>input_sequence_50839
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---------ATGGGGAGAAAGGCGCCTCCTTTATCTCCGGCCGGACGGAAGCGCAAAGGTCCATCGCTCCCCTTTCTCT-
-CCCCCTGCAAACGCCGGTCTACCCCCACTCCGGCGCAGACAGCTACCGGCTGGGCGTCCCTCCCGGACGACATAGCCCG
CCAGGTCGCCGCGCTGGTGCTGAAATTCGGCGTCGTGGACTACATTGCCTTCCGCGCCGTCTGCTCCGGATGGCGCACCT
GCGCGCCCACTCCGCGCGACCCCACCCTCCGGATCCGGTCTCTCCGCCCGGTCGGCTGGGTCACGCTCTGTGACGGCGAC
GCCGTCCGCCCCGAC------------------G------------------ACGCCTGCCAGATAACCTTCTTCCACAG
TCAAACGGCGAGGTGCCTCCGCGTCCGCCTGCCCGAGCTCCAGCGCCACAGGATCATTGGCTTCACCGATGGTCTTGTCA
TCCTGCTGCACAAGCGAACCACCGCGGTCCGCGTGCTCAACCCCTTCACAGGCGCCGCGGTTGACTTCCCGTCCCTCGTC
CCCGTGTACCAGGAGCTGATCAAGAACCGCAACTGTGTCCTTCACATGAACGCTGCGGTTTGTAGTAGTGTATCATCCAC
CACCTCCATTGCCGTCGTGGCCTGGTTCCCTTGGTCATCTGTGGTGCTCAGTGCCGATGCAGGCCACCCGAGCTGGGAGG
TCATCCAAACAAACATGTATCTGTCCAACACCTTGCCCTTCCAAGGTCAGCTCTACGGCTTCCTGCAGTCTTCAAGGCAG
ATTGTGCAAGTCTACCCTCCCAAGCCACCCACC---GGTCCTGTTGTTGCTCATGTTCCACAAAAGTTTGGTAACCCGCT
TTTCTGCAAGTACTATCTCGTGGAGTCCGATGGAGACATGCTACTCGTTGTCAAGTCGCCCAAGTTTGTACACCCCGATG
TAGAGGAGTGGCGACGTTACATCATTGCCATCTTCAAGGTGAATATAAGCATCGTCGGCCACCGGGAACTGATTCCCGTA
ACAAGTCTCGGCGACCGGGCATTGTTCGTCTCCTTGGACAGGTGCTTGTCCGTGTCGTCCAAGAACCTTCCGTCCATCAG
CAGCAACTCGATTTACCTCACGGTATCACTCCCGGATCCGGTCGTCGTGCATTGTTTGAGCAGCCGATCGTTCGAGCGGC
CAACGGCGTTGTGTCAGGTACATGACGGAAAGGAGATGATCTGCACATCCGTGCGGCCCTTCACTCTTGCTGATCATCTT
CTCACCTACTGCAATCATCATGAATGGTACGGTTTCTC--AATTC---GCTTCCTACCTCCTCCCCGATTA---------
GCGTTCAGCATGATCACTCTAACTAATGAT---------C-------------CATCCATCCATCCTCTTGCAGGTCAAA
TGGACTGATGTTTCATGAGTACTACTCCATACCTGAGTCTTTTCAAGGGCTGTGGAAGAAAATAAGAACCCAGGATTCCC
AACTGAGGATTTCACGCATGAGAGATTGA---------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr7B_1_TraesCS7B01G257600
CCATCCATCCATCATTCTCAGGAGCTGCTCATACCTGGCCTCAACCGACCAAACCCCACGCGCCCATGACGCATCAGACA
ACACCATAGGGTTCCCAGCCCACGCCAAAACCGAATCCAAGGCAATGGAATCGCGCTGGCTGGCGGCACCACAGCGGTGG
GGAACTGACGCGGCGGCCGCCGCACACGGCCACCACGCGTGGTGGCCTCACGCTTGAGCTGATCCGGGTAAAGATGGGCG
GAGCAGCTTCGGGCGACGGTAGAGAGGACCATCG--------------------------ATGGGCGCCGGAGCGGAGGT
GGCTCCGGAAGACTGTGCGCGTGGCGGCGGCTACGAACCCTAGCGCCGCGGTCGATGGCATCCCTGCCGGCCACGTCCAT
GGATCCGGATTGAGAAGAGAACGGGGAAGAGACGAGGCCACAGAGAGGGAGGAGGGGGCTGGGACGGGGAGAGGAGAACT
GGAGGAGGCGGCGGCATGCTTGGGTCGAGGGGA-----------GACGACTCTGTGTGGAGTTCCTTCCTTCGTAGTCGT
AGGGAAGGAAACGAGACGAAGACGTTTCTCCTCTTGTTTTTTTTTTGTTGTTGTTTCGTTAATAACGCATTTTCACCT--
--GCACAGTAAAATCTACGTGGACACCACCGGCGCTCGCCCTTACCGCGTACAGTACCTTATTGTTTTTGATCGCCAAAA
GAAGAAGAAAACGAAAAAAAAAGGGAGTGCGGGGAGCGCTT-GCCTTTCCCCTTCCCTGC--ATTCGCCGTTCTGGCAGC
GGCGTGATTCCACCCTATTCCGGCGGCGGCCGCCGCCGCTTCGGCAACGCCAGGTTCATATTTCTCC-CCAATTTACTGG
TCTTCACTGTCTAAATAGGCCGCTGGATGTTCCATCCAGATCCAGGCGCCGCTCGGATTCCCCTTCAATCT---ATCAAC
TCCGATTTGGGATCGCAGTAGGAGTCCTCCTGTATATAGCTCCGGCCGACGCGCGAGAGCAACGCATCCGAACAAGCCA-
AGGTGCGGGATGGGGAGAAAGGCGCCTCCTTTATCTCCGGCCGGACGGAAGCGCAAAGGTCCATCGCTCCCCTTTCTCT-
-CCCCCTGCAAACGCCGGTCTACCCCCACTCCGGCGCAGACAGCTACCGGCTGGGCGTCCCTCCCGGACGACATAGCCCG
CCAGGTCGCCGCGCTGGTGCTGAAATTCGGCGTCGTGGACTACATTGCCTTCCGCGCCGTCTGCTCCGGATGGCGCACCT
GCGCGCCCACTCCGCGCGACCCCACCCTCCGGATCCGGTCTCTCCGCCCGGTCGGCTGGGTCACGCTCTGTGACGGCGAC
GCCGTCCGCCCCGAC------------------G------------------ACGCCTGCCAGATAACCTTCTTCCACAG
TCAAACGGCGAGGTGCCTCCGCGTCCGCCTGCCCGAGCTCCAGCGCCACAGGATCATTGGCTTCACCGATGGTCTTGTCA
TCCTGCTGCACAAGCGAACCACCGCGGTCCGCGTGCTCAACCCCTTCACAGGCGCCGCGGTTGACTTCCCGTCCCTCGTC
CCCGTGTACCAGGAGCTGATCAAGAACCGCAACTGTGTCCTTCACATGAACGCTGCGGTTTGTAGTAGTGTATCATCCAC
CACCTCCATTGCCGTCGTGGCCTGGTTCCCTTGGTCATCTGTGGTGCTCAGTGCCGATGCAGGCCACCCGAGCTGGGAGG
TCATCCAAACAAACATGTATCTGTCCAACACCTTGCCCTTCCAAGGTCAGCTCTACGGCTTCCTGCAGTCTTCAAGGCAG
ATTGTGCAAGTCTACCCTCCCAAGCCACCCACC---GGTCCTGTTGTTGCTCATGTTCCACAAAAGTTTGGTAACCCGCT
TTTCTGCAAGTACTATCTCGTGGAGTCCGATGGAGACATGCTACTCGTTGTCAAGTCGCCCAAGTTTGTACACCCCGATG
TAGAGGAGTGGCGACGTTACATCATTGCCATCTTCAAGGTGAATATAAGCATCGTCGGCCACCGGGAACTGATTCCCGTA
ACAAGTCTCGGCGACCGGGCATTGTTCGTCTCCTTGGACAGGTGCTTGTCCGTGTCGTCCAAGAACCTTCCGTCCATCAG
CAGCAACTCGATTTACCTCACGGTATCACTCCCGGATCCGGTCGTCGTGCATTGTTTGAGCAGCCGATCGTTCGAGCGGC
CAACGGCGTTGTGTCAGGTACATGACGGAAAGGAGATGATCTGCACATCCGTGCGGCCCTTCACTCTTGCTGATCATCTT
CTCACCTACTGCAATCATCATGAATGGTACGGTTTCTC--AATTC---GCTTCCTACCTCCTCCCCGATTA---------
GCGTTCAGCATGATCACTCTAACTAATGAT---------C-------------CATCCATCCATCCTCTTGCAGGTCAAA
TGGACTGATGTTTCATGAGTACTACTCCATACCTGAGTCTTTTCAAGGGCTGTGGAAGAAAATAAGAACCCAGGATTCCC
AACTGAGGATTTCACGCATGAGAGATTGAATCAGAT----GATAAGTAGGCATGTGGCACCGAAAAAATAATAGTCCCTC
TGTATTGTAGACTACTCTTTGAAAATGAGAATATTATTTAATTTCT---TTATTCCTAATGCTTTCAATGTAATCAATAT
GATGATGTAACTAGAATTAAGAAAACCTTCTCTCACTTCTTGATGAAGTCAGTTTGTTTGTGAATTAAAAAATGACCAGC
GGTGTCAGTTTATGTCTACCCAAGAGGATGATGAGAAAATTTGAGCTTTTAGTATGCTGTTATGCCAGCTAGGATCTGCT
CGTCCAAGGTGATATTGACATCCCTCTGCTTGGCAGAGTCTGCAGGTTCATTCAGTGTACTTGCTGCTAAGTTTGAATCC
CAATACAGCTTGTTATAGTTTTGTCTTATCTTAAAGAAGGTCGGGATTCTACATTCCTCTGCCTTGATGAATATTGGAAG
GATGTCACTAAACAACATCAAGTAGACCACCAGCAGCAAGGTAATACGCATTCTTGTCATTATAACTTCATGGGTCCTGA
TGCCTTTTGCCATTTGGCTTCCATTGCAAAAGAGTATCATGTGAGGCACTTCTCCTTTTTTGCCCCAAAACTGTTTCCCC
TTTGCTGCATGTTTTTGTTTTCTGGGATGACAGT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AAACTAGTCCTCATCGATTTTCACAACGGAAGATATTGTTCTTGAAATGTAA
TCGTTGTTCTCTTGCTGAGTAAATATGTATTCTTTCATGTCCACGTATTGTTACATATGCATTTTGTAAAGCTCTAGTTA
GGCGGCTGATACAAAATCTCAGAATTTCTAGCGAATTAAGTATTTGGAACAGAAGTTTTTTAATGTGTATTTTACTGACC
ATTCTTGAGCTGAAAAGTGTAATGCCAGGCAACGATACATGAATTATGATCTGATGTTTAGTGATTACACTGGATTGTGG
ATGTGTTTGGTTGGCGACAACAACAGAACTAGGGAACAGTTAATGCTAAACTATTGCTGATCGTGTCTAA
>chrUn_1
CCATCCATCCATCAGTCTCAGGAGCTGCTCATACCTGGCCTCGACCAACCAACCCCCACGCGCCCATGACGCATCAGACA
ACACCGTAGGGTTCCCAGCCCACGCCAAAACCGAATCCAAGGCAATGGAATCGTGGTGGCTGGCGGAGCCACAGTGGTGG
GGAACTGACGCGGCCG----------------CCACGCATGGTGGCCTCACGCTTGAGCTGATCCGGGCAAAGACGGGCG
GAGCAGCTCCGGGCGACAGTGGAGAGGACCATCAATGGGCGACAGTGGAGAGGACCGTCAATGGGCGACAGAGTGGAGGT
GGCTCCGGACGGCTGTGCGCGTGGCGGCGGCTAGGAACCCTAGCATCGCGGTCGATGGCGTCCCTGCCGGCCACCTCCAT
GGATCCGGATTGAGAAGAGAAAGGGGAAGAGACGAGGCCACAGAGAGGG-GGAGGGGGCTGGGATGGGGAA---------
--AGAAGGAGGCGGCGTGCTTGGGTCGAGGAAAGGCGTGGAGTGGACGACTGCGTGTGGAGTTCCTTCGA----------
AGGGAAGGAAACGAGACGAAGACGTTTCTCCTCTTGTTTTTTCT------TTCTTTCATTAATAACGTGGTGAAACACCT
GAGCACAGTAAAATCTACGTGGACACCACCGGCGCTCGCCC---------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5A_670
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------ATCGCAAAGA
GAAGAAGAAAACAAAAAAAAAA-GGAGTGCGGGGAGCGCTT-GCCTTTCTCCTTCCCTGC--ATTCGCCGTTCTGGCAGC
GGCGTGATTCCACCCTATTCCGGCGGCGGCCGCCGCCGCTTCGGCAACGC-AGGTTCATATTCCTCCTCCAATTTACTGG
TCTTTGGTGTCTAAATACGTCGCTGGGTGTTCCATCTAGATCCAGGCGCTACTCGGATTCCCCTTCAATCT---ATCAAC
TCCGATTTGGGATCGCGGTAGGAGCCGTCCTGTATATAGCTCCGGCCGACGCGCGAGAGCAACGCATCCGAACAAGCCA-
AGGTGCGGGATGGGGAGAAAGGCGCCTCCTTTTGCTCCGGCCGGGCGGAAACGCAAAGGTCCGTCGCTCCCCTTTCTCT-
-CCCCCGGCAAACGCCGCTTTATCCCCACTCCGGCGCGGGCAGCCACCGGCTGGGCGTCCCTCCCGGACGACATAGCCCG
CCAGGTCGCCGCGCTGGTGCTGAAATCCGGCGTCGTGGACTACATTGCCTTCCGCGCCGTCTGCTCCGGATGGCGCACCT
GCGCGCCCGCTCCGCGTGACCCCACCCTCCGGATCCCGTCTCTCCGCCCGGTCGGCTGGGTCGCGCTCTGTGACGG----
--------------C------------------G------------------ACGCCTGCCAGATAACCTTCTTCCACAC
TCAAACGGCGAGGTGCCTCCGCGTCCGCCTGCCCGAGCTCCGGCGCCACAGGATCATTGGCTTCACCGATGGTCTTGTCA
TCCTGCTGCACAAGCGAACCACCGCGGTCCGCGTGCTCAACCCCTTCACAGGCGCCGCGGTTGACTTCCCGTCCCTCGTC
CCCGTGTACCAGGAGCTGATCAAGAACCGCAACTGCGTCCTTGGCATGAACGCTGCGGTTTGTACTAGTGTATCATCCAC
CACCTCCATTGCCGTCGTGGCCTGGTTCCCTTGGTCGTCTGTGGTGCTCAGCGCCGATGCAGGCCACCCGAGCTGGGAGG
TCATCCAAACAGACATGTATCTGTCCAACACCTTGCCCTTCCAAGGTCAGCTCTACGGCTTCCTGCAGTCTTCAAGTCTA
CCCTCCCAGTCCCAAG-TCCCAACCCACCCGCC---GGTCCTGTTGTTGCTCATGTTCCACAAAAGTTTGGTAACCCGCC
TTTCTGCAAGTACTATCTCGTGGAGTCCGATGGAGACATGCTACTCGTTGTCAAGTCGCCAAAGTTTGTGCACCCTGATG
TAGAGGTG-----------------------CTTCAAGGTGAAGATAAGCATGAGCGGCCACCATGAACTGATTCCCGTA
AGAAGTCTCGGCGACCGGGCATTGTTCGTCTCCTTGGACAGGTGCTTGTCCGTGTCGTCCAACAACCTTCCGTCCATCAG
CAGCAACTCGATTTACCTCACGGTATCACTCCCGGATCCGGTCGTCGTGCATTGTTTGAGCAGCCGATCGTTCGAGCGGC
CAACGGCGTTGTGTCAGGTACACGATGGAAAGGAGATGGTCTGCCCATCCGTGCGGCCCTTCACTCTTGCTGATCATCTT
CTCACCTACTGCAATCATCATGAATGGTACGGTTTCTC--AATTACTAGCTTCCTACCTCCTCCTCGATTA---------
GTGTTCAGCATGATCACTCTAACTAATGAT---------CTCATTTCGCCATCCATCCATCCATCCTCTTGCAGGTCAAA
TGGACTGATGTTTCATGAGTACTACTTCATACCTGAGTCTTTTCAAGGGCTGTGGAAGAAAATAAGAACCCAGGATTCCC
AAGTGAGGATTTCACGCGTGAGAGATTGAATCAGATATAGGATAAGTAGGCATGCGGCACCGAAGAAATAATAGTCCCTC
TGTATTTTAGACTACTCATTGAAAATGAGAATATTATTTAATTTCT---TTATTCCTAATGCTTCCAATGTAATCAATAT
GATGATGTAACCAGAATTAAGAAAACCTTGTCTCACTTCTTGATGAAGTGAGCTTGTTTGTGAATTAAAAAATGACCAGT
G------GTTTATGTCTACCCAAGGGGATGATGAGAAAATTTGAGCTTTTAGTATGCTGTTATGCCAGCTAGGATCTGCT
CGTCCAAGGTGATATTGGCATCCCTCTGCTTGGCGGAGTCTGCAGGTTCATTCAGTGTACTTGCTGCTAAGTTTGAATCC
CAATACAGCTTGTTATAGTTTTGTCTTATCTTAAAGAAGGTCAGGATTCTACATTCCTCTGCCTTGATGAATATTGGAAG
GATGTCGGTAAACAACATCAAGTAGACCA---GCAGCAAGGTAATACTCATTCTTGTCATTATAACTTCATGGGTCCTGA
TGCCTTTTGCCATTTGGCTTCCATTGCAAAAGAGTATCATGTGAGGCACTTCTCCTTTTTTGCCCCAAAACTGTTTCCCC
TTTGCTGCATGTTTTTGTTTTCTGGGATGACAGAAAACTAGTCCTCATTGATTTTCACAACGGAAGAGATTGTTCTTGAA
ATGTAATCGTTCTTCTCTTGCTGAGTAAATAAAAACTAGTCCTCATTGATTTTCACAACGGAAGAGATTGTTCTTGAAAT
GTAATCGTTGTTCTCTTGCTGAGTAAATAAAAACTAGTCCTCATTGATTTTCACAACGGAAGAGATTGTTCTTGAAATGT
AATCGTTGTTCTCTTGCTGAGTAAATAAAAACTAGTCCTCATTGATTTTCACAACGGAAGAGATTGTTCTTGAAATGTAA
TCGTTGTTCTCTTGCTGAGTAAATATGTATTCTTTCATGTCCACGTATTGTTACATATTGCTGAGTAAATATTGGCATCC
CTCTGCCTGGCAGAGTCTGCAGGTTCATTTAGTGTACTTGCTGCTAAGTTTGAATTTCAATATAGCTTGTTATAGTTTTG
TCTTATCTTAAAGAAGATC-------------------------------------------------------------
----------------------------------------------------------------------
>chr4D_684
AAGAAATAGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------AAAAAAAAA-GGAGTGCGGGGAGTGCTTTGCCTTTCCCTTTCCCTGCCCATTCGCCGTTTTGGCAGC
GGCGTGATTCCACCCTATTCCG---------GCCGCCGCTTCGGCAACGCCAGGTTCATATTCTCCC-CCACTTTACTGG
TCTTCGGTGTCTAACTACGTCGCTGGATGTCCCATCCAGATCCAGGCGCCGCTCGGATTCCCCTTCATCTAGAAATCAAC
TCCGATTTGGGATCGCAGCAGGAGCCGTCCTGTATATAGCTCCGGCCGACGCGCGAGAGCAAAGCATCCGAACAAGCCA-
AGCTGCGGGATGGGGAGAAAGGCGCCTCCTTTCGCTCCGGCCGGACGGAAGCGCAAGGGTCCATCGCTCCCCTTTCTCCC
ACCCCCTGCAAACGCCGGTCTATCCCCACTCCGGCGCGG---------GGCTGGGCGTCCCTCCCGGACGACATAGCCCG
CCAGGTCGCCGCGCTGGTGCTGAAATCCGGCGTCGTGGACTACATTGCCTTCCGCGCCGTCTGCTCCGGATGGCGCACCT
GCGCGCCCACTCCGCGCGACCCCACCCTGCGGATCCGGTCTCTCCGCCCGGTCGGCTGAGTCGCGCTCTGTGACGG----
--------------CGACGCCGTCCGCCCCGACG------------------ACGCCTGCCAGATAACCTTCTTCCACAG
TCAAACGGCGAGGTGCCTCCGCGTCCGCCTGCCCGAGCTCCAGCGCCACAGGATCATTGGCTTCACCGATGGTCTTGTCA
TCCTGCTGCACAAGCGAACCACCGCGGTCCGCGTGCTCAACCCCTTCACGGGCGCCGCGGTCGACTTCCCGTCCCTCGTC
CCCGTGTACCAGCAGCTGATCAAGAACCGCAACTGCGTCCTTGGCATGAACGCTGCGGTTTGTGCTAGTGTATCATCCAC
CACCTCCATTGCCGTCGTGGCCTGGTTCCCTTGGTCGTCTGTGGTGCTCAGCGCCGATGCAGGCCACTCGAGCTGGGAGG
TCATCCAAACAAACATGTATCTCTCCAACACCTTGCCCTTCCAAGGCCAGCTCTATGGCTTCCTGCAGTCTTCAAG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTGAATATAAGCATAAGCGGCCACCATGAACTGATTCCCGTA
ACAAGTCTCGGCGACCGGGCATTGTTCGTCTCCTTGGACAGGTGCTTGTCCGTGTCGGCCAACAACCTTCCGTCCATCAG
CAGCAACTCGATTTACCTCACGGTGTCGCTCCCGGATCCGGTCGTCGTGCATTGTTTGAGCAGCCGATCGTTCGAGCGGC
CAACGGCGTTGTGTCAGGTGCACGACGGAAAGGAGATGATCTGCCCATCCGTGCGGCCCTTCACTCTTGCTGATCATCTT
CTCACCTACTGCAATCGTCATGAATGGTACGGTTTTTCTCAATTC---GCTTCCTACCTCATCCCCGATTA---------
GCGTTCAGCATGATCGCTCTAACTAATGATCTCATTTCGC-------------CATCCATCCATCCTCTTGCAGGTCAAA
TGGACTGATGTTTCATGAGTACTACTCCATACCTGAGTCTTTTCAAGGGCTGTGGAAGAAAATAAGAACCCAGGATTCCC
AAGTGAGGATTTCATGCATGAGAGATTGAAGCAGAT----AATAA-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5D_959
CGAGGCGCCG----------------------------------------------------------------------
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-------------------------------------------------------AGAGCAACGCATCCGAGCAAGCCAG
AGGTGCGGGATGGGGAGAAAGGCGCCTTCTTTTGCTCCGGCCGGACGGAAGCGTAAAGGTCCATCGTTTCCCCTTCTCT-
-CCCCCTGCAAACGCCGGATTTCCCCCGCTCCGGCGCAGGTG---ACCGGCTGGGCATCCCTCCCGGACGACATAGTCCA
CCAAGTCGCCGCGCTGGTGCTGGAATTCGACGTGGTGGACTACATTGCCTTCCGCGCGGTCTGCTCGGGATGGCGCGCCT
GCGCGCCCAGCCCGCGAGACCCCACCCTGCGGATACGATCTCTCCGCCCGGTCGACTGGGTCGCGCTCTGCGACGG----
--------------C------------------GACGCCGTCCGCCCGGATGACGCCTGCCAGATAACCTTCTTCCAGAA
GCGAACGGCCAGGTGCCTCCGCGTCCGCCTGCCCGAGCTCCAGCGCCACAGGATCATTGGCTTCACTGATGGTCTTGTCA
TCCTGCTGCACAAGCGAGCCACCACGATCCGCGTGCTCCACCCCTTCACGCGGGTCGTGGTCGACTTCCCATCCCTCGTC
CCCGTCTACCAGAAGCTGATCCGGAACCGCAACTGCGTGCTCCGCATGAACGCTGCGGTTTGTAGCAGTGTGTCATCCAC
CACTTCCATTGCCGTCGTGGCTTGGTTCCCTTGGTCATCTGTGGTGCTCAGTGCTGATGCAGGCCACTCAAGCTGGGAGG
TCATTCACAAAGACATGTATCTTTCCAATACCTTGCCCTTCCAAGGTCAGCTTTACGGTTTCCTGCAGACTTCAAGGCAG
ATTGTGCAAGTCTACCCTCCAAAACCACTTGGTCCTGGCCCTGTCGTTGCTCATGTTCCAATTAAGTTTGGCAACCCATT
TTTCTGCAGCTTCTATCTCGTGGAGTCCGATGGCCACATGCTACTTGTTGTCAAGTCTATGAACTTGGTGGGCCGTGATG
TGGAGGAGTGGCGACGTTACGTCATTGCGATCTTCAAGGTTGATGTAAGCC---TCGGCCACTGGGAACTGATCCCAGTA
AGCAGTCTTGGCGACCGAGCATTGTTTGTCTCCATGGACAGGTGCCTGTCCGTGAAGGCGAAGAACCTTCCTTCCATCAG
CAGCAACTCAATTTACCTCACTGTGCCACTCCCGGATCCGGTTGTCGTGCATTCCCTGAGCAGCCAGTCATTTGAGCGGC
CAACGACGTTGTGTCAGGTCCACGACGTGAAGGAGAAGATTCGCCCGTCCGTCAGGCCCTTCACCATCGCTGATCATCTT
CTCACCTACTGCAATCATCGTGAATGGTACAACTTCTTAATTAACTTCTACTAC---TACCTTCTCTCTAGCAACAACAT
GCATTCAGCGTGATAACTCTAATTAATGTTCTAATAATTTGCATTTCG---------------TCCTCCTGTAGGGCAAC
TGGACTAATGTTTCATGAGTATTACACTATACCCAAGTCTTATGAAGAGTTGTGGAAGAAAATAAGAGCTCAGGATTCTG
AAGTGAGGATTTCGCGCGTGCAAGATTCAATCAGGAAAGGGAAA---AGGCGTGTCCAACTGAAGAAGGAATAACTACAC
CGTAATTTAGACTGCTCTTTGAAAATGAGAATATTATTTAACAATATTCTTATTCCTAATGCTTTCAATGTAATCA----
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5A_962
CG-----CCG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------AGAGCAACGCATCCGAACAAGCCAG
AGGTGCGGGATGGGGAGAAAGGCGCCTTCTTTTGCTCCGGCCGGCCGGAAGCGTAAAGGCCCATCGTTTCCCCTTCTC--
-CCCCCTGCAAATGCCGGATTTCCCCCGCTCCGGCGCAGGTG---ACCGGCTGGGCATCCCTCCCGGATGACATAGTCCA
CCAACTCGCCGCGCTGGTGCTGGAATTCGACGTGGTGGACTACATTGCCTTCCGCGTGGTCTGCTCGGGGTGGCGCGCCT
GCGCGCCCAGCCCGCGAGACCCCACCCTGCGGATACGATCTCTCCGCCCGGTCCACTGGGTCGCGCTCTGCGACGG----
--------------C------------------GACGCCGTCCGCCCGGATGACGCCTGCCAGATAACCTTCTTCCAGAA
CCGAACGGCCAGGTGCCTCCGCGTCCGCCTGCCCGAGCTCCAGCGCCACAGGATCGTTGGCTTCACTGATGGGCTTGTCA
TCCTGCTGCACAAGCAGAACACCACGATCCGCGTGCTCCACCCCTTCACGCGGGTCGTGGTCGACTTCCCATCCCTCGTC
CCCGTCTACCAGAAGCTGACCAGGAACCGCAACTGCGTGCTCCGCATGAACGCTGCCGTTTGTAGCAGTGTGTCATCCAC
CACTTCCATTGTCGTTGTGGCCTGGTTCCCTTGGTCACCTGTGGTGCTCAGTGCTGATGCGGGCCACTCAAGCTGGGAGG
TCATTCACAAGGACATGTATCTTTCCAATACCTTGCCCTTCCAAGGCCAGCTTTACGGTTTCCTGCAGACTTCAAGGCAG
ATTGTGCAAGTCTACCCTCCAAAACTACTCGGCCCTGGCCCTGTCGTTGCTCATGTTCCAATTAAGTTTGGCAACCCATT
TTTCTGCAGCTACTACCTTGTGGAGTCCGATGGCCACATGCTACTTGTTGTCAAGTCTATGAACTTGGTGGGTCGTGATG
TGGAGGAGTGGCGACGTTATGTCATTGTGATCTTCAAGGTTGATGTAAGCC---TTGGCCACTGGGAACTGATTCCAGTA
AGCAGTCTTGGCGACCGGGCATTGTTTGTATCCATGGACAGGTGCCTGTCCGTGAAGGCGAAGAACCTTCCTTCCATCAG
CAGCAACTCAATTTACCTCACTGTGCCACTCCCGGATCCGGTCGTCATGCATTCCCTGAGCAGCCAGTCATTTGAGTGGC
CAACGACGTTGTGTCAGGTCCACGACGTGAAGGAGAAGATTCACCCGTCCGTCCGGCCCTTCACCATCGCTGATCATCTT
CTCACCTACTGCAATCATCGTGAATGGTACAACTTCTTAATTAACTTCTACTACTACTACCTTCTCTCTAGCAACAACAT
GCATTCAGCGTGATAACTCTAATTAATGATCTAATAATTTGCATTTC----------------TCCTCCTGTAGGGCAAC
TGGACTAATGTTTCATGAGTATTACACTATACCCAAGTCTTATGAAGAGTTGTGGAAGAAAATAAGAGCTCAGGATTCTG
AAGTGAGGATTTCGCGCGTGCAAGATTCAATCAGGAAAGGGAAA---AGGAGTGTCGAACTGAAGAAGGAATAAATCCAC
CGTAATTTAGACTGCTCTTTGGAAATGAGAATATTATTTAACAATATTCTTATTCCTAATGCTTTCAATGTAATCA----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
--------------S---------------------------S---S-----S---------------------------
-----S-----------------------------------------------S-S----------SS------S-----
--------------S-SSSSSSSSSSSSSSSS------S-----------------------------S-----S-----
--------S--------S--S------------S---------------------------------S-S---S------
---------S-S---------------------S----------SS-------------S--------------S-----
---------------------S---------------------------S--------------S-----SSSSSSSSSS
SS--S---S------S--------------SS-------------------SS---------------SSSSSSSSSSSS
------------------------------------------S-SSSSSS--S----S---------SSS-SSS--SS--
-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--S-
------------S---------S---------------------------------------------------------
--------------------------------------------------------------S-----------------
-----SS----------S-S------------------------------------------------------------
------------------------S-S-----------------------------------------------------
--------------------------------SS----------------------------------------------
---------------------------------------S----S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-------------SSSS
SSSSSSSSSSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S------S-------------------------------------------------
------------------------------------------------------------S--------S-----S----
--------------------S-------S-----------------------SS--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-------------------------------------------------------------S---------------
------S-------------------------------------------------------------------------
-----------S-----------------S-------------------S--S--------------------------S
-SSSSSS-----------------S-------------------------------------------------------
-----------------S----------------S---------------------------------------------
------------------------------------------S-------------------------------------
------SS---------------------SSS---------------S--------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S------------------S------------------
----------------------------------------------------------SSS-SSSSS--SSS-SSSS-SS
SS-S--SSSSSSS-SSSSS---SS-SSS-SSSSSSSSSS-SSSS-SSSSSS---S--SSS--SS-SS-S--S--S-SSSS
SS-SS-SSSSSSS--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------CCCTTACCGCGTACAGTACC----------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_1996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CGATG
TAGAGGAGTGGCGAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_1981
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TACTCGTTGTCAAGTCGCCC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3696
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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