>input_sequence_51213
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------------------------------ATGGCTCGTGAGATGAACGGCTTCTTCAGCCACCCTCCGACTCCGCCTCC
GG------CGCCGTACCCGCAGGAGGAGGCGGCCGCGGACGTGGACGACGCGGAGGACGGCGGCGGCGGGCAGGGGAAGC
TCTGCTCCAGGGGGCACTGGAGGCCCGCCGAGGACGCCCGGCTCAAGGAACTCGTCGGCCAGTACGGGCCCCAGAACTGG
AACCTCATCGCCGAGAAGCTCGACGGCAGATCAGGTATAA----------------AACAACCTAATACTATGTGGAGTT
CCTCCGATGCAATGCTGTTTCATTTCGGATTCGAAGATGCATGCATTGAATGCGCAAACGGAACTAGTCTACTGCTTTGG
TTTCTTTTACTGCGACCATCTTCCGTTTATTTGTTTTCGTGTGGATAACTTCTTGGACTTGTTTCTTTCTTTCTTTCTT-
-----------GTAGTAAAAT--ACATGCATTTTACTAGTAATTTGGAGTGTGTTGCGGTTAACGCAGTGGTGAATGGTG
ATCGTGGGTTCTGCGCC---CTGATTCCTGGTTTATTTTGTGATGATGTCGGCCAACAGGGAAAAGCTGCCGCCTGCGGT
GGTTCAACCAGCTGGACCCGCGGATCAACCGCCGGGCCTTCACGGAGGAGGAGGAGGACCGGCTGATGGCGGCGCACCGC
GCCTACGGCAACAAGTGGGCCCTCATCGCCCGCCTCTTCCCCGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGT
CCTCATGGCCCGCAGGCAGCGGGAGCAGTCCGGCGCCTTCCGCCGCCGCAGCAAGCCCGCCTCC---TCTTCCTCCTCCT
CCATCGCCCCGGCGCCGCACCACCCGGCCCCGGCCGTCGTCCTCCAGCACCAGCACCAGCACCAGCACCTGTACCAGCAC
CACGGGGCATCTCCCATTCCCATGCCGCTCCAGCCGTTCGCCATGGGGGTGGCCATAGCTACCGGGGTGTACAGCAAGGC
CGCTACGGCCACGGCCACGGCCAGCCGCGCCTACAGCGGCGGCGAGTCCGACGAGTCGGCGTCCACCTGCACCACCGACC
TCTCCCTCAGCTCCGGCAGCGCCGCCGTGCCCTGCTTCTACCACCACCAGGGTACGTGCCTCCCTCGCTGCATGCTTGCC
CTCAAGGCTCAAGTCCCAAGCGCCAAGCCCCAAGCTCTTGTTGTTTTGTTGCGTCGTCAGTCGTCAGTCCTCCACAT---
---------------GGACATGGCCAGCGTTTTGATCCGACTCCGACTGACATGGTGGTCTTTGGTGCAGGCTACGACAT
GGCTCCGCTAGCTCACGCCGTGACCCAGGCGTTCTCACCCAGCGCGCGCTCCGCCTTCTCCGCCCCGTCGTCCTCGTCGG
CGCGGCAACAGCAGCGCAGGCAGCAGCAGCAGCACGAGGAGGAGGATGGCGACAAGCTCAGCCTGCCCTTCTTCGACTTC
CTGGGCGTGGGCTCGACATGA-----------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G187800
CTGGTCTTACGTAAATGTGTAGATATTTTCTTTTGTGGGGGAAGGTGTAGATGAGTGAGTTACAAAAACTTGGTAGCTTG
CTTGCTTTGCTTAGGTGTTCCAAATATTTGACTCTGCAGCGCTGAAAATATATTCAAATCTCCATCTACTAGTAAT----
--TACTAGTAACCAAAATTGCAGCCTTGGGATA----GCAACTGCCAGCCATATCCCCAAACATAAACACAGGATGTGTA
AG-CCTGCTTGCGCTCAAAATTGGCGTATATTTGACATAAATAACGGGGGCAGAAGTAGTAAATGCATGAGATGGATATA
GATACACATCCCATAGTAATGTGGTGAAGAAAGAAATGTGGGTTGGGTATGCTACGGGGTGCGCGTAGGGAGAAGGGGCG
TTCCGGTGGGTTTGTCAAGGTGGCAAGGGACAGAGTTCCACCCCGGCCCCTGCCCCTGGTAGTGGTTGGGATTGGACTCC
CCAAACCCACACGAGTGGCCTCTGGAACCCAAAAAAGAATCATTCATAAAATCACCGATCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCCTTCTTTTCCAACCCTTTTGCCATGAGTCTCAAAGTAAGCGAAG
CCCCCCAAAGCCAACCAAACCGAGGTTAC-------------------------------------------ACAACCGA
AAAAGAAAAGAAAAGAAAA------ACCAATTAGTATT-AGCTTAGCCGAGAGATATAAAGTTAAAGTTAGGAGGCATTA
ATTGGTTTCTTGCTTGGCATTTAGTTGCGGGTGGCGAAGCAAGAACAAGAGAA-GAGAGGAGGCGGCCTCCTCCTCCCC-
-CTCCCGCCTCCTATATT---AGAGAGGGACTCCCCTCGCAGCGGCATCAACAGCAAACAAGAAGCTGTCCCTTTCGCTC
TCCTCTCTTCTTCCGTTACCACTCACCCTCCCGCTCCTCGCCTTTTAAGGCATCCTCCCCTCCAATCCTC--CTCCTTGA
ACCTTGAC-AGAGAGAGAGAGAGACCAAGAATGGCTCGTGAGATGAACGGCTTCTTCAGCCACCCTCCGACTCCGCCTCC
GG------CGCCGTACCCGCAGGAGGAGGCGGCCGCGGACGTGGACGACGCGGAGGACGGCGGCGGCGGGCAGGGGAAGC
TCTGCTCCAGGGGGCACTGGAGGCCCGCCGAGGACGCCCGGCTCAAGGAACTCGTCGGCCAGTACGGGCCCCAGAACTGG
AACCTCATCGCCGAGAAGCTCGACGGCAGATCAGGTATAA----------------AACAACCTAATACTATGTGGAGTT
CCTCCGATGCAATGCTGTTTCATTTCGGATTCGAAGATGCATGCATTGAATGCGCAAACGGAACTAGTCTACTGCTTTGG
TTTCTTTTACTGCGACCATCTTCCGTTTATTTGTTTTCGTGTGGATAACTTCTTGGACTTGTTTCTTTCTTTCTTTCTT-
-----------GTAGTAAAAT--ACATGCATTTTACTAGTAATTTGGAGTGTGTTGCGGTTAACGCAGTGGTGAATGGTG
ATCGTGGGTTCTGCGCC---CTGATTCCTGGTTTATTTTGTGATGATGTCGGCCAACAGGGAAAAGCTGCCGCCTGCGGT
GGTTCAACCAGCTGGACCCGCGGATCAACCGCCGGGCCTTCACGGAGGAGGAGGAGGACCGGCTGATGGCGGCGCACCGC
GCCTACGGCAACAAGTGGGCCCTCATCGCCCGCCTCTTCCCCGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGT
CCTCATGGCCCGCAGGCAGCGGGAGCAGTCCGGCGCCTTCCGCCGCCGCAGCAAGCCCGCCTCC---TCTTCCTCCTCCT
CCATCGCCCCGGCGCCGCACCACCCGGCCCCGGCCGTCGTCCTCCAGCACCAGCACCAGCACCAGCACCTGTACCAGCAC
CACGGGGCATCTCCCATTCCCATGCCGCTCCAGCCGTTCGCCATGGGGGTGGCCATAGCTACCGGGGTGTACAGCAAGGC
CGCTACGGCCACGGCCACGGCCAGCCGCGCCTACAGCGGCGGCGAGTCCGACGAGTCGGCGTCCACCTGCACCACCGACC
TCTCCCTCAGCTCCGGCAGCGCCGCCGTGCCCTGCTTCTACCACCACCAGGGTACGTGCCTCCCTCGCTGCATGCTTGCC
CTCAAGGCTCAAGTCCCAAGCGCCAAGCCCCAAGCTCTTGTTGTTTTGTTGCGTCGTCAGTCGTCAGTCCTCCACAT---
---------------GGACATGGCCAGCGTTTTGATCCGACTCCGACTGACATGGTGGTCTTTGGTGCAGGCTACGACAT
GGCTCCGCTAGCTCACGCCGTGACCCAGGCGTTCTCACCCAGCGCGCGCTCCGCCTTCTCCGCCCCGTCGTCCTCGTCGG
CGCGGCAACAGCAGCGCAGGCAGCAGCAGCAGCACGAGGAGGAGGATGGCGACAAGCTCAGCCTGCCCTTCTTCGACTTC
CTGGGCGTGGGCTCGACATGACCGGGCGGGGCGGG-----GCGGTGCGGTGTACAGGTGGAGGCCGATATCATCATCATC
ATCATCATCCTAAGGGAGGCGGCCAATCC----TTCCTAGCTAGTTAAGCAAGG-TTAGAGTCTAGAAGAAGCAGACTAG
GAGAAGATGAGGAGGATGAGGAGTTAAGTTGTTTTATTTATGGCGATGAATGTGACCTCTCTGGTTTCACT-CTCCTCAG
TTTTGCCGCTGATTACAGTACTTATTCAGATGGGATTAAAACAAGTCGC----------ATGTAATGTAATGGTGGCAAC
CCGAACTTAGTTTC----ATGTCCTCTT------------GTCTCTATTCCATTTGTTTGTGCCGATCGAAGAAGCAAGA
AAATAACTAGTAAAAATTGCCCCCTGCAGCGACGAGCATTAGATATGTCCGTTGTTGTCCATTCCATTCCATTGTCGGTG
CCCACCCAGCCGCCGGCGACGGCGAGAGAGAAACAAATTAAAGGTTCACTCAGTTTACTAAGCCGGTGCACTAGGAGTAA
GA---CTATGACTAGGAGCGGACCGGCCGGGCCGGCGTGATCGGTGCGTACGACGAG-----TATGTGAACGCAGCGGCG
AGC--------CTTTCTTTCTTTCTTTCTTTCTTGTTGCATTCATCAACAAGAACGACGAGTCATTTTCCTCTCTCGCTC
TCTCTC-TCACGGGGC-------------GGGACGGGGCGGGGCGGGGCGGGTCGGGGCCAGGCGGGCGGGCGGGCATGG
TCTCGGCCTCTCGGGGGATTCCCTTGGACTGTTGCGCGTGAGCA-------------------------TGGCGGGGACG
GATGGATGGTGCCTCGGCGGAGGAGGAGGACCTCGCCTCATGCATCCTCAC-----CACGCACGCCTTTGCAAGCCAACG
AAACTGCTGTTGCAACAGCATCTCGTTGCTTCTTCTCTTCTG---ACTCCGTTACCAGTTGCTTCGTCA--------CTC
GCTCGCTCGCTTTTCTGTAATTGCTGCTACCTGCACACTGCCTGCCT----GCTCGCCTCATCACCGGCGACAATCCTGT
CTTAATTATGGCC
>chr3D_1
CTGGTCTTACATAAATGTGTAGATTTTTTTTG-TGTGGGGGAAGGTGTAGATGACTGAGTTACAAAAACTTGGTAGCTTG
CTTGCTTTGCTTAGGTGTTTCAAATATTTGACTCGGCAGCACTGAAAAGATATTGAAATATTCATCTACTAATAACTACT
AATAGTAGTAAGCAAAAGTGCAGCCTTGGGATATATAGCAATTGTCAGCCATATCCGCAAACATAAACACAGGATGTGTA
AC-CCTGCTTGCGCTCAATATTGGCGTATATTTGACATAAATAAGGGGAGCAGAAGTAGTAAATGCATGAGATGGATATA
GATACGACG--CATAGTAATGTGATGAAGAAATG---------TGGGTATGCTACGGGGTGCGCATAGGGGGAAGGGGCG
TTCCGGTGGGTTTGTCAAGGTGGCAAGGGACAAAGTTCCACCCC------GGCCCCTGGTAGTGGTTGGGATTGGACTCC
CCAAACCCACACGAGTGGCCTCTGGAACCCAAAAAAAGAATCATAAAACCA-----------------------------
----------TCTCTCTCTCCCTCTCTCTCTCTGCCCTTCTTTTCCAACCCTTTTGCCATGAGTCTCAAAGTAAGGGAAG
CCCCC-AAACCCAACCAAACCGAGTATCCGACCCAAGCACCCAACAATACAACTGCTGTACAAAACAAGGTTACCACCGT
AAAAGAAAAGAAAAGAAAAGGAAAAACCAATTAGTGGTAAGCTTAGCCGAGAGATATAAAGTTAAAGTTAGGAGGCATTA
ATTGGTTTCTTGTTTGGCATTTTGTTGCGGGTGGTGAAGCAAGAACAAGAGAA-GAGAGGAGGCGGCCTCCTCCTCCCCG
CCTCCA-CCTCCTATATT---AGAGAGGGACTCCCCTCGCAGCGGCATCAACAGCAAACAAGAAGCTGTCCCTTTCGCTC
TCCTCTCTTCTTCCGTTACCACTCACCCTCCCGCTCCTCGCCCTTTAAGGCATACCCCTCTCCAATCCTC--CTTGAACC
TT---------AGAGAGAGAGAGACCAAGAATGGCTCGTGAGATGAATGGCTACTTCAGCCACCCTCCGCCTCCGCCTCC
GGTTCCGGCGCCGTAC---CAGGAGGAGGCGGCCGCGGACGTGGACGACGCGGAGGACGGCAGCGGCGGGCAGGGGAAGC
TCTGCTCCAGGGGCCACTGGAGGCCCGCCGAGGACGCCAGGCTCAAGGAACTCGTCGGCCAGTACGGCCCCCAGAACTGG
AACCTCATCGCCGAGAAGCTCGACGGCAGATCAGGTAATAAGAA---AAATAAAACAACCTCTAA----TATGTGGAGTT
CCTCCGATGCAATGCTGTTTCATTTCGGATTCGAAGATGCAT----TGAATGCGCAAACGGAACTACTCCTA-CTACTGG
TTTCTTTTACTGCAACCATCTTCCGTTT---------CGTGTGGATAACTTCT--------TTTCTTTCTTTCTTTCTT-
-----------GTAAAAGTAAAAACATGCATTTTAGTATTAATTTGGAGTGTGTTGCGGTTAACGC-------AATGGTG
ATCGTGGGTTGTGCCTGATTCG--TTCGTGGTTTATTTTGTGGTGATGTCGGCCAACAGGGAAAAGCTGCCGTCTGCGGT
GGTTCAACCAGCTGGACCCGCGGATCAACCGCCGGGCGTTCACGGAGGAGGAGGAGGACCGGCTGATGGCGGCGCACCGC
GCCTACGGCAACAAGTGGGCCCTCATCGCCCGCCTCTTCCCCGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGT
CCTCATGGCCCGCAGGCAGCGGGAGCAGTCCGGCGCCTTCCGCCGCCGCACCAAGCCCGCCTCC---TCCTCCTCCTCCT
CCATCGCCCCGGCGCCGCACTACCCA------GGCGTCTTCCTCCAGCACCAGCACCAGCACCAGCACCACTACCAGCAC
CACGGGGCTTCTCCCATTCCCATGCCGCTCCAGCCGTTCGCCATGGGGGTGGCCATAGCAACCGGGGTGTACAGCAAGGC
C------GCCACGGCCACGGCCAGCCGCGCCTACAGCGGCGGCGAGTCCGACGAGTCGGCGTCCACCTGCACCACCGACC
TCTCCCTCAGCTCCGGCAGCGCCGCCGTCCCCTGCTTCTACCACCACCAGGGTACGTGCCTCCCTCGCTGCATGCTTGCC
CTCAAGGCTCAAGTCCCAAGCC-----CCCCAAGCTGTTGTTGTTTTGTTGCGTCGTCAGTCGTCAGTCCTCCACATGGA
CATGGAGATGGACATGGACATGGCCAGCGTTTTGATCCGAGTCCGACTGACATGATGGTCTTTGGTGCAGGCTACGACAT
GGCTCCGCAAGCTCACGCCGTGACCCAGGCGTTCTCGCCGAGCGCGCGCTCCGCCTTCTCCGCCCCGTCGTCCTCGTCGG
CGCGGCAACAGCAGCGCAG---GCAGCAGCAGCACGAGGAGCAGGATGGCGACAAGCTCAGCCTGCCCTTCTTCGACTTC
CTGGGCGTGGGCTCGACATGACCGGGCGGG----------GCGGTGCGGTGTACAGGTGGAGGCCGATATCATCATCATC
GTCGTCGTCCTAAGGGAGGCGGCCAATCC----TTCCTAGCTAGTTAAGCAAGG-TTAGAGTCTAGAAGAACCAGACTAG
GAGAAGATGAGGAGGATGAGGAGTTAAGTAGTTTTATTTATGGCGATGAATGTGACCTCTCTGGTTTCACTCCTCCTCAG
TTTTGCTGCTGATTACAGTACTTATTCAGATGG----AAAAGAAGTCGCATGTCATGTAATGTAATGTAATGGTGGCAAC
CCGAACTTAGTTTCTTTCATGTCCTCTT------------GTCTCTATTCCATTTGTTTGTGCCGA----AGAAGCAAGA
AAATAACCAAAAATTGC--CCCCCTGCAGCAACGAGCATTTGATATGTCCGTTGTTGTCCGTTCCATTCCATTGTCGGTG
CCCACCCAGCCGCTGGCGACGGCGAGAGAAAAACAAATTAATGGCTCACTCAGTTTACTAAGCCGGTGCACTAGGAGTAA
GAAGACTAGGACTAGGAGCGGACCGGCCTGGCCGGCGTGATCGGTGCGTACGACGAG-----TATGTGAACGCAGCGGCG
AGCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTGTTGCATTCATCAACAAGAACGACGAGTCATTTTCCCCTCTCTCTC
TCTCTC-TCTCTCTCTCTCTCTCTCA--AGGGTCGGGTCGGGGCGGGGCGGGTCGGGGCCGGGCGGACGGGCGTGG----
--------TCTCGGGGGATTCCGTTGGACTGTTGCGCGTGAGCATGGCC--TGGTGGTGGTGGTGGCCGTGGCGGGGACG
GATGGATGGTGCCTGGGCGGAGGAGGAGGACCTCGCCTCATGCATCCTCACGCACGCACGCACGCCTTTGCAAGCCAACG
AAACTGCTGTTGCAACAGCATCTCGTTGCTTCTTCTCTTCTG---ACTCCGTTACCAGTTGCTCATCTCGTCACTCGCTC
GCTCGC-----TTTCTGTAATTGCTGCTACCTGCAA-----CTGCCT----GCTCGCCTCATCACCGGCGACAATCATGT
CTTAATTATGGCC
>chr3B_157
TACGTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTAATCAAAAGTGCAGGGTTGGGATC----GCGATTGTTAGCCATATCCCCAAACATAAACACGGGATATGGA
AAACCTGCTTGCGCTCAGTATTCGCGTATATTTGACATAAATAACGGGAGCAGAAGTAGTAAATGCATGAGATGGATATA
GATAC-----------------GATGCAGAAATG---------TGGGTATGCTACGGGGTGCGCGTAGAGAGTAAGGGCG
TTCCGGTGGGTTTGTCAAGGTGGCAAGGGACAGAGTTCCACC----CCCCGGCCCCTGGTAGTGGTTGGGATTGGACTCC
CCAAACCCACACGAGTGGCCTCTGGAACCCAAAAAAAGAATCATAAAACCA-----------------------------
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCCTTCTTTTCCAACCCTTTTGCCATGAGTCTCAAAGTAAGGGAAA
CCCCC-AAACCCAACCAAACCGAGTATCCGACCCAAGCACCGAACAATACTACTGCAC----------------------
----------------AAA------ACCAATTAG------------CCGAGAGATATAAAGTTAAAGTTAGGAGGCATTA
ATTGGTTTCTTGTTTGGCATTTTGTTGCGGGTGGCGAAGCAAGAACAAGAGAAAGAGAGGAGGCGGCCTCCTCTTCCAC-
-CTCCA-CCTCCTATATTAGAAGAGAGGGACTCCCCTCGCAGCGGCATCAACAGCAAACAAGAAGCTGTCCCTTTCGCTC
TCCTCTCTTCTTCCGTTACCACTCACCCTCCCGCTCCTCGCCTTTTAAGGCAAATAGCCCTCCTCCCTAAGACTCCTTCA
ACCTTAGAAAGAGAGAGAGAGAGACCAAGAATGGCTCGTGAGATGAATGGCTTCTTCAGCCACCCTCCGCCTCCGCCTCC
GG------CGCCGTAC---CAGGAGGAGGCGGCGGCGGACGTGGACGACGCGGAGGACGGCGGCGGCGGGCAGGGGAAGC
TCTGCTCCAGGGGCCACTGGAGGCCCGCCGAGGACGCCCGGCTCAAGGAACTCGTCGGCCAGTACGGCCCCCAGAACTGG
AACCTCATCGCCGAGAAGCTCGACGGCAGATCAGGTAATAAGAAGAGAAATAAAACAACAACCTAATACCATGTGGA---
-----GATGCAATGCTGTTTCATTTCGGATTCGAAGATGCAT----TGAATGCGCAAACGGAACTACTCTACTCTACTGG
TTTCTTTTACTGCAACCATCTTCCGTTT---------CGTGTGCATAACTTCT--------TTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTGTAAAAATAAATACAATG----------------------------GGTTAACGC-------AATGGTG
ATCGTGGCTTGTGCCTGATTCTGATTCCTGGTTTATTTTGTGATGATGTCGGCCAACAGGGAAAAGCTGCCGTCTGCGGT
GGTTCAACCAGCTGGACCCGCGGATCAACCGCCGGGCCTTCACGGAGGAGGAGGAGGACCGCCTCATGGCGGCGCACCGC
GCCTACGGCAACAAGTGGGCCCTCATCGCCCGCCTCTTCCCCGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGT
CCTCATGGCCCGCAGGCAGCGGGAGCAGTCCGGCGCCTTCCGCCGCCGCACCAAGCCCGCCTCCGCCTCTTCCTCCTCCT
CCATCGCCCCGGCGCCGCACTACG------CGGGCGTCGTCCTCCAGCACCAGCACCAG------------TACCAGCAC
CACGGGGCATCTCCCATTCCCATGCCGCTCCAGCCGTTCGCCATGGGGGTGGCGATAGCGACCGGGATGTACAGCAAGGC
C------GCCACGGCCACGGCCAGCCGCGCCTACAGCGGCGGCGAGTCCGACGAGTCGGCGTCCACCTGCACCACCGACC
TCTCCCTCAGCTCCGGCAACGCCGCCGTGCCCTGCTTCTACCACCACCAGGGTACGTGCCTCCCTCGCTGCATGCTTGCC
CTCAAGGCGCAAGTCCCAAGCGCCAAGCCCCAAGCTGTTGTTGTTTTGTTGCGTCGTCAGTCGTCAGTCCTCCACATGGA
CATGGA------CATGGACATGGCCAGCATTTTGATCCGAGTCCGACTGACATGGTGGTCTTTGGTGCAGGCTACGACAT
GGCTCCGCAAGCTCACGCCGTGACCCAGGCCTTCTCGCCGAGCGCGCGCTCCGCCTTCTCCGCCCCGTCGTCCTCCTCGG
CGCGGAGACAGCAGC------------AGCAGCACGAGGAGGAGGATGGCGACAAGCTCAGCCTGCCCTTCTTCGACTTC
CTGGGCGTGGGCTCGACATGACCGGGCGGGGCGGGGCGGTGCGGTGCGGTGTACAGGTGGAGGCCGAGATCATCATCATC
---------CTACGGGAGGCGGCTAATCCGGAATTCCTAGCTAGTTAAGCAAGCCTTATAGTCTAGAAGAAGCAGACTAG
GAGAAGAT---------GAGGAGTTAAGTTGTTTTATTTATGGCGATGAATGTGACCTCTCTGGTTTCACCCCTCCTCAG
TTTTGCTGCTGATTACACTACTTATTCAGATGG----AAAACAAGTCGCATGTAATGCAATGTAATGTAATGGTGGCAAC
CCGAACTTAGTTTC----ATGTTGTCTTCCTCTCTGGAAAGTCGCTATTCCATTTGTTTGTGCCGATCGAAGAAGCAAGG
AAATAACTAGTAAAAATTGCCCCCTGCAGCAACGAGCATTTGATATGTCCGTTGTTGTCCATCCCATTCCATTGTCGGTG
CCCACCCAGCCGCCGGCGACGGCGAGAGAAAAACAAATTAATGGCTCACTCAGTTTACTAAGCCGGTGCACTAGGAGTAA
GA---CTAGGACTAGGAA---------CGGACCGGCGTGATCGGTGCGTACGACGAGCGGCATATGTGAACG--------
-----------------TTCTTTCTTTCTTTCTTGTTGCATTCATCAACAAGAACGACGAGTCATTTTCCCCTCTCTCTC
CCTCTCCTCTCTCTCTCTCTCTCTATAGAGGGTCGGGGCGGGTCGGGGCGGGTCGGGGCCGGG----CGGGCGTGG----
--------TCTCGGGGGATTCCGTTGGACTGTTGCGCGCATGGCCTGGTGGTGGTGGTGGTGGTGACCGTGGCGGGGACG
GATGGATGG--------------------ACCGCGCCTCATCCATCCTCAC-----CACGCACGCCTTTGCAAGCCAACG
AAACTGCTGTTGCAACAGCATCTCGTTGCTTCTTCTCTTCTTACTACTCCGTTACCACTTGCTACGTCA--------CTC
GCTCGC-----TTTCTGTAATTGCTGCTACCTGCAA-----CTGCCTGCCTGCTCGCCTCATCACCGGCGACAATCCTAT
CTTAATTATGGCC
>SNPs
----------S-------------S----S-SS---------------------S-------------------------
-------------------S--------------S-----S-------S-----S----S-S---------S---S----
----S------S-----S-----------------------S--S-----------------------------------
-S----------------S-----------------------------S-------------------------------
-----SSSSSS------------S--------SSSSSSSSSSS-------------------------------------
--------------------------------------------SS----S-----------------------------
------------------------------------SS-SSSS-S-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
---------------------------------------------------------------------------S----
-----S---S--------------SS-S----------------------------------------------S----S
-----------------------------------SS-------------------------------------------
------------S---------S---------------------------------------------------------
-----SS-------------------------------------------------------------------------
-----------------------------------------------------S-S----------------------S-
-----SSS---------------------------------------S---------------------S----------
----------------SSS-------------------------------------------------------------
-------------S-----------------------------------------------------S------------
-------------------------------------SS-----------------------------------------
------------------------------------------SSSS--------------------S------SSSS---
-------------S--------------SSSSSSSSS----------------SSSSSSSS-------------------
--------------SS--S-S--------------S--S---------------------------SSSSSSS-------
----------S---SSS-------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------S----SSSSS---S-----------------------------------SS---------
-----------------------------------------------------------S--------------------
-SSSSSS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------------------------S---------------------------------------
--------S---------------------------S--S----------------------------------------
-------------------SSS----------------------------------------------------------
--------------------------------------------------------------------------------
S--S--S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------SSSS-------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------S---------------------------------------
-----------------------------S-----------S--S-----------------------------------
--------S-----------------------------------------------------------------------
----------------------------------------------------------------------S-----S---
---------S-SSSSS----------------S---------------------------S-----S------S-SSSSS
SSSSSSSS--------------S---------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------------------------------------S----------------
------SSSSS------------------------SSSSSS---------------------------------------
-------------
>forward_665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CAAAGCCAACCAAACCGAGG-------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GGTGAATGGTG
ATCGTGGGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_666
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AAAGCCAACCAAACCGAGGT------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2361
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------CTCCGACTGACATGGTGGTC--------------------
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>forward_1039
--------------------------------------------------------------------------------
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-----------------------------------------------------------CCCTCCAATCCTCCTCCTTG-
--------------------------------------------------------------------------------
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>reverse_3129
--------------------------------------------------------------------------------
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--------TGACTAGGAGCGGACCGG------------------------------------------------------
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