>input_sequence_50825
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--------------------ATGCGGCGAGACGCGGCCGTCGCGCCCGCGGCGGTCGTGACCTCGCCGCAGATAGCGGCC
GGCGGGGCGGAAACGGGGAATGCCGGGCCGGTGGTCATCGACATTGACTCGGCGCCAGCGA------CGGCGGCCATCGA
CATCGACCTCAACGCGGGGGGCGCGACCCGCGGCGTGGCGTGCCGGATCTGCCACCTCAGTCCCGAGGGCGGCGACGGGC
CCGCGGCGGCGCCTGGGTCGGAGGTGATCCGGCTTGGCTGCTGCTGCAAGGAGGAGCTCGGCCACGCGCACCGACAATGC
GCCGAGGCGTGGTTCCGGATCAAGGGCGATAGGTAAGACCTCC----CTGGCTCGCTCTATCCTCTGCTGCATCGTGCTG
CTCGCTTGTTTCCAACGCGGCACTTGTTGTTGCCGAAGTGTATGCTAGCTGCTTGCTGTACTAATTCCTCGCGGAATGCC
GTACAAGCGCACTGGGCGTGTAGCTCCTGCCTCCTAGGATTTGCTG------TTTATAAATGTCAGTGGTCTTGAAGTTA
GGAGTAT---------------AGTGCTTGTTCTGAAATCTGAATCGCTACAGGGTCAAAAGTCTAGTATATTGTATGGG
AAGGCTTCAGAGTTCATAGGGCAACACGAACATTTATC-CTTTTAGCCACTTAGCCAAAGTTGTTACAAAAAG-------
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-------------------GAGAATGTAGCGATCTTGCTTCTTCGATACGGCAAAGTTTTAGCGTCTTAGGTTTGGCCAA
GCTTCACTCGCTGTTGCTTTTTGAAATGACGACTTAGGTTCAAATGGACCTGCGGAAAATGTACCAAGGTGTTGCTTGTT
AGCCACCTCAAATATAGAATCCTTTTTTTTTT------------GGAAGGATTGTTGTCCTGAATGAAGCAAAGGACTAA
ATTCGTTCCTTCTGGATGCTGGCCGGGATTACGCTTTTCACCCTTTCGTGTTGGTGTTTCGTGACTGTCTAAGCCTTTAT
GTCACTCTCTGACATGTGAGTGGCTTCCCTTTGGCGTTGGCAATATGAGATATTTTTATCAGATAAACCCAATCGT-CTT
TTGCTCTTGGCTGGGTCAAATCAACCAAAAT-ATCCATAGGCGAACCGAGCCATTTTCG-TTAATTCTGTTAGCATTTT-
CTTAGCAATTAACCAACTACCAGGGTCTCTGCAGTTATTCAAATTCTCATGCTTTAACAATCTTGTATCAATTTGTCCTG
TGATCTCTCTGAAACTTGCATCAAGTGGCTAAGAAATGCAAAACTTTAATTACTACACAGGCGCTGTGAAATTTGTGGTT
CAGAGGCCAAAAACATTACTGGCGTGGAAGTGAAAAAATTCATGGAGGAATGGCATGGGCGAAGAATGGCAACTACCGGG
GCTATGGTAGAGAGGGAAAGCACTTGCTGGAGGCGGCAGCCATTTTGCAACTTCTTGCTAGCTTGCTTACTGATTGCTTT
CATGCTTCCCTGGTTTTTCCGTGTAAATATATTGTGA-------------------------------------------
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>chr3B_1_TraesCS3B01G315100
TGGCCCTTCCTGTCCAAAAATTCAGAG---AATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCTCTTTCTGGCG--------------------------------------------------GCCGGGAACAGCGCGCC
CTCCTGCTGCCC----ACCT---------------------GGAAGAGGCCCCCGCCCCCACGCGCGCTCGAAGCTCCTG
-------------------------------------------------CTGGCCGCCGCGGTGCCG------------C
CCCCGCGCTCGCTGCTGCTGGCCGT-------------------------------------------------------
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--------------------------CGC-ACCCTCGCGGCCTCGCCTAAGCTGCTGCTTGCTGCCGGCCCGGGGCGCCG
CTAGGGTTGTCTTTTCTCCCGTGGACGAGTGGATGGAGCAAGGCGAGGGTGTGGCGGCTTGGACGAGACGAGATCGTGGG
ACAGATCAAGCGAGCCTGCGAGGCTGTGTGTGCGCG--------TGTGGGCTGGTGAGGTTGGTTTGGGCCGGCCTGATA
AGGTGTCCAGGATAAATCACAGCCCAACAAA-CGTTTGACGATTATTC-TAGCGATCAGACAAATTAGATCGATGTATAT
ACGTATACCTAGTAA-AAAATTACGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCGCCCTACCGCGTCCTCCGCCTGTG
GCTGTGTGGTTGTACCTAGGTCCACCATGTATTGAGGATCTTTTACCTCTCGACTGTAACTCTTTCATTATGGAATAAAA
CTCTCTTTTCCTCGAAAAAAAAGCAAAAAAAGAGCATCAGCACTCCTGAGTCCTGACCACGTCGGCAACACAGCCACCAC
AGGTTGTCCGGCCGGATCGACGGACGCTGTCGTATCGTACGGAGCTGTTGCCGCGCTGGTGCTTGTACGGGCATACCGTG
CCGCGCCGGCAGATAGGCCGTCATGAGCGATGAACTGA------------------------------------------
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--------------------------TGTCACGCGCGTCGTGTGTAGGCCGGCTCGACCCAACTCCCTCCCGCGTCCATA
GCGACCCACCCAAACCGTCCCGCCGCACGCACCCCGTATTATCATACCGCCTCCTGTTCCCGCCGCAGCCCCCGCGACCG
ACAGGTTCGCCCCGGGAGCGATGCGGCGAGACGCGGCCGTCGCGCCCGCGGCGGTCGTGACCTCGCCGCAGATAGCGGCC
GGCGGGGCGGAAACGGGGAATGCCGGGCCGGTGGTCATCGACATTGACTCGGCGCCAGCGA------CGGCGGCCATCGA
CATCGACCTCAACGCGGGGGGCGCGACCCGCGGCGTGGCGTGCCGGATCTGCCACCTCAGTCCCGAGGGCGGCGACGGGC
CCGCGGCGGCGCCTGGGTCGGAGGTGATCCGGCTTGGCTGCTGCTGCAAGGAGGAGCTCGGCCACGCGCACCGACAATGC
GCCGAGGCGTGGTTCCGGATCAAGGGCGATAGGTAAGACCTCC----CTGGCTCGCTCTATCCTCTGCTGCATCGTGCTG
CTCGCTTGTTTCCAACGCGGCACTTGTTGTTGCCGAAGTGTATGCTAGCTGCTTGCTGTACTAATTCCTCGCGGAATGCC
GTACAAGCGCACTGGGCGTGTAGCTCCTGCCTCCTAGGATTTGCTG------TTTATAAATGTCAGTGGTCTTGAAGTTA
GGAGTAT---------------AGTGCTTGTTCTGAAATCTGAATCGCTACAGGGTCAAAAGTCTAGTATATTGTATGGG
AAGGCTTCAGAGTTCATAGGGCAACACGAACATTTATC-CTTTTAGCCACTTAGCCAAAGTTGTTACAAAAAG-------
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-------------------GAGAATGTAGCGATCTTGCTTCTTCGATACGGCAAAGTTTTAGCGTCTTAGGTTTGGCCAA
GCTTCACTCGCTGTTGCTTTTTGAAATGACGACTTAGGTTCAAATGGACCTGCGGAAAATGTACCAAGGTGTTGCTTGTT
AGCCACCTCAAATATAGAATCCTTTTTTTTTT------------GGAAGGATTGTTGTCCTGAATGAAGCAAAGGACTAA
ATTCGTTCCTTCTGGATGCTGGCCGGGATTACGCTTTTCACCCTTTCGTGTTGGTGTTTCGTGACTGTCTAAGCCTTTAT
GTCACTCTCTGACATGTGAGTGGCTTCCCTTTGGCGTTGGCAATATGAGATATTTTTATCAGATAAACCCAATCGT-CTT
TTGCTCTTGGCTGGGTCAAATCAACCAAAAT-ATCCATAGGCGAACCGAGCCATTTTCG-TTAATTCTGTTAGCATTTT-
CTTAGCAATTAACCAACTACCAGGGTCTCTGCAGTTATTCAAATTCTCATGCTTTAACAATCTTGTATCAATTTGTCCTG
TGATCTCTCTGAAACTTGCATCAAGTGGCTAAGAAATGCAAAACTTTAATTACTACACAGGCGCTGTGAAATTTGTGGTT
CAGAGGCCAAAAACATTACTGGCGTGGAAGTGAAAAAATTCATGGAGGAATGGCATGGGCGAAGAATGGCAACTACCGGG
GCTATGGTAGAGAGGGAAAGCACTTGCTGGAGGCGGCAGCCATTTTGCAACTTCTTGCTAGCTTGCTTACTGATTGCTTT
CATGCTTCCCTGGTTTTTCCGTGTAAATATATTGTGAGTTATGCTGCTGGGACTGGGTCATGTGGAATCACACGAATTGC
ACAGAATTTATAGGCAGAATCACAACACAGTTCCTCTTTCTCTTTTCCT---TCGAAATTGTCCATCTGGGTATTTGTCC
TCTTACATTCATCACTTTAAAATCCAAATACCCTTGTTTGATAATAAATGTTTATTTGAGATTCCAACATAATAAAATAT
ACACTGAATCAGAGAGGCCTAAGGGCATCTCCAACGGCAACCCGCAAAAATCCTCCCGCATCTGTCCGCGGACAGGGGGG
ACCAGTCTGCGGGCACGAATGCGGGAGGCAACCATCCAACCTTAGTCGCATACATCCGGCCTTCCGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCATGCAACACTAGTTAAA
ATTGAAAAAAGTTCAATTATTTTACATCCCAACATTGTTGTCCCCCTTCACCGCCCATTGATGCTCAGTTAGATCTTCCT
TGAGGTGCTTGTGAGTTGGTCAATGCCGAATATGTTGATGCATTTGAAAAAATTCCTCAAATGTGATCGGATTCTGGTCC
GGAAGTTGGATAGGATCATCCAAGTTCTCAAATTCCAGATCTGCGGCAGCATCGTCACCCTCATCCTCGATGATCATGTT
GTGCACGATCACACAATATGTCATCACCTTCCACAAGGTCTTCAGATCCCATTGTTTTGCAGGTCCACGAACAACTGCAA
>chr7A_1
TGGCCCTTCCTGTCCAAAAATTCAGAG---AATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCTCTTTCTGGCG--------------------------------------------------GCCGGGAACAGCGCGCC
CTCCTGCTGCCC----ACCT---------------------GGAAGAGGCCCCCGCCCCCACGCGCGCTCGAAGCTCCTG
-------------------------------------------------CTGGCCGCCGCGGTGCCG------------C
CCCCGCGCTCGCTGCTGCTGGCCGT-------------------------------------------------------
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--------------------------CGC-ACCCTCGCGGCCTCGCCTAAGCTGCTGCTTGCTGCCGGCCCGGGGCGCCG
CTAGGGTTGTCTTTTCTCCCGTGGACGAGTGGATGGAGCAAGGCGAGGGTGTGGCGGCTTGGACGAGACGAGATCGTGGG
ACAGATCGAGCGAGCCTGCGAGGCTGTGTGTGCGCG--------TGTGGGCTGGTGAGGTTGGTTTGGGCCGGCCTGATA
AGGTGTCCAGGATAAATCACAGCCCAACAAA-CGTTTGACGGTTATTC-TAGCGATCAGACAAATCAGATCGATGTATAT
ACGTATACCTAGTAA-AAAATTACGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCGCCCTACCGTGTCCTCCGCCTGTG
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>chr7A_1
TGGACCTTCCTGCCCTAAAATTCAGAG---AATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCTCTTTCTGGCG--------------------------------------------------GCCGGGAACAGCGCGCC
CTCCTGCTGACCGTCGACCT---------------------GGAAGAGGCCCCCGCCCCCACGCGCGCTCGAAGCTCCTG
CTGCCCGCCTGGAAGAGGCCCCCGCCCTCACGCGCGCTCGAAGCTCCTGCTGGCCGCCGCGGTGCCG------------C
CCTCGCGCTCGTTGCTGCTGGCCGT-------------------------------------------------------
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--------------------------CAC-CCCCTCTCAGCCTCGCCTAAGCTGCTACTTGCTGCCGCCCCGGCACGCCG
CTAGGGTTGTCTTTTCTCCCATGGACGAGTGGATGGAGCGAGGCGAGGGCGTGGCGGCTTGGACGAGACGAGACCGTGGG
ACGGATCGAGCGAGGCTACGAGGCTATGTGTGCATG--------TGTGGGCTGGTGAGGTTGGTTTGGGCCGGACTGATA
AGGTGTCCACGATAAATCACAACCCAACAAAACGTTTGACGATTATTC-TAGCGATCAGACAAATCAGATCGATGTGTAT
ACGTATACCTAGTAA-AAAATTACGAAATATCAAGGTAGGGTGAGCGCCCCACCTCGCCCTACCGCGTCCTCCGCCT---
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>chr6B_1
TGGCCCTTCCTGTCCTAAAATTCAAAG---AATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCTCTTTCTGGCG--------------------------------------------------GCCGGGAACAGCGTGCC
CTCTTGCTGCCC----ACCT---------------------GGAAGAGGCCCCCGCCCCCACGTGCGCTCGAAGCTCCTG
-------------------------------------------------CTGGCCGCTGA--TGCCG------------C
CCCCGCGCTCGCTGCTGCTGGTCGT-------------------------------------------------------
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--------------------------CGC-CCCCTCGCGGCCTCGCCTAAGCTGCCGCTTGCTGCCGGCCCGGGGCGCCG
CTAGGGTTGTCTTTTCTCCCGTGGACGAGTGGATGGAGCAAGGCGAGGGTGTGGCGGCTTGGACGAGACGAGATCGTGGG
ACAGATCGAGCGAGGCTGCGAGGCTGTGTGTGCGCA--------TGTGGGCTGGTGAGGTTGGTTTGGGCCGGCCTGATA
AGGTGTCCACGATAAATCATAGCCCAGCAAA-CATTTGACGATTATTC-TAGCGATCAGACAAAACAGATCGATGTATAT
ACGTATACCTAGCAA-AAAATTACGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCGCCCTACCGCGTCCTCCGCGTGTG
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>chr5B_1
TGGCCCTTCCTATCCTAAAATTCAGAGAAAAATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCGCTTTCTGGCAGCCAGAAACTGGCCCTCACACAGTCACGCGTGCTTCGACTGGCCGCCGGCACCGGGAACGGCGCGCC
CTCCTACTGACTGTCGACCTCATGCAAGCTCGTGGCCACCAGGAGGTGGCCCCCGCCCCCACGCGCGCTAGGATCTCCTG
-------------------------------------------------CTGGCCGCCGCGGCGCCG------------A
CCCCGCGCTCGATGCTGCTGGTCGT-------------------------------------------------------
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--------------------------CGATCCC------CTCGTGGCCTCGCTCCTGCTTGCTGCCGCCCAGGCGCACCG
CTAGGGTTGTCTTTTCTCTCGTGGACGACTAGATCGAGCC-----AGGGTGTGGAGGCTTGGACGA--------------
CTGGATCCATCGATTGAGCGAGGCTGTACGTGCGCC--------CGTGGGCTGGTGAGGTTGCTTAGGGCCGGCCCAATA
AGGTGTCCATGTTATATCACATCCCAACAAAATGTTTGACGGTTATTATTAGCGATCAGATGAATC-AATCGATGTATAT
ACGTATACCTAGTAA-AAAATTCCGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCGACCTACTATGTCCTCCGCCTGTG
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>chr1D_1
TGGCCCTTCCTATCCTAAAATTTAGAGAAAAATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCACTTTCTGGCAGCCGGAAACTGGCCCTCACACAGTCACGCGTGCTCCGGCTGGCCGCCGGCGCCGGGAACGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCGATCCCCTCGCGCTCGCGGCCTCGCTGCTGCTTGCTGCCGCCCAGGCGCGCCG
CTAGGGTTGTCTTTTCTCTCGTGGATGACTAGATCGAGCC-----AGGGCGTGGAGCCTTGGACG--------------G
CTGGATCGATCGATTAAGCGAGGCTGTACGTGTGCCTGTCAGCCTGTGGGATGGTGAGGTTGGTTAGGGCCGGCCCAATA
AGGTGTCCGTGTTATATCACAGCCCAACAAAACGTTTGACGGTTATTATTAGCGATCAGATGAATC-GATCGATGTATAT
ACGTATACCTAGTAA-AAATTTCCGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCGCCCTACCGTGTCCTCCGCCTGTG
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>chr5D_1
TGGCCCTTCCTATCCTAAAATTTAGAGAAAAATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCACTTTCTGGCAGCCGGAAACTGGCCCTCACACAGTCACGCGTGCTCCGACTGGCCGCCGGCGCTGGGAACGGCGCGCC
CTCCTGCTGACCGTCGACCTCGCGCAAGCTCGTAGCCACCAGGAAGTGGCCCCCGCCCCCACACGCGCTAGGAGCTCCTG
-------------------------------------------------CTGGCTGCCGCGGCGCCGCCACGGCGCCACC
CCCCGTGCTCGGTGCTGCTGGCTGT-------------------------------------------------------
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--------------------------CGATCCCCTCGCGCTCGCGACCTCGCTGCTGCTTGCTGCCGCCCAGGCGCGCCG
CTAGGGTTGTCTTTTCTCTCGTGGATGACTAGATCGAGCC-----AGGGCGTGGAGGCTTGGACG--------------G
CTGGATCGATCGATTGAGCGAGGCTGTACGTGCGCCTGTTAGCCTGTGGGATGGTGAGGTTGGTTAGGGCCGGCCCAATA
AGGTGTCCGTGTTATATCACAGCCCAACAAAACGTTTGACGGTTATTATTAGCGATCAGATGAATC-GATCGATGTATAT
ACGTATACCTAGTAA-AAAATTCCGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCGCCCTACCGTGTCCTCCGCCTGTG
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>chr4A_1
TGGCCCTTCCTATCCTAAAATTCAGAGAAAAATACCTATGCCCTTCTTCTTTGCCATTCCTTTCCCCTTCCTGTCCATCT
TCACTTTCTGGCAGCCGGAAACTGGCCCTCACACAATCACGCGTGCTCCGGCTGGCTGCCAGCGCCGGGAACGGCACGCC
CTCCTGCTGACCGTCGACCTCGCGCAAGCTCGTGGCCACCAGGAAGTGGCCCCTTCCCCCACGCGCGCTAGGATATCCTG
-------------------------------------------------CTGGCCGCCGCGGCGCCG------------A
CCCCGCGCTCGGTGCTGCTGGCCGT-------------------------------------------------------
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--------------------------CGATCCCCTCGCGGCCTCGCTCC----------TGCTGCCGCCCAGGCGCGCCG
CTAGGGTTGTCTTTTCTCTCGTGGACGACTAGATCGAGCC-----AGGGCGTGGAGGCTTGGACGA--------------
CTGGATTGATCAATTGAGCGAGGCTGTACGTGCGCC--------TGTGGGCTGGTAAGGTTGGTTA-GGCCGGCCCAATA
AGGTGTCCATGTTATATCCCAGCCCAACAAAATGTTTGACGGTTATTATTAGCGATCAGATGAATC-CATCGATGTATAT
ACGTATACCTAGTAAAAAAATTCCGAAAAATCAAGGTAGGGCGAGCGCCCCACCTCACCCTACCGTGTCCTCCGCCTGTG
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>chr3B_568
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-------------------------------------------------------------------------------G
GCTGTGTGGTTGTACCTAGGTCCACCATGTATTGAGGATCTTTTACCTCTCGACTGTAACTCTTTCATTATGGAATAAAA
CTCTCTTTTCCTCTAAAAAAC----------GAGCATCAACACTCCTGAGTCCTGACCACGTCGGCAACACAGCCACCAC
AGGTTGTTCGGCCGGATCGACGGACGCTGTCATATCGTACGGAGTTGTTGCCGCGCTGGTGCTTGTACGGGCAT------
CCGAGCCGGCAGATAGGCCATGATGAGCGATGAACTAA------------------------------------------
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--------------------------TGACACACGCATCATGTGTAGGCCGGCTCGACCCAACTCCCTCCCGCGTCCATA
GCGACCCACCCAAACCATCCCGCCGCACGCAACCCATATTATCATACCGCCTCATGTTCCCGTCGTAGCCCCCGCGACCG
ACAGGTTCGCCCCGGGAGCGATGCGGCGAGACGCGGCCGTCGTGCCCGCGGCGGTCGTGACCTCGCAGCAGATAGCGGCC
GGCGGGGCGGAAATGGGGAATGTCGGGCCGGTGGTCATCGACATTGACTCGGCGCCGGCGA------CGGTGGCCATCGA
CATCGACCTCAACACGGGGGGCGCGACCCGCGACGTGGCGTGCCGGATCTGCCACCTCAGTCCCGAGGGCAGCAATGGGC
CCGCGGCGGCACCTGGGTCGGAGGTGATCCGGCTTGGCTGCTACTGCAAGGAGGAGCTCGGCCACGCGCACCGACAATGC
GCCAAGGCATGGTTCCAGAACAAGG-------------------------------------------------------
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>chr3D_681
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--------------------------------AGCATCAGCACTCGTGAGTCCTGACCACGTCGGCAACACAGCCGCCGC
AGGTTGTCCAGCCGGATCGACGGACGCTGTCGTATCATACGGAGCTGTTGCCGCCCTGGTGCTTGTACGGGCATAGCGTG
CCGAGCCGGCAGATAGGCCGTGATGAGTGGTGAGCTGA------------------------------------------
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--------------------------TGACCT-CGCGTCGTGTGCAGGCCGGCTCGACCCAACTCCCTCC-GCGTCCATA
GCGACCCACCCAAACCGTCCCGCCGCACGCACCCCGTATTATCATACCGCCTCCTGTTCCCGCCGCAGCCCCCGCGACCG
ACAGGTTCACCCCGAGAGCGATGCGGCGAGACGCGGCCGTCGCCCCCGCGGCGGTCGTGACCTCGCCGCAGATCGCGGCC
GGCGGGACAGAAATGGGGAATGCCGAGGCGGTGGCCATCGAAGTCGACTCGGCGCCAGCGCCAGCGTCGGCGGCCATCGA
CATCGACCTCGAAGCGGGGGGCGCGTCCCACGGCGTGGCGTGCCGGATCTGCCACCTCAGCCCCGAGGGCGGCGACGG--
----------GCCTGGGTCGGAGGTGATCCGGCTCGCCTGCTGCTGCAAGGAGGAGCTCGGCCACGCGCACCGACAATGC
GCCGAGGCGTGGTTCCGGATCAAGGGCGATAGGTAAGACCTCCCTCCCTGGCTCGCTCTATCCTCTGCTGCATCGTGCTG
CTCGCTTCTTTCCAACGCGGTATGAGTTGTCGCCGAAGTGTATGCTAGCTGCTTGTTG---TAATTCCTCGCAGAATGCC
GTACAAGCGCACTGGGCGTGTGGCTTCTCCCTCCTAGGCCAGGAGTTGCCGTTTTATAAATGTGAATGATCTTGACGTTA
GCAGACTAGAAGTCAGGAATACAGTGCTCGTTCTGAAATCTGAACGGCTATAGGGTCAAAG-TCTATATTATATAG-GGG
AAAGCTTCAGAGTTCATAGGGCAACACGAACAGTTATCCTG-TTAGCCACTTAGCCAAAGTTGCTACAAAATG-------
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-------------------GAGAATGTCGCGATCTTGCGTCTTTGATACGGCAAAGTTTTAGCGTCTTAGGTTTGGCCAA
GCTTCACTTGCTGTTGCTTTTTGAAATGACGATTTAGGTTGGAATGGACCTTCGGAAAATGTATGG-AGTGTTGCTTGGT
GGCCACCTTA-ATATAGAATCTCTTGTTTTTTTT---------TGGAAGGGTTATTGTCCTGAATGAAGCAAAGTACTAA
ATTCGTTCCTTCTGGATCCTGGCTGGGATTATGCTTTTCACCCTCTTGTATG------TCGTGACTATCTAAGCCTTTAT
GTCACTCTC-GAGATGTGAGTGGCTTCCCTTTGGCATTGGCGATATGAGATATTTTTATCAGATAAACCCAATCGTTCTT
TTGCTCTTGGCTGGGTCAAATCAACCAAAAT-ATCCATAGGCGAACCAAACTATCTTCG-TTAATTCAGTTAGCATTTT-
CTTAGCAACTAACCAACTACCAGGGTCTCTGCAGTTATTCAAATTCTCATGCTTTAACAATCTTGTATCAATTTGTCCTG
TGATCTCTCTGAAACTTGCATCAAGTGGCTAAGAAATGCAAAACTTTAATTACTACACAGGCGCTGTGAAATTTGTGGTT
CAGAGGCCAAAAACATTACTGGCCTGGAAGTGAAAAAATTCATGGAGGAATGGCATGGGCGAAGAATGGCAACTACCGGG
GCTATGGTAGAGAGGGAAAGCACTTGCTAGCTTCTTG-------------CTTCTTGCTAGCTTGCTTACTGATTGCTTT
CATGCTTCCCTGGTTTTTCCGTGTAAATATATTGTGAGTTATGCTGCTGGAACTGGGTCATGTGGAATCACACGAATTGT
ACAGAATTTATAGGCAGAATCACAACACAGTTCCTCAAGTTTTTTTTT---CTCAAAATTGTCCATCTGGGTATTTGTCC
TCTTACACTCATTAC-TTAAAATCCAAATACCCCTGTTTGGTAATAAATGTTGATTTGAGATTCTAAAATATACAT----
---CTGAATCAAAGAGGCCTAAGTGGC-----------------------------------------------------
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>chr3A_681
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--------------------------------AGCATCGGCACTCCAGAGTCCTGACAACGTCGGCAACACAGCCACCAC
AGGTTGTCCGGCCGGATCGACGGACGC----------------------------CTGGTGCTTGTACGGGCATACCGTG
CCGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGACACGCGCGTCGTGTGCAGGCCGGCTCGACCCAACTCCCTCCCGCGTCCATA
GCGACCCACCCAAACTGTCCCGCCGCACGCACCCCGTATTATCATACCGCCTCCTGTTCCCGCCGCAGCCCCCGCGACCG
ACAGCCTCGCCCCGAGAGCGATGCGGCGAGACGCGGCCGTCGCGCCCGCGGCGGTCGTGACCTCGCCGCAGATCGCGGCC
GGCGGGGCGGAAACAGAGAATGCCGAGGCGGTGGCTATCGAAGTCGACTCGGCGCCAGCGCCAGCGTCGGCGGCCATCGA
CGTCGACCTCGAAGCGGGGGGCGCGTCCCACGGCGTGGCGTGCCGGATCTGCCACCTCATCCCCGAGGGTGGCGACGGGC
CCGCGGCGGCGCCTGGGTCGGAGGTGATCCGGCTCGGCTGCTGCTGCAAGGAGGAGCTCGGCCACGCGCACCGACAATGC
GCCGAGGCGTGGTTCCGGATCAAGGGCGATAGGTAAGACCTCC----CTGGCTCGCTCTATCCTCTGCTGCATCGTGCTG
CTCGCTTGTTTCCGACGCGGCACTTGTTGCTGCCGTAGTGTATGCTAGCTGCTTGCTG---TAATTCCTCGCAGAATGCC
GTACAGGCGCACTGGGCGTGTGGCTTCTCCCTCCCAGGCCAGGAGTTGCCGTTTTATAAATGTGAATGATCTTGAAGTTA
GCAGACTAGAAGTCAGGAATACAGTGCTCGTTCTGAAATCTGAATGGCTATAGGGTCAAAATTCTATGTTATAGAG-GGG
AAAGCTTCAGAGTTCATAGGGCAACACGAACAGTTATCGCTATTAGCCACTTAGCCAAAGTTGCTACTCCCTCCGTTCCG
AATTACTTGTCGCATGTATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCTGCGACAAGTAGTTTGGAA
CGGAGGGAGTACCAGAGAAGAGAATGTAGCGATCTTGCTTCTTTGATACGGCAAAGTTTCAGCGTCTTAGGTTTGGCCAA
GCTTCACTCGCTGTTGCTTTTTGAAATGACGATTTAGGTTGGAGTGGACGTTCGGAAAATGTCTGG-GGTGTTGCTTGGT
AGCCACCTCA-GTATAGAATCTCTTGTGTTTTTTGTGTGTGTGTGGAAGGGTTATTGTCCTGAATGAAGCAAAGGACTAA
ATTCGTTCCTTCTGGATGCTGGCTGGGATTATGCTTTTCACCCTCTTGTATG------TCGTGACTATCTAAGCCTTTAT
GTCACTCTC-GACATGTGAGTGGCTTCCCTTTGGCATTGACGATATGAGATATTTTTATCAGATAAACCCAATTG-TCTT
TTTCTCTTGGCTGGGTCAAATCAACCAAAAAAATCCGTAGGCGAACCAAACCTTTTACATTTAATTCAGTTAGCATTTTT
CTTAGCAACTAGCCAACTACCAGGGTCTCTGCAGTTATTCAAACTCTCATGCTTTAACAATCTTGTATCAATTTGTCCTG
TGATCTCTCTGAAACTTGCATCAAGTGGCTAAGAAATGCAAAACTCTAATTACTACACAGGCGCTGTGAAATTTGTGGTT
CAGAGGCCAAAAACATTACTGGCGTGGAAGTGAAAAAATTCATGGAGGAGTGGCATGGGCGAAGAATGGCAACCACCGGG
GCTATGGTAGAGAGGGAAAGCACTTGCTGGCGGCGGCAGCCGTTTTGCAACTTCTTGCTAGCTTGCTTACTGATTGCTTT
CATGCTTCCCTGGTTTTTCCGTGTAAATATATTGTGAGTTATGCTGCTGGAACTGGGTCATGTGGAATCACACGAATTGT
ACAGAATTTATAGGCAGAATCACAACACAGTTCCTCATGGTTTTTTTTTTCCTCAAAATTGTCCATCTGGGTATTTGTCC
TCTTACATTCATTAC-TTAAAATCCAAATACCCCTGTTTGATAATAAATGTTGATTTGAGATTCTAAAATATACAT----
---CTGAATCAAAGAGGCCTAAGTGGC-----------------------------------------------------
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>SNPs
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-------S------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------SSSSSSSSSSS-------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------SSS-----------S-------
---------------------S---S--S---------SSSS-SSS-----------------S-S--S-----------
-S--SS----------------------S----------------S----S----------S----SSS---S-SSS---
--S-----------------------------S--------S---------------------S-------S--------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------S-------SS---------S-----------SSSS-----------S-
----------S----------SS--S------------------------S--S--------------------------
-----------------------S-------S------------S-S--S-SSSSSSS--------S-------------
---------S-------------------------S-----S--------------------------------------
-----------------------------------------------S-S-----------------S------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S----------S--------------------------------------
--------------------------------------------------S----------------------------S
------------------------------------S-SS-S----SS------S-------------------------
------------S--S-----------------S------------------S-----------S--S---SSS-SSSSS
SSS--------S-----------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_648
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--------------------------------------------------------------------CGAGATCGTGGG
ACAGATCA------------------------------------------------------------------------
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>reverse_2730
--------------------------------------------------------------------------------
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---------TGACATGTGAGTGGCTTCCC---------------------------------------------------
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>forward_2119
--------------------------------------------------------------------------------
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-------------------GTAGCTCCTGCCTCCTAGGA-----------------------------------------
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>reverse_4130
--------------------------------------------------------------------------------
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-------------------------------------------------CATCGTCACCCTCATCCTCG-----------
--------------------------------------------------------------------------------
