>input_sequence_51123
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---------------------ATGGATATGGCGCACGAGAGGGACTCGAGCAGCGAGGAGGAGGTGATGGCCGGCGACCT
CCGCCGCGGGCCGTGGACGGTGGAGGAGGACATCCTGCTCGTCAACTACATCGCCGCTCACGGCGAGGGCCGCTGGAACT
CGCTCGCCCGATCAGCAGGTAGGATCATTGCACTGCACAATCCAATCCATGCATGCATGCTGATGCTGGTCTTTCAAGTG
CTAGCT--------GTAGTAGATTGGTTGCTTGCATCATTTTGTTTCCGCGAGAAGTGCGTGAGGCTTAGATATTTCTAG
TA-------TATCATGGATGGAGGGGGAAGCAACAAACCTGTCGCTCTGCATCACCATGCTAATATATGGAAACAGATAG
CTACGAACCTACTGCCTGATTTGTCTAGCCGGAAGCT-----------AGCTATAGTGAATGAGAGAGATGGAGGGAGAG
GGGAAGAA---TTTTTAGTGGTTAGCATTATTCCCAGCCATAGGGATATTTA-TTACTAATCTCTCCTCCATTACATCAC
CCGTCTCGTCACATACATGCTCCGCATCCGCATCCGCATCCGCATAAGTAATCAGCAAGTTGGCGAATTTATATTTGTTA
GTAGCAACCACTGATGTGATGTTCCATTCATTCCAT-----GTGATTAATCTTGCC------TTGCGTACCAGGTCTGAA
GCGCACCGGCAAGAGCTGCCGCCTCAGGTGGCTCAACTACCTCCGCCCCGACCTCCGGCGCGGCAGCATCACCCCGCAGG
AGCAGCTGCTCATCCTCGAGCTGCACTCGCGGTGGGGCAACCGCTGGTCCAAGATCGCGCAGCACCTCCCCGGGCGCACC
GACAACGAGATCAAGAACTACTGGCGCACGCGCGTGCAGAAGCACGCCAAGCAGCTCAAGTGCGACGTCAACAGCCAGCA
GTTCAAGGACGTCATGCGCTACCTCTGGATGCCCCGCCTCGTCGAGCGCATCCAGGCCGCCGCCACGGCCGACGCGGTGC
AGGCCGCCGCTGACACGCCCCTGTCGTGGCAGCACGGCGCCGACGACGCTCTCTACGAGTCACCGGAGCTCCCTGTCGAC
GCGTGCTGGCCAACGGAGTACGCCGCCGTGGCCGGCGGGCAGCTGCCCAACGCCTCGGTCGCGGAGCTGTCGAGCACTAC
TACCGCCGGCTCTTCCTCGCCGTCCACCACGGACTCTGGCGCCGGCGCCCAGCCCAGCTGGCCTGCAGCAGTCGACGGTG
CCGAGTGGTTCACCACCGCCTGCGACGCCTCCAGCGCCGCCGCCACCATATGCGACACGGACCAGCTGATCCA-------
--GCAGCAGGCACCGTCCCAGCCCGCGGGTGCGTGGACGTCCGAGCCGCTGCCGAGCCTCGGGTTCCCCGAGCTGGGCGT
CGCGGACTTCGAGATGGGCAGCTTCGACGTAGACAGCATCTGGAGCATGGACGACTTGTGGAACACGCAGCCGCAGTTCG
TGTGA---------------------------------------------------------------------------
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-------------------------
>chr4A_1_TraesCS4A01G124900
TACGGTCGAACAGGCAATAGTATTTACCTGCAAAAAAGAAAG--AAAAAATAGGCAGTAGTATTCCCTCCCTTTCTACAC
AG------------------------------------------------------------------------------
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-------------------------------------------------------------------------GAAGCAG
AGCTGTCTACTCCTGGCTGGCAAAAACGAGATCGCCCTGGCTGTCACCCAAAAGCGAAGAGAAGAGAAG-----------
-AGGTCCACAGCGCGAGCGCGTGGCCATCGTGGGGAGGAACTCTG----TGCAGCGCGAGTGCGAGTGAGCTAGTAGCAG
CACTTGAAATGGAGGCGAGTCAATTAGTCAAACTCCCACGACTTCAAATCCGTGTACGCGAGCGCGCGCGAGCCGGTTTA
ATTAATTTTAGCTGCGTGGCCAATTAGCCCGGTAAATATCCCACCACGCTTCCCCTCATCCATCCCTAAGACTGGTCATA
GTGAGGAGTAACTTAGACTAGTATCATATACATGATACTAGTCTAAGTTACTATGCAAAGTAACATGATAATAGTGTCAT
AGATGATTTTATTTATTAGCTTATAGACTTATTTTGTCTTGAAAAACGCTACGTTACATTAACATATTATGTTACCACCT
CACATTAAATACTTGCCACATAAGCAAAAATTTCTTAGAGTGTGCTATGTTACTAGCTAAGTTACTCCCACTATGACTAG
CCTAATAAAGCACGATTAATTCTAGTACCCCTAAACTTTTGGCTTTGAAAGATAGAA----------------TAATCTC
CGTATTTGCGGCGTGCTCCCCCACATGCTTCTTCCCAAGTCCACCACAGCTCCCCCACCTCCTGCTTCCCTCGCCGCCCG
TCTATATAAGCTTCCTCATTCCTCTCCCGCCCAATCCATCACTCGCACCCCGCGAATACTCTTCTCTTCCCTTCTCTTCT
CTTCTCTTCTCCGCACAGCATCACTGCCTCCGGCCGTGTC-GAGCAAACCAAACCAAAATCTCCTGAGTTGTC-------
------------------------TCGCTCGCCTCATCAATCCTTGGCGTCGCTAGCTTCATCTGGAGGCGAGGAGGCGG
ACGGTTTGAAC----CCGATCATGGATATGGCGCACGAGAGGGACTCGAGCAGCGAGGAGGAGGTGATGGCCGGCGACCT
CCGCCGCGGGCCGTGGACGGTGGAGGAGGACATCCTGCTCGTCAACTACATCGCCGCTCACGGCGAGGGCCGCTGGAACT
CGCTCGCCCGATCAGCAGGTAGGATCATTGCACTGCACAATCCAATCCATGCATGCATGCTGATGCTGGTCTTTCAAGTG
CTAGCT--------GTAGTAGATTGGTTGCTTGCATCATTTTGTTTCCGCGAGAAGTGCGTGAGGCTTAGATATTTCTAG
TA-------TATCATGGATGGAGGGGGAAGCAACAAACCTGTCGCTCTGCATCACCATGCTAATATATGGAAACAGATAG
CTACGAACCTACTGCCTGATTTGTCTAGCCGGAAGCT-----------AGCTATAGTGAATGAGAGAGATGGAGGGAGAG
GGGAAGAA---TTTTTAGTGGTTAGCATTATTCCCAGCCATAGGGATATTTA-TTACTAATCTCTCCTCCATTACATCAC
CCGTCTCGTCACATACATGCTCCGCATCCGCATCCGCATCCGCATAAGTAATCAGCAAGTTGGCGAATTTATATTTGTTA
GTAGCAACCACTGATGTGATGTTCCATTCATTCCAT-----GTGATTAATCTTGCC------TTGCGTACCAGGTCTGAA
GCGCACCGGCAAGAGCTGCCGCCTCAGGTGGCTCAACTACCTCCGCCCCGACCTCCGGCGCGGCAGCATCACCCCGCAGG
AGCAGCTGCTCATCCTCGAGCTGCACTCGCGGTGGGGCAACCGCTGGTCCAAGATCGCGCAGCACCTCCCCGGGCGCACC
GACAACGAGATCAAGAACTACTGGCGCACGCGCGTGCAGAAGCACGCCAAGCAGCTCAAGTGCGACGTCAACAGCCAGCA
GTTCAAGGACGTCATGCGCTACCTCTGGATGCCCCGCCTCGTCGAGCGCATCCAGGCCGCCGCCACGGCCGACGCGGTGC
AGGCCGCCGCTGACACGCCCCTGTCGTGGCAGCACGGCGCCGACGACGCTCTCTACGAGTCACCGGAGCTCCCTGTCGAC
GCGTGCTGGCCAACGGAGTACGCCGCCGTGGCCGGCGGGCAGCTGCCCAACGCCTCGGTCGCGGAGCTGTCGAGCACTAC
TACCGCCGGCTCTTCCTCGCCGTCCACCACGGACTCTGGCGCCGGCGCCCAGCCCAGCTGGCCTGCAGCAGTCGACGGTG
CCGAGTGGTTCACCACCGCCTGCGACGCCTCCAGCGCCGCCGCCACCATATGCGACACGGACCAGCTGATCCA-------
--GCAGCAGGCACCGTCCCAGCCCGCGGGTGCGTGGACGTCCGAGCCGCTGCCGAGCCTCGGGTTCCCCGAGCTGGGCGT
CGCGGACTTCGAGATGGGCAGCTTCGACGTAGACAGCATCTGGAGCATGGACGACTTGTGGAACACGCAGCCGCAGTTCG
TGTGAAAAGTCAAGACGGTGGCATGGAAATCCTCAGCTGCGACGGTGCCCGCGGGGGGGCGTGCGGCC------TCCGGG
TCCGGGGACGCGTAGCAGATCCAGCGGAGGGAAACGGATTAGAAGAAGAAGGAGAGGAACCACCTGGGACTGGGAGGATT
AAAACAAGACTAATTTACCCTGCACGTGAAGATCTCCCGGCCTGTTCTGCTCCAGTTCTGCGCCGTCTTGTCTCCTGTGT
TAAT---TTATTACTACGTACAAGGGTAAACAGATACGTAAAAGTGTAGCAGAAGCAGATGATCTACTAGTGTTAGCTGT
GCCGCCGTTAATTATGCTATGTTCCGTTTAATCTTACTCATTCTTTT---------------------------------
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-------CGAGTGATTACTACTACATA---TATAAGTATAAAGGAGGAAGTACTAGTATATGAAGTGAACTGTTGATAGG
AAC--------TGTAGTTTCTAGAAGTGGTAATAAAAGCAATGCTCCGACGTCAAGTCATGGTTAAATTCGTACTGCGAG
CATAGCATTCCGCCCATTTCTCGCCGCTAATTGTGATCCTCGCGCACTTGAATTCCAAGTGACGAGAGGTTTTTTTCTCC
TTTTTCTTTTTCGCTGCGGTTGTTTGCTATGATTACGATGACGGCGACCGCGCTGGGTCGATAGATTTGTTTATGCCGAC
ATGGATGTTTTATACTCCCTCCATTTCAAAATATAGTACGTCTGCGTTTTCTGAGGTCCAACTTTGACCATAAATTTAAC
CAACAAGACCAACTGCGGTGGGAGAAAAATTATATAATTGAAAACTTCTTTTGAATACGAATTCACTGATATAATTTTTG
CTCCCGCCGCAATCGGTAGTTAAATTTACGGTCAAATTTGAAGCACGAGAATAGAGTAAGCACTATATTGTGGAATGAAG
GGAGTACCAGAAATTCAGTACGAGCGGTGCTGTTACATCAGCGCCAACAGTTCCCAGATGTGATCTGCATGGCCGCTGCA
TTACACTTGTTGTCCTCGTAGCAAC
>chr4B_1
TACGGTCGAACAGGCAGTAGTATTTACCTGAAAAAAAGAAGAAAAAAGAAGAGGCAGTAGTATTCCCTCCCTTTCTACAC
AGGAAGCAGAGCTGTTGACGGGAAAAGAAAACGCCCCCGCGTCGCTCCCGTGCGAGCGACACGGGCGGACTCTGCAGCCC
TAGCCGCCGCCGCCAGTATCCCAGCCACCCCTCTCCGCCGCCGCCGGAGGACGCCGCAAGGCGAAGCCTCGCGGCCGACG
GCGGCGGCGGGGGACCTTGCTCGTGGCGCTGGGGGGCACTCGGCACGGCGGGTCGTCTCCCGGTTATCTGCGCGTTGCCG
TGGCGCTGGTGTCCGGATCCGCCCGATCTGATGCATCCGGCTCTGGCTGCCATGGTCTTCGCTGGTGAGGGCCTGGATCT
GAGGCGGCGGCCACGCTGGTGCGGACGGCGCTCCTTCGGCGGCGGGGAGTGCTCGTCGGTGAGGTAGGCCGGATCCCCTC
GGCTGCGCGGGCAGCGAGGTTCCGGTGGGCGCTGGTCATGGCGCGGGAGGCCCCGGGCTCCCCTCGTCAGATCGGAGGCG
ATCTGGTCCGCTCGTGATGCATGACCTCCGGCCGGCCTGGATCTCCGGCGTGCACGCGCCTGCTGATGTTGTTGCTGGTT
CGGAGGTGGCGGCAGGGTGCTTGGCCGGGGGAAACCCTTGGCCGCCGGTGGCGGTCACGACGTCGATGGCGTCCCGGACG
GCATACCCTCCTTGGTGGCGGCGCCGAGGCTAAACCTCCCCTGACTCCCCCCTTCCCCTGCGCCCGTGTGAAAACCCTAG
CCTCGGTGGCTAAGCGGCGGCGGTGCCACAGCGTCGTCACCTTCTTGAAGGCGCCGATTTGGGCATGGGGATGCTGGGTG
TGCATGGCGAGCTTGTCTGGTTCCTGGTGGCGGCCCGTCTGATCTACCGCGTCGCAGCTCCGGGCAGTGTCTCGTGGCTG
CGGTGCTTCTTTTCCGGCCGTGTCTCCGATGGGGACCTCGCCCTTCCTCACCTTGTACATGCCGTGGTGGAGCGGTACTT
CATCTCATTCATTGATGGCAGCGAAGATCGGCGGCATGGCGTTGTGGAGGCTCGCCGCCCGATGCGCGGAGATGGACTCG
CGCAGGCGGAGGTAGCTGTCTGGCGTCATGGTGACGTCGATGGCGGAGTGGCCTACACAAGGTAGAAGACTCAATATATT
CTGAAGATGGACCTGTGAAAGATGGCTGCGACGACACAAGAGTGTGTCTGACCGGATCGTGCCTCAGACCCGGTATGTGG
CTCGGCTGGGGCTTCCGGCTTTTGATGTTAGGTTTAGGTGAGTGGTTTGGGTAGTGGCCCAACTAGCATCCCTTCATCAT
ATGGGTAAGAGTAGCGGCATATGTTGCCGAGATGGTGGATTCAGGAATATTGTCTGTAATACTTTATAAGGTCCTCGAGA
ATAATTAATAAAGTGGTCGTATGCATCTCCCAGATGCAGAGGCCGGGAGTCATCTTCATTTTCTAAAAAAAAGGAAGCAG
AGCTGTCTACTCCTGGCTGGCAAAAACGAGATCACCCTGGCTGTCACCCAAAAGCGAAGAGAAGAGAAGGGAGAAGTGAA
GAGGTCCACAGCGCGAGCGCGTGGCCATCGTGGGGAGGAACTCTCTCTCTGCAGCGCGAGTGCGAGTGAGCTAGTAGCAG
CACTTGAAATGTAGGCGAGTCAATTAGTCAAACTCCCACGACTTCAAATCCGTGTACGCGAGGGAGCGCGAGCCGGTTTA
ATT----TTAGCTGCGTGGCCAATTAGCCCGGTAAATATCCCACCACG----CCCTCATCCATC----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
CCTAATAAAGCACGATTAATTGTA----CCCCAAACTTTTGGCTTTGAAACATAAAATAAGCCAGGCCTAAACTAATCTC
CGTATTTGCGGCGTGCTCCCCCACATGCTTCTTCCCAAGTCCACCAGCGCTCCCCCACCTCCTGCTTCCCTCGCCGCCCG
TCTATATAAGCTTCCTCATTCCTCTCCCGCCCAATCCATCACACGCACCCCGCGCATACTCTTCG-----CTTCTCCTCT
CTTCTCCCCGCAGCACAGCAGCACTACCTCCGGCCGTCTC-AAGCAAACCAAACCAAAATCTCCCGAGTTGTC-------
------------------------TCGCTCGCCTGATCAATCCTTGGCGTCGCCAGCTTCATCTGGAGGCGAGGAGGCGG
ACGATTTGAACGTACC----CATGGATATGGCGCACGAGAGGGACTCGAGCAGCGAGGAGGAGGTGATGGCCGGCGACCT
CCGCCGCGGGCCGTGGACGGTGGAGGAGGACATCCTGCTCGTCAACTACATCGCCGCGCACGGCGAGGGCCGCTGGAACT
CGCTCGCCCGATCAGCAGGTAGGATAATTGCACTGCACAGTCCGATCCATGCATGCATGCTGGTCTT--TCTTTCAAGTG
CCAGCTA---CTCCGTAGTAGATTGGTTGCTTGCATCATTTTGTTTCCGCGAGA----CGTGAGGCTTAGATATTTCTAG
TAGTACGTATATCATGGA----GGGGGAAGCAACGAACCTGTCGCTCTGCATCACCATGCTAATATATGGAAACAGATAG
CTACGAACCTACTGCCTGATTTGTCTAGCAGCCGCCCAA-----------CTATAGTGAATGAGAGAGATAGAGGGAGGG
GGGAAGAAGAATTTTTAGTGGTTAGCATTATTCCCAGCCATAGGGATATTTATTTACTAATCTCTCCTCCATTACATCAC
CCGTCTCGTCACATACATGCTCGCAT--------CGCATCCGCATAAGTAATCAGCAAGTTGGCGAATCTATATTCATTA
GTAGCTAGCACTGATGTGATGTTCCATTCATTCCATTCCATGTGATTAATCTTGCCTTGCGTTTGCGTACCAGGTCTGAA
GCGCACCGGCAAGAGCTGCCGCCTCAGGTGGCTCAACTACCTCCGCCCCGACCTCCGCCGCGGCAGCATCACGCCGCAGG
AGCAGCTGCTCATCCTCGAGCTGCACTCGCGGTGGGGCAACCGCTGGTCCAAGATCGCGCAGCACCTCCCCGGCCGCACC
GACAACGAGATCAAGAACTACTGGCGCACGCGCGTGCAGAAGCACGCCAAGCAGCTCAAGTGCGACGTCAACAGCCAGCA
GTTCAAGGACGTCATGCGCTACCTCTGGATGCCCCGCCTCGTCGAGCGCATCCAGGCCGAG------------GCGGTGC
AGACAGCCGCTGACACGCCCCTGTCGTGGCAACACGGCGCGGACGACGCTCTCTACGAGTCACCAGAGCTCCCTGTCGAT
GCGTGCTGGCCAGCGGAGTACGCCGCCGTGGCCGGCGGGCAGCTGCCCAACGCCTCGGTCGCGGAGCTGTCGAGCACTAC
TACCGCCGGCTCTTCCTCGCCGTCCACCACGGACTCTGGCGCCGGCGCCCAGCCCAGCTGGCCTGCAGCGGTTGACGGTG
CCGAGTGGTTCACCACCGCCTGCGACGCCTCCAGCGCCGCCGCCACCATGTGCGACACGGACCAGCTGATCCAGCAGCAG
CAGCAGCAGGCACCGTCCCAGCTGGCGGGAGCGTGGACGTCCGAGCCGCTGCCGAGCCTTGGGTTCCCCGAGCTGGGCGT
CGCGGACTTCGAGATCGGCAGCTTGGACGTGGACAGCATCTGGAGCATGGACGACTTGTGGTACACGCAGCCGCAGTTCG
TGTGAAAAGTCAATACGGTGGCATGGAAATCCACAGCCGCGACGGTGCCCGCGGGGCGGCGTGCGGCC------TCCGG-
-----GGACGCGTAGCAGATCCAGCGGAGGAAAACGGATTAGAAG---AAGGAGAGGAACCACCTGGGACTGGGAGGATT
AAAACAAGATTAATTTACCCTGCACGTGAAGATCTCCCCGTC--TTCTGCTCCAGTTCTGTGCCGTCTTCCCTCCCGTGT
TAATTTATTATTACTACGTACAAGGGTAAAAAGGTACGTAAAAGTGTAGCAGAAGCAGATGATCTA---GTGTTAGCTGT
GCCGCCGTAAATTATGTGAGGTTCTGTTTAATCTTACTCATTCTTTC---------------------------------
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-------TGAGTGATTACTAC-----ATAGTATAAGTATAAAGGACGA------AGTATATGAAGTGAACTGTTGATAGG
AAT--------TGTA-TTTCTAGAAGTGGTAATAAAAGCAATGCTCCGACGTCAAGTCATGGTTAAATTCGTACTGCGAG
CATAGCATTCCGCCCATTTCTCGCCGCTAATTGTGATCCTCGCGCACTTGAATTCCAAGTGACGAGAAG-TTTTTTCTCC
-TTTTCTTTTTGGCTGCGGTTGTTTGCTATGATTACGATGACGGCGACCGCGCTGGGTCGATAGATTTGTTTATGCCGAC
ATGGATGTTTTA--------------------------------------------------------------------
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----TACCAGAAATTCAGTACGAGCGGTGCCGTTACATCAGCGCCAACAGTTCCCAGATGTGATCTGCATGGCCGCTGCA
TTACACGTGTTGTCCTCGTAACAAC
>chr4D_74
T-------------------------------------------------------------------------------
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-------------------------------------------------------------------AAACACGAAGTAG
AGCTGTCTACTCCTGGCTGGCAAAAACGAGATCACCCTGGCTGTCACCCAAAAGGGAAGAGAAGG------------GAA
GAGGTCCACAGCGCGAGCGCGTGGCCATCGTGGCGTA------------------GCGAGTGCGAGTGAGCTAGTAGCAG
CACTTGAAATGTAGGCGAGTCAATTAGTCAAACTCGCACGACTTCAAATCCGTGTAC----GCGAGCGCGAGCCGGTTTA
ATT----TTAGCTGCGTGGCCAATTAGCCCGGTAAATATCCCACCACG----CCCTCATCCATC----------------
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CCTAATAAAGCACGATTAATTGTAGTA-CCCTAAACTTTTGGCTTTGAAAGATAGAATAATCCAGGCCTAAACTAATCTC
CGTATTTGCGGCGTGCTCCCCCACATGCTTCTTCCCAAGTCCACCACAGCTCCCCCACCTCCCGCTTCCCTCGCCGCCCG
TCTATATAAGCTTCCTCATTCCTCTCCCGCCCAATCCATCAC----------CGCATACTCTTCT-----CTTCTCTTCT
TTTCTCTTCCCCGCACAGCAGCACTGCCTCGGTCTCGAGCAAACCAAACCAAACCAAAATCTCCTGAGTTGTCCTCTACG
CGAGCAAGTGTGCCAATCCTAGGCTCGCTCGCCTGATCAATCCTTCGCGTCGCCAGCTTCATCTCGAGGCGAGGAGGCGG
ACGATTTGAAC----C----CATGGATATGGTGCACGAGAGGGACTCGAGCAGCGAGGAGGAGGTGATGGCCGGCGACCT
CCGCCGCGGGCCGTGGACGGTGGAGGAGGACATCCTGCTCGTCAACTACATCGCCGCGCACGGCGAGGGCCGCTGGAACT
CGCTCGCCCGATCAGCAGGTAGGATAATTGCACTGCACAATCCAATCCATGCATGCATGCTAC------TCTTTCAACTG
CTAGCTAGTACTCCGTAGTAGATTGGTTGCTTGCATCATTTTGTTTCCGCCAGA----CGTGAGGCTTAGATATTTCTAG
TA-------TATCATGGA----GGGGGAAGCAACAAACCTGTCGCTCTGCATCACCATGCTAATATATGGAAACAGATAG
CTACGAACCTACTGCCTGATTTGTCTAGCAGCCGCCCAGCTAGCCGGAAGCTATAGTGAACGAGAGAGAGAGATGT---G
GGGAAGAA---TTTTTAGTGGTTAGCTTTATTCCCGGCCATAGGGATATTTA-TTACTAATCTCTCCTCCATTACATCAC
CCGTCTCGTCACATACATGCTCGCAT--CGCATCCGCATCCGCATAAGTAATCACCAAGTTGGCGAATTTATTACTCC-A
GTAGCTAGCACTGATGTGATGTTCCATTCATTCCAT-----GTGGTTAATCTTGCCTTGCCTTTGCGTACCAGGTCTGAA
GCGCACCGGCAAGAGCTGCCGCCTCAGGTGGCTCAACTACCTCCGCCCCGACCTCCGGCGCGGCAGCATCACGCCGCAGG
AGCAGCTGCTCATCCTCGAGCTGCACTCGCGGTGGGGCAACCGCTGGTCCAAGATCGCGCAGCACCTCCCCGGCCGCACC
GACAACGAGATCAAGAACTACTGGCGCACGCGCGTGCAGAAGCACGCCAAGCAGCTCAAGTGCGACGTCAACAGCCAGCA
GTTCAAGGACGTCATGCGCTACCTCTGGATGCCCCGCCTCGTCGAGCGCATCCAGGCCGCCGCCACGGCCGACGCGGTGC
AGACCGCCGCTGACACGCCCCTGTCGTGGCAGCACGGCGCCGACGACGCGCTCTACGAGTCACCGGAGCTCCCTGTCGAT
GCGTGCTGGCCAGCGGAGTACGCCGCCGTGGCCGGCGGGCAGCTGCCCGACGCCTCGGTCGCGGAGCTGTCGAGCACTAC
TACCGCCGGCTCTTCCTCGCCGTCCACCACCGACTCTGGCGCCGGCGCCCAGCCCAGCTGGCCTGCAGCGGTTGACGGTG
CCGAGTGGTTCACCACCGCCTGCGACGCCTCCAGCGCCGCCGCCACCATGTGCGACACGGACCAGCTGATCCA-------
--GCAGCAGGCACCGTCCCAGCTCGCGGGAACGTGGACGTCCGAGCCGCTGCCGAGCCTCGGGTTTCCCGAGCTGGGCGT
CGCGGACTTCGAGATAGGTAGCTTCGACGTGGACAGCATCTGGAGCATGGACGACTTGTGGTACACGCAGCCGCAGTTCG
TGTGAAAAGTCAATACGGTGGCATGGAAATCCACAGCCGCGACGGTGCCCGCGGGGCGGCGTGCGGCCTCCGGGTCCGG-
-----GGACGCGTAGCAGATCCAGCGGAGGAAAACGGATTAGAAG---AAGGAGAGGAACCACCTGGGACTGGGAGGATT
AAAACAAGATTAATTTACCCTGCACGTGAACATCTCCCGGCCTGTTCTGCTCCAGTTCTGTGCCGTCC--TCTCCTGTGT
TAAT---TTATTACTACGTACAAGGGTAAAAAGATACGTAAAAGTGTAGCAGAAGCAGATGATCTA---GTGTTAGCTGT
GCCGCCGTTAATTATGCGATGTTCCGTTTAATCTTACTCATTCTTTTTCGAAAAGTCTAAGCCCAAGTGTGGGCGCTTGC
ATCTCGCCCACACGTGTGGATCCGCGTCTGTTTGCGAGCGCACGAATCTTGACATGTTTCTAGTGCCACGTAGGACTGGG
CTGGTGTGTGGGCATTCACCCGGTCGCCCACACAGCCGTTTCACCACACAGAAGGGGCTGGTGTGTGGGCGTTCAGCAGT
TCGCCCACACGGCATTTTTCACTCACGCATAAAGGGCTGATGTGTGGGCATTTGTCATCTCGCCCACACGCCCGTCTCAT
CTCCCACACCCAAGTTGTCACTTGCCATGTGTTTTGCAGTGTACATGGCAACTGCCGTAGTGTGCTTTATAAGCAGGTGA
CAACTCTTTTTTTTTTACCCGAACATGTCAGTTGCCATGTATTTTGCAGGGTACACGGCAACTGCCCTAGCATGCTTGTA
AGCAGATGTAACTCTTTTTTTTACCCGAACATGTATGTTTTGCCATGTCTTTTTGTAGCGCTACACGGCAACTGCCTAGT
ATTAGTAGGTCGCAAACCCCTAAAGTTTTCAAATCATGGCAACTATAGTAAACCAGAGCATACATGACAACAGCCGTAGT
TGCCAAAAAATGGCATCTGGAACTTTTGACATGAGATGACAACTGCAGTTGAGCAACCATGTCAACTGTAGTTGTCCGAC
ATTACAACCGTAGTTCAACGACATGGCAACTGCAGTTAAACGAACATGGACGAGGGTCTGGACCATGGCAACTGCGGGCA
CGCGGTGACTGTCACGCGGGGCGTGCGGGACCACGAGGTACGAGGCCTGACGTACGGAGCGTGTGGGCGTTATCTATTTC
GCCCACACGCACGCGTGTGAGAGGGATCGGGAGGGAAAAAAAGAAATGTGTGGGCATTACTTGTTTTGCCCACACGTAGG
TGTGACTGTTCCTCTTATACTCCACACAAAATGTATGAGCAGACCTTCCTAACGTCCACACGTGTGGCACTTATCGGCGT
CTTTTTTTGAGTGATTACTAC-----A---TATAAGTATAAAGGACGA------AGTATATGAAGTGAACTGTTGACAGG
AATTGTAGTACTGTA-TTTCTAGAAGTGGTAATAAAAGCAATGCTCCGACGTCAAGTCATGGTTAAATTCGTACTGCGAG
CATAGCATTCCGCCCATTTGTCGCCGCTAATTGTGATCCTCGCGCACTTGAATTCCAAGTGACGAGAAG-TTTTTTCTCC
TTTTTCTTTTTCGCTGCGGTTGTTTGCTATGATTACGATGACGGCGACCGCGCTGGGTCGATAGATTTGTTTATGCCGAC
ATGGATGTTTTA--------------------------------------------------------------------
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----TACCAGAAATTCAGTACGAGCGGTGCCGTTACATCAGCGCCAACAGTTCCCAGATGTGATCTGCATGGCCGCTGCA
TTACACTTGTTGTCCTCGTAACAAC
>SNPs
----------------S-------------S---------SS-----S--S-----------------------------
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---------------------------------S----------------------------------------------
--------------------------------------------S-----------------------------------
-----------S----------------------------------------------------S---------------
---SSSS-----------------------------------------SSSS------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
---------------------S-----S----------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-----------S----------SSSSS----------
---------S----------S----------------S---S--------------------------------------
----------------------------------S------------------S--------------------------
---S------------SSSS------------------------------------------------------------
---------------------------------------------------------S----------------------
-------------------------S------------------------------------S-SS-SS-----------
------------------------------------------------------SSSS----------------------
------------------SSSS----------------------------------------------------------
-----------------------------S-SSSS-S---------------------------------S-------S-
--------------------------------------------------------------------------------
----------------------SSSSSS------------------------------------------------S---
-----S-S------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S----------------------------------------------------------------------------S
------------S-------------------------------------------------------------------
---------------------------------------------------------------------S--S-------
-------------------------------------------------S------------------------------
----------------------S------S--------------------------------------------------
---------------S--------------S------------------------------S------------------
-------------S------------------S----S------------------S----------------------S
SSSSS-------------------------S--------------SSS--------------------------------
---------S--------------------------------------------------S--------S----------
------------------------------S-----------------------------------SSS-----------
-----------------S--------------------------------------------------------------
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-------S-------------SSSSS-------------------S--SSSSSS--------------------------
--S------------S----------------------------------------------------------------
-------------------------------------------------------------------S-S----------
--------------------------------------------------------------------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS--------------------------S-------------------------------------------------
--------------------S----
>forward_1554
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--------------GGCTGGCAAAAACGAGATCG----------------------------------------------
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>reverse_2821
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--------------------GAGGGGGAAGCAACAAACCT----------------------------------------
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>forward_2666
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------CCCGATCAGCAGGTAGGATC------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3951
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------AGACAGCATCTGGAGCATGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_2912
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGCCTGATTTGTCTAGCCGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_5761
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CAACAAGACCAACTGCGGTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
