>input_sequence_51178
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGAAGAAGACCGTGGTCCTGTACCCTGGCCTCGGCGTCGGCCACCTGGTGCCGATGGTCGAGGTTGC
CAAGCTGTTCCTCAAGCACGGCCTGGCCGTCACCTTGGCGCTCGTCGAGCCGCAGGTCAAGTCCACGGACTTCTCCGCCG
CGGTCGCCCGCGCGAGGGCCTCCAACCCCTCCGTCGACTTCCACGTCCTGCCGTCGCCGCCCGCCGATTCCAACCCCGAC
AGCGGGCCCAGGCACCACGTCGTCAAGGTTATCCTCCCGCCGCCCGCCGTCCTGCCGTCGCCGCCCGCCGCCATGAACGC
GCCCCTCCGCGACTTCCTCCGCTCGCTGCCCGCCGTCCACGCGCTCGTCCTCGACATGTTCTGCGTCGACGCCCAGGACG
TCGCAGCCGAGCTCAAGCTGCCGGTCTACTACTCGTTCGCCTCCGCTGCCGGCGACCTCGCCATCTTCCTCAACCTGCCG
AGCAAGTTCGCCAGCAATACGGCCAAGGTAAAAGAGCTCGGCGACTCCATCATCACCTTCCCGGGTGTTCCTCCTTTCAA
GGCTTCGGAGCTGCCGTCCGAAGTTATCGCCGACGATGAAGCACTCGTGTACGTCTTACGCATGTTTCAGCGAATGGCGG
AGGCGAAAGGAATTCTTATAAATTCCTTCGACTCGCTGGAAAAGCCCGCACTGAGCGCTCTCAGCGAAGGACTTTGCGTC
CCTGGTCGTGCGACGCCGCCGGTCTACTGCATCGGGCCGTTGGTCTCTGGAGGCGGAGACAAGGAGCACGAGTGCCTCCG
CTGGCTGGACGCGCAGCCGGACCAGAGCGTAGTGTTCCTCTCCTTCGGCAGCCTGGGCACATTCACCAGTAAGCAGCTAG
AGGAAATTGCAATTGGTTTGGAGAAGTCAGGGGAGAGGTTCCTGTGGGTTGTGCGGAGCCCGCGCAGTCCCGACCAGAAG
CACGGGGATCCGCTGCCGGAGCCTGACCTCGAGGCGCTCATGCCGGAAGGGTTCTTGGAGAAGACCAAGGACAGAGGGCT
CGTGGTGAAGTCTTGGGCGCCGCAGGTGGAGGTCCTGCGTCACAGGGCAACCGGCGCATTCATGACGCACTGCGGCTGGA
ACTCGACACTGGAGGGCATCACGGCAGGGTTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTTGGGGTGGAGATGAGAGGCTACAATGAAGAGGTGGTTAAGGCTGAGGAGGTGGAGGA
GAAGGTCAGATGGGTTATGGCGTCCGAG---GGAGGCACGGCACTCAGGGTGCGGGTAGCGGCAGTGAAGGATGCGGCGG
CTGAGGCGCTCCAGGAAGGGGGCTCGTCCAACTTGGCGTTTGCCCAATTCCTAAAAGACGTGGATGTGAAGCTTGTAAAC
CTACTTAATGCTGGATTTTCTTTTTAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_1_TraesCS3B01G313900
TTGTTAGCTATTAATACTCCCTCCGTCCCTAAATACTTGTCGGAGAGATGGATAAAATTGGATGTATCTATAACTAAAAT
ACGTCTAGATACATCCATTTCTCCGACAAGTATTTAGGGACGGAGGGAGTATTTGGTAATGACACCAATGATAAATAGAT
AAATGCAACCAGAAATATGTGTAAAATGAAGTGCGGCCTTCCTATTCCTGTTTATTTTGTCCATAAAAATTTTCATTTTA
AAAGCATGACAACACAAGGTTTGGATGCTGGCACCGCCAATGATTGGATAGGTGTAGCGATAGTTGTTGCTTAGACGGTG
GTTTTAGTCTTGTTGTTGTATGACTTTGTAAGGTCTTGTAAGAATAATTAATAAAGTGACCGTATGCATCGCCCAGATGC
AAAGGCCGGAGGTCATCCTTCTTTTTTTAAAAAAAGTGCTTTTTAGTTTTGCTGAACCCTGAATCTGTTGAAAAGAACTC
ATTCATTACGTCACTGCAGCAGTAAGGGTCGTGGTCGCAGATACGTACCGGTATCAATAACGGCAGACGATGGGCGATCG
GCAGGTTGAGTAGGAGAAATGTATTTTGTGCTCGTGG--------CAATGCTCTGAAGAGTGAGCAAACAAAGCCTTCTA
GAAGAAAGACGGCTTCGATACGAAGAGCAGATCGGCATTGCGGAAACTCGCGTGAAAAAGGCTCCACGGAGAGTACCGTC
ACGGATGACGTTGCCACTCCCAAAGGCGCCACTCTAGATGAGATGAGGACAGTGGAGCTGCCCCT-TTACGACGGCGGCT
TCAGGCACCGTGACAGAGCTTAAATTCTGTCGCGC--------------------------------GGCCATGCATTGC
TCTACCAGACCACCCCCATGTCCAAATTTGACTGGATTCGAGCGGGCCACACTATATTATCCC-CGGT-CCCGGTGGGTT
TGTTTGCAGGGCGGCAGAGCAGAGGCACAACAT-CAGACCAACCC-AAAACCATTTCGTACTAGCTA----GAAGAGTGA
---AGTGAAGCGATGAAGAAGACCGTGGTCCTGTACCCTGGCCTCGGCGTCGGCCACCTGGTGCCGATGGTCGAGGTTGC
CAAGCTGTTCCTCAAGCACGGCCTGGCCGTCACCTTGGCGCTCGTCGAGCCGCAGGTCAAGTCCACGGACTTCTCCGCCG
CGGTCGCCCGCGCGAGGGCCTCCAACCCCTCCGTCGACTTCCACGTCCTGCCGTCGCCGCCCGCCGATTCCAACCCCGAC
AGCGGGCCCAGGCACCACGTCGTCAAGGTTATCCTCCCGCCGCCCGCCGTCCTGCCGTCGCCGCCCGCCGCCATGAACGC
GCCCCTCCGCGACTTCCTCCGCTCGCTGCCCGCCGTCCACGCGCTCGTCCTCGACATGTTCTGCGTCGACGCCCAGGACG
TCGCAGCCGAGCTCAAGCTGCCGGTCTACTACTCGTTCGCCTCCGCTGCCGGCGACCTCGCCATCTTCCTCAACCTGCCG
AGCAAGTTCGCCAGCAATACGGCCAAGGTAAAAGAGCTCGGCGACTCCATCATCACCTTCCCGGGTGTTCCTCCTTTCAA
GGCTTCGGAGCTGCCGTCCGAAGTTATCGCCGACGATGAAGCACTCGTGTACGTCTTACGCATGTTTCAGCGAATGGCGG
AGGCGAAAGGAATTCTTATAAATTCCTTCGACTCGCTGGAAAAGCCCGCACTGAGCGCTCTCAGCGAAGGACTTTGCGTC
CCTGGTCGTGCGACGCCGCCGGTCTACTGCATCGGGCCGTTGGTCTCTGGAGGCGGAGACAAGGAGCACGAGTGCCTCCG
CTGGCTGGACGCGCAGCCGGACCAGAGCGTAGTGTTCCTCTCCTTCGGCAGCCTGGGCACATTCACCAGTAAGCAGCTAG
AGGAAATTGCAATTGGTTTGGAGAAGTCAGGGGAGAGGTTCCTGTGGGTTGTGCGGAGCCCGCGCAGTCCCGACCAGAAG
CACGGGGATCCGCTGCCGGAGCCTGACCTCGAGGCGCTCATGCCGGAAGGGTTCTTGGAGAAGACCAAGGACAGAGGGCT
CGTGGTGAAGTCTTGGGCGCCGCAGGTGGAGGTCCTGCGTCACAGGGCAACCGGCGCATTCATGACGCACTGCGGCTGGA
ACTCGACACTGGAGGGCATCACGGCAGGGTTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTTGGGGTGGAGATGAGAGGCTACAATGAAGAGGTGGTTAAGGCTGAGGAGGTGGAGGA
GAAGGTCAGATGGGTTATGGCGTCCGAG---GGAGGCACGGCACTCAGGGTGCGGGTAGCGGCAGTGAAGGATGCGGCGG
CTGAGGCGCTCCAGGAAGGGGGCTCGTCCAACTTGGCGTTTGCCCAATTCCTAAAAGACGTGGATGTGAAGCTTGTAAAC
CTACTTAATGCTGGATTTTCTTTTTAGAAACACACTGCAGACGCACAAAACCCAGAGGATATTCTTCCATGCAGATGTAT
AAGCACATGATGGGAATTAACAATGCTCATACTTCATTCAAAGACATGGAAAACCACCTGCAGATTGAGACACAAGATCT
CTTTTTGGCTGCTCATTCATGATAAGGTTAATACCAGAAACCTCCTTCACCGAAAGATTATGCACTTGGACAACTATAAC
TGTCCAATCTGTGTGGATGACACAGAAGAAACTTTGTTGCACCTCTTCTGGAATTGCCATTTTGCTCTTCAGTGCTAGGA
CCGTATTATCCCAAATAGAAACAGAGGAATCTCAGTGTTTGATGACATTCAACTTGCACTACTTCAGCTTCCATAGGACA
TTGCCTTGGACATTGTTATTATGGAATGCTGGGGTATCTGGTCGACCAGAAATGATAAGATCTTCAAGTTGCTGCTCCTC
ACATTACTGTACTTGCAAGATGGCCTATGGGCCGGCCAGATCAAAGCCAAGCCGGCCAAAGCTGAATAGATCCGAATTTG
GGTAGAATAAAACTTGTAATTTTTTGATGATCCTGTTGCCCAGAACTGGAATTGATTGACTGCTTTACCACTTTTCTTGT
ATTTGTATATATGATTTATTAATGAGAATTGCCGTAAAACAATTGTTCTACTGTTTGTGGTACAAAAAGACACTTGAGTC
TGGGTGGGCTGATTCTACCACAAGGAACCTAATCATGTAAGGTAGCTATACTTAGCTGGCCTATCTAATGCTGGATTTGT
TGCCTGCTACGTATATTTTGATGTTATATGCGGTTTATTTAGCTATGCTTAGTTCGCCTATCTAATGTTGGATTTGTTGC
CTTCTATGTATATTTTGATATTATACGTGTGGTCAGTTTATTTCTGGACCCTCTCAAAAATAATGATTATCCTGCTCGAA
AAGAGACATTTGCACTTTAATTTCTTCTGAGCATTGAATTGTTGTGTATACTTTTATTTGTGTATGC
>chr3D_471
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAAAGAACTC
GTTCATTGCGTCACTGCAGCAGTTAGGGTCGTGGTTGCACATACGTATCGGTATCAGTAACGGCAGCCATTGGGCGATCG
GCAGGTTGAGTAGGAGAAATGTATTTTGTGCTCGTGG--------CAATGATCTGAAGAGCGAGCAAACAAAGCCTTCTA
GAAGAAGA-CGGCGTCCATACGAAGAGCAGATCGGCATGGCGGAAACTCGCGGGAAAAAGGCTCCACGGAGAGTACCGTC
ACGGATGACGTTCCCACTCCCAAAGGCGCCACTCTGGATGAGATGAGGACAGTGTGGACCTGTCTCTTACGACGGCGGCT
TGAGGCACCCTAACAGAGCTTAAATTCTGTCGAGATGTGTCGCTGAGGTCAGCTCACGGTCTCACCGGGCCATGCACTGC
TCAACCAGACCACCCCTATGTCCAAATTTGACTGGATTCGAGCCGGCCACGCTATATTATCCC-CGGACCCCGGTGGGTT
TGTTTGCAGGGCGGCAGAGCACAGGCACAACAC-CAAGCCAACCC-AAAACCATTTCGTA----CTA----GAAGAGTGA
---AGCGAAGCGATGAAGAAGACCGTGGTCCTGTACCCTGGCCTCGGCGTCGGCCACCTGGTGCCGATGGTGGAGGTCGC
CAAGCTGTTCCTCAAGCACGGCCTCGCCGTCACCATGGCGCTCGTCGAGCCGCAGGTCAAGTCCACTGACTTCTCCGCCG
CGGTCGCCCGCGCGAGGGCCTCCAACCCCTCCGTCGCCTTCCGCGTCCTGCCGTCGCCGCCCGCAGATTCCAACCCCGAC
GGCGCGCCCAGGCACCACGTCGTGAAGGTTATCCAATCGCT------------------------CGCCGCCATGAATGC
GCTCCTCCGCGACTTCCTCCGCTCGCTGCCCTCCGTCCACGCGCTCGTCCTCGACATGTTCTGCGTCGACGCCCAGGACG
TGGCAGCCGAGCTCAAGCTGCCGGTCTTCTACTCATTCGCCTCCGCTGCCAGCGACCTTGCCATCTTCCTCAACCTGCCG
AGCAAGTTCGCCAGCAATACGGCCAAGATAAAAGAGCTCGGCGACTCCATCATCACCTTCCCGGGCGTTCCTCCTTTCAA
GGCTTCGGAGCTGCCCTCCGAAGTTATCGGCGACGATGAAGCACTCGTGTACGTCTTACGCATGTTTGAGCGAATGGCAG
AGGCGAAAGGAATTCTTATCAATTCCTTCGACTCGCTGGAAAAGCCCGCACTGAGCGCTCTCAACGACGGACTTTGCGTT
CCTGGTCGTGCGACGCCGCCGGTCTACTGCATCGGGCCGTTGGTCTCCGGAGGCGGAGACAAGGAGCACGAGTGCCTCCG
CTGGCTGGACGCGCAGCCGGACCAGAGCGTGGTGTTCCTCTCCTTCGGCAGCCTGGGCACATTCACCAGTAAGCAGCTCG
AGGAAATTGCAGTTGGTCTGGAGAAGTCAGGGGAGAGGTTCCTGTGGGTTGTGCGGAGCCCGCGCAGTCCCGACGAGAAG
CACGGCGATCCGCTGCCGGAGCCTGACCTCGACGCGCTCATGCCGGAAGGGTTCTTGGAGAGGACCAAGGACAGAGGGCT
CGTGGTCAAGTCTTGGGCGCCGCAGGTGGAGGTTCTGCGTCACAGGGCGACCGGCGCATTCATGACGCACTGCGGCTGGA
ACTCGACGCTGGAGGGCATCACGGCAGGGTTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTCGGGGTGGAGATGAGAGGCTACAATGAAAAGGTTGTTAAGGCCGAGGAGGTGGAGGA
GAAGGTCAGATGGGTTATGGCGTCCGAGGGAGGAGGCAGGGCACTCAGGGTGCGGGTAGCGGCAGCGAAGGATGCAGCGG
CTGAGGCGCTCCAGGAAGGGGGCTCGTCCAACTTGGCGTTTGCCCAATTCCTAAAGGACATGGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3A_531
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTATCAATAATGGCAGTCGATGGGCGATCG
GCATG-TGAGTAGGAGAAATGTAACTTGTGCTCGTGGGCTCGTGGCAATGCTCTGAAGAGCGAGCAAACAAAGCCTTCTA
GAAGA-AGCCGGCGTCGATCCGAAGAGCAGATTGGGATGACGGAAACTCGCGGGAAGAAGGCTCCACGGAGAGTACCGTC
ACGGATGACGTTACCACTCCCAAAGGCGCCACTCTGGATGAGATGAGGACTGTGGAGCTGTCCCT-TTACGACGGCGGCT
TCAGGCACCGTGTCAGAGCTTAAATTCTGTCGAGATGTGTCGCTGAGCTCAGCTCACGGTCTCACGTCGCCATGCATTGC
TCTACCAGACCACCACCATGTCCAAATTTGACTGGATTCGAGCAGGCCACACTATATTATCCC-CGTT-CCCGGTGGGTT
TGTTTGCAGGGCGGCAGAGCAGAGGCACAACACACAAACCAACCC-AAAACCATTTCCTA----CTAGCTAGAAGAGTGA
---AGTGAAGCGATGAAGAAGACCGTGGTCCTGTACCCTGGCCTCGGCGTCGGCCACCTGGTGCCGATGGTGGAGGTCGC
CAAGTTGTTCCTCAAGCACGGCCTCGCCGTCACCGTGGCGCTCGTCGAGCCGCAGGTCGAGTCCACGGACTTCTCCGCCG
CGGTCGCCCGCGCGAGGGCCTCCAACCCCTCCGTCGCCTTCCACGTCCTGCCGTCGCCGCCCGCAGATTCAAACCCCGAC
GGCGCGCCCAGGCACCACGTCGTCAAGGTTATCCAATTGCT------------------------CGCCGCCATGAATGC
GCCCCTCCGCGACTTCCTCCGCTCGCTGCCCGCCGTCCACGCGCTCGTCCTCGACATGTTCTGCGTCGACGCCCAGGACG
TCGCGGCCGAGCTCAAGCTGCCGGTCTACTACTCGTTCGCCTCCGCTGCCGCCGACCTCGCCATCTTTCTCAACCTGCCG
AGCAAGTTCGCCAGCAATACGGCCAAGGTAAAAGAGCTCGGCGACTCCATCATTACCTTCCCGGGTGTTCCTCCTTTCAA
GGCTTCGGAGCTGCCCTCCGAAGTTATCGGCGACGATGAAGCGCTCGTGTACGTCTTACGCATGTTTGAGCGAATGGCAG
AGGCGAAAGGAATTCTTATCAATTCCTTCGATTCGTTGGAAGAGCCCGCACTGAGCGCTCTCAACGACGGACTTTGCGTC
CCTGGTCGTGCGACGCCGCCGGTATACTGCATTGGACCGTTGGTCTCGGGAGGCGGAGATAAGGAGCACGAGTGCCTCCG
CTGGCTGGACGCGCAGCCGGACCAGAGCGTGGTGTTCCTCTCCTTCGGCAGCCTGGGCACATTCTCCAGTAAGCAGCTCG
AGGAAATTGCAGTTGGTTTGGAGAAGTCAGGGGAGAGGTTCCTGTGGGTTGTAAGGAGCCCGCGCAGTCCCGACCAGAAG
CACGGCGATCCGCTCCCGGAGCCTGACCTCGACGCGCTCATGCCGGAAGGGTTCTTGGAGAGGACCAAGGACAGAGGGCT
CGTGGTGAAGTCTTGGGCGCCGCAGGTGGAGGTCCTGCGCCACAGGGCGACCGGCGCATTCATGACGCACTGCGGCTGGA
ACTCGACGCTGGAGGGCATCACGGCAGGGTTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTCGGGGTGGAGATGAGAGGCTACAGTGAAGAGGTGGTTAAGGCCGAGGAGGTGGAGGA
GAAGGTCAGATGGGTTATGGCGTCCGAGGGAGG---CATGGCACTCAGGGTGCGGGTAGCGGCAGCGAAGGATGCGGCGG
CTGAGGCGCTCCAGGAAGGGGGCTCGTCCAACTTGGCGTTTGCCCAATTCCTCAAAGACATGGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_858
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TGTCCAAATTGGATAGAATTCCACGAGCCC-CACTATATAGTAGCACGGT-CCAGGTGGGTT
GTTCGT-------GGAGCTGAGCAGCACAGAGC-CAAACCAACCAAAAAAGCATTTCGTA----CTA----GGACTTTAC
GAGAGTGAAGCCATGAAGAAGACCGTTGTCCTGTACCCTGGCGTCGGCGTCGGCCACCTGGTGCCGATGGTGGAGGTCGC
CAAGCTGTTCCTCAAGCACGGCCTGGCCGTCACCGTGGTGCTCATTGATCCGCAGGCCGAGTCCACGGACTTCTCCTCCG
CCGTCGCCCGCGCGAGGTCCTCCAACCCCTCCGTCGCCTTCCACGTCCTGCCGCCGCCGCCCGCGGATTCCAACTCCGAC
ACCGCGCCCACGAACCCCGTCATCCAGATTTTCCGGCTCCT------------------------GAAATCCATGAACGC
CCCCCTCCTGGACTTCCTCCGCTCGCTGCCCTCAATTGACGCACTCGTCCTCGACATGTTCTGCGTCGACGCCCAAGATG
TCGCGGCTGAGCTCAAGCTGCCGGTTTACTACTTCTACGCGTCGGCCGCCGCCGACCTCGCGCTCTTCCTCAACCTGCCG
AGCAAGCTTGCCGGCAGT------AAGGTGAAGGAGCTCGGCGACTCTATCATGACTTTCCCGGGTGTTCCTCCGTTGAA
AGCTTCGGACTTAC---CCGAAGTTACCCACAACGATGAAATACTCAAGGCCATCTTGGGCATGTTCGACCGAATGCCAG
ATGCCAACGGAATTCTCATTAATTCCTTCGAGTCGCTGGAGACGCGGGCGGTGCGCGCTCTCAAGGACGGGCTCTGCGTC
CCTGGTCGTGCCATGCCACCGGTCTACTGCATCGGGCCTTTGGTGTTGGGAGGCGGTGACCAGGAGCACGAGTGCCTCCG
GTGGCTGGACGCGCAGCCGGACCAGAGCGTAGTGTTCCTCTCCTTCGGCAGCATGGGCACGTTCTCCGGTAAGCAGCTCC
AGGAGATTGCAAGTGGATTGGAAAAGTCAGGGGAGAGATTCCTGTGGGTCGTGCGGAGCCCGCGCAATCCCGACTACAAG
TACGGCGATTCGCTGCCGGAGCCCGATCTCGACGCGCTCATGCCGGAAGGGTTCTTGGAGAGGACCAAGGACAGAGGACT
CGTGATCAAGTCTTGGGCGCCACAGGTGGAGGTCCTGCGCCACAGGGCGACCGGCGCATTCATGACACACTGCGGCTGGA
ACTCGACACTGGAGGGCATCACGGCAGGGTTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTCGGGGTGGAGATGAGAGGCTACAACGAAGAGGTGGTTAAGGCCGGGGAGGTGGAGGA
GAAGGTCAGGTGGGTTATCGCGTCCGAGGGCGG---CAAGGCGCTCAGGGAGCGGGTGGCGGCGGCGAAGGATGCAGCTG
CCGAGGCGCTCAAGGAAGGGGGCTCGTCTCACTTGGCGTTTGTCCAATTCCTCAACGACCTGGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3A_954
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ACCAACCCAAAAAGCATTTGGTA----CGA----GGACTCTAG
GAGAGTGAAGCCATGAAGAAGAGCGTTGTCCTGTACCCTGGCGTCGGCGTCGGCCACCTGGTGCCGATGGTGGAGGTCGC
CAAGCTCTTCCTCAAGCACGGCCTGGCCGTCACCGTGGTGCTCATCGACCCGCAGGTCGAGTCCACGGACTTCTCCTCCG
CCGTCGCCCGCGCTAGGGCCTCCAACCCCTCCGTCGCCTTCCACGTCCTGCCAACGCCGCCCGCCGATTCCAACTCCGAC
ACCGCGCCCACCAACCCCGTCGTCCAGATTTTCCGGCTCCT------------------------GAAATCCATGAACGC
CCCCCTCCTCGACTTCCTCCGCTCGCTGCCCTCCGTCGACGCACTCGTCCTCGACATGTTCTGCGTCGACGCCCAAGATG
TCGCCGCCGAGCTCAAGCTGCCGGTCTACTACTTCTACGCGTCGGCCGCCGCCGACCTCGCGCTCTTCCTCAACCTGCCG
ACTATGCTCGCCGGCAGT------AAGGTAAAGGAGCTCGGCGACTCTATCATCACTTCCCCGGGTGTTCCTCCGTTGAA
AGCTTCGGACTTAC---CCGAGGTTACACACAACGATGAAGTACTCAAGACCATCTTAGGCATGTTCGACCGAATGCCAG
ATTCCAATGGAATTCTCATTAATTCCTTCGAGTCGCTGGAGACGCGCGCGGTGCGCGCTCTTAAGGACGGGCTCTGCGTC
CCTGGTCGTGCCACGCCGCCGGTCTACTGCATCGGGCCTTTGGTGTCGGGAGGCGGTGACCAGGAGCACGAGTGCCTCCG
GTGGCTGGACGCGCAGCCGGACCAGAGCGTAGTGTTCCTCTCCTTCGGCAGCATGGGCACGTTCTCCGTTCAGCAGCTAC
AGGAGATTGCAAATGGATTGGATAAGTCAGGGGAGAGATTCCTGTGGGTCGTGCGGAGCCCGCGCAATCCCGACTACAAG
TACGGCGATTCGCTGCCGGAGCCCGATCTCGACGCGCTCATGCCGGAAGGGTTCTTGGAGAGGACCAAGGACAGAGGACT
CGTGATCAAGTCTTGGGCGCCGCAGGTGGAGGTCCTGCGCCACAGGGCGACCGGCGCGTTCATGACGCACTGCGGCTGGA
ACTCGACGCTGGAGGGCATCACGGCAGGGCTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTCGGGGTGGAGATGAGAGGCTACAACGAAGAGGTGGTTAAGGCCGAGGAGGTGGAGGA
GAAGGTCAGGTGGGTTATGGCGTCCGAGGGCGG---CAAGGCGCTCAGGGAGCGGGTGGCGGCGGCGAAGGATGCAGCTG
CCGAGGCGCTCAAGGAAGGGGGCTCGTCTCACTTGGCGTTTGTCCAATTCCTCAACGACCTGGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3D_992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGTGAAGCCATGGAGAAGACCGTTGTCCTGTACCCTGGCGTCGGCGTCGGCCACCTGGTGCCGATGGTGGAGGTCGC
CAAGCTGTTCCTCAAGCACGGCCTGGCCGTCACCGTGGTGCTCATCGATCCGCAGGTCGAGTCCACGGACTTCTCCGCCG
CCGTCGCCCGCGCGAGGGCCTCCAACCCCTCCGTCGCCTTCCACGTCCTGCCGCCGCCGCCCGCCGATTCCAACTCCAAC
AGCGCGCCCACGCACCCCGTCATCCAGATTTTCCGGCTCCT------------------------GAAATCCATGAACGC
TCCCCTCCTCGACTTCCTCCGCTCGCTGCCCTCCGTCGACGCACTCGTCCTCGACATGTTCTGCGTCGACGCCCAAGATG
TCGCGGCCGAGCTCAAGCTGCCGGTCTACTACTTCTACGCGTCGGCCGCCGCCGATCTCGCGCTCTTCTTCAACCTGCCG
AGCAAGCTCGCCGGCAGT------AAGGTAAAGGAGCTCGGCGACTCTATCATCACTTTCCCGGGTGTTCCTCCGTTAAA
GGCTTCGGACTTAC---CCGAAGTCACCCACAACGATGAAGTACTCAAGGCCATCTCAGGCATGTTCGACCGAATGCCAG
ATGCCAACGGAATTCTCATTAATTCCTTCGAGTCGCTGGAGACGCGGGCGGTGCGCGCTCTCAAGGACGGGCTCTGCGTC
CCTGGTCGTGCCACGCCGCCGGTCTACTGCATCGGGCCGTTGGTTTCGGGAGGCGGAGACAAGGAGCACGAGTGCCTCCG
GTGGCTGGACGCGCAGCCGGACCAGAGCGTGGTGTTCCTCTCCTTCGGCAGCATGGGCACGTTCTCCGGTAAGCAGCTCG
AGGAGATTGCAACTGGATTAGAAAAGTCAGGGGAGAGATTCCTGTGGGTCGTGCGGAGCCCGCGCAATCCCGACTACAAG
TACGGCGATTCGCTGCCGGAGCCCGATCTCGACGCGCTCATGCCGGAAGGGTTCTTGGAGAGGACCAAGGACAGAGGGCT
CGTGATCAAGTCTTGGGCGCCGCAGGTGGAGGTCCTGCGCCACAGGGCGACCGGCGCATTCATGACGCACTGCGGCTGGA
ACTCGACGCTGGAGGGCATCACGGCAGGGTTGCCGCTGCTGTGCTGGCCGCTGTACGCGGAGCAGAAGGTGAACAAGGTG
CACATAGTGGAGGGAATGAAGCTCGGGGTGGAGATGAGAGGCTACAACGAAGAGGTGGTTAAGGCCGAGGAAGTGGAGGA
GAAGGTCAGGTGGGTTATGGCGTCCGAGGGCGG---CAAGGCGCTCAGGGAGCGGGTGGCGGCGGCGAAGGATGCAGCTG
CCGAGGCGCTCAAGGAAGGGGGCTCGTCCGACTTGGCGTTTGTCCAATTCCTCAACGACCTGGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
S------S---------------S-----------S---S-------S------------------S-------------
------------------------------------------------------------S-------------------
--------S----S------------------------S-------------S---------------------------
------------S----------------------S------------------------S-------------------
--------------------------------S-S---------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------S---S-----------------------SSSS----------------
-----------------------------------------------------------------------S-----S--
----------------------------------S---------------------------------------------
------------------------------------S-------------------------------------------
----S-----------------------------SS----SSSSSSSSSSSSSSSSSSSSSSSSS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------------S-------------------------------------S----------S-
-------------------S-------------------------------------------S---S------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------S----------------------------S------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------------------S--------------
--------------------------------------S--------------------------S--------------
-----------------------------------------------------------S----SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CACAAGGTTTGGATGCTGGC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2306
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TGAGGAGGTGGAGGA
GAAGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_679
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ACGAAGAGCAGATCGGCATT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2521
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ACGCACAAAACCCAGAGGAT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
