>input_sequence_51024
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------------ATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTGAGGAGGGGCCTGTGGTCGCCGGAGGAAGACGA
GAAGCTCGTCAAGTACATCACCGCGCATGGCCATGGCTGCTGGAGCTCAGTCCCAAGACAAGCTGGTAGGTGCGGGGGCC
TGCGGATTCGACCTCTGCTGCTTCAGTTCCACCAGCTAGCTGGCTGT-GTTCTTGACCACTCACTTTCTGCATTGCTGAA
TATGTATGTGTTCATCTTCATTCATGCGCGCAGGGCTGCAGAGGTGTGGCAAGAGCTGCAGGCTGAGGTGGATCAACTAC
CTGAGGCCGGACCTCAAGAGGGGGAGCTTCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAA
CAGGTAAACA-TCCTC--CTGCTCCAGCTTGAATGCATGCATGGTGCTT-GCCCCTACCCTACATGCAAATCACCTCTGC
ATAGCTGCTGTAACTTCATTCCCCTGCAC-----ACATGACAGTCACTTATCTGTGCGTCTGCATGGCCTACACGCAAAG
CGAGTAGTTTGAAATCACATTAGCTAGCTTGCTCGAGAAAAGGAATGAAAGGGACACAAATGGCAGCAGATTGAGCTAAT
GCCAAAATGTGTGCTGTGCGCTGTGCTTTGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGA
CAATGAGGTGAAGAACTTCTGGAACTCCACCATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTACGGTA
ACATCCCTTCCTCTGCAGGTAACTGGTAGTAGATCATGTACTAGTAACTACTCC--AGTACGTACGAAATTGCTTGCAGA
GCTACTAGTTAATTTTCTCTTCCAAAAGAACCGTCTAATCTGACACCAAACATGTA--TAGTGGTACACCAGTACTTACC
GTACGCACTAACTCGGAGTTACAATGTCGTTTTTGGTACAGATTTGTACTACAACATTCTGGATGGGGCGGGGCAAGGCA
TCGCAGCTGCGGGGTGCGCGTCGCTCAACGCGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGTCCCCTCCATCCTCC
GCGGCATGGCTCAATTTCACCTCCCAGCCGCTGCTCCTCCCCGTCCACGGCGCCGTCCCCGGCTGCGACCTCCAGTACAC
CGTCGACGGGGAGTTCATCAGGCTGTGCCACGCGGCGGCCAATGCTTGCCCGGAGAACGGCGCCTCTAGCCTCTTGGCTC
AAGAAGGCGGGGCTGATCGGAGCTGCCTCCCGGTGTTCGCCGAGCCAAAGGGCGCCGGCGCTTTCGCCGCCGATCCGGGC
ATGGGTCCGGTGGCGGACTTCATGGACGCCATCCTCGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAG
CTTCTCTGCGAACACCGGCATGCAGCTCCACTGGGTTCCCTGA-------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>chr3A_1_TraesCS3A01G251200
ACAAAGCTTTGTTGGACGCTGATAAATACGGAAAGGCCACCCACTCTGCTTAAATTACATCTGCAATCTTTTCAGGGAAG
GGAGGCTGCCCAATAATGTGCATGTCCTCGAGCCTGAGCTTCCTTCTTGCAGCCCTTTGCTCCTCGTCTT----TCTCTT
TGGCAATTGGCAGGGCACACACAGGGCGATCCCAAATCTCGACCTTT--CTGCCAAAGCAGAATGAATGAATGCACGCGG
ACACATTGCTTTCTGTATATATACAAAGTCGCAAAAAAAGTGATG----------------------CAGTCGCAGAGGT
AAATTGGTTTCCCGAAGGGTGCATGTGGGCATGTAAGAACGGCATGCCAAAGAAGTAAAGAGCAGGGAAAGACCATTTAA
GGCTAGGGCAGCACACATATATAGATGAAGGGTCAGAAGGCGCAAATGGGCCGCCATTACATATCTTCTTGACGAATTGA
TACTAGTCCAAATGGTAGCTGCTGCA-----TGCATGCCATGTACCGCAGGCAGT-------------------------
--------GGCAGTGAAATTTCCGCTCATGCAAACTGGACTAATCAACAC-----ACTGCACACTCACAGGCATGGATCG
GAGG--------CGCACAGTACAAGAGTTCCCAAAACCAGCCAGGCATAGGGGCACAGCCCCATCACACAAGTCTTCTCT
CATAACGCAGGGGGTGGAGCGTGGAAGGACCAAAACGCCCCTCGCCCGGTGGTCTAGTCCAGTCACGCCTCATCGCCTTA
GGCCCTCGCTCGAGCCACTCACTTTTGAAGTAACCTATGTAACATGCTGCTCACGAGTAGGTTGGACGGGGGCCCGTGCT
AGAT-------------------------AGGGCTCGACAGGTTTAGGCCCAACTTTTCCTCCCCGTGCTTTTCATCTGC
CTGCCCTTAGATGTGGCCATTGCATTGCATTGCATGCATGCACACTCGCCACATTGCCCTCTCTCA---TCTCATCTCAT
CTTCTTTATAACCAGT-------------------------GCAGCCTGCGGTGAGTGTGAACTGTGTAGTAGTTGAGTG
AGGAGAGAGGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTGAGGAGGGGCCTGTGGTCGCCGGAGGAAGACGA
GAAGCTCGTCAAGTACATCACCGCGCATGGCCATGGCTGCTGGAGCTCAGTCCCAAGACAAGCTGGTAGGTGCGGGGGCC
TGCGGATTCGACCTCTGCTGCTTCAGTTCCACCAGCTAGCTGGCTGT-GTTCTTGACCACTCACTTTCTGCATTGCTGAA
TATGTATGTGTTCATCTTCATTCATGCGCGCAGGGCTGCAGAGGTGTGGCAAGAGCTGCAGGCTGAGGTGGATCAACTAC
CTGAGGCCGGACCTCAAGAGGGGGAGCTTCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAA
CAGGTAAACA-TCCTC--CTGCTCCAGCTTGAATGCATGCATGGTGCTT-GCCCCTACCCTACATGCAAATCACCTCTGC
ATAGCTGCTGTAACTTCATTCCCCTGCAC-----ACATGACAGTCACTTATCTGTGCGTCTGCATGGCCTACACGCAAAG
CGAGTAGTTTGAAATCACATTAGCTAGCTTGCTCGAGAAAAGGAATGAAAGGGACACAAATGGCAGCAGATTGAGCTAAT
GCCAAAATGTGTGCTGTGCGCTGTGCTTTGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGA
CAATGAGGTGAAGAACTTCTGGAACTCCACCATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTACGGTA
ACATCCCTTCCTCTGCAGGTAACTGGTAGTAGATCATGTACTAGTAACTACTCC--AGTACGTACGAAATTGCTTGCAGA
GCTACTAGTTAATTTTCTCTTCCAAAAGAACCGTCTAATCTGACACCAAACATGTA--TAGTGGTACACCAGTACTTACC
GTACGCACTAACTCGGAGTTACAATGTCGTTTTTGGTACAGATTTGTACTACAACATTCTGGATGGGGCGGGGCAAGGCA
TCGCAGCTGCGGGGTGCGCGTCGCTCAACGCGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGTCCCCTCCATCCTCC
GCGGCATGGCTCAATTTCACCTCCCAGCCGCTGCTCCTCCCCGTCCACGGCGCCGTCCCCGGCTGCGACCTCCAGTACAC
CGTCGACGGGGAGTTCATCAGGCTGTGCCACGCGGCGGCCAATGCTTGCCCGGAGAACGGCGCCTCTAGCCTCTTGGCTC
AAGAAGGCGGGGCTGATCGGAGCTGCCTCCCGGTGTTCGCCGAGCCAAAGGGCGCCGGCGCTTTCGCCGCCGATCCGGGC
ATGGGTCCGGTGGCGGACTTCATGGACGCCATCCTCGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAG
CTTCTCTGCGAACACCGGCATGCAGCTCCACTGGGTTCCCTGAGTTACTGGTTGGGGGTATTTGGGTAGGTGTATGTATG
GCTTGATCTAGTAGTTGGCTTCCTGAAAT----TATATACTCCTAGCTGATGATGGAATAATTACCTCATGTACGTTTCC
TAGGGTATACTACTGTGCTAGTATTTACATGTGTTACGTGTAAATATATATTGTAGGAA----TTATATATGTCATTATA
AGTATATATATCATGCTTGTCCGTGTGCCAAAGAGGAAACTTCTGATTAGCTACACCACATATAGTTTTGTATGCTACGA
TGTGTACAGCCGGAGGCACGTACCCGCTATGCATGCATAGAGACATGCATGACGGTGGGAATATGTAGTGTATGCATGAG
C--TAGCTGCGCAAATTATACACACTCCTATCGTCAAGCATTATCATCTTCCTTCCTATCTTATGAGAGGATGTTTCTGA
AGATTCACTCGTGCAGTAACCGGTGCTAAACATACTGAAATTGTTAAATCTGTCAGGTGTAAGCAGTATCATAACAAATA
AACAGTGTC--------AACTGCAAAACATCTCCCACCCTCATCAGCTGTGAAAGTAAAAATAAAGGTGTTTGGAGCCCA
CGGGTTTCACTGAAATGAAACCTCTGTTGGTAGGCGAAGGTCGATCG--GCAGGCGTCTTGTTTCCAGAAGAACTGAGTT
AATTCCTTGTCTGCAGAAACTGACCAGAACGGCAAAACCGCAACCGTTCAGCTGCCGATCCCACGGCACGGGCGTAGGTA
AAAGACGGGACTGCGCTACAGTCCTGCAAATGTCCCTGCCGCGGATCGAGCGGCCCGCAGGCTCGCGCGCTCCGGGGGGC
TGCTGGTCGGTCACGGGGCCGTTGCACCAAAGGCACAACCGCACAAGGCGTCATCATGACTTTGATAAAGAGAGGGGCAT
GGCATGGCACTCGGACGCGCAAATTTCCCATTCCATTTGCGGCTGAACAGGCCATAGATTCTACACTGCACAACAGCAAC
GTATCATGGTGTCACGAAACCTC
>chr3B_1
ACAAAGCTTTGTTGAACGTTGATAAATACGGAAAGGCCACCCACTCTGCTTAAATTACATCTGCAATCTTTTCAGGGAAG
GGAGGCTGCCCAATAATGTGCATGTCCTCGAGCATGAG----CTTCTTGCAGCCCTTTGCTCCTCGTCTTAATTTCTCTT
TGGCAATTGGCAGGGCGCACACAGAGTGATCCCAAATCTCGACCTTTTTTTGCCAAAGGTGAATGAATGAATGCACGCGG
ACGCGTTGCTTTCTGTATATGTACAAAGT------------GATG----------------------CAGTCGCAGAGGT
AAATTCGTTTCCTCAAGGGTGCATAT-GGAACGTAAGAACAAGACGCTAAAGAAGTAAAGAACGCAGAAAGACTATTTAA
GGATAGGGCAGCACACATATATAGATGAAGGGTCAGAACGCGCAAATGGGCC---ATTACATATCTTCTTGACGAATTGA
TACTAGTCCAAATGGTAGCTGCTGCTG------CAGACCATGTACTCTGAAGAAAGCG----GGGCAGTTATGGGCGTAC
C----GCAGGCAGTGAAATTTCTGCTTATGCAAATTGATC-ACACACCAC-----TGTACACATTCACAGGCAGGCAT--
--------------CACAGTACAAGAGTTCCCAAAACCAGCCAGGCATAGGGGCACAGCCCCATCACACAAGTCTTCTCT
CATAACGCAGGGGGCGGAGCGTGGAAATACCGAAACGCCCCTCGCCCGGTAGTCTAGTCCAGTCACGCCTCATCGCCTTA
GGTCCTCACTCGAGCCACTCACTTTTGAAGTAACCTATGTAACATGCTGCTCACGAGTAGGTTGGACGGGGGCCCGTGCT
AGATGGATACGAGTAGAT-AGGAAGGAGTAGGGCTCGACAGGTTTAGGTACAACTTTTCCTCCCCGTGCTTTTCATCTGC
CTGCCCTTAGATGTAGCGATTGCATTGCATGCATCGCATGCACACTCGCCACATTGCCCTCTCTCTCTCTCTCATCTCAT
CTTCTTTATAACCGGT-------------------------GCAGCCTGCAGTGAGTGTGA--------GTAGTTGAGT-
----GAGAGGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTCAGGAGGGGCCTGTGGTCGCCAGAGGAAGACGA
GAAGCTCGTCAAGTACATCACGGCGCATGGCCATGGCTGCTGGAGCTCAGTCCCAAGGCAAGCTGGTACGTGCGT--GCG
TGCGGATT----CTCTGCTGCTTCAATTCCACCAGCTAGCTAGCTGTTGTTCTTGACCACTCACTTTCTGCATTGCTGAA
TATGTATGTGTCCATCTTCATTCATGCGCACAGGGCTGCAGAGGTGCGGCAAGA-------GCTGAGATGGATCAACTAC
CTGAGGCCGGACCTCAAGAGGGGAAGCTTCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAA
CAGGTAAACCTTCCTG--CTGCTCCAGCTTGAATGCATGCATGGTGCTTTGCCCCTACCCTACATGCAAATCAGCTCCGC
ATAGCTGCTGTAACTTCATTCCCCTGTGCTGTGTACATGACAGTTACTTATCTGTGCGTCTGCATGGCCTACACGCGACG
CGCGTAGTGCAAAATCACATT----AGCTTGCTCGTGACAAGGAATGAAAGGGACACAAATGGCAACAGATTGAGCTAAT
ACCAAAATGCGTGCTGTGCGCTGTGCTTTGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGA
CAATGAGGTGAAGAACTTCTGGAACTCCACCATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTCCGGTA
ACATCCCTTCCTCTGCAGGTAACTGGTAGTAGATCATGTACTCGTAACTACGGAGTAGTACGTACGAAA----TTGCAGA
GCTACTAGTTAATTTTCTCTTCCAAAAGAACCATCTAATCTGATACCAAACAT----GTAGTGGTACACCAGTACTTACC
GTACGTACTAACTCGGAGTTACTATGTCGTTTTTGGTACAGATTTGTACTATAACATTCTGGATGGGGCGGGACAAGGCA
TCGCAGCTGCGGGGTGCGCGTCGCTCAACGGGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGCCCCCTCCGTCCTCC
GCGGCATGGCTCAATTTCACCTCCCAGCCGCTGCTCCTCCCCGTCCACG------TCCCCGGCTGCGACCTCCAGTACAC
CGTCGACGGGGAGTTCATCAGGCTGTGCCGCGAGGCGGCTAATGCTTGCCCGGAGAACGGTGCCTCTAGCCTCTTGGCTC
AAGAAGGCGCGGCTGATCGGAGCTGCCTCCCGGTGTTCGCCGAGCCAAAGGGCGCCAGCGCTTTCGCCACCGATCCGGGC
ATGGGTCCGGTGGCGGACTTCATGGACGCCATCCTCGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAG
CTTCTCCGCGAACACCGGAATGCAGCTCCACTGGGTTCCCTGAGTTACTGGTTGGGGGTATTTGGGTAGGTGTATGTATG
GCCTGATCTAGTAGTTGGCTTCCT-AAAT----TATATACTCCTAGCTGATGATGGAATAATTACCGCATGTACGTTTCC
TAGGGTATACTGCTGTGCTAGTATTTACATGAGTTACGTGTAAATATATATTGTAGGAAGGAATTATATTTGTTATTATA
AGTATATATATCATGCTTGTCCGTGTGCCGAAGAAGAAACTTCTGATTAGCTATACCACATATAGTTTTGTATGCTTCGA
TGTGTACAGCCGGAGGCACGTACCCGATATGCATGCATAGAGACATGCATGACGGTGGGAATATATAGTGTATGCACGAG
CTATAGCTGCGCAAATTATACATACTCCTATCGTCAAGCATTATCATCTTCCTTCCTATCTTATGAGAGGATGTTTTTGA
AGACTCACTCGTGCAGTAACCGGTGCTAAACATACTGAAATTGTTATATCTGTCAGGTGTAAGCAGC---ATAACAAATA
AACAGTGTCAAGTGTCAA-CTGCAAAACATCTCCCGCCCTCATCAGCTTTGAAAGTAAAAATAAAGGTGTTTGGAGCCCA
CGGGTTTCACTGAAATGAAACCTCTGTTGGTAGGCCAAGGTTGATCG--GCAGGCGTCTTGTTTCCCAAAGAACTGAGTT
AATTCGCTGTCTGCAGAAACTGACCAGAACGGCAAAACCGCAGCCGTTCAACTGCCAATCACACGGCACGGGCGTAGGTA
AAAGACGGGACTGCGCTACAGTCCTGCAAATGTCCCTGCTGCGGATCGAGCGGCCTGCAGGCTCGCGCGCTCCGGAGAGC
TGCTGGTCGGTCACGGGGCCGTTGCACGAAAGGCACAACCGCACAAGGCGTCATCATGACTTTGATAAAGAGAGGGGCAT
GGCCAC----CCGGACGCGCAAATTCCCCATTCCATTTGCGGCTGAACAGGCGATAGATTCTACACTGCACAACAGCAAC
GTATCACGGTGTCACGAAACATC
>chr3D_1
ACAAAGCTTTGTTGAACGTTGATAAATACGGAAAGGCCACCCACTCTGCTTAAATTACATCTGCAATCTTTTCAGGGAAG
GGAGGCTGCCCAATAATGTGCATGTCCTCGAGCCTGAG----CTTCTTGCAGCCCTTTGCTCCTCGTCT------CTCTT
TGGAAATTGGCAGGGCGCACACAGGGCGATCCCAAATCTCGACC--TTTCTACCAAAGCTGAACGAATGAATGCACGCGG
ACACATTGCTTTCTGTATATATACAAAGT------------GACACAGTCGCAAAAAAAAAGTGATACAGTCCCAGAGGT
AAATTAGTTTCCCGAAGGGTGCATGT-GGCACGTAAGAACAACGCGCTAAAGAAGTAAAGAGCACAGAAAGACTATTTAA
GGATAGGGCAGCACACATATATAGATGAAGGGTCAGAACGCGCAAATGGACC---ATTACATATCTTCTTGACGAATTGA
TACTAGTCCAAATGGTAGCTGCTGCTGCTGCTGCAGGCCATGTACTCTGAAGAAAGCGGGGCGGGCAGTTATGGGCGTAC
TGCATGCAGGCAGTGAATTTTCTGCTTATGCAAATTGATT-ACACACTACTGTAATGTACACATTCACAGCCAGGCATCG
ATGGATCGGAGACGCACAGTACAAGAGTTCCCAAAACCAGCCAGGCATAGGGGCACAGCCCCATCACACAAGTCTTCTCT
CATAACGCAGGGGGTGGAGCGTGGAAGTACCGAAACGCCCCTCGCCCGGTAGTCTAGTCCAGTCACGCCTCATCGCCTTA
GGCCCTCACTCGAGCCACTCACTTTTGAAGTAACCTATGTAACATGCTGCTCACGAGTAGGTTCGACGGGGGCCCGTGCT
AGATGGATACTAGATAGGAAGGAAGGAGTAGGGCTCGACAGGTTTAGGTCCAACTTTTCCTCCCCGTGCTTTTCATCTGC
CTGCCCTTAGATGTATCCATTGCATTGCATTGCATGCATGCACACTCGCCACATTGCCCTCTCTCA---TCTCATCCCAT
CTTCTTTATAACCATGTACTCCTACCAGTGCAGCAGCTCAAGCAGCCTGCCGTCAGTGTGAA----GTAGTAGTTGAGTG
AGAGGAGAGGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTCAGGAGGGGCCTGTGGTCGCCGGAGGAAGACGA
GAAGCTCGTCAAGTACATCACCGCGCATGGCCATGGCTGCTGGAGCTCAGTCCCAAGACAAGCTGGTACGTGCGT--GCG
TGCGGATT----CTCTGCTGCTTCAGTTCCACCAGCTAGCTAGCTGT-GTTCTTGATCACTCACTTTCTGCATTGCTGAA
TATGTGTGTGTTCATCTTCATTCGTGCGCGCAGGGCTGCAGAGGTGCGGCAAGAGCTGCAGGCTGAGGTGGATCAACTAC
CTGAGGCCGGACCTCAAGAGGGGAAGCTTCTCGCAGGAGGAGGAAGCCCTCATCGTCGACCTCCACAGGGTGCTAGGGAA
CAGGTAAACCTTCCTGCTCTGCTCCAGCTTGAATGCATGCATGGTGTTT-GCCCCTACCCTACATGCAAATCAGCTCTGC
ATAGCTGCTGTAACTTCATTCCCCTGTAC-----ACATGACAGTTACTTATCTGTGCGTCTGCATGGCCTACACGCGACG
CGCGTAGTGCAAAATCACATT----AACTTGCTCGAGAAAAGGAATGAAAGGGACACAAATGGCAACAGATTGAGCTAAT
ACCAAAATGTGCGCTGTGCGCTGTGCTTTGCTGCGCTGCAGGTGGGCCCAGATAGCCAAGCACCTGCCTGGCAGAACGGA
CAATGAGGTGAAGAACTTTTGGAACTCCACAATCAAGAAGAAGCTCATATCGCAGGCCGTGGGCAGCCTCCACTCCGGTA
ACATCCCTTCCTCTGCAGGTAACTGGTAGTAGATCATGTACTAGTAACTACTCC--AGTACGTAGGAAA----TTGCAGA
GCCACTAGTTAATTTTCTCTTCCAAAAGAACCATCTAATCTGACACCAAACATGTACGTAGTGGTACACTAGTACTTACC
GTACGTACTAACTCGGAGTTACTATGTCGTTTTTGGTACAGATTTGTACTACAACATTCTGGATGGGGCGGGACAAGGCA
TCGCAGCTGCGGGGTGCGCGTCGCTCAACGGGCTGGACAATGCGGCTCAAGCTGTGGCCACGCAGCCCCCTCCATCCTCC
GCGGCATGGCTCAATTTCACCTCTCAGCCGCTGCTCCTCCCCGTCCACGGCGCCGTCCCCGGCTGCGACCTCCAGTACAC
CGTCGACGGGGAGTTCATCAGGCTGTGCCGCGAGGCGGCTAATGCTTGCCCGGAGAACGGCGCCTCTAGCCTCTTGGCTC
AAGAAGGCGCGGCTGATCGGAGCTGCCTCCCGGTGTTCGCCGAGCCAAAGGGCGCCGGCGCTTACGCCGCCGATCCGGGC
ATGGGTCCGGTAGCGGACTTCATGGACGCCATCCTAGGGTCCTCGTCCACGTCGGCGGCCAGTGTTTCGTCCGTCGACAG
CTTCTCCGCGAACACCGGCATGCAGCTCCACTGGGTTCCCTGAGTTACTGGTTGGGGATATTTGGGTAGGTGTATGTATG
GCCTGATCTAGCAGTTGGCTTCCT-AAATTATATATATACTCCTAGCTGATGATGGAATAATTACCTCATGTACGTTTCC
TAGGGTATACTACTGTGCTAGTATTTACATGAGTTACGTGTAAATATATATTGTAGGAA----TTATATATGTTGTTATG
AGTATATATATCATGCTTGTCCGTGTGCCGAAGAAGAAACTTCTGATTAGCTACACCACATATAGTTTTGTATGCTTCGA
TGTGTACAGCCGGAGGCACGTACCCGATATGCATGCATAGAGACATGCATGACGGTGGGAATATATAGTGTATGCATGAG
CTATAGCTGCGCAAATTATACATACTCCTATCGTCAAGCATTATCATCTTCCTTCCTATCTTATGAGAGGATGTTTTTGA
AGATTCACTCGTGCAGTAACCGGTGCTAAACATGCTGAAATTGTTATATCTGTCAGGTGTAAGCAGT---ATAACAAATA
AACAGTGTC--------A-CTGCAAAACATCTCCCACCCTCATCAGCTTTGAAAGTAAAAATAAAGGTGTTTGGAGCCCA
CGGGTTTCACTGAAATGAAACCTCTGTTGGTAGGCCAAGGTTGATCCACGCAGGCGTCTTGTTTCCAGAAGAACTGAGTT
AATTCGCTGTCTGCAGAAACTGACCAGAACGGCAAAACCGCAACCGTTCAACTGCCAATCACACGGCACGGGCGTAGGTA
AAAGACGGGACTGCGCTACAGTCCTGCAAATGTCTCTGCCGCGGATCGAGCGGCCCGCAGGTTCGCGCGCTCCGGAGGGC
TGCTGGTCGGTCACGGGGCCGTTGCACGAAAGGCACAACCGCACAAGGCGTCATCATGACTTTGATAAAGAGAGGGGCAT
GGCATGGCATCCGGACGCGCAAATTCCCCGTTCCATTTGCGGCTGAACAGGCCATAGATTCTACACTGCACAACAGCAAC
GTATCATGGTGTCACGAAACCTC
>SNPs
--------------S---S-------------------------------------------------------------
--------------------------------------SSSS--------------------------------------
----------------S------------------------------------------S--------------------
-----------------------------SSSSSSSSSSSS---------------------------------------
-----S--------------------S----S--------SS--S--S----------------SS-------S------
--S-----------------------------------S-------------SSS-------------------------
-------------------------S---------S---------SSSSSSS-SS-------------------------
----------------------S---S-------S--SS-S-SS--S--------SS-S----S---------S-S----
SS------------------------------------------------------------------------------
---------------------------S---S------------------S-----------------------------
-------S------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------S-----------SSSS--------------
--SS-------------------------------------------S--------------------------------
--------------------------------------------------------------------S-----SSS--S
--------SSSS-----------------------------S--------------------------------------
----------------------------------------------S---------------------------------
-----------------------S--------------------------------------------------------
---------S-----S---------------------------------------------------------S------
--------------------------S-----------------S-------------------------------S-S-
--S-----SSS----------SSSS----------------------------------------S--------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------------------------------------------SSSS-------
--------------------------------S-----------------------------------------------
-----S----------------S-------------------------------------------------S-------
------------------------------S----------------------------------S--------------
--------------------------------------------------------------------------------
-----------------------------S--S------S----------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--S---------------------S-------------------------------------------------------
-------------------------------S-----------------------------------------S------
-----------------------------S----S-----------------------------------------S---
--------------------------S-------------------------------------S---------------
----------------------S-----------------------------------------------------S---
----------------------------------------------S--------------------SSS----------
------------------S-----------------------------S-------------------------------
-----------------------------------S-----S--------------------------------------
-----SS-------------------------------------------S-----S---S-------------------
---------------------------------------------------------------------------S----
---------------------------S----------------------------------------------------
---------SS--------------S------------------------------------------------------
-----------------------
>forward_365
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGGGCATGTAAGAACGGCAT-----------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_1292
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCTCTGCTGCTTCAGTTCCA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>forward_506
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCCAAATGGTAGCTGCTGCA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_1530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------ATCCTCCTGCTCCAGCTTGA---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_599
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TTCCGCTCATGCAAACTGGA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------CCTGCTCCAGCTTGAATGCA---------------------------------------------
--------------------------------------------------------------------------------
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>forward_1106
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------CTGCGGTGAGTGTGAACTGT--------------
--------------------------------------------------------------------------------
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>reverse_2877
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------ACGA
TGTGTACAGCCGGAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
