>input_sequence_50788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ATGGTTGCGCACAAGGCGGCCTCGTGGCTGCCCGTGGACTTCCGGCTGCCGGCGGTGCCGCAGGCGGCGCTGGG
CATACTGGCGTTCGAGGCGGGGGCGGCCATGTCCAAGCTGCTCTCGCTGCACCGCTCGCTCTCGGAGCAGGAGGTCTCCC
GGCTGCGCTCCGACGCCATGCGCTCGCCGGGGGTGGCCTACCTCAACTCCACCGACCAGGCGTTCCTCCTCCGCCTCGCC
TGCGCCGAGCTGGTGCTGTCGCTCGACGCCGCCGCGGCCGCCGTCGCGCGCCTCGGCCTGCGCTGCGGCATCGACTTCGC
CGGGGTGTACGCGAGCATCAAGGCTGGCTCGCACGACGCGCGCCTCGACCTGCTCGCCGCCAAGGGGCTCAAGGTCAAGG
CCAAGAAGATGGAGCGCCTCGTGGCGGCCACGTCCAAGCTCTGCTCCGAGATGGAGGCGCTCGACGAGCTGGAGTCCGCC
GAGCGGAAGCTCACCGTCCGCGGCTGGAGCCGTCTCAGCGGGCCGATACCGATGAAGCTCGCGGACCCGCCGCTGGCCGG
CGATTCGATGGGCGCCGAGTCTCTCAAGCAGGAGATCAAGACGCAGCTGCTCAAGGTGCGGCGGCTCAAGGAGGAGTCCC
TGTGGAGCCAGAGCTACGAGAAGGCCGTGGGCCTCATGGCGCGCGCCGCGTGCGCCGTGTTCGTCCGCATCTGCGCCGTC
TTCGGCCAGTTCGTGCCGGGGCTTCCGCCGCCGATGCCGTCCACCTCCGCCGACAGCGTCCAGACCAGGCTGTCGAAGCT
GCTGATGAGCCCGCGGACTGGGAAGACAAAGGCATCGTCGGGGCCGATCACGCGGCGGGAGCGGGAGGGGGCGGGGGCGC
CGTCCCGGGTGCACCCGCCGATGCAGCAGCTGAGCAGTTCGTGTCCAATCATCGGCCAGAGGCCGCTGTCGGGGCAGAAG
GGCGGCGTAGACTGGCGCAAGCTCCTGGACCCGCCGGCCAGCACGGTGGGCGGCGCGGGGCTGGACCAGCAGTACGCGAA
CGTGATCGTGTCGGCGGAGGAGCTGCTGCAGATGGAGGCGGAGGGGCGGCAGGAGGAGGCGAACGCGGAGCGGGCGGAGA
TGTACGAGATGCTGCCCGGGAAGCTCCGGGCGGCGGTGCGGTCGAAGCTGCGCGACTGGTGGCGGGACCCGGGGCCGCTG
GACGCCGGGCTGGCGGAGGGGTGGAAGGAGGCGGTGGAGCGCATCATGGCGTGGCTGGGCCCGATGGCGCGCGACACGGT
GCAGTGGCAGTCGGAGCGGAACATGGACCGGACGCGGCGGTTCGACGGCGGCACGCGCGTGTACGCGCTCCAGACGCTGC
GGTGGGCGGACAAGGACAAGGCGGAGGCGGCGATCGTGGAGGTGCTCGTCGCGCTGAGCTGCGTCTGCTGGTACGAGGAG
CGGCGGCGCGGCTCCGTGCGCGTGAGCTGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3B_1_TraesCS3B01G394500
CTCTTTGCATGTTGGATATGGGCGATATTGTCA--AAATATTACAGCCATGTCCATGAACCTTGCTTCATCGACGACGAG
AACATGATCAACAC-----GCGTCCGGCCGCCCGCCCGGCCGGCGGGACGGCTAAATCGGATTTCTTATATCGGAGTAAG
GGGAACTCAAAATGGACGTGG---CATGCTAGAAACGATCCTACTTGGAAAATGTCTCGGTAATTTCGCAGGAAAAGATC
AATTCCCGGGCACCCCAGATATATTA-TTACCCTTAATAATTTCCTTGGCGAGAAACAAGACCGGCACAACCCAGTAGAT
CCCGATCGAGT----CCGTTAATGGTTTGCCCGGCCGTAACCTCGGACCGGGCCAGAGCC-----AAAGCCAGTTTCGGC
ATAGAATAACCGGGGGCGACGTGCCCCCACCCCGGAATAATGATAAGCTAGCATGGCCCGGGGCACCCCGAGTCCGAAAT
CTGGCAGGCGCCGCAACAGACGTTCGCTCCGTCGTGTAGGTCGCGCCTACCATTTCGCCAAGGCATTCCCACGCGCGCGG
CGACCGTGTC--------CTCCTCCTCTCCTCGGCTCCGCTCGCCACGCACGCAGCGGCAGCTACTTAATCCTCGCACCA
TCGCCATCCCCACGTCTAATTGCCCGCGCGAACGCCAAGCCTGGCTTAACTCCCGATTAGCTAGCTATAACCGAGAAGAG
ACCACCGGCGGCCGTA-GTATATAAGAAAGTTCGTGAGTTGTGACGACCACACCAACCATCCCAGCCTAGCCCGTACCAG
CAAACCGCGTCGACGGGCTGGTACTGCTGCTGCTACTACTACGGGAAGGCCGGCGCCATCGCCGAGGACGCCCAGCTCGG
CGAATCATTCCGTCCATGGCTTGATTGTCTGCCCGTATAACAGCAAAGCGATCCAAGA--------------CACGGTTG
CGAGAAAGGTACCGACAGGTCGTGCTGTTGATTCATTAC---TAGGTGGGAGGGAGCAAAGCGAAGGGAATACCATCGAT
CGGCCGATGGTTGCGCACAAGGCGGCCTCGTGGCTGCCCGTGGACTTCCGGCTGCCGGCGGTGCCGCAGGCGGCGCTGGG
CATACTGGCGTTCGAGGCGGGGGCGGCCATGTCCAAGCTGCTCTCGCTGCACCGCTCGCTCTCGGAGCAGGAGGTCTCCC
GGCTGCGCTCCGACGCCATGCGCTCGCCGGGGGTGGCCTACCTCAACTCCACCGACCAGGCGTTCCTCCTCCGCCTCGCC
TGCGCCGAGCTGGTGCTGTCGCTCGACGCCGCCGCGGCCGCCGTCGCGCGCCTCGGCCTGCGCTGCGGCATCGACTTCGC
CGGGGTGTACGCGAGCATCAAGGCTGGCTCGCACGACGCGCGCCTCGACCTGCTCGCCGCCAAGGGGCTCAAGGTCAAGG
CCAAGAAGATGGAGCGCCTCGTGGCGGCCACGTCCAAGCTCTGCTCCGAGATGGAGGCGCTCGACGAGCTGGAGTCCGCC
GAGCGGAAGCTCACCGTCCGCGGCTGGAGCCGTCTCAGCGGGCCGATACCGATGAAGCTCGCGGACCCGCCGCTGGCCGG
CGATTCGATGGGCGCCGAGTCTCTCAAGCAGGAGATCAAGACGCAGCTGCTCAAGGTGCGGCGGCTCAAGGAGGAGTCCC
TGTGGAGCCAGAGCTACGAGAAGGCCGTGGGCCTCATGGCGCGCGCCGCGTGCGCCGTGTTCGTCCGCATCTGCGCCGTC
TTCGGCCAGTTCGTGCCGGGGCTTCCGCCGCCGATGCCGTCCACCTCCGCCGACAGCGTCCAGACCAGGCTGTCGAAGCT
GCTGATGAGCCCGCGGACTGGGAAGACAAAGGCATCGTCGGGGCCGATCACGCGGCGGGAGCGGGAGGGGGCGGGGGCGC
CGTCCCGGGTGCACCCGCCGATGCAGCAGCTGAGCAGTTCGTGTCCAATCATCGGCCAGAGGCCGCTGTCGGGGCAGAAG
GGCGGCGTAGACTGGCGCAAGCTCCTGGACCCGCCGGCCAGCACGGTGGGCGGCGCGGGGCTGGACCAGCAGTACGCGAA
CGTGATCGTGTCGGCGGAGGAGCTGCTGCAGATGGAGGCGGAGGGGCGGCAGGAGGAGGCGAACGCGGAGCGGGCGGAGA
TGTACGAGATGCTGCCCGGGAAGCTCCGGGCGGCGGTGCGGTCGAAGCTGCGCGACTGGTGGCGGGACCCGGGGCCGCTG
GACGCCGGGCTGGCGGAGGGGTGGAAGGAGGCGGTGGAGCGCATCATGGCGTGGCTGGGCCCGATGGCGCGCGACACGGT
GCAGTGGCAGTCGGAGCGGAACATGGACCGGACGCGGCGGTTCGACGGCGGCACGCGCGTGTACGCGCTCCAGACGCTGC
GGTGGGCGGACAAGGACAAGGCGGAGGCGGCGATCGTGGAGGTGCTCGTCGCGCTGAGCTGCGTCTGCTGGTACGAGGAG
CGGCGGCGCGGCTCCGTGCGCGTGAGCTGATCGCCCTCGGCCCACCCGCCGCCCACGGAGGCCATTCAACGACG--GCGC
CATGGCATGGCGAGC---ACACGCCTTGTCCAAAGCCCATTCTTTTCT-TTTCTTCCTTCTTTGGTTCGTTTGTCAAAGC
A-TTGATTTGAAGAGTTGAATTTTTTGGAGGGGTTGGTGTTAGATCATCAGGGGGTAGTGGCCACGCGTTAGTAGCAGCT
ATAGTGGATTGTAGCAGCAGTAAA------TCGTTCTGTAGTTTGAAAATTTGGAGGGAGAAAGAAAAAGCCAAGGTCCA
GTGGT---TGGCCACTTCACTGTCAATGGCGTGAGGCT------GGCATGACAGGCCGGTCTCACGCCGGTGACAGCGAG
CGTCCGGTGTATAAGTTTGTCTGATTTGTACGTACAATGAATA--CACGATTGATTCTTTGAAATTTTGCGGGGAATTGT
TCAAGCACGCACGCAGGAAATCCTTGCCGGCACGGTTCTCCTGTCCTTTACAGG-ATGGTGGCGAAGTCGTAGGCGCTCA
GCTACCGCCGTTGAACACATTGATACTTATCTGACTTGTATTCTACC---------CGCGGTGAATGGCTTATGACTGCG
CCACAAGTAAAATTTCTACACGATAGCTAGCTATGTGTAAGCTGACCAAATTTGCCACTTGGGTAAGTAAATTTGGCCGG
AGGAGAAACAATCAGAGGAGGAAAAAAGCTGGAGGAAGAAGCGTTGAATCTTTATTTAATCTAATGATCCAGAGACGACT
ACATGCATCATTTTCATGCAGAGGACAGGGAAAACCCTTCTTTTTGAAGAAAAAAAAATCTAATGGTCCAGAAAATCGAC
TTTACCCAAAATAATTTTTCATGCGACTTATGTATAGCCGGTCAAATTTACATGGGAGTGGCTAGGCTTTAGGCCCTGTT
TGGTTAAGTCCTAGGGCTTTTTTTATCCCAACTTATAAGTCTCAAGTCCATAAAAAGTCCCTACTGTTTGGTACCTGGGA
TTTATAAGACCCTATAAGACCATA
>chr3D_1
CTCTTTGCATGTTGGATATGGACGATATATTTGTCAAATATCACAGCCATGTCCATGAACCTTGCTTCATCGACGACGAG
AGCATGATCAACAC-----GCGTCCCGCCGG----CCGGACGGCCGGACGGGTAAATCAAATTTCTTATATCGCAA----
GGGAACTCAAAACGGACGTGG---CATGCTAGAAACGATCCTACTTGGAAAATGTCTCGGTAATTTCGGAGGAAAAGATC
AATTCCCGGGCACCCCAGATATATTA-TTACCCTTAATAATTTCCTGGGCGAGGAACAAGACCGGCACAG-CCAGTAGAT
CCCGATCGAGT----CCGTTAATGGTTTACCCAGCCGTAACCTCGGACCGAGCCAAAGCC-------AGCCAGTTTCGGC
ATAGAATAACCGGGGGCGACGTGCCCCCACCCCGGAATAATGATAATCTAGCATAGCCCGGGGCATCCCGAGTCCGAAAT
CTGGCAGGCGCCGCAACAGACGTTCGCTCCGTCGTGTAGGTCGCGCCTACCATTTCGCCAGGGCATTCCCACGCGCCCGG
CGACCGTGTCTCCCTCCTCTCCTCCTCTCCTCGGCTCCGCTCGCCACGCACGCTGCGGCAGCTACTTAACCCTCGCACCA
TCGCCATCCCCACATCTAATTGCCCGCGCGAACGCCAAGCCTGGCTTAACTT------------------CCGAGCACCG
GCAG--------CCGCAGTATATAAGAAAGTTCGTGAGTTGTGACGACCACACCAACCAA----------CCCGTACCAG
C-AACCGCGTCGACGGGCTGGTACTGCTCCTCCTACTATTACAGGAAGGCCGGCGCCATCGCCGAGGACGCCCAGCTCGG
CGAATCATTCCGTCCATGGCTTGATTGTCTGCCCGTATAACAGCAAAGCGATCCAAGGTTCCTAGCCAGCTCCACGGTCG
CGAGAAAGGTACCGACAGGTCGTGCTGTTGATTCATTAC---TAGGTGGGAGGGAGCGAAGCAAAGGGCATACCATCGAC
CGACCGATGGTTGCGCACAAGGCGGCCTCGTGGCTGCCCGTGGACTTCCGGCTGCCGGCGGTGCCGCAGGCGGCGCTGGG
CATACTGGCGTTCGAGGCGGGGGCGGCCATGTCCAAGCTGCTCTCGCTGCACCGCTCGCTCTCGGAGCAGGAGGTCTCCC
GGCTGCGCTCCGACGCCATGCGCTCGCCGGGGGTGGCCTACCTCAACTCCACCGACCAGGCGTTCCTCCTCCGGCTGGCG
TGCGCCGAGCTGGTGCTGTCGCTCGACGCCGCGGCAGCCGCCGTCGCGCGCCTCGGCCTGCGCTGCGGCATCGACTTCGC
CGGGGTGTACGCGAGCATCAAGGCCGGCGCGCACGACGCGCGCCTCGACCTGCTCGCCGCCAAGGGGCTCAAGGTCAAGG
CCAAGAAGATGGAGCGCCTCGTGGCCGCCACGTCCAAGCTGTGCTCCGAGATGGAGGCGCTCGACGAGCTCGAGTCCGCC
GAGCGGAAGCTCACCGTCCGCGGCTGGAGTCGCCTCAGCGGGCCGATACCGCAGAAGCTCGCGGACCCGCCGCAGGCCGG
CGACTCGATGGGCGCCGACTCGCTCAAGCAGGAGATCAAGACGCAGCTGCTCAAGGTGCGGCGGCTCAAGGAGGAGTCCC
TGTGGAGCCAGAGCTACGAGAAGGCCGTGGGCCTCATGGCGCGCGCTGCCTGCGCCGTGTTTGTCCGCATCTGCGCCGTC
TTCGGCCAGTTCGTGCCGGGGCTTCCGCCGCCGATGCCGTCCACCTCCGCCGAAAGCGTCCAGACCAGGCTGTCCAAGCT
GCTGATGAGCCCGCGGACGGGGAAGACAAAGGCGTCGTCGGGGCCGATCACGCGGCGGGAGCGGGAGGGGGCGGGGGCGC
CGTCCCGGGTGCACCCGCCGATGCAGCAGCTGAGCAGCTCGTGCCCGATCATCGGCCAGAGGCCGCTGTCGGGGCAGAAG
GGCGGCGTGGACTGGCGCAAGCTTCTGGACCCGCCGGCCAGCACGGTGGGCGGCGCGGGGCTGGACCAGCAGTACGCGAA
CGTGATCGTGTCGGCGGAGGAGCTGCTGCAGATGGAGGCGGAGGGGCGGCAGGAGGAGGCGAACGCGGAGCGGGCGGAGA
TGTACGAGATGCTGCCGGGGAAGCTCCGCGCGGCGGTGCGGTCGAAGCTGCGCGACTGGTGGCGGGACCCGGGGCCGCTG
GACGCCGGGCTGGCGGAGGGGTGGAAGGAGGCGGTGGAGCGGATCATGGCGTGGCTGGGCCCGATGGCGCGCGACACCGT
GCAGTGGCAGTCGGAGCGGAACATGGACCGGACGCGGCGGTTCGACGGCGGCACGCGCGTGTACGCGCTGCAGACGCTGC
GGTGGGCGGACAAGGACAAGGCGGAGGCGGCGATCGTGGAGGTGCTCGTCGCGCTGAGCTGCGTCTGCTGGTACGAGGAG
CGGCGGCGCGGCTCCGTGCGCGTCAGCTGATCGCCGTCGGAAG---------CCG---------TTCAACGACGGCGC--
CATGGCATGGCA--C---ACACACCTTGTCCAAAGCCCATTCTTTTCT-TGTCTTCCTTCTTTGGTTCGTTTGTCAAAGC
AATTGATTTGAAGAGTTGAATTTTTTGGAGGGGTTGGTGTTAGATCGTCAGGGGTTAGTGGCCACGCGTTAGTAGCAGCT
ATAGTGGACTGTAGCAGCAGT-AA------TCGTTCTGTAGTTTGAAAATTTGGAGGGAGAAAGAA---GCCACGGTCCA
GTGGTCGTTGGTTACTTCACTGTCAATGGCGTGAGGCT------GGCATGACAGGCCGGTCTCACGCCGGTGACAGCGAG
CGTCCGGTGTATAAGTTTGTCTGATTTGTACGTACAATGAATA--CACGATTGATTCTTTGAAATTTTGTGGGGAGTTGT
TCAAGCACGCACGCGGGAAATCCTTGCCGGCACGGTACTCTTGTCCTTTACAGGGATGGTGGCAAAGTCGTAGGCGCCCA
GCTACCGCCGTTGAACACATTGATACCCGTCTGACTTGTACCCACGCATGACTCCACGCGGTGAATGATTCACGAGTGTG
CCACAAGTAAAATTTCT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3A_1
CTCTTTACATGTTGGATATGGGC-------TTGTCAAATATCACAGCCATGTCCATGAACCTTGCTTCATCGACGACGAG
AACATGATCAACACAACACGCGTCCGGCCGG----CCGGCCGGCGGGACGGCTGAACCAGATTTCTTATACCGGAA----
GGGAACTCCAAGATGTCATACTGCCATACTAGAAACGATCCTACTTGGAAAATGTCTCGGTAATTTCGCAGGAAAGGATC
AATTCCCGGGCGCCCCAGATATATATTTTACCCTTAATAATTTCCTCGGCGAGGAACGAGACCTGCACAA-CCAGCAGAT
CCCGATCCAGTCCGTCCGTTAATGGTTTACCCAGCCGTAACCTCGGACCGAGCCAGAGGCAAACTAAAGCCAGTTTCGGC
ATAGAATAA--------------CCCCCACCCCGGAATAATGATAAGCTAGCATGGCCCG----------AGTCCGAAAT
CTGGCAGGCG------------TTCGCTCCGTCGTGCAGGTCGCGCCTACCATTTCGCCCAGGCATTCCCACGCGCCCGG
CGACCGTGTCTCCCTCCTC-----CTCTCCTCGGCTCCGCTCGCCACGCACGCTGCGGCAGCTACTTAACCCTCGCACCA
TCGCCATCCCCACATCTTATTGCCCGCGCG---------CCTGGCTTAACTT------------------CCGAGCAGAG
ACCACCGGCGGCCCGCGGTATATAACAAAGTTCGTGAGCTGTGACGACCACACAAACCATCCCAGCCTAGCCCGTACCCG
C-AACCGCGTCGACGGGCTGGCACTGCTGCTGCTGCTGCTACGGGACGGCCGGCGCCACCGCCGAGGACGCCCAGCTCGG
CGAATCATTCCGTCCATGGCTTGATTGTCCGCCCGTACAACAGCGAAGCGAT-------------CCAGCTCCACGGTCG
CGAGAAAGGTACCGACAGGCCGTGCCGCTGATTCATTACTACTAGGTGGGAGGGAGCGAGGCAAGGAGCATACCGTCGAC
CGACCGATGGTTGCGCACAAGGCGGCCTCGTGGCTGCCCGTGGACTTCCGGCTGCCGGCGGTGCCGCAGGCGGCGCTGGG
CATACTGGCGTTCGAGGCGGGCGCGGCCATGTCCAAGCTGCTCTCGCTGCACCGCTCGCTCTCGGAGCAGGAGGTCTCCC
GGCTGCGCTCCGACGCCATGCGCTCGCCGGGCGTGGCCTACCTCAACTCCACCGACCAGGCGTTCCTCCTCCGGCTGGCG
TGCGCCGAGCTGGTCCTGTCGCTCGACGCCGCGGCGGCCGCCGTCGCGCGCCTCGGCCTGCGCTGCGGCATCGACTTCGC
CGGGGTGTACGCGAGTGTCAAGGCCGGCGCGCACGACGCGCGCCTCGACCTGCTCGCCGCCAAGGGGCTCAAGGTCAAGG
CCAAGAAGATGGAGCGCCTCGTGGCGGCCACGTCCAAGCTCTGCTCCGAGATGGAGGCGCTCGACGAGCTCGAGTCCGCC
GAGCGGAAGCTCACCGTCCGCGGCTGGAGCCGCCTCAGCGGGCCGATTCCGATGAAGCTCGCGGACCCGCCGCAGGCCGG
CGACTCGATGGGCGCCGAGTCGCTCAAGCAGGAGATCAAGACGCAGCTGCTCAAGGTGCGGCGGCTCAAGGAGGAGTCCC
TGTGGAGCCAGAGCTACGAGAAGGCCGTGGGACTCATGGCGCGCGCCGCGTGCGCCGTGTTCGTCCGCATCTGCGCCGTC
TTCGGCCAGTTCGTGCCGGGGCTCCCGCCGCCGATGCCGTCCACCTCCGCCGACAGCGTCCAGACCAGGCTGTCCAAGCT
GCTGATGAGCCCGCGGACGGGGAAGACAAAGGCGTCGTCGGGGCCGATCACGCGGCGGGAGCGGGAGGGGGCGGGGGCGC
CGTCCCGTGTCCACCCGCCGATGCAGCAGCTGAGCAGCTCGTGCCCGATCATCGGCCAGAGACCGCTGCCCGGGCAGAAG
GGCGGCGTGGACTGGCGCAAGCTCCTGGACCCGCCGGGCAGCACGGTGGGCGGCGCGGGGCTGGACCAGCAGTACGCGAA
CGTGATCGTGTCGGCGGAGGAGCTGCTGCAGATGGAGGCTGAGGGGCGGCAGGAGGAGGCGAACGCGGAGCGGGCGGAGA
TGTACGAGATGCTGCCGGGGAAGCTCCGCGCGGCGGTGCGGTCGAAGCTGCGCGACTGGTGGCGGGACCCGGGGCCGCTG
GACGCCGGGCTGGCGGAGGGGTGGAAGGAGGCGGTGGAGCGCATCATGGCGTGGCTGGGCCCGATGGCGCGCGACACGGT
GCAGTGGCAGTCGGAGCGGAACATGGACCGGACGCGGCGGTTCGACGGCGGCACGCGCGTGTACGCGCTGCAGACGCTGC
GGTGGGCGGACAAGGACAAGGCGGAGGCGGCGATCGTGGAGGTGCTCGTCGCGCTCAGCTGCGTCTGCTGGTACGAGGAG
CGGCGGCGCGGCTCCGTGCGCGTCAGCTGATCGCCGTCGGCCCACCCGCCGCCCG---------TTCAACGACGGCGCGC
CATGGCATGGCCATGGCGACACACCTTGTCCAAAGCCCATTCTTTTTCCTTTCTTCCTTCTTTGGTTCGTTTGTCAAAGC
AATTGATTTGAAGAGTTGAACTTTTTGGAGGGGTTGGTGTTAGATCGTCAGGG--------------GTTAGTAGCAGCT
ATAGTGGACTGTAGCAGCAGCAGTAATCGTTCTTTCTCTAGTTTGAAAATTTGGAGGGAGAAAAAA---GCCAAGGTCCA
GTGGTCGTTGGCCACTTCACTGTCAATGGCAATGGCGTGAGGCCGGCATGAGAGGCCGGTCTCACGCCGGTGACAGCGAG
CGGCCGGTGTATAAGTTTGTCAGATTTGTACGTACAATGAATACACACGATTGATTCTTTGAAAATTTGT-GGGAGTTGT
TCAAGCACGCACGGAGGAAATCCTTGCCGGCACGGTTCTCCTGTCCTTTACCGGG-TGGTGGCGAAGTCGTAGGCGCTCA
GCTACCGCCGTTGAACACATTGATACCTGTCTGACTTGTGTTGTACC---------CGTGGATGA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>SNPs
----------------------------SS-SS--------S--------------------------------------
------------------------------SSSSS-----------------------S----------------SSSSS
------------S-------------------------------------------------------------------
----------------------------------------------S------S----------------S---------
----------------------------S---S-----------------S-----------------------------
-----------------------------------------------------------------S--------------
----------------------------------------------------------------------------S---
-----------------------------------------------------S---------------S----------
-------------S-------------------------------------SSSSSSSSSSSSSSSSSSS-----S----
-------------SSS----------------------------------------------------------------
-S------------------------------------------------------------------------------
---------------------------------------------------------S--------------------S-
---------------------------------------------------------S----S-----S----------S
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S--S--S
--------------------------------S-----------------------------------------------
------------------------S---S---------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------S----------------------------------------S------
---S-----------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------S--------------S----------------------------------------------
-------------------------------------S-----S--S---------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----------S---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-----------------------S-----------S------------------SSSSSSSSSS----------------
-----------S-S--------S---------------------------------------------------------
----------------------------------------------S-------S-------------------------
--------S---------------------------------------------------------SSS-----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-----S----
--------------------------------------------------------------------------------
--------------------------S-S--------------------------------------SS-S-S--S--S-
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_959
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AAGCGATCCAAGACACGGTT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_2950
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CGGGGAATTGT
TCAAGCACG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
