCGCGCGCCGTGGCCTTGCCCCGGATGATGCGGCCGCGGAAGGACGGGGTCGGGGGCAGCGTGAGGTTGGCGGCGGG
GTCGGCGTGGACGTAGAGGTTGAGCAGGCCGTGGTGCCCCGCGAAGAACTTCTCCCAGAGCGGCGCGAAGACGAGGTCGG
AGTTGGTGAGGAAGAGGAAGGCCACCTTGGGCC---GCGCCTGCGGGCGGCGGCCGAACACGCCGAAGGAGGAGGGCGCC
GCGCCGGAGCCGG------------CGGCGGGCGCGGACGAGAGGAGCACGGCGCGGCGGAAGAGCGCGAGGTCCTCCGT
CTCGTCGGCGTCCGGGATGGCCGGGAGCGTCTTGGGCAGCAGCAGGCGCGGCCCGAGGTAGTAGACCGCCGGCATGGACA
GCAGCAGCAGGAACGAGAGCACGTACGGCGACGCGTACGCCATGCCCGGCGGCGGCAGCGGCGCTCCGGCGAAA-CGCAC
GCTG----------GCGAAACCGAACCGGAAAAGGAAATCCCGGATCTTCGGGCCGGGGAAGAAGGCCAAGACGA---GG
ATCACGGAGAGATCCCGCTGCTCGGGGCGGACCGGACGGATCTCGGGGGCAAGAACGAGCACCTCCCGGGCATGGATCGA
GCGGGGAGGAAAGGTTTCACGA-----------------ACCGGGAGGATCAAACGGCA----------------GGCGG
GAAGGACAGGC--CAGCGGCGAGCTCCGGTTCCGTGGCGCCAACTCTGCTGCCCGGAGTCGGAGTCGGATCGGATCTCGC
GGTTCTGGCGGGACTGGGACTGGGCTGCAGTTGATGGTGGTGGTGTTTGGAGGGTGGAGATGTCGGTTTTTGGAGGGAGA
AGAAAGGGG--------GAGGGGGAGGGGGGAGGAGTGAG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTGAGGTGGTGTGCTCTGCTGCTTTTGTGGGACTCTGC
TCTGCTC--CTCTGCTCTCATCTGCTCCACTCCGCAGCCTGTCCTAATCCCACCATTTAATTAATTCC--AATCAATGTG
GGTACAATTACCTTCATTCATGACGTGCGACCGAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr5B_44
-------------------------------------------GGAGGGAGTATATGCTAAGGCAGGTGCGGTTGCCACC
TAAAAGCCGG------------------------AA-------------------------GCAAGAAGATAGTGGTGCC
ATGATACAGATGATGATACAT--TTAGAGGAAAAGGTGTGTGATATTGACAATGACAACATGGTGGGGATAACATACACT
ACAAAAACCATCGCTACATGTATCGACAGGTTGCCTCCGTTGTGAATACATAGGATGATAGTCCGTGCTAACTACCAGCG
GCGCGCCTACCGCGTGCGTGCCGACGACTTCCTCTTGCTCGG-AGCGAAGTGGAAAGGAAAAACACCAAGAAACACAACA
ACAAATACTCACATAGGATAGAGGCAGCCGGGGCACTTCGCCACCAACA-CCACATCACTCTCTGAGCCTGGGCAAGCAG
CAGCATCCCCTTCGC----CGACG--GCCAGCGACGGAACAACAAGGCGAAGTGGGTTTGGTGCTGGTTGCTTGCTCCTC
TCCGAAGAAACCACAAAGGGGATGGATGGAT----CAGCTTGTGCTTCTTCATCACATCACCAACCCTGCAAGGAAAAGT
G-GAGAATTGCTGTGAGATTTCCATTCACCAACCGACACCCGAG-------CAATATCATCAGCATCCTTTTACTAAGAC
AACATTTTTATTAGTA------TTCACTGCA--ACAATACTCTCCTTTGATG----CTATCTGAACTGCAAGATAAGGAC
ACTTGCGTTGAATTAAACACACTGTAATATAAAATGGCTACCAAATCAGATTAAATTATGGGAATTGTTCATTCTCATTG
TAACTTGCAGTGCAATCTATTGAGACATGGCACAGTTGAAA-TGTCTCAAAAACTGATGAGACTTGGCACAGCTGAAATG
TCTAAA-------AAGTAAAACATGATAG---GACTTTGCATTGCAGAAATGAAAATTCTAAGAAGAAAAGTCATTCAAA
GGGATGATATATCTCTTCCTTACCTTGTTCTGTTCATCTCCACGAACACTTCGCGCCTAGTCACGGAGGATGACGGAGTC
GGAGATCTCCATGAGCGGCGCAAGGGTCTCGGGCGCGAACTTGCGCGCGAACATGTGGG---AGTAGGTGCCGTTGGACT
TCCTGAGCTCCCTGATGAGGTCCCCGGAGACCTCCTCCGGCTGGTAGGTGTGCGGGTGGCCGCCGACGGCGTCGGTCCAG
TTGACCCTGGTGAGGGTGTACTTGGTGCAGCCGTCGGGGTCCTGCATGTCGAGCAGCGTCGGGAAGTAGTGCTCCTCCGG
GTAGCACGAGTCCTTCTCCTTGACGAGGCACGGCGCCTTGAACTTGTTCCAGAGCCGCCGGTCCCGGACCACCATGACGG
CGTGCCGCCTGGCGAGCACGAAGAACTGGGAGCCGACGCGGAAGCGGTCGAAGGGCACCTCCGGGAGCATCACGTTGTCG
CCGCGCGCGTAGTAGCGGGCGTGCAGCGTGGGCTCGCTGTCCAGGATCTCAATGAAGCTGCGGTGGCGGCGGTGGCGGCC
GGCGCCGGCGGCATTGTTGTCGGTGAGGAGGGTGCGGTAGAGGGCGGGGAACGGGAGGAGCGGGACGCAGGACTGGGAGA
GCAGCGCGAAGAAGCGGTTGGCCGGGTCGTCGAGGAGCGCGGTGGCGAGGAGGCGGCGCGCCGCGGAGATGAGCGTGGCG
GAGGCGCGCGCCGTGGCCTTGCCCCGGATGACGCGGCCGCGGAAGGACGGGGTCGGCGGCAGCGTGAGGTTGGCGGCGGG
GTCGGCGTGGACGTAGAGGTTGAGCAGGCCGTGGTGCCCCGCGAAGAACTTCTCCCAGAGCGGCGCGAAGACGAGGTCGG
AGTTGGTGAGGAAGAGGAAGGCCACCTTGGGCCGCGGCGCCTGCGGGCGGCGGCCGAACACGCCGAAGGAGGAGGCCGCC
GCGCCGGCGCCGG------------CGGAGGGCGCGGCCGAGAGGAGCACGGCGCGGCGGAAGAGCGCGAGGTCCTCCGT
CTCGTCCGCGTCCGGGATGGCCGGGAGCGTCCTGGGCAGCAGCAGGCGCGGGCCGAGGTAGTACACCGCCGGCATGGACA
GCAGCAGCAGGAACGAGAGCACGTACGGCGACGCGTACGCCATGCCCGGC------------GCTCCGGCGG-AACGCGC
GCTCGCTCGAGAAAGAGAAACC------GAAAAGGGAATCCCGGATCTTGGCTCCGGGGAGGAAGGCCGAGACGCGCCGG
ATCACAGAGGAATCCTGCT------------CCGGACGGATCTTGCGGGCAAGGACGAGCACCTCCCGGGCATGGATCGA
GCAGGGAG-AAAGATTTCACGAACAGAGAGCGCTCGCGCACCTGGAGGATGAAACCAGCCTCCGCGGGAGGAGACGGCGG
GCGGGGAGGAGGACAGAGGCGAGCTCCGTCGCCGTGGCGCCGAATCTGCTGCTGGCGGTG---GTCGGATCGGATCTCGC
GGTTCTGGCGGGACTGGG------CTGCAATCGATGG-GGTGGTGTTTGGAGGGGGGAGGTGCTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAGGTGGTGTGCTTTGCTGCTTTTGTGGGACTCTGT
TCTGCTCTGCTCTGCTCTCATCTGCTCCACCCTGCAACCTGTCCTAATCTCATCATCTATCAATTTGAATAATAAATGTA
GGTACAATTACCTTCATTCATGACGTACAAT-------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_1031
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GAAGATGACGGTGTC
GGCGATGGCCATGAGCGGGCCAAGGCAGTCGGGCGCGAACTTGCGCGCGAACATGTGCTCATAGGTGGAGCTGTTGGACT
GGCGCAGCTCGGCGATAAGCCGCGGCGACACCTCTGGCGCGGCATACGTGTGCGGGTGGCCCTCGAAGCTGTCGGTCCAG
TTGACGCGCGTGAGCGTGTACCGGGTGCAGCCGGCGGGGTCGGCCATGTCGAGAAGCGTCGGGAAATAGTGCTCCTCCGG
GTAGCACGAGTCCTGCGACTCCGGCAGGCACGGCTCCCTAAACTTTCGCCAGAGACGGCGCTCGCGGACGACTAGCACGG
CGTGGCGCCGGGCCAGCGTGAAGAACTGGGAGCCGATGCGGAACCGGTCGAAGGGCACCTCCGGGAGCATGGCGTCGTCA
CCGCGCGCCACGTAGCGCGCGGGCATCTGGGGCTCGCCGGCGAGCACCTCGATATAGCTCGGGAGGCGGTGGTGGTGCGC
GG---------CCTTGGGC---GGGAAGAGCGCCTCGTAGAGACGCGGGAAGGAGTGGAGCGGGACGCAGTGCTGCGAGA
GCAGCGCGAAGTAGGCGTTGGCCGGGTCGTCGAGTAGCGCGGCGACAAGCAGGCGCCGCGCCGCAGCGATGAGGCTCGGG
TCCCCGCGCCGCGTCGGCTTAGCCGCGACGAAGCGGCCCCGGAAGGAAGGCGTAGGGGGGAGCCGCAGCCGCACCGCCGG
GTCTGCGTGCACGTAGACGTTGAACCGGTCAGCGTGCCCCGCGAAGAAGCGCTCCCAAAGCGGCGCGAAGGTGAGGTCGG
AGTTGGTCAGGAACATGAACGCCACCTTGG--------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr2B_1031
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------GAAGATGACGGTGTC
GGCGATGGCCATGAGCGGGCCAAGGCAGTCGGGCGCGAACTTGCGCGCGAACATGTGCTCATAGGTGGAGCTGTTGGACT
GGCGTAGCTCGGCGATGAGCCGCGGCGACACCTCTGGCGCGGAATACGTGTGCGGGTGGCCCTCGAAGCTGTCGGTCCAG
TTGACGCGCGTGAGCGTGTACCGGGTGCAGCCGGCGGGGTCGGCCATGTCGAGAAGCGTCGGGAAATAGTGCTCCTCCGG
GTAGCACGAGCCCTGCGACTCCGGCAGGCACGGCTCCCTAAACTTTCGCCAGAGACGGCGCTCGCGGACGACTAGCACGG
CGTGGCGGCGGGCCAGCGTGAAGAACTGGGAGCCGATGCGGAACCGGTCGAAGGGCACCTCCGGGAGCATGGCGTCGTCA
CCGCGCGCCACGTAGCGCGCGGGCATCTGGGGCTCGCCGGTGAGCACCTCGATATAGCTCGGGAGGCGGTGGTGGTGCGC
GG---------CCTTGGGC---GGGAAGAGCGCCTCGTAGAGCCGCGGGAAGGAGTGGAGCGGGACGCAGTGCTGCGAGA
GCAGCGCGAAGTAGGCGTTGGCCGGGTCGTCGAGTAGCGCGGCGACAAGCAGCCGCCGCGCCGCAGCGATGAGGCTCGGG
TCCCCGCGCCGCGTCGGCTTGGCCGCGACGAAGCGGCCCCGGAAGGAAGGCGTAGGGGGGAGCCGCAGCCGCACCGCCGG
GTCTGCGTGCACGTAGACGTTGAACTGGTCAGCGTGCCCCGCGAAGAAGCGCTCCCAAAGCGGCGCGAAGGTGAGGTCGG
AGTTGGTCAGGAACATGAACGCCACCTTGG--------------------------------------------------
--------------------------------------------------------------------------------
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>chr2A_1031
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------GAAGATGACGGTGTC
GGCGATGGCCATGAGCGGGCCAAGGCAGTCGGGCGCGAACTTGCGCGCGAACATGTGCTCATAGGTGGAGCTGTTGGACT
GGCGCAGCTCGGCGACGAGCCGCGGCGACACCTCGGGCGCGGCATACGTGTGCGGGTGGCCCTCGAAGCTGTCGGTCCAG
TTGACGCGCGTGAGCGTGTACCGGGTGCAGCCGGCGGGGTCGGCCATGTCGAGAAGCGTCGGGAAATAGTGCTCCTCCGG
GTAGCAAGAGTCCTGCGACTCCTGCAGGCACGGCTCCCTAAACTTTCGCCAGAGACGGCGCTCGCGGACGACTAGCACGG
CGTGGCGGCGGGCCAGCGTGAAGAACTGGGAGCCGATGCGGAACCGGTCGAAGGGCACCTCCGGGAGCATGGCGTCGTCA
CCCCGCGCCACGTAGCGCGCGGGCATCTGGGGCTCGCCGGTAAGCACCTCGATATAGCTAGGGAGGCGGTGGTGGTGCGC
GG---------CCTTGGGC---GGGAAGAGCGCCGCGTAGAGCCGCGGGAAGGAGTGGAGCGGGACGCAGTGCTGCGAGA
GCAGTGCGAAGTAGGCGTTGGCCGGGTCGTCCAGTAGCGCGGCGACAAGCAGCCGCCGCGCCGCAGCGATGAGGCTCGGG
TCCCCGCGCCGCGTCGGCTTGGCCGCGACGAAGCGGCCCCGGAAGGAAGGCGTAGGGGGGTGCCGCAGCCTCACCGCCGG
GTCTGCGTGCACGTAGACGTTGAACTGGTGGGCGTGCCCCGCGAAGAAGCGCTCCCAAAGCGGCGCGAAGGTGAGGTCGG
AGTTGGTCAGGAACATGAAGGCCACCTTGG--------------------------------------------------
--------------------------------------------------------------------------------
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------
>SNPs
S---------------------------------------------S---------------------------------
--S-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------S-----------------------------------------
----------------------S---------------------------------------------------------
------------------------------------------------------------------S---S---------
--------------------S---SS----S-----------------------------S-------------------
-------------------------------SSSS---------------------------------------------
-------------------------------------------S--------------S---------------------
---------------------------------------------------S---------------------------S
--------------------------------------------------------------------------------
-----------------------------------------S---------S----------------------------
-------------------------------------------------S--------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------------------S--------------------------------
------------------------S-------------------------------------------------------
----------------------------------------------------------S---------------------
-------------SSSSSSSSSSSS-------------------------------------------------------
--------------------------------------S-------------S-S-------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------S---------------S--S---S--------------------------------S----------------
--------------------S-S-S-------------------------------------------------------
-------------------------------------------------------S----S-------------------
----------------------------SS----------S---------------------------------------
---SS----SSSSSSSS-S--SS---S--S-S-SS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------------------S----------------------
---------------S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_91
-----------------------------------------------------------------------GTTGCCACC
TAGAGCCAGAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_1447
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCCTGGCGAGCACGAAGAA-------------------------------------------------------
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--------------------------------------------------------------------------------
------
>forward_279
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GTATCGACAGGTTGCCTCCA-----------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_1979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GACGCCGAAGGAGGAGGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1865
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CGTGGACGTAGAGGTTGAGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AACGTATG
TCGCCAAACCCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
