>input_sequence_50883
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------------------------------------ATGAATGCCACATCCGGGTTAGCACAATCTGCCAACTTACTCAC
TACGCTACTTTTTTTTAACACGGTA-------CAGACGCGTTGAGGACACGAGGCATGCTGATGGCAACATTGTACACTC
AAACATGCCACTCGTGCGTACTGTCCCAAGATAAAC----TTGGACTCTATTACCTTGACCATTTTTCTGCTAACATACA
CAGGGTTATCCTGGCGATGGGGCTGTACTACTATGGACTGCGCGGCACCAACGCCGCCTACTCCGTCGTCTTCCTCAACC
TCATCCCCATCGTCACCTCCGTGGTCGCCATCCTACTCCGGTACTCGTCCTGACATGCACCAACAAATCTTCACGTGCGC
AACGTGACAGCAATTAATTAGCTACGTAGCATCGTCGACGAGCTGAGCTCCCCCGGCCTCCTCTCTGGTTCTCCAGGGCA
GAGAAGCTGGTATTCAGCAAGTGGCATGGAAAGATGAAGCTCTTGGGCATCGTGGCCTGCGTCGGGGGAACAATGGTGGT
CGGCCTCTACAAGGGCAAGATGCTGCACCATCCTTGGCCGACCCACCTGCTGAGGTCCCGTACTCACACGACCGCAGCTC
CGGCAGCTCACCACGACATGGTCGTCGGCACGTTGTTCCTCTGCGGTAGCTGCCTCGGATACGCCTTCTGGTTCATCATA
CAGGTGCCATACTGACCTCGGAATAATCTGGCAATAGTACATTTTGGCAATCGCTTCACTTCAACATTTGCAACTGCTTC
ACCTCAACATATTTGCAATTGCATCTACAGGTTAAAATTGCCAAGGTATTCCCATCTAGGTACTGGGTGGCGACGCTGAC
GTGTCTGTTGGGAAGCCTGCAAGCATTCGTCATCGGCATCCTCATCGACCCTCACACATCCGCATGGAGGCTCAAGTGGG
ACCTGCAGCTCTTAACCGTCGTCTATTCAGTAAGACATTG------GCTTCCTGTCTGTCATCTCTCGTACGTCTCACCA
--ACGAAACATGAAATCATGTCGATGCTTAATTTGCATTTCACTTCCAAGGGGGTGTTCAACACCGGTGTTGCATTGGTC
CTCATGTCGTGGGTGGTGAAGCGCCGTGGGCCCATCTACCCCTCCATGTTTAATTCCCTCACGATGGTAGCGACAGTGAT
CATGGACTCGACACTGCTTGGCACCAGCATCTTCTTAGGCAGGTGAGCTAGCTTCTCGACTAGGAGGATAAACCTTATCA
GTTTAGTTAGTCCAGATATGTATGTCAA-TCTCAATTTCCATGATACCATCAACAG-------------CATAATAGGGA
CGGTGCTGGTCATTGTGGGGCTATACGCATTTCTGTGGGGGAAAGGGAAGGAGCTGCGGGAAGCTATGTCGCTAACGAAG
AACGCCAGTGAGAATGAACACCCTGGAGACGGTGATGAGCATGGTGAGCCAGTGTTGGAGGTGCGTCGTCGCGGCGATGA
AATAGTATAG----------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr4B_1_TraesCS4B01G028400
CGTCGCGCCCCTCGCCTTCCTCTTTGAGAGGTTTGTTGTTGTTCCTGCCTGCG----CACCGTCGACGCCCCCTC----T
TTGCTTCTCTAGCTAGCTAATTCTGCTTAGAGGTAACAAATGGTTCTGTCACGCACAAAAGCAATAACATAACTTGTGTT
ATTATCTCCATTATTTTCTTCTTCGGTCGGCTAGTTTTG-TTTGTAGAGTAATTATTAGTTTCCTTTCTCAAACAGAAAA
G-AAATTTTAATTTTCAATCGTGAAATTAATCGACGAACATTATAAGACATAAG--------------------------
--------TTTC--------------------------------TGATAATAAGACCTGCTACAATGCTTGCATAGTTCG
CTAGCTAGTTGCATGATCCCCTA---------------------------------CACTTATCTATCCTTCAACATAGA
AAGCCGGACAATTAGCTTTGTGGCCGACGGATTGTAGCCTATGTCCTGAAAAAGAAAA-AGGAAAAGGAAAATAAGAACA
ATTTAATTACTCCGCGTTACTACTACTTCAGTTCTTTCAAGTT-GACTTTGGATTGCAAAAACCAAAAAACCCC------
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-------------------------------CCACAATCCCACATACTTCCTCCGTTCAGAATTACTTGTTGTAGAAATG
GGTGTATCTAGATGCATTTTAGCTCTAGATACATCCATTTTCAAGACAAGTAATTCTGAACGGAGGGAGTACCAGATATC
CTAACCTTTTCCTCTTTTAAGAGAGCCACATATCTTAACTGGAAAAGACGATATTGCTTATGACGTTGGTTATCTGTCAG
TTCCTGGCATGCGTAATCCAATCCTTGATTGAAAACAAAGATAAATACTAGTACAAAACACAGTCGAATGCGGTAAGCTA
AGATGGTCTAGTTTGCACCAATGCTTGACGTACGCCTTGTCATTTCAATACACCATTTTGCACTCAACGTTCCCAGTGAT
TACTTGCTGG--------CAGTGCCGTTGCTAATTTTTCATTTCCTGACTGACGTCACCTTATCTCGCAGGAAAAAAGCG
AAAATCCCAAACCTCATAGAGTGGGGCTGGATTTCCATGAATGCCACATCCGGGTTAGCACAATCTGCCAACTTACTCAC
TACGCTACTTTTTTTTAACACGGTA-------CAGACGCGTTGAGGACACGAGGCATGCTGATGGCAACATTGTACACTC
AAACATGCCACTCGTGCGTACTGTCCCAAGATAAAC----TTGGACTCTATTACCTTGACCATTTTTCTGCTAACATACA
CAGGGTTATCCTGGCGATGGGGCTGTACTACTATGGACTGCGCGGCACCAACGCCGCCTACTCCGTCGTCTTCCTCAACC
TCATCCCCATCGTCACCTCCGTGGTCGCCATCCTACTCCGGTACTCGTCCTGACATGCACCAACAAATCTTCACGTGCGC
AACGTGACAGCAATTAATTAGCTACGTAGCATCGTCGACGAGCTGAGCTCCCCCGGCCTCCTCTCTGGTTCTCCAGGGCA
GAGAAGCTGGTATTCAGCAAGTGGCATGGAAAGATGAAGCTCTTGGGCATCGTGGCCTGCGTCGGGGGAACAATGGTGGT
CGGCCTCTACAAGGGCAAGATGCTGCACCATCCTTGGCCGACCCACCTGCTGAGGTCCCGTACTCACACGACCGCAGCTC
CGGCAGCTCACCACGACATGGTCGTCGGCACGTTGTTCCTCTGCGGTAGCTGCCTCGGATACGCCTTCTGGTTCATCATA
CAGGTGCCATACTGACCTCGGAATAATCTGGCAATAGTACATTTTGGCAATCGCTTCACTTCAACATTTGCAACTGCTTC
ACCTCAACATATTTGCAATTGCATCTACAGGTTAAAATTGCCAAGGTATTCCCATCTAGGTACTGGGTGGCGACGCTGAC
GTGTCTGTTGGGAAGCCTGCAAGCATTCGTCATCGGCATCCTCATCGACCCTCACACATCCGCATGGAGGCTCAAGTGGG
ACCTGCAGCTCTTAACCGTCGTCTATTCAGTAAGACATTG------GCTTCCTGTCTGTCATCTCTCGTACGTCTCACCA
--ACGAAACATGAAATCATGTCGATGCTTAATTTGCATTTCACTTCCAAGGGGGTGTTCAACACCGGTGTTGCATTGGTC
CTCATGTCGTGGGTGGTGAAGCGCCGTGGGCCCATCTACCCCTCCATGTTTAATTCCCTCACGATGGTAGCGACAGTGAT
CATGGACTCGACACTGCTTGGCACCAGCATCTTCTTAGGCAGGTGAGCTAGCTTCTCGACTAGGAGGATAAACCTTATCA
GTTTAGTTAGTCCAGATATGTATGTCAA-TCTCAATTTCCATGATACCATCAACAG-------------CATAATAGGGA
CGGTGCTGGTCATTGTGGGGCTATACGCATTTCTGTGGGGGAAAGGGAAGGAGCTGCGGGAAGCTATGTCGCTAACGAAG
AACGCCAGTGAGAATGAACACCCTGGAGACGGTGATGAGCATGGTGAGCCAGTGTTGGAGGTGCGTCGTCGCGGCGATGA
AATAGTATAGGGTGTGTTCATA--------CTGACCAAAGATGGTGTAAATGTGCGGTCACTTACATTAGAACTATCGAT
ACTATGGATTAAGATTTGGACATCTTCAGAATTCAACATCCTGTATTTGTTCAATGAGCATTTAATTCAGTGTTGCTTTT
CGATGGAAAAAAAAATTTGTATTGCGGT-CCCCTCTTTTAGCTAGTTAACTATGGAGCGTTGCAACTTGCAACCATATCA
TTTCTTCTTTATATAAGAGTTCATTCAGCTTGTATGAAGGCTTCCTCACCTCCTTACTGTCAGCTCC-------------
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--ACACAGCAGCAAACTGTTCAGTTCAGAACGGACCGATTCAAGCTCGCGAAGTATGTTACGTACCAAACTTGCGACTGC
ACCAAGCTTGCAACGATTTCATCACGCTTCCTAGGCAATCCTGGATAGCGCCCAGGTCACTCTTATCACCAGCTGCAGCA
CAAGCCTACTCGATAACTTGTGGCAAATCAGACGCCCTTTCCCAAAAGAGTTCATACTGCCGGCATCGTTTCGTATTCTG
TGGCAATTTTCTCAGCTTGAAGACGGACCAACAGTGCACAATGGTGAGAGCATGAGGAAATAATGTGTTTGACCGAGGCA
TCAGGGAAAGTATCTCGCCAACATGCATCAGCCACGACATGATCGAGCCTCAC-CTTGACATTCTTCCTACCTCCCCTTT
TATTATCATAAGTGAAGGCAACTCCTTTTAAGCCCGGATCAACAAGTTCACAATCATGAAGGGCATCTCGGAAGGCCGCC
ATTTGTCCTCTAGCTCGAGTGGTGAAGGAAAAGTGCTCAAATAGCCATAGCGCTTCACTGAAATCG-CCCATGACGGTAA
ATGGCAAATCTGACTTGGATCTCAACCGCCTCAGTGTGTCCCACATGAGATGTCTATTTTCTACCTTTGGCTCTCCATAC
ACACAAAGTTAATCTCCATGTCACAGCGGCCGGAGACGATCCCACGCATGCATCAATGTGCCGTTCATTAAGATCA
>chr4D_1
CGTCGCGCCCCTCACCTTCGTCTTCGAGAGGTTTGTT----------CGTGCGCGCACACCATCGACGCCCCTCTTTAAT
TTGGTTCTCTAGCTAATT-------CTTAGAGGTAATAAACGGTTCTGTCACGCACAAAAGCAATAACATAACTTGT-TT
GTTCTCTCCATTATTTTCTTCTTCGGTCGGCTAGTTTTG-TTTGTAGAATAATTATTAGTTTCCTTTCTCAAAAAGAAAA
ATAAAAATTAATTTCCAATCGCGCAATTAATGGATGAACATTATAAGACATAAGAGACACTGGCCATCGGAGAGAGCACC
ACTAAAATTTTC--------------------------------TGATAATAAGACCTGCTACAATGCTTGCATAGTTCG
CTAGC----TGCATGATCGCCATGACACAACAATGTGTATGTAAGACGGCGTGATCCACTTATCTACCCTTCAGCATAGA
AAGCCAGACAATTAGCTCTGTGGCCCAGGGATTGTAGCCTATGTCCTGAAAAAGAAAAAAGGGAAAGTAAAATAAGAACA
----ATTTACTCCAAGTTACTACTACTTCAGTTCTTTAAAGTT-GACTTTGGTCTGCAAAAACGAAAAAACCCCAC----
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--------------------------------------CCCACATGTATCATAAC-------------------------
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--------TTATTTTTCTAAGAGAGCCAGATATCTTAACCA-AAAAGACGATATTGCTTACGACGGTGGTTATCTGTCAG
TTCCTGGCATGCAT-----AATCCTTGACTGAAAACAAAGATAAATACCA----AACACACAGTCGGATGCGGTAAGCGA
AGATGTTCTAGTTTGCACCAATGCTTG----ACGCCTTGTCATTTCAATACACCATTTTCCGCTCAACGTTCCCAGTGAT
TACTTGCTGG--------CAGTGCCGTTGCTAATTTGTCATTTCCTGACTGACATCACCTTATCTCGCAGGAAAAAAGCC
AAAATCCCAAACCTCATAGAGTGGGGCTGGATTTCCATGAATGCCACATCCGGGTTAGCACAATCTGCCAACTTACTCAC
TACGCTACTTTTTTTAGTAAGGTCGGTGTGAGCAGGCACGTTGAGGACACGAGGCATGCAGATGGCGACGTTGTACACTC
AAACATGCCACTCGTGCGTACTGTCCGCCCAAGATACACTTTGGACTCTATTCCCTTGACCATTTTTCTGCTGACATACA
CAGGGTTATCCTGGCGATGGGGCTGTACTACTATGGACTGCGCGGCACCAACGCCACCTACTCCGTCGTCTTCCTCAACC
TCATCCCCATCGTCACCTCCGTGGTCGCCATCCTACTCCGGTACTCGTCCTGACATGCATGAACAAATCTTCACGTGCGC
AACGTGACAG----TGATTAGCTACGTAGCATCATTGACGAGCTCCCCCGG--------CCTCTCTGGTTCTCCAGGGCA
GAGAAGCTGGTATTCAGGAAGTGGCATGGAAAGATGAAGCTCTTGGGCATCGTGGCCTGCGCCGGGGGAACAATGGTGGT
TAGCCTGTACAAGGGCAAGATGCTGCACCATCCTTGGCCGACCCACCTGCTGAGGTCCCATACTCAGGCGGCCGCAGCTC
CGGCAGCTCACCACAACATGGTCATCGGCACGTTGTTCCTTTGCGGTAGTTGCCTCGGATATGCCTTCTGGTTCATCATA
CAGGTGCCATACTGACCTTGGAATAATCTGGCAATAGTACATTTTGGCAATTGCTTCACTTCAACATTTGCAATTGCTTC
ACCTCAACATTTTTGCAATTGCATCTACAGGTTAAGCTTGCCAAGGTATTCCCATCTAGGTACTGGGTGGCGACGCTGAC
GTGTCTGTCGGGAAGCCTGCAAGCATTCGTCATCGGCATCCTGATCGACCCTCACACGTCCGCATGGAGGCTCAAGTGGG
ACCTGCAGCTCCTAACCGTTGTCTACTCGGTAAGACGTTG------GCTTCCTGTCTGTCATCTCTCGTACGTCTCAC--
-----AAACATGAAATCATGTCGATGCTTAATTTGTGTTTCACTTCCAAGGGGGTGTTCAACACCGGTGTTGCATTGGTC
CTCATGTCGTGGGCGGTGAAGCGTCGTGGGCCCATCTACCCCTCCATGTTTAATTCCCTCGCGATGGTAGCGACGGTGAT
CATGGACTCGACACTGCTTGGCACCAGCATCTTCTTAGGCAGGTGAGCTAGCCTCTCGACCAGGAGGATAAACCTTATCA
GTTTAGTCAGTCCATATATGTATGTCAAATCTCAGCTCCCATGATATCATCAACAG-------------CATGATTGGGA
CGGTGCTGGTCATTGTGGGGCTATACGCATTTCTGTGGGGGAAAGGGAAGGAGCTGCGGGAAGCTATGTCGCTAACGAAG
AACGCCGGTGAGAATGAAGACCCTAGAGATGGTGATGAGCATGGTGAGCCAGTGTTGGAGGTGCGTCGTCGCGGCGATGA
AATAGCATAGGGTGTGTTCATC--------CTGACCAAAGGTGGTGTAAATGTGCGGTCATTTACATTAGAACTATCGAG
ACTATGGATTAAGATTTGGACATCTTCAGAATTCAACATCCTGTATTTGTTCAATGAGCATTTAAT--------------
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----------------------------------------------------------------------------
>chr4A_3
--TCGCGCCCCTCACCTTCGTCTTCGAGAGGTTTGTT----------CCTGCG----CACCATCGACATCCCCTC----T
TTGGTTCTCTAGCTAATT-------CTTAGAGGTAACAAATGGTTCTGTCACGCACAAAAGCAATAACATAACTTGT-TT
ATTCTCCCCATTATTTTCTGCTTCGGTCGGCTAGTTTTGTTTTGTAGAATAATTGTTAGTTTCCTTTCTCAAAAAGAAAA
G-AAAAAATGATTTCCAATCGTGCAATTAATGGATGAACATTATAAGACATAAGAGAGGCTGGCCATCGGAGAGAGCACC
ACTAAAAATTTCTGATAATAAGACCTGCTTTTTTTTTGCGGGAATGATAATAAGACCTGCTACAATGCTTGCATAGTTCG
CTAGC----TGCATGGTCGCCATGACACAACAATGTGTATGTAAGACGGTGTGATCCACTTATCTATCCTTCAACATCGA
AAGCCAGACAG-TAGCTTTGTGGCCGAGGGATTGTAGCCTATGTCCTGAAAAAGAAAG-AGGGAAAGTAAAATAAGAACA
----AATTACTCCACGTTACTACTACTTCAGTTCTTTAAAGTTTGACTTTGGACTGCAAAAACGAAAAGAAAAGAAAAAA
ACACAATCCCACGAGAGAGGATTTGCTACCATCCACGGGACCTCCCGTGCATGCATTCACCGCCTTGTCTATTACTATGT
GGGACCACTGACATCACCTATAAGATTTTCTCTCTCATCTAGCATACATTCACATGTTATTCTACTCACCAAGTTTCATC
CAAAAAAATAGATGCATACTGTATGTTGAAATAAAAGTTTGATTTACTTTCTGTTTGCATAATTGTTTTTTTTAACAAGA
TCTTTCAAACAAGACCAATATTGAATATATTTTTAGGAAATATTTTTTACAAGTAAACTACCATGCTCCAAACTTGTTTC
ATACAAATTTATTAATTTGATGCAAAAATTCAACAATGAGTTATTCAAACAAATCTTTGAACTTTGATAGTGTTTGACAA
AGTATCTCATAGTTTTGTGTACTTTTAATAGTGTTTCAATGTGTATAAAATTTGATTATTTTTAGAACATGCTGAAACAC
ATTCAAAAGTGGTATAGTTTTGAAGTTCTCCTCGTCATAAACACAAATATGTAAACGGGTCATAAATTATACTTTTGGTT
TAAAAGATAAAATAGTTTTAAACATGGAAATAAAATAACAAAGCATGGGATGGTGAAGCATAGGCTTGCATGTGGTCAGA
GGAAGATCTGACAAACTACAAAGAGCATTAATGCGCAACATCGAATTTCCAAGAAAAATGAACGGCCCTCCCATGCACAG
AACCTCCCGTGCATGGGAGAAATGCTTTTCTCCACAATCCCACATGTATTATAAC-------------------------
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--------TTATTTTTATATGAGAGCCAGCTAAGATGTTCTAG-------------------------------------
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-------CTAGTTTGCACCAATGCTTC----ACGCCTTGTCATTTCAATACACCATTTTTCACTCAACGTTCCCGGTGAT
TACTTGCTGGCACAGTGGCAGTGCTGTTGCTAATTTGTCATTTCCTGACTGACATCACCTTATCTCACAGGAAAAAAGCG
AAAATCCCAAACCTCATAGAGTGGGGCTGGATTTCCATGAATGCCACATCCGGGTTAGTACAATCTGCCAACTTACTCAC
TACGCTACTTTTTTTAGTAAGATCGGTGTGAGCAGATACGTTGAGGATGCGAGGCATGCAGATGGCGCCGTTGTACACTC
AAATGTGCCACTCGTGCGTACTGTCCGCCCAAGATACACTTTGGACTCTATTCCCTTGACCATTTTTCTGCTGACATACA
CAGGGTTATCCTGGCAATGGGGCTGTACTACTATGGACTGCGCGGCACCAACGCCACCTACTCCGTCGTCTTCCTCAACC
TCATCCCCATTGTCACCTCCGTGGTTGCCATCCTACTCCGGTACTCGTCCCGACATGCATGAACAAATCTTCACGTGCGC
AACGTGACAG----TAATTGGCTACGTTGCATCGTTGACGAGCTCCCCGGG--------CCTCTCTGGTTCTCCAGGGCA
GAGAAGTTGGTATTCAGGAAGTGGCATGGAAAGATGAAGTTCTTGGGCATCGTGACCTGTGTCGGGGGAACAATGGTGGT
CAGCCTCTACAAGGGCAAGATGCTGCACCATCCTTGGCCGACCCACCTGCTGAGGTCCCATACTCAGGCGGCCGCAGCTC
CAGCAGCTCACCACAACATGGTCATCGGCACATTGTTCCTTTGCGGTAGCTGCCTCGGATATGCCTTCTGGTTCATCATA
CAGGTGC--TACTGACCTTGGAATAATCTGGCAATAGTACATTTTGGCAATTGCTTCACTTCAACATTTGCAATTGCTTC
ACTTCAACATTTTTGCAATTGCATCTACAAGTTAAGCTTGCCAAGGTATTCCCATCTAGGTACTGGGTGGCGACGCTGAC
GTGTCTGTCGGGAAGCCTACAAGCATTCGTCATCGGCATCCTCATCGACCCTCACACGTCCGCATGGAGGCTCAAGTGGG
ACCTGCAGCTCCTAACCATTGTCTACTCGGTAAGACATTG------GCTTCATGTCTGTCATCTCTCGCATGTCTCACCA
--GCAAAACATGAAATCATGTCGATGCTTAATTTGCGTTTCACTTCCAAGGGGGTATTCAACACCGGT-TTGCATTGGTC
CTCATGTCGTGGGCGGTGAAGCGCCGTGGGCCCATCTACCCCTCCATGTTTAATTCCCTCGCGATGGTAGCGACGGTGAT
CATGGACTCGACACTGCTTGGCACCAGCATCTTCTTAGGCAGGTGAGCTAGTTTCTCGACCAGGAGGATAAACCTTATCA
GTTTAGTCAGTCCAGATATGTATGTCAAATCTCAGTTTCCATGATATCATCAACAG-------------CATGATAGGGA
CGGTGCTGGTCATTGTGGGGCTATACACATTTCTGTGGGGGAAAGGGAAGGAGTTGCAGGAAGCTATATCGCTAACGAAG
AACGCCGGTGAGAATGAAGACCCTGGAGACGGTGGTGAGCATGGTGAGCCAGTGTTGGAGGTGCGTCATCGCGGCGATGA
AATAGCATAGGGTGTGTTCATC-----ATCCTGACCAAAGATGGTGTAAATGTGCGGTCATTTACATTAGAACTATCGAG
GCTATGGATTAAGATTTGGACATCTTCAGAATTCAACATCCTGTATTTGTTCAATGAGCATTTAATCCA-----------
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>chr4D_1161
CTATTGTCC-----------------------------------------------------------------------
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--------------------------------------------------------TGACCATTTCTCTGCTAACACATA
CAGGGTTATCCTGGCCATGGGGTTGTACTACTATGGACTGCGCGGCACCAATTCCACCTACTCCGTCGTCTTCCTCAACC
TCATCCCCATCATCACCTCTATGGTTGCCATCCTACTCCGGTACTCGTCCTGACAAA---GAACAAATCTTCACATGCGC
AACGTGCCAG----TAATTAGCTA--TAGCATCGTTGACGAGCTCCCC-GG--------CCTCTCTGGTTCTCCAGGGTA
GAGAAGCTGGTATTCAGGAAGTGGCATGGAAAGATGAAGCTCTTGGGCATCGTGGCCTGCATCGGGGGAACAATGGTGGT
CAGCATATACAAGGGCAAGATGCTGCACCATCATTGGCTGACCCACCTACTGAGGTCCCGTACTCAGGTGGCCGCAACTC
CGGCAGCTCACCACAACATGGTCGTCGGCACTTTGTTCCTCTGTGGTAGCTGCCTCGGATACGCCTTCTAGTTCATCATA
CATGTGCCATGCCGACCTCGGAATAATCTGGCAATAGTACATTTTGGCAATTGCTTCACTTCAACAATTGCAATTGCTTC
ACTTCAACATTTTTGCAATTGCATATATGGGTTAAGCTTGCCATGGTATTCCCATCTAGGTACAAGGTGGCGACGATGAC
GCGTCTGTCAGGAAGCCTGCAAGCATTCGTCATCGGCATCCTGGTCGACCCTCAGACATCCGCATAGAAGCTCAAGTGGA
ACCTGCAGATTCTCGCTGTTGTCTACTCGGTAAGAGGATATTGGTTGCTTCATGTCTGACATCTCTCATCTCACCGACGA
AGACGAAATATGAAATCTTGTCGATGCTTAATTTGCATTCCAATTCCAAGGGGGTGTTCAACACTGGCGTTACGTTGGTC
CTCATATCATGGGATGTGAAGCATCGCGGGCCCAT---------------------------------------------
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>chr4D_2096
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------------------------------CCCATCTACCCGTCCATGTTCAACTCTCTCACGATGGTAGCCATGGTGAT
CATGGACTCGACACTGCTTGGCACCGGCATCTTCTTAGGCAGGTCAGCTAGCTTCTCGACCAGGAGGATAAACCTTATCA
GTTTAGTCAGTCCAGATGTGTGTGTCAAATCTCAGCTTCACATGCCATGCATCCAAAATCATCTGTGGCCATAATAGGGA
CGCTGCTGGTCATTGTGGGGCTACACACATTTTTGTGGGGGAAAGGGGAGGAGTTGTGGGAAGCTATGTCTGCAAGGAAG
AGCCCCGGTGAGAATGAAGATATCGGAGACCGTGATGGGCGTGGTGGTCAAGTGTTGGAGGTGCGTCCTGGAGATGATGA
GATAGCATAGGGACTGTAGCCGTGTTTATCCTGATCAAAGATGGTGTAAATGTGCGGTCACTTACTTTAGAACTATCGAG
ACTATAGATTAAGATTTGGACATCTTTAGAATCCAGCATCTTATATTTGTTCAATGAGCATTTAAT--------------
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>chr4D_2596
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------------------------------------------------------------------------TTGCTTTC
CGATGGAAATTT---TTTGTATTACGGTCCCCCTCTTTTAGCTAGTTAACTATAGAGCGTTGCAAC-------CATAGCA
TTTCTTCTTTATATAAGAGTTCATTCAGCTTGTCCGAAAGCTTCCTCACCTCCTTACTGTCAGCTCCTTAACTATAGAGC
ATTGCAACCATAGCATTTCTTCTTTATATAAGAGTTCATTCAGCTTGTCCAAAAGCTTCCTCACCACCTTACTGCCAGCT
CCACACAGCAGCAAACTATTCAGTTCAGAACGGACCGATTCAAGCTCGCGAAGTATGT----TACCAAACTTGCGACTGC
TCCAAGCTTGCAATGATTTCATCACGCTTCCTAGGCAATCCTGGATAGCGCCCATGTCACTCTTATCACCAGCTGCAGCC
CGAGCCTGTTCAATAATTTCCGGCAAATCAGACGCCCTTTCCCAAAAGAGTTCATACTGCCGGCATCGTCTCTTATTCTG
TGGCAAT-TTCTCAGCTTGAAGACGGACCAGCAGTGCACAATGATCAGAGCATGAGGAAATAATGTGTTTGACCGAGGCA
TTAGGGAAAGTATCTCGCCAACCTGCATCAGCCATGACACGATCAAGCCTTACTTTTGACATTCTTCCTACCTCCCCTTT
TATTATCATAAGTGAAGGAAACTCCTTTAAAGCCCAGATCAACAAGTTCACAATCATCAAGGGCATCTGGGAAGGCCACC
ATATGCCCTTCAGCTCGAGTGGTGAAGGAAAAGTGCTCAAATTGCCATAGCGCTTCGTTGAAATCG-CCCATGACGGTCC
ATGGCAAATCTGACTTGGATTTCAGCTGCCTCTATGTGTCCCACATGAGATGTCTATTTTCTACCTTTGGCTCTCCATAC
-------------CTCCATGTCACAGCGGCGGGAGACGATCCCACACATGCATCAATGTGCCGTTCATTGAGAT--
>chr7A_2596
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------------------------------------------------------------------------TTGCTTTC
CGATGGAAAAAAAA--TTGTATTACGGTCCCCCTCTTTTAGCCAGTTAACTCTAGAGCGCTGCAAC-------CAAAGCA
TTTCCTCTTTATATAAGAGTTCATTCAGCTTGTCCGAAAGCTTCCTCACCTCCTTACTGTCAGCTCC-------------
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--ATGCAGCAGCAAACTATTCAATTCAGAACAGACTGATTCAAGCTCGCGAAGTATGT----TACCAAACTTGCGACTGC
TCCAAGCTTGCAACGATTTCATCGCGCTTCCTAGGCAATCCTGGATAGCGCCCAGGTCACTCTTATCACCAGCTGAAGCC
CAAGCCTGTTCAATAATTTCTGGCAAATCAGACGCCCTTTCCCAAAAGAGTTCATACTGCCGGCATCATCTCTTATTCTG
TGGCAAC-TTCTCAGCTTGAAGACGGACCAGCAGTGCACAATGGTCAGAACATGAGGAAATAATGTGTTCGACCGAGGCA
TCAGGGAAAGTATCTCGCCAACCTGCATCAGCCACGACACGATCGAACCTCAC-CTTGACGTTCTTCCTACCTCCCCTTT
TATTATCATAAGTGAAGGGAACTCCTTTAAAGCCCAGATCAACAAGTTCGCAATCATCAAGGGCATCACGGAAGGCCACC
ATTTGCCCTTAAGCTCGAGTGGTAAAGGAAAAGTGCTCAAATTGCCATAGCGCTTCGTTGAAGTCG-CCCATGACGGTCC
ATGGCAAATCTGACTTGGATTTCAACTGCCTCAATGTGTCCCACATTAGATGTCTATTTTCTGCCTTTGGCTCTCCATAC
ACACAA-GTTAATCTCCATGTCACAGCATCTGGAGACGATCCCACATATGCATCAATGTATCGTTCATTGAGATC-
>chr7B_2618
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--------------ATTTGTATTACAGTCCCCCTCTTTTAGCCAGTTAACTCTAGAGCGATGCAAC-------CAAAGCA
TTTCCTCTTTATATAAGAGTTCATTCAGCTTGTCTGAAAGCTTCCTCACCTCCTTACTGTCAGCTCC-------------
--------------------------------------------------------------------------------
--ATGCATCAGCAAACTATTCAATTCAGAATGGACTGATTCAAGCTCGCGAAGTATGT----TACCAAACTTGCGACTAC
----------------------------TCCTAGGCAATCTTGGATAGCGCCCAGGTCACTCTTATCACCAGCTGAAGCC
CAGGCCTGTTCAATAATTTCTGGCAAATCAGAAGCCCTTTCCCAAAAGAGTTCATACTGCCGGTATCGTCTCTTATTCTG
TGGCAAT-TTCTCAGCTTGAAGATGGACCAGCAGTGCACAATGGTCAGAACATGAGGAAATAATGTGTTCGACCGAGGCA
TCAGGGAAAGTATCTCGCCAACCTGCATCAGCCACGACACGATCGAGCCTCAC-TTTGACATTCTTTCTACCTCCCCTTT
TATTATCATAAGTGAAGGGAACTCCTTTAAAGCCCAGATCAACAAGTTTGCAATCATCAAGGGCATCACGGAAGGCCACC
ATTTGCCCTTCAGCTCGAGTGGTAAAGGAAAAGTGCTCAAATTGCCATAGCGCTTCGTTGAAGTTG-CCCATGACGGTCC
ATGGCAAATCTGACTTGGATTTCAACTGCCTCAATGTGTCCCACATGAGATTTCTATTTTCTGCCTTTGGCTCTCCATAC
GCACAA-GTTAATCTCCATGTCACAGCGTCTGGAGACGATCCCACATATGCATCAATGTACCGTTCATTGAGATC-
>chr4A_2702
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-------------------TTCATTCAGCTTGTTCGAAAGCTTCATCACTTCCTTACTGCCAGCTCC-------------
--------------------------------------------------------------------------------
--ACGTAGCAGCAAACTATTCAGTTCAGAAGGGACCGATTCAAGCTCACGAAGTATGT----TACCAAATTTGGGACTGC
TCCAAGCTTGCAACGATTCCATCGCGCTCCCTAGGCAGTCCTGGATAGCGCCCAGGTCACTTTTATCACCAGTTGCAGCC
CAAGCCTGATCAATAATTTCCGGCAAATCAGACGCCCTTTCTCAAAAGAGTTCATACTGCCGGCATCGTCTCTTATTTTG
TGGCAAT-TTCTTAGTTTGAAGACGGGCCAGCAGTGCACAATGGTTAGAGCATGAGGAAATAATGTGTTTGACAGCGGCA
TTAGAGAAAGTATCTCCCCAACCTGCGTCAGCCACGACACGATCAAGCCTCAC-CTTGACATTCTTCCTACCTCCCCTTT
TATTATCATAAGTGAAGGGAACTCCTTTAAAGCCCAGATCAACAAGTTCACAATTATCAAGGGCATCTGGGAAGGCCATC
ATTTGCCCTTCAGCTCGAGCGGTGAAGGAAAAGTGCTCAAATTGCCATAGCGCTTCGCTGAAATCACCCCATGACGGTCC
ATGGCGAATCTTACTTGGATTTCAGCTGTCTCAATGTGTCCCACATAAAATGTCTATTTTCTATCTTTGGCTCTCCATAC
ACACAA-GTTAATCTCTATGTCACATTGGCTGGATACGATCCCACACATGCATCAATATACCGTTCATTGAGATC-
>SNPs
-------------S-----S----S------------SSSSSSSSSS--------------S------------------
---S-----------SS-SSSSSSS----------------------------------------------------S--
---S--------------------------------------------S------------------------S------
-----SS-------S--------S-------S--S---------------------------------------------
--------------------------------------------------------------------------------
-----SSSS---------S--SS---------------------------------------------------------
-----S---------------------S----------------------------------S----S------------
SSSS---------S-----------------------S---------------S---------S----------------
--------------------------------------------------------------------------------
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---------------------------------------------SSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS--SS-S--S-----------S----------SSS------------------S----S--------------
------------S-SSSSS---------S-------------------S-SSSS--S---------S-----------S-
-----S---------------------SSSS----------------------------S--------------------
------------------------------------S----------------S--------------------------
--------------------------------------------------------------------------------
---------------SSSS-S-SSS------------S---------------------S------S--S----------
--------------------------SSSS-SS-SS----------------S---------------------------
-------------------------------------------------------S------------------------
-----------------------------------------------------------SS-------------------
----------SSSS---------------------S--------SSS-SSSSSSSSSSS---------------------
-----------------S--------------------------------------------------------------
-S----------------------------------------------------------------SS--S---------
--------------S-----------------------------------------------------------------
---------------------------------------------------S---------------------S------
----------S------------------------SS-------------------------------------------
--------S-----------------------------------------------------------------------
-----------S-------S-----S--S---------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------S-----
------------------------------------------------------------S-------------------
-------S--------------------------S-----------S---------------------------------
--------------------------------------------------------------------------------
------S-----------S-------------------------------------------------------------
-----S---------------S---------------------------------------------------------S
------------------------------------------------------------------S--SSS-------S
-----------------------S-----------------------------S------------SSSSSSS----S--
---------------------------------S----S-----------------------------------------
--------------------------------------------------------------------------------
-----------------S----------------------------------------SSSS------------------
S------------------------------------------------------------------------------S
-------SS--S----S--S-------------------------------------------------S--S-------
-------S----------------------S--------------S----------------------------------
----------------------S----------------S----------------------------------------
------------------S---------S------S---------------------S-------------------S--
-----S---SS-------------------------------S-------------S---------------------SS
--------------------S-----S------S----------------------------------------------
------S-----------------------S--------------S-----------------------S-----S
>forward_1616
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----------------------------------------------------------------------------TCAG
TTCCTGGCATGCGTAA----------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_3634
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---------------------------------ATGAAGGCTTCCTCACCTCC---------------------------
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----------------------------------------------------------------------------
