>input_sequence_51084
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----------------------------------------ATGGCGTTGCCTGCTCGGCGGGCTGCTGCAGGCTGCGGCT
TGCCCATCCGGGTGGTGAGTCGGCGCCTGGTCAGGGCCTCCGACCCCTCCATCCGGCCACACGTGCTCGCCGTCTCCCAC
CTCGATCTCTACGCCAACACCGAACAGTGCGCCCTGACATGCGTCTACCCCAAGCCCCCCACCGGCGCCGGCGACTTCGA
CGCCGTTGTCGCCGCCTTCGAGGCCCACATGCCGGCATACCTCAACTACTTCTTCCCTATGGCTGGCCGCATCGTGGTCG
ACCCCAGCTCTGGCATCCCCGAGCTCCACTGCTACAATCAAGGAGCGGAGCTCATCGTGGCACATGCCGGCGTGGAGCTG
TCGGCCCTGGACTGGAGCCTATCGGGGGAGTCCCTGAAGAGGATCCACGTGCCGTACGCCCAGGACATGGTCCTGTCGGT
GCAGCTGCTGTCCTTCGCCTGCGGCGGCTTCGCCGTGGTCTGGGCCGCCAATAACCTGGTCGGCGACGGGAACGTCGGCG
TCATGCTCGTGAGGATGTGGACCGAGCTGGTCCGGACCGGGACTATCTCC------------GGCGGAGGCCCCAACCAT
GACCGCTCGGTGCTCAGGCAGTTCAGCCGCCCCCGCGACCCGCCGACGTACGGCGCCTCGGTTGCAGCCATGTACACGCG
GTGGGAGCACGAGCAGGAGGTGAACGCGCTGACAGCCGAGGAGAGCTTCATCGAGCGCCTCTACTACGTCGACGAGCGCG
ACATCGCCCGGCTGCGTGGGGAGGCGAGCGCCGAGGGCCGCCAGCGTGCGACGCGCGTGCAGGCCGTGTCCGCGTACCTG
TGGAAGGTCCTCGCGGGGATCGTGGCCACGTCGAAGCTGCTGGGCGAGGACGAGAAGCGCTGCCGCCTGCTGTGGTGGGT
GGACGGGCGGCGGCGGTTCTCGTCGCCCGAGCTCCGGTCCTCGCTGCGCAACTACGCCGGCAACGTCACGTCCTACGTGG
TGGCGGCTGCGGCCGCGGCCACGGTGTTGAGCAAGCCTCTGGCGGGCGTGGCGGCCATGGTGCGTGAGGCCGTCACGCTC
ACGCCGGCGGACTACGACGAGCTGTACCAGCAGATGGTGGATTGGATGGAGGTGCACAAGCCCACGAACTTCGTCGAGAC
GCCCGCCATCGGGCTCGGCAGCCCCACGCTGGCCCAGACCATGTGGTCCTCCTTCCCGAACGACACTGACTTCGGTTTCG
GCGAGGCCGCCTTGGCCATGCCGGTGCACCAGAACCTCGGCAGGCTGTGCATGGGCCTGATCTGCATCACCCCCAAGCCA
GCAGATCCCGGGACGTGGATCGTCAGCGCCTTCATATGGCCGCGTCTCGCGGCGGTGCTCGAGTCAGACGAGCAGCGCAT
CTTCAAGCCTCTCACAGCAGAGTTCCTTGGTCTCACCCGTGGACATGGGCTCAGACCTCGTCTTTGA-------------
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>chr4D_1_TraesCS4D01G307100
TCGACGGCTGCATGGCTGGCTGCGTCGAGGAGCTAGTAGGGTGGTTCTATTCCTTGGCGCAGTTGGTGTGGCGGCGGTAG
CTGCGTTTGGGCTTTTGGTCCTCCCGCTCCTGCCCCGCTTTGAGGGCATTGGCTCCGGCGCTTTCGAGGAGCAGTAGAGG
TCTGTGTATAGGAGCTTGGTGGCCGGTGCGGTGGCATCGGCGTTCTGGGGGTGGTAGCGGCTTCCAATGCAGGGCTTGTG
GTTGATGGTGGCTGGTTCTAGACTTCTAGCGCTCATCCCTGATGGCGTCGGATGGAGGTGGTGGTTTTGGGATTTTCAGA
GGCGCGGGGAAGATCCCCAGCCGACGTGCATTCGCGGCGGGGAAGTTCACCGGCTCGTAAAGCTTAAGCGTGATGGCGCT
TCTGGGGGTCGCTGTTTCGTTCTTCGGCGATTGCTTCGGCGGCGGCGGAGTTCGGCGACATACGATTGCGAGTTCAGTGT
GCAGGCTTCCGAGGACCTGGTTGTAATTTGTTTTCTTTCTAGGGTCATGTGTGCTGTTGTGTCGGGACATCTTCTAGGTA
GATCCTGCGTGAGTGTGCTTTGTACCTGTCTTTGATATGAACAATCAGAAACCTCACTCTCTCAAAAAAAAAAACGTGCG
AGGGGCAACAGCCCCAAAGGATAATGACCACGTGCCCTAAAATCACACGGGAGTGGGACACATTCAAGGCAATGTGTCAC
AAAAACTAGACACACACCGAGGCCGGAGAGTGCCGTCGAGATCGTCGTCCGTCATCGCCAGAACGGAGCAACACCTGCCG
CACCGAGTGCGTACGTACGCGATCTTGAAATATCGAACTGAAGGAAGATCACACAACACGTATCGTGTCGTGCCCGTTTC
CAGCACACATATATACTCACCCATGCACGCTTTCTCCATCAGCTGAAGCCAGATACGTAGTACTACAGGGCAGGAGTGAG
CAGCAGTCGCTAGCTACCTCGCGAATCAAGGAGGTAATCAATGGCGTTGCCTGCTCGGCGGGCTGCTGCAGGCTGCGGCT
TGCCCATCCGGGTGGTGAGTCGGCGCCTGGTCAGGGCCTCCGACCCCTCCATCCGGCCACACGTGCTCGCCGTCTCCCAC
CTCGATCTCTACGCCAACACCGAACAGTGCGCCCTGACATGCGTCTACCCCAAGCCCCCCACCGGCGCCGGCGACTTCGA
CGCCGTTGTCGCCGCCTTCGAGGCCCACATGCCGGCATACCTCAACTACTTCTTCCCTATGGCTGGCCGCATCGTGGTCG
ACCCCAGCTCTGGCATCCCCGAGCTCCACTGCTACAATCAAGGAGCGGAGCTCATCGTGGCACATGCCGGCGTGGAGCTG
TCGGCCCTGGACTGGAGCCTATCGGGGGAGTCCCTGAAGAGGATCCACGTGCCGTACGCCCAGGACATGGTCCTGTCGGT
GCAGCTGCTGTCCTTCGCCTGCGGCGGCTTCGCCGTGGTCTGGGCCGCCAATAACCTGGTCGGCGACGGGAACGTCGGCG
TCATGCTCGTGAGGATGTGGACCGAGCTGGTCCGGACCGGGACTATCTCC------------GGCGGAGGCCCCAACCAT
GACCGCTCGGTGCTCAGGCAGTTCAGCCGCCCCCGCGACCCGCCGACGTACGGCGCCTCGGTTGCAGCCATGTACACGCG
GTGGGAGCACGAGCAGGAGGTGAACGCGCTGACAGCCGAGGAGAGCTTCATCGAGCGCCTCTACTACGTCGACGAGCGCG
ACATCGCCCGGCTGCGTGGGGAGGCGAGCGCCGAGGGCCGCCAGCGTGCGACGCGCGTGCAGGCCGTGTCCGCGTACCTG
TGGAAGGTCCTCGCGGGGATCGTGGCCACGTCGAAGCTGCTGGGCGAGGACGAGAAGCGCTGCCGCCTGCTGTGGTGGGT
GGACGGGCGGCGGCGGTTCTCGTCGCCCGAGCTCCGGTCCTCGCTGCGCAACTACGCCGGCAACGTCACGTCCTACGTGG
TGGCGGCTGCGGCCGCGGCCACGGTGTTGAGCAAGCCTCTGGCGGGCGTGGCGGCCATGGTGCGTGAGGCCGTCACGCTC
ACGCCGGCGGACTACGACGAGCTGTACCAGCAGATGGTGGATTGGATGGAGGTGCACAAGCCCACGAACTTCGTCGAGAC
GCCCGCCATCGGGCTCGGCAGCCCCACGCTGGCCCAGACCATGTGGTCCTCCTTCCCGAACGACACTGACTTCGGTTTCG
GCGAGGCCGCCTTGGCCATGCCGGTGCACCAGAACCTCGGCAGGCTGTGCATGGGCCTGATCTGCATCACCCCCAAGCCA
GCAGATCCCGGGACGTGGATCGTCAGCGCCTTCATATGGCCGCGTCTCGCGGCGGTGCTCGAGTCAGACGAGCAGCGCAT
CTTCAAGCCTCTCACAGCAGAGTTCCTTGGTCTCACCCGTGGACATGGGCTCAGACCTCGTCTTTGAGTTCTCGTACTAC
CTACTTTCCAGCATTACAAGACCCACACGCATTTTGGAATTATTTTGACATATAAATAGGATTAATAATACCATTTGTTT
TTATAACACGGTACAGATGCAAGCGCTCATATATACACGCATACACTTATCTCTATAAACACACGCACACCCTACCTCTA
TGAGCACGTTCGAGAGACTAAGCCGGCAATGTCATTTTGAGGTTGGCAAAGTCACCAAATGTGCCTCGTAATCAACGGGA
ACATCTCTTTCCACTGAACGAGCACACAGAAAATTCTAGAATAAATGCGAGCACCAGGACTTAAACCCGGAGGGCTGGGG
ATACCACTTTCCTCCTAACCATCCAACCACAAGTTGGTTCGCAATAAAACCATTTGTTGTTATAATTTCATCGACGTATC
TTTTCTATTTGGCTGCATGAAAGGAGAAATATGTGAATGTACATTTTTTTTCCAACCAGGCACACCCCTCTTTCATTAAT
TGCCTAGGGAAAATACACAATATTCAATCATTACAAGCCAGGGAAGGGAAAGAGAGACAAGTTGGGGCATTATCAGGAAA
TCCGCCACAAGTGCTCGATATCGACACACCTTTTATGTTACGGGACGAAAACCCGATAACACCGGACATGACCGTAACAA
ATCCGACAACCAGAGTACATAAAACCACACAACAAAACAAGAGGCTACCACCACAAACAACATACCACATCAACTAGACT
TCAAGAGAGTAATTCGCTGGACAAGGCACCATGATGAAAACGGACAATCAATCATCAGCCATATGACATGTGCCAAATTC
CGCAACAGCGGCGCCATATGACGAGCCAACAAAGAAGTTTCATTCATCAGAGCACGGACACCACCCTGAAACACCTCCTT
GGCAGTGCCTTTGAGAAGACCGGCCCAATAAAGCATGAACGAACGAATTGTGAAAACTGCTTTAATAGGGGATCGTACAA
TATAGCCCTCCAAGGTAACTTTGTTCC
>chr1D_1045
CATTCGT-------------------------------------------------------------------------
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-----------GTGGTGAGTCGCCGGCTGGTGAAGGCATCCGACCCCTCCATCCAACCGCAGGTGGTGCCCCTCTCCAAC
CTCGACCTGTACGTCGGCAACGTACAAGTCGCCATACTATGCCTCTATCCCAAGCCTCCGGCGGGCAGGGAT---TTCGC
CGGCGTGGTGGCCACCTTCGAGTCCTTGCTGCCGGCTTTACTCAACGAGTTCTACCCTTTCGCCGGCCGCATCGGCACCA
ACCCAAGCTCAGGCCTCCCCGAGCTGCTCTGCCAGAACCAGGGCGCAGAGCTGGTCGTGGGAGAGGTCCGCGTCGCTCTG
GGGAGCCTGGACTACGGCCTGGCGGACAAGTCCCTGAAGAAGCTGATGCTCCCGTACGCGGAGGACGTCACCTTCTCGGT
GCAGCTGCTATCCTTCGCCTGCGGCAGCTTCTCCGTGCTGTGGGCAACCAACCACCTCGTCGGCGACGGCCATGACAACA
TCAGGTTCCTGCGGATGTGGTCTGAGCTCGCACGAACGGGCAAAATCGTCGCCGACGGCGGGGACGGAAAGCTAAGCCAC
GACCGCTCGGTGTT------------CCGCCCTCGCAACCCGCCGTCATACAGAGCCTCGCTCGCCACCGACCTAACGAC
GTTCGACCCGCGCCGGCTGGTAAACGTCCTGACGGCCCACGACAGCTTCGTCGACCGCCTCTACTACATCGACGCGGCCG
ACATCGCCAGGCTGCGCGAGATGGCGAGCACCAAGCTGCAGCGCTCGTCA---CGCGTCCAGGCCGTGTCCGCGTACCTG
TGGAAGGTCCTCGCCGGCGTGGTTGCCGCTTCCC---------GCGTGCCCGAGGAGCGCTGCCGCATGGGGTGGTGGGT
GAGCGCGCGCCGTCGTCTCACGTCGCCTGACCTCGCCTCTGCGATGCGCAACTACTTCGGCAACGTCACGACCTATGCCT
ACGGGGACGCGACGCTGGAGGAGATCCAGCGCAAGTCGCTCGCGGAGGTGGCGGCCATGGCGCGGGAGCCGGTCGCCTCC
GTCA------ACTACGACGAGTACATCCAGGATCTGGTGGACTTCGTGGAGGTGCACAAGGGACAAGGGCTGATGGAGAC
GGCCGTCGTCGGGCTGGGCAGCCCGACCCTAAGCCAGTCCGTGTTCGACTCATTCCCACTCGACACCGACTTCGGCTTCG
GCCAAGCTGCTCTCGCCATGCCCATCTCCG---ACTTCGCCAACCTCTGCTCAGCCTACCTGTCCATCAGCGCGCGGCCG
GCAGGCGACGGCTCCTGGCTCGTCAGTGCCTACATATGGCCGCGTCTCGCCGCCGCCCTCGAGGCCGATGAGCAGCACAT
CTTCAAGCCTCTCACGGCGGACTACCTTGGCCTCAC--------------------------------------------
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>SNPs
SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS-----------S--S-----S-S---S----------------SS--S--S---S-SS--S-----S--
-----S--S----S-SS--S--S---SSS----S-SSS----S----S--------S--SS-S---SSS-SSSSS----S
--S---S--S---S--------S--SSSS-------S-SS------S-S----S----S-S--S----------SSSS-S
----S-----S---S----------S-S----S-S--S--S--S--S-----SS------S-S-S-S-S----S-SS---
SS-SS--------SSS----SS---SSS------------S-S-SSSSS-S--------SS-----S-SSS-S-S-----
---------S---------------S-----S-----S-S-----SS----SS----S-----------SS-S-S-SS-S
---S-S--S--S--------S-S-----S-SS--S--S--S-SS---SS--------------S----SSS-SS-S---S
------------S-SSSSSSSSSSSS------S---S--------S-S---S-S------S-S--SS--SSSSSS---SS
--SS--S-SSSSS-S-SS---S----SS-----S---S-S--S------S----S------------S------S-SS--
--------S-------S-S-SS-------S--S--SSS-SS-SSSSSS-SSSS-----S---------------------
--------------S--SS-S--S---S-S--SSSSSSSSSSS---S-SS----S-----------S--SS---------
-SS--S---S--S--SS--S-------S--S---SSS--SS--S-----------SS-------------S----S-SSS
SS-S--SS---S-SSS--SSSS-S-SSS-S-----S-S--S----SS-------------S---S---S-S---S-SSS-
SSSSSSSSSS-----------SSSSS----S-SS-------S-SSS--------------SSSSSSSSSS-SS-S-----
-S---S-S-------S--------S--S--SSS----S--S---SSSS---S-----SSS------S--------S----
--S-S--S--SS-S--------SS-SSS-SSSS--S---S--SS--S---SSS-S-SSSS-S-S-----S-S-SSS---S
----SSSS---SS-S---S-------S----S------------------S--S-SS------S-S--S-------S---
---------------S--S--S-S------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_466
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----------------------------------------------GGAGTTCGGCGACATACGAT--------------
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>reverse_2088
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-------CGGACTACGACGAGCTGTAC-----------------------------------------------------
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>forward_913
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-------------TACTCACCCATGCACGCTTT-----------------------------------------------
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>reverse_2770
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-------------------------------------------------AGCACCAGGACTTAAACCCG-----------
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