>input_sequence_50875
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-------------------------------------------------A----CACGTCGTGCGTTGTTTGCGTGCGTG
C-TATA-TCTGCGCTCAACATTTTGCGTGCAACTCCGGCCGGAGATCGCTCGGCGCCGTCGGT----GCGTGAGTGCGTA
CATACATGGTGGCGGGGTTTCTGCTGGAGAGTGAGGTGTCCGACCTCTGCATCGGCAAGCCGCCGATCAGGTGGCTGCCG
CCCTCGTCCACCGTGGCCAGCGCCGTCGACGAGCTCGAGGCCGACGGGGGGCCGTGCGGCGCCGTCGCCGTGTGGGACGG
CGAGGCGGGGGCGGCCGTGGCGGGCAGGGTGCGCATGGCCGACGTGCTATTCTTCCTCTGCGCCGACGAAGGCAACAACC
TACAGGCCACGCTCGCCGACCTCCTGGCCGCAGCCGGGGCGCCGCCCGTCCGCCGCGTGGAGCCCGATGCGAGGTTGGTG
GCGCGCACGCGTCCCTCCCTTGGGGCCGCCACGTACATGCACGCTGATCCGCCAGCTCTTTCTTAATGAGGTTAGCTTGT
TTGCTTGTGTGCAGCGTGCTGGAAGCGGTGGACGCGCTGCTGGGCGGCGCGCAGAGCCTCGTGGTGCCCATCCGCGACAA
CCGGCGCCCGGAAACGGCGCAGCTAGAAGCAGAGTCGATGTGCTGGGTCACGGTGGAGGACGTGGCGCGCTTCTTCCTCG
GCTCCGTCGCGCTCTTCTCGCAGATCGCCTTGCGCTCCGTCTCCGACCTCGGCGCCGTCCGCCCGGCCCGCAGCGTGCTC
GCCGTTGCGCCCGGAGACGACACGCTCTCCGCCACCGAGCCGCTCCTTCGCGCGGCCCTGGCGACGCACGCCTCCGTCGC
CGTGGTGTCCGGACGCTGCCTCGTCGGCGAGATCTCGCCGTTGACGCTCTGCTCCTCCCTCGACG---------------
---CGCCCATGTCCTTGATCGACTCTGCCCGCGCCCCGCGAGAAGCCGCCCTCGGGCCCCGCCTCCGCAGCCGCAACCTG
CACGGCGTGCTCGACCTCCTCAACGCCGGCGGCCGCGACCTGCCGTCCCCGTCCTCTTCCTCTTCATCCTCCTCGTCGTG
CGCCTCCTCCTCTTCCTCCTCGTCCGACGGCGAGGACGAGGACGAGAAGAACGTCACCTCAGCTTTCACGAGCACGAGTC
AACAAGCCAGGTTCTCGGCGCGGTGGAGGAAGGGTATCATCGCGTGCCGGCGGGGCAGCTCGCTGGTGGCGGTGATGGCG
CAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGCTGGACGACGGGCCGGAGGGGGAGGAGCTGGTGGGCGTCGTCGG
TCTCCTGGACGTGCTCCGGGTGCTCCGCCGCCACCTCCTACGCGCACCGCCCGCGCACACTATGGCCGAGTAATCTCGGC
TCCTCCCGGACTGCAAGAAC----------------CTTTATTCAAGTCCTGAAAATCCCACTGTGCGTGAAGTCTCCGA
TGAAAACACCCGTGAATGAAACTTGAACCAAAGC----------------------------------------------
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>chr2D_1_TraesCS2D01G599900
TTTGG---------------------------------------------------------------------------
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-----------------------------------------CAGTGTGTAATAGAAAAAAATGGCTTTATTTGGCCCAAC
TTGGAGGCTCACAGACATGCCTGGTTGAGGTATGGTTCTCAGGGTGGGTTCCCCTTAGCGAATGGTTTTATTTGCGAGAC
CGGCAATTTTCTGGAAAAAAAATGAGAGGCCGTTTGGTTTCAGGCCTAGCAATG---------CCATACAATATTGCCAA
ACTTACATAAGGTTAGTTTTTCGGAATGAGAGCCATAATTTGGCAAGCTTAAGACAATCTTAACACACTTTTTAAGTGTG
TGGGATGTGGGACCCTAGTGTAGCTTG----------------AACCAAACACCCATCTAAGTTGATCAAACTTGCTTAA
GCTTAGGTGTGG-AACCTTAGACAAACTTAGCCTCAAACCAAACTACCCCTAAACTAAGACGAATTTGTCATGTTGGCTA
ACTAAGCTTGCCATCCGTGACGTACACAATTGGCAAGGGGTGATTCTTGAAACAAGTGTGCAAACATAAGAACACATTTT
TT-AGGCTTTTTCACCCATGGGACCTAATTTTAATTTGGCACTGGGTCCCATGTTTGGGAGGTACGGCCCTGGGAGCAAC
TTTTTAATTTTTTTTGCCTGT-TTATTTTAACACACCCGCAAAT------------------------------------
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--------------------------------------CCTATCCTTATGAGCATCTCCGAGAGACTTAGCCGGTATATA
ATCTTGAGATTGACGAAGTCACCACAGACGCCTCGTAGACGAGG--GGAACGTCTTCTCTCACTAAACACGCATCATAGT
AAATTCTGAAATAAATCCAAAAATAACACGAGCACCGGGAGTTAAACGCTAGTGGGCCGTA-------------------
----CCAATCATAGGTTGGTTTGCGTGTTTTTTTTTTTTTTTTGCCTTTTGGAAAGTAGTGCTGCTCCCAGTGCACTTTG
AAGTGACCAGTTTTCTCCCCGGCCGCGAAAAG-AAAACTGACCAGGTTTCAGGGGAGAAA-----GTGAAGGAGCACCAT
CCATCACACACGCTGCGTACGCATGATCGATGTCGTTTCTCGAAACACGA----CACGTCGTGCGTTGTTTGCGTGCGTG
C-TATA-TCTGCGCTCAACATTTTGCGTGCAACTCCGGCCGGAGATCGCTCGGCGCCGTCGGT----GCGTGAGTGCGTA
CATACATGGTGGCGGGGTTTCTGCTGGAGAGTGAGGTGTCCGACCTCTGCATCGGCAAGCCGCCGATCAGGTGGCTGCCG
CCCTCGTCCACCGTGGCCAGCGCCGTCGACGAGCTCGAGGCCGACGGGGGGCCGTGCGGCGCCGTCGCCGTGTGGGACGG
CGAGGCGGGGGCGGCCGTGGCGGGCAGGGTGCGCATGGCCGACGTGCTATTCTTCCTCTGCGCCGACGAAGGCAACAACC
TACAGGCCACGCTCGCCGACCTCCTGGCCGCAGCCGGGGCGCCGCCCGTCCGCCGCGTGGAGCCCGATGCGAGGTTGGTG
GCGCGCACGCGTCCCTCCCTTGGGGCCGCCACGTACATGCACGCTGATCCGCCAGCTCTTTCTTAATGAGGTTAGCTTGT
TTGCTTGTGTGCAGCGTGCTGGAAGCGGTGGACGCGCTGCTGGGCGGCGCGCAGAGCCTCGTGGTGCCCATCCGCGACAA
CCGGCGCCCGGAAACGGCGCAGCTAGAAGCAGAGTCGATGTGCTGGGTCACGGTGGAGGACGTGGCGCGCTTCTTCCTCG
GCTCCGTCGCGCTCTTCTCGCAGATCGCCTTGCGCTCCGTCTCCGACCTCGGCGCCGTCCGCCCGGCCCGCAGCGTGCTC
GCCGTTGCGCCCGGAGACGACACGCTCTCCGCCACCGAGCCGCTCCTTCGCGCGGCCCTGGCGACGCACGCCTCCGTCGC
CGTGGTGTCCGGACGCTGCCTCGTCGGCGAGATCTCGCCGTTGACGCTCTGCTCCTCCCTCGACG---------------
---CGCCCATGTCCTTGATCGACTCTGCCCGCGCCCCGCGAGAAGCCGCCCTCGGGCCCCGCCTCCGCAGCCGCAACCTG
CACGGCGTGCTCGACCTCCTCAACGCCGGCGGCCGCGACCTGCCGTCCCCGTCCTCTTCCTCTTCATCCTCCTCGTCGTG
CGCCTCCTCCTCTTCCTCCTCGTCCGACGGCGAGGACGAGGACGAGAAGAACGTCACCTCAGCTTTCACGAGCACGAGTC
AACAAGCCAGGTTCTCGGCGCGGTGGAGGAAGGGTATCATCGCGTGCCGGCGGGGCAGCTCGCTGGTGGCGGTGATGGCG
CAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGCTGGACGACGGGCCGGAGGGGGAGGAGCTGGTGGGCGTCGTCGG
TCTCCTGGACGTGCTCCGGGTGCTCCGCCGCCACCTCCTACGCGCACCGCCCGCGCACACTATGGCCGAGTAATCTCGGC
TCCTCCCGGACTGCAAGAAC----------------CTTTATTCAAGTCCTGAAAATCCCACTGTGCGTGAAGTCTCCGA
TGAAAACACCCGTGAATGAAACTTGAACCAAAGCAGTTAAGGGTTGTAAAGTGAGGTG-ATTTTCTGGCTAGCT------
--AGTCCTGAGTAAT-TTTAATCCTTTTGAGCCTGCTAGATGGTTGTTAGAGCATCTTGCAATAGTGTTTTTGCGCGTCG
GAGGCTTACCAGAGGCACAAAAATACGGCGCCCAACCCAGCGGTCCCACATGCAGCAGCCCGCCCGCATAAGTCGGCGTC
CCAAATATGCAGCTCCGCAGCCCGCGTGCGTTAAAGTTACAGCTTCGTTTTTGTGCGCGCTCTATTTTACGGTTTCTGCT
GGAGCGCTGCTTTTTTGTCTCTCGCGCGCTAAATAGGCATTTTTTTCCAGCGTGCGGCTTATTAATCGCGTCTGTTGGAG
ATGCTCTTAAGTATTAACATTTAGCTTCCTTACTTTCTGGCAAGCGTTATTTTCAAAACAAAAAACAGATTTCTGGCTAG
CGTTATTTTTTTTAAAGCCCAGAGTATAACAGTTTTGCTAAGTCTCAGTCGATTGAGACTTCGTTATATCTCAGTCGATA
TTGTATTCCTTTTATCTTGCATGAAGATTCGTAAAAGAAAATTATTTTCAGTTTTCCCTTTTACTTTTTATATATCGTGT
CACTTGACTGGCACTTGTCGACTGAGATCTAGCCACGTTTTTATTATAGAAGTTTGTAAAAAGTAGAAATCACCTTA---
-------------------ACATCGAGGTCTTCAAACCACCAAATGACCAATGTCGCCAGTCATGGATGTGTCATTGTCG
CCGCTTTCATACTGGAGCCGGTCTAATCTTATCGATAATAGCCGAAAAGTTTTTGTGCACATGCCCCTAATTAAGTCCCA
AA---ACCGTCGTCGTTGTTAAATCCTTATTTGGTCTAAACTCTTAGCATACTAGTTTATTTCTCTCTTGCTATTGTCTT
AGTATTTCCTTATCTCATAATAATGGTATTCAACGGGTGATTGTTAGCTAATGGGAAATGGAACTGCCGGTTTGGTTCTC
GAAACGGAGCAAAAGGGGG-CAAAAGAGAA
>chrUn_1
TTTGG---------------------------------------------------------------------------
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-----------------------------------------CAGCGTGTACTAGGT--AAATGGCTTTATTTGGCCCAAC
TTGGAGGCCTGCAGACGTGCCTGGATGAGGGATGGTTTGCTAAGTGGGT-CCCCTTATCGAATGGTTTCGTTCGCAAGAC
CGGCAATTTTC---AAAAAACATGAGGGGTTGTTTGGTTTCAGGGTTAGCAATGCCACACTTGCCATACAATGTTGTCAA
ACTTGCATAACCTTAGCTCTTTAAAATGAGAGCCACAAGTTGACAAGCCTAAAAAAATCTTACCATATTTTTTAAATGCA
TGGGATGTAGGACCCTAGTGTGGCTTGCCTAAGATGTGGCTTGAACCAAACATCCACCTAAATTAATCAAACTTGCGTAA
ACTTAGGTGTGACAACCTTAGACAAACTTAGTCTCAAACCAAACAACCTTTTAACTAAGACGAATTTGCCATGTTCACTA
ACTAAATTTGCCATTCGCAACGTACATAATTGGCAAGGGGTGATTCTTGAAACAAGTAAGCAAACATAAGAAAAAAAAA-
TT-AGGCTTTTTCACCCATGGGACCTAATTTTAATTTGGCACAGGGCGCCACGTTTTGGATGTACGGCCCTGGGAGCAAC
ATTTTAACCGTTTTTTGCCTCTTTTTTTTTCTTTTTTAAGAACAACGCTGGCGCTTATATATATAGAGGCATATATTCAT
CCTTATGAATATACACATGCAACCCTATCCCCACTGGCGGAGCTTAAGCAAGGCCG-ATGGGCCATGGCCCGCCCAGTTT
TGGACCTCCACCTCACATTTATAGCCAGACTATTCAGCCCATCAAGCCTGCTGGTAACAATCCCTTGCTGCCAGGCCAAC
TCAGCCCGCCCAGTTTTTCGGAGCAAGCTCCGCCACTGCCTATCCCTATGAGCACTTTCAAAAGACCGAGCCGGCATATA
ATTTTAAGATTGGCGAAGTCACCAGTGACTTCTCGTCGTAGTCAATGGGACGTCTTCG-TCACTGAACTTGCATCGTCGA
AAATCATGAAATAAATCCACGAACAATGTGAGCATCAGGATGAATCCTGATGGGCTAG--GAATACCACTGTCGTTCTAA
CCATCCAACCACATATTGATTTGCCTGTTTTC-----TTTTTTGCTTGTTGGAAAGTAGTGCTCCG---AGTACACTTTG
AACTGAGCAGTTTTCTCCCCGGCCGCGAAAAGAAAAACTGACCAGGTTTCAGGGGAGAAA----AGTGAAGGAGCACCAT
CGATCACACGCGCTGCGTACGCATGATCGATGTCGTTTCTCGAAACACGA----CACGTCGTGTGTTGTTTGCGTGCGTG
CATATA-TCTGCGCTCAACATTTTGCGTGCAGCTCCGGCCGGAGATCACTCGGCGCCGTCGGT----GCGTGGGTGCGTA
CATACATGGTGGCGGGGTTTCTGCTGGAGAGTGAGGTGTCCGACCTCTGCATCGGCAAGCCGCCGATCAGGTGGCTGCCG
CCCTCGTCCACCGTGGCCGGCGCCGTCGCCGAGCTCGAGGCCGACGGGGGGCCGGGCGCCGCCGTCGCCGTGTGGGACGG
CCGGGAGGGGGCGGACGTGGCGGGCAGGGTGCGCATGGCCGACGTGCTCCTCTTCCTCTGCGTCCACGACGGCAGCAGC-
--GAGGCCACGCTCGCTGACCTCCTCGCAGCTGCCGGGGCGCCGCCCGTCCGCCGCGTGGAGCCCGACGCGAGGTTCGTG
GCGCGCACGCGTCCCTCCCTTGGG-CCGCCACGTACATGTCCGCTGATCCGCCAGCTCTTTCTTAATGAGGTTAGCTTGT
TTGCTTGTGGGCAGCGTGCTGGAAGCGGTGGACGCGCTGCTGGGCGGCGCGCAGAACCTCGTGGTGCCCATCCGCGACAA
CCGGCACCGGC---CGGCGCACCTACAAGCAGAGCCGATGTGCTGGGTCACGGCGGAGGACGTGGTGCGCTTCTTCCTCG
GCTCCGTCGCGTTCTTCTCGCAGATCGCCTTGCGCTCCGTCTCCGACCTCGGCGCCGTCCGCCCGGCCCGCAGCGTGCTC
GCCGTTGCGCCCGGAGATGACACGCTCTCCGCCACCGAGCCGCTCCTTCGCGCGGCCCTGGCGACGCACGCCTCAGTCGC
CGTGGTGTCCGGCCGCTGCCTGGTCGGCGAGATCTCGCCGTTGACGCTCTGCTCCTCCCTCGCCGC------------GC
TCTCGCCCATGTCCTTTGTCGACTCTGCCCGCGCCCCGCGAGAAGCCGCCCTCGGGCCCCGCCTCCGCAGCCGCAACCGG
CACGGCGTGCTCGACCTCCTCAACGCGGGCGGCCGCGACCTGCCGTCCCCATCCTCTTCCTCTTCGTCCTCCTCGTCGAG
CGCATCCTCCTCCTCCTCTTCGTCCGACGGCGAGGACGAGGACGAGAAGCGCGTCACCCCAGCTTTCACGAGCACGGGTC
GACAAGCCAAATTCCCGGCGCGGTGGACGAAGGGGGTCATCGCGTGCCGGCGGGGGAGCTCGCTGGTGGCGGTGATGGCG
CAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGCTGGACGACGAGCCGGAGGGGGAGGTGCTGGTGGGCGCCGTCGG
TCTCGTGGACGTGCTCCGGGTGCTCCGCCGCCACCTCCTTCGCGCACCGTCCGCGCACAGTATGGCAGAGTAATCTCGGC
TCCTCCCGGAATGCAAGAACTTC----AGCAACTGTCTTTA-TCAAGTCCTGAAAATCCCACTCTGCGTGAAGTCTCCGA
TG------------AATGAAACTTGAACCAAAGCATTTAAGGGATGTAAAGTGAGGTTTATTTTCTGGCTAGATGGCTGT
TAAGTCCTGAGTACTGCTTAATCCTTTTGAGCAATCTAGATGGCTGCTAAGTG---------------------------
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-------------TTAACGTTATTTTTATTTAA----------------------------AAAAATTCAGATTGAT---
------------------------TATAAAAGTTCA--------------------------------------------
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--------------------------------------------------------TGAGAAGCACAAAACACCTTGAAC
TATAATACTAATAAAAATTACATGCATAGCTTTGGACCATCAAACTACCAAAGTCGGC-----TGGACGTGTCATTGTCC
CCGCTCCAATACTGGAGTTGGTCTGATCTTATCGATAATAGCCGAAAAGTTTTTATGTACATGCCCTTAATTAAGTCCTA
GATTCACGGTCGTCGTTGTTGAATCCTTATTCAGACTAAACATTAGCGTACTA---------------------------
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>chrUn_1
TTTGG---------------------------------------------------------------------------
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-----------------------------------------CAGCGTGTACTAGGT--AAATGGCTTTATTTGGCCCAAC
TTGGAGGCCTGCAGACGTGCCTGGATGAGGGATGGTTTGCTAAGTGGGT-CCCCTTATCGAATGGTTTCGTTCGCAAGAC
CGGCAATTTTC---AAAAAACATGAGGGGTTGTTTGGTTTCAGGGTTAGCAATGCCACACTTGCCATACAATGTTGTCAA
ACTTGCATAACCTTAGCTCTTTAAAATGAGAGCCACAAGTTGACAAGCCTAAAAAAATCTTACCATATTTTTTAAATGCA
TGGGATGTAGGACCCTAGTGTGGCTTGCCTAAGATGTGGCTTGAACCAAACATCCACCTAAATTAATCAAACTTGCGTAA
ACTTAGGTGTGACAACCTTAGACAAACTTAGTCTCAAACCAAACAACCTTTTAACTAAGACGAATTTGCCATGTTCACTA
ACTAAATTTGCCATTCGCAACGTACATAATTGGCAAGGGGTGATTCTTGAAACAAGTAAGCAAACATAAGAAAAAAAAA-
TT-AGGCTTTTTCGCCCATGGGACCTAATTTTAATTTGGCACAGGGCGCCACGTTTTCGATGTACGGCCCTGGGAGCAAC
ATTTTAACTGTTTTTTGCCTCTCTTTTTTTCTTTTTTAAGAACAACGCTGGCGCTTATATATATAGAGGCATATATTCAT
CCTTATGAATATACACATGCAACCCTATCCCCACTGGCGGAGCTTAAGCAAGGCCGAATGGGCCATGGCCCGCCCAGTTT
TGGACCTCCACCTCACATTTATAGCCAGACTATCCAGCCCATCAAGCCTGCTGGTAACAATCCCTTGCTGCCAGGCCAAC
TCAGCCCGCCCAGTTTTTCGGAGCAAGCTCCGCCACTGCCTATCCCTATGAGCACTTTCAAAAGACCAAGCCGGCATATA
ATTTTAAGATTGGCGAAGTCACCAGCGACTTCTCGTCGTAGTCAATGGGACGTCTTCG-TCACTGAACGTGCATCGTCGA
AAATCATGAAATAAATCCACGAACAATGTGAGCATCAGGATGAATCCTGATGGGCTAG--GAATACCACTGTCGTTCTAA
CCATCCAACCACATATTGATTTGCCTGTTTTC-----TTTTTTGCTTGTTGGAAAGTAGTGCTCCG---AGTACACTTTC
AACTGACCAGTTTTCTCCCCGGCCGCGAAAAGAAAAACTGACCAGGTTTCAGGGGAGAAA----AGTGAAGGAGCACCAT
CGATCACACGCGCTGCATACGCATGATCGATGTTGTTTCTCGAAACACATGCACCACGTCGTG-----------------
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>chr2B_1
TTTTCTTTTTTGCTTGTTGGAAAGTAGTGCTCCGAGTACACTTTGAACTGACCAGTTTTCTCCCCGGCCGCGAAAAGAAA
AACTGACCAGGTTTCAGGGGAGAAAAGTGAAGGAGCACCATCGATCACACGCGCTGCGTACGCATGATCGATGTTGTTTC
TCGAAACACATGCACCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGTTTTGTA
TTTTTGCCCCTTAATTTGCAGCTCCGTCGACCACTCAGGCTAGATTTAAGCCACTGCGGCGCTGTCGGTGGTCGCCGTTG
CGGGCATATATGACGGCCAGGCGGGAATGGCCGACGTGCTCGTCTCCCTCTGCGCCGACGACGGTAGCAGCTAGGCCGCG
CTGCAAATTGGTATTGTCCACATGGCATATTTTTTCTATGAAGCGCCGTGGCAAATTTCTGAAGAAGAAGAAAAAAATCA
TATGACAAATTCAAAAACATGATATAGAAAAATCATATGGCAAAATCAAAACATGGCATTTTTTTTATTAGTCAAACATG
ACCTTTTTTTAGAGGAAATTGTCTTGGTTACATGGCCTCTTTGTGTGAGGTAGCATGGGCAAATTTCCGGAAAAAAAATC
ATATGGCAAATTCAAAACATGGCAGAAACATCATATGGCAAATTCAAAAACATGGAAGGTTTTATTTCGTGAAAATTGTA
TTTGGTCACATGGCATATTTTTTGTGTAGTGGCATGGTAAAACTATCAGGCATCAATAAGTTCTTGTTGGAATGATTTTT
AAGCAATTAGTTTGTTTTGACATAGTATCAACTCATGAAGATTTGGATACAAATCTTTTATTTTTCTTGCCAGGGCAAAT
CTTTGTGCTAGGTCTATGGCAAGCTCACATGTGCAAAAATGTTCGCATGGGAAATAATGCTTTAACATGGCAATTTCCTA
GAATGTTTCTTAATATCCACATGTGAAAATAATGTTTTAGACATGGCAAATTCATAGAGTTATCATGGCATATAATGTTT
TAACACAGGTAAATTCTCATATAGGTTTTTTTAGCAAAATTCTCATATAGGTAGCATGGCATTTTGATTTTTTAGACCAT
GGTAATCTAAATTGTTAGATCGTGCCATTTCCATTAACCAGACCAAGGTAGTTTTATTATATGTAGCATGATATTTTTAT
TATTTACACCATGGCAACTTTATTATTTTGGAACATGACAAATTTATTAATCTTGGCATGCCATTTTTATTTCTGAACAC
ACCTTGGTAAATTATTTTATACAAACTATTTTTTATATTTTTATCGACGTGTCATTTTTATGCCTTCTCAAAAGCACAAA
GTTGTTTTTTACACTATTTTTTGCCATGATGTCAAACTTACACACATTTTGCCATTAACATCAGTTTTTTTAGCATCATG
GCTGTTTTTATTTGTGTGCATCATGGCAAATTTATAATATATAGCACGTCAAATTATTTTTATCATGGCATTTTTTAGAT
TTTATAGATACCACAACATTATTTTTGTACTTGTGGCAAATTTATCTACTGTAGCATCACAAATATATGGGAATTGTGAT
TTGTTTCTTGGTTTTTAGATCATGGTAAGTTTGCTAAACTTGCCCCATTTTTGTAAATTTGCTTTTCTGAGCAAATCTAT
GAAAAAAATTATTACCAATAACATGGCATTTTATAGCATGGTATTTTAATATTAATAACATGGCATTTCTTTATTTTTCA
AGAGGATGGCATGTTTCTTATTAAAAGGATGACATTTTTATTATTGAGCGTATGAAATTTTTATTACTAAGTAACATGGC
ATTTTTATTAATAGGATAATATCTTTATTACGGGCGGTCACATGGCAATTGTTTCAAAGTTTTGTTCTTATTTTCAATAA
TGGGGTAGTTGGATGGCATTGTCTAGGTTATTTTATCTAAATTTCATCATGTCAATTTTTTTTTCATTTTCTTGTAATTT
GTGTTTTTTATGTACAACACCTAATCATTTTGAACATGACAGCATTTTAATTATGTGCATCATGGTATTTTTTTACTGTT
ATTGTAGCTTTCTAAAATGATGCCCGGTTTTTAAGTTTTGGCAGCGTGTACTAGGT--AAATGGCTTTATTTGGCCCAAC
TTGGAGGCCTGCAGACGTGCCTGGATGAGGGATGGTTTGCTAAGTGGGT-CCCCTTATCGAATGGTTTCGTTCGCAAGAC
CGGCAATTTTC---AAAAAACATGAGGGGTTGTTTGGTTTCAGGGTTAGCAATGCCACACTTGCCATACAATGTTGTCAA
ACTTGCATAACCTTAGCTCTTTAAAATGAGAGCCACAAGTTGACAAGCCTAAAAAAATCTTACCATATTTTTTAAATGCA
TGGGATGTAGGACCCTAGTGTGGCTTGCCTAAGATGTGGCTTGAACCAAACATCCACCTAAATTAATCAAACTTGCGTAA
ACTTAGGTGTGACAACCTTAGACAAACTTAGTCTCAAACCAAACAACCTTTTAACTAAGACGAATTTGCCATGTTCACTA
ACTAAATTTGCCATTCGCAACGTACATAATTGGCAAGGGGTGATTCTTGAAACAAGTAAGCAAACATAAGAAAAAAAAA-
TTTAGGCTTTTTCGCCCATGGGACCTAATTTTAATTTGGCACAGGGCGCCACATTTTGGATGTACGGCCCTGGGAGCAAC
ATTTTAACTGTTTTTGCC--------------------------------------------------------------
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>chr2A_361
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----------------------CAAACTTAGTCTCAAACCAAATAGCCCCTAAATTAAGATGAATTTGTCATGTTGGCTA
ACTAAACTTGCCATCTGCGACGTACACAATTGGCAAGGGGTGATTCTTGAAACAAGTGTGCAAACATAAGAACACATTTT
TT-AGGCTTTTTCACCCATGGGACCTAATTTTAATTTGGCACAGGGTCTCATGTTTGGGAGGTACAG-CCTGGGAGCAAC
TTTTTAACTGTCTTTTCGTCTGTTTTTTTAACACACCCGCAAAT------------------------------------
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--------------------------------------CCTACCCTTATAAGCATCTTCGAGTGATTTAGTCGGCATATA
ATCTTAT-ATTGACGAAGTCACCACAGACGCCTCGTAGGCGACG--GAAACGTCTTCTTTCACTAAACACGCATCGCGGT
AAATTCTGAAATAAATCCAAGAATAACACAAGCACCAGCATTTAAACGCCAATGGGCCGAGAATACCACTGTTTTTCTAA
CCATCCAATCACCGATTGGTTCGCGTG---TC-----TGTTTTGCCTTTTGAAAAGTAGTGCTGCTCCCAGTACACTTTG
AAGTGACCAGTTTTCTCCCCGGCCGCGAAAAG-AAAACTGACCAGGTTTCAGGGGAGAAAGTGAAGTGAAGGAGTAGCAT
CGATCACACACGCTGCGTACGCATGATCGATGTCGTTTCTCGAAACACGA----CACGTCGTGTGTTGTTTGCGTGCGTG
CATATAATCTGCGCTCAACATTTTGCGTGCAGCTCCGGCCGGAGATCACTCGGCGCCGTCGGTCCGTGCGTGAGTGCGTG
CGTACATGGTGGCGGGGTTTCTGCTGGAGAGCGAGGTGTCCGACCTCTGCATCGGCAAGCCGCCCATCAGGTGGCTGCCG
CCCTCGTCCACCGTGGCCCGCGCCGTCGCCGAGCTCGAGGCCGACGGGGCGCCGGGCGCCGCCGTGGCCGTGTGGGACGG
CCAGGCGGGGGCGGCCGTGGCGGGCAGGCTGCGCATGGCCGACGTGCTCCTCTTCCTCTGCGCCGACGACGGCAGCGGC-
--CAGGCCACGCTCGCCGACCTCCTCGCAGCAGCCGGGGCGCCGCCCGTCCGCCGCGTGGAGCCCGACGCGAGGTTGGTG
GCGCGCACGCGTCCCTCCCTTGGG-CCGGCACGTACATGTCCGCTGATCCGCCAGCTCTTTCTTAATGAGGTTAGCTTGT
TTGCTTGTGTGCAGCGTGCTGGAAGCGGTGGACGCACTGCTGGGCGGCGCGCAGAGCCTCGTGGTGCCCATCCGCGACAA
CCGGCACCGGC---CGGCGCACCTGGAAGCAGAGTCGATGTGCTGGCTCACTGTGGAGGACGTGGTGCGCTTCTTCCTCG
GCTCCGTCGCGCTCTTCTCGCACATCGCCTTGCGCCCCGTCTCCGACCTCGGCGCCGTGCGGCCGGCC---------CTC
GCCGTCGCTCCGGGCCACGACGCGCTCTTCGCCGTCGAGCCGCTCCTTCGCGCTGCCCTGGCGACGCACGCCTCCGTCGC
CGTGGTGTCCGGACGCTGCCTGGTCGGCGAGATCTCGCCGTTGACGCTCTGCTCCTCCCTCGACGCACCCATCGCCGCGC
TCTCGCCCATGTCCTTGGTCGACTCTGCCCGCGCCCCGCGAGAAGCCGCCCTCGGGCCCCGCCTCCGCAGCCGCAACCTG
GACGGCGTGCTCGACCTCCTCAACGCCGGCGGCCGCGACCTGCTGTCCCCGTCCTCTTCCTCTTCGTCCTCCTCGTCGTG
CGCCTCCTCCTCTTCCTCCTCGTCCGACGGCGAGGACGAGGACGAGAAGAACGCCACCTCAGCTTTCACGAGCACGGGTC
GACAAGCCAAATTCTCGGCGCGGTGGACGAAGGGGATCATCGCGTGCCGGCGGGGGAGCTCGCTGGTGGCGGTGATGGCG
CAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGCTGGACGAGGAC---------GAGGAGCTGGTGGGCGTCGTCGG
TCTCGTGGACGTGCTCCGGGTGCTCCGACGCCACCTCCGACGCGCATCGCCGGCGCACAGTATGGCAGAGTAATCTCGGC
TCCTCTCGGAATGCAAGAATTTCACCAAGTAAATGTCTTTATTCAAGTCCTGAAAATCCCACTCTGCGTGAAGTCTCCGA
TGAAAACACC-GTGAATGAAACTCGAACCAAAGC---------------------------------------T------
--AGTCCTGAGTACTGTTTAATCCTTTTGAGCCTGCTAGATCGCTGTTAAGTG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------TTAACATTTAGTTTCCTTACTTTCCGGCTAGCGTTATTTTTCAAAAAGAAAAATTCAGATTTAT---
------------------------TATAACAGTTTTGCTAAGTCTCAGTCGACTGAGACTTAGTTATATCTCAGTCGATA
CTACATTTATTTGATCTTGCATGAAGATTCATAAAAGAAAATTATTTTCAGTTTTCCCTTTTACTTTTTATATATTGTGT
CACTTGACTGGCACTTGTCGACTGAGATCTAGCCACATTTTTATTATAAAAGTTTGCAAAAAGTACAAAACACCTTAAC-
-------------------ACATCGAGGTCTTCGGACCATCAAATGACCAATGTCGTCAGTAATGGACGTGTCATTGTCG
CCGCTTTCATATTGGAGCCGGTCTAATCTTGTTGATAGTAGCCGAAAAGTTTTTATGCACATGCCCCTAATTAAGTCCTA
GA---ACCGTCGTAGTTGCTGAATCCTTATTTGGTCTAAACTCTTAGCATTCTAGTTTATTTCTCTCTTGCTAGTGTCTT
AGTATTTCCTTATCTCGTAATAACGGTATTCAGCGGGTGATTGTTAGCTAATGGGAAATGGACGTGCCGATTTGGTTCTC
AAAACGGAGCAAAAGGGGGGCAAAAGAGAA
>SNPs
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--------------------------------------------S-----S---SSSS----------------------
--------SSS-----S-------S-----S------SS-SSS------S-------S----------SS--S--S----
-----------SSS------S-----S--SS-------------SS--------------------------S---S---
----S-----SS----S-S--SSS-----------S--S---S-----S---S-S-------S--S-S-------S--SS
--------S------------S------------------------------S---S----S--S-----------S---
S----------S-------------------S------------S-----------------------------------
-----S-----------S--------------------------------------------------------------
------------------------------------------S-------------------------------------
-------S-S---------S----S-------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------S----------------S-----
-----S--------------------------------S---S---------------S----------------S-S--
--------------------S---------------S---S--------S---------SS-------------------
-----------S--S----------------SSSSSS-----------------------------------S-------
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-S-------------------------------------------------------------S----------------
-------------------------------S---------------S--------------------------------
--------------------------------------------------------------------------------
------------------S---------S-------------------------S---S---------------------
-S----------------------------------------------SS-------------------S----S--S-S
SS-----------------------S--S--------------------------------------S------------
------------------------S--------------SS---------------------------------------
--------------------------------------------------------------------------------
-----S--S-SSSS-------S-------------------------------------------S--------------
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--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-----------------S--------------------------------------------------------------
-----------------------------------------------------------------S--------------
----------------------------------------------------------------------------S---
S--------SS----------------S------S--------------------S------------------------
----------------------------------------------S---------------------------------
----S------------------------------------------------------S------S-------------
----------S----------------------------------------------------S----------------
----------S------------------------S-------S-------------S--------------S-------
-------------S-----------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-----------S------------S---S-----------SS---S-S----SSSSSSSS--SSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----------------------------S--------S------------------
S-SS---SS---S-----------------S--------------------------------------------S----
------------------------------------S-----------S----------------S---S----------
---------------------------------SS----S----------------S----S-----S------------
------------------------------------------------------S-----------------------S-
S-------------------S-----------------------------S----------------------S------
----------------S------S--------S-----------------------------SS-----S----------
S-----------------------------
>forward_3231
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-----------CAGACATGCCTGGTTGAGGT-------------------------------------------------
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>reverse_4790
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---------------------------------------------------------------------AGGCAACAACC
TACAGGCC------------------------------------------------------------------------
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>forward_4201
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---------------------AATAACACGAGCACCGGGAG---------------------------------------
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>reverse_6097
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----------------ACAAAAATACGGCGCCCAAC--------------------------------------------
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------------------------------
