>input_sequence_50763
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--------CCTCCCTTTTTATACTCTTATCTCCTCGCCTTGGCCTCGCTTCACATCCTTACCTGTAGTTTTCCTCACTCC
CTTGACCCCCGCCCGTCCCTAACTAAAGCCCACTAGCGGTAGTAATCCTTGTCAAGCCGGGTGACACCGCGGAGCGAGCG
GAGGGAGAGCGGAGCATGGAGGCCATGGACGTCAAGTACCGGCCGGCCCTCTACCCCAACGGCTCCGTCAAGAAGCTCCG
GCAGGCGGCGGCCGTGCAGCCGCCGGCGCCGCCGGCGGCGGTGGAGGCCGTGCCCACGTACAAGGAGTGCCTCAAGAACC
ACGCGGCGGCCATCGGCGCGCACGCCGTGGACGGCTGCGGCGAGTGGATGCCGGTGGTGGAGCTTAACACCGCCGACCCG
GCCTCGTACAAGTGCGCGGCCTGCGGCTGCCACCGCAACTTCCACCGCCTCGTGATGGTGGAGGGGTCGCCGCCGCCCCC
GCCCCCGCCCCCGCCGGCCCTGCTGCCGGCGCCGCCCATGCCCATGCCCAT------GCCGGCCACCGTGCTCCATGGCC
TGCCGCAGCGCGGGCACGGGCAGGAGACGCCGGATGACCGGCTCCCGGGCGTCGACGGCGACGACTCTGACTCCGACTCG
GATGGCTCCGAGTACGACGACGAGCGCTCCGTCTCCCCGCCCCAGCACCCTCCACCCGCGCACCTTCCGGCTCCGGTGGC
GCAGCAGCCGCCGT---CGTACATCTCTTCTGCGCCACACCCACACATGCTGCTCTCTCTCAACTCCAGCGCGCTGGGGG
CGCCGCAGGGCCAGAGCAGGCTCCCCGCCCAGCTCTCGCCGGCGACGGCGCCGCCGCCCCACGGGATGATGCCGGCCAGG
AAGCGATTCCGCACCAAGTTCACCGCGGAGCAGAAGCAGCGGATGCAGGAGCTGTCGGAGCGCCTGGGGTGGCGCCTCCA
GAAGCGCGACGAGGGCGTGGTCGACGAGTGGTGCCGCGACATCGGCGTGAGCAAGGGCGTCTTCAAGGTCTGGATGCACA
ACAACAAGCACAACTACCTCGGCGGCCACAGCGCCCGCCGCAGCGCTTCAGCCGCGGCCTCCTCCGCCGCGACCACCCCC
ACCGCCCCTGCCGCCGGCGGGCCATTCCGTCTCGCCCCGGCCAGCCCCGCACCAGG---AGCGCCATTCAACCCCTCCGC
CAGCCACAGCTCCCCGGCCCCCACCGCCACCGGCTTCAACATGAACGGTACCGCCTCCTCAGCCTCCACCGCCACCACCA
CCGCCACGCCCACACCCATCTTCGCCGCCGGCCGTAAGCTGAACGGAGCCTCGTCGCCGCAGTCGGCGTGAGCTAAGGAG
AGCAGAGGCAGAGAAGAAGGAGAGGGAAGGAGAAAGGCAAAGACATTTAGCTTTCATTTCAGTTATCATTGCATTACTTT
TCTTTCTGTAGTTTG--------GATCGATCGTTGGTTCCACTAAGAAATTAA---------------------------
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>chr5D_1_TraesCS5D01G234600
TCATTTTTTGTGACACAAGCGACATCTCAAATCCATGGCTAAGCAAAATTGACACCACTTATATGGTGTCGATTTTTTT-
-TAGCAACTC-TAAATGTGCTATGCTAAATTAGATGTATTGAAATTAGCTATGCTCGATAATAGATGCTTAAAATGGGTT
TCATGTGTGTCTCACATGATCACCGAGTGTTGCGAAAACTGAATTATGTTATTGCAATTTGTTACGCGTTGTGGCAAATA
-TATTATGTATATACACGTATCCGCTTGAGACTGACATAAGTGGCGGTGATAATTGACCCCCATGGTTCTATCCCAAAAT
CGATGCCTGTGTTTTGGGATTTACAATTGTTTGGTAAGAATGCATTATTTGTGTTATTATGGTTTTAACATTCGCTATTG
CTCGTAACTTTTGGTGAGAACAGTTTACACGTTTTCTTACTTGATCACATAA---GTAGCAACTTCAAATCAAAGGTTCA
GGGGAGAAACCGCA-TTGTGTTTTCCAGATTAGTTGTGCCCAGTGATAATGTGCTTCCTCACGTTATTGCATGGTGATAT
TTGTGGTTGGTGAAAATCGTT-----------------------------AAACGTGGCTGACAGTGCATGCTTACTGCT
AATTTTCACCTAATTAATAATGAAAACATGCATTGACAGCTCAAATTGTGTGACGAATGTACAACAGTGGTGTACACGCG
TCGCGTCCATCCGTGTGATGATGATGCAAATTGACAGCGCAGAAAATCATGGAGGTCAAACAAAAACGGCCGGGTTTGGG
TGGCGCCCGTCTTGATTGATCCTTTGATCAGCGGTCCATGT-TT-ACTCCTGGGCGGTGACGGTGTGACGCGGGATACAG
ATGCACCTGCAACCGATTCAACACCGTGTGTCGTCATGATCTAATCTATCTATCTATCTACATATCTCTACGATCTTTGG
GAAATTTCTCTTTTGTGTGCATATG---------CTCATCACTAATGGCATGGATTAATGGGGCTTCGTCTTTGAGCGTC
GCCGTCGCCCTCCCTTTTTATACTCTTATCTCCTCGCCTTGGCCTCGCTTCACATCCTTACCTGTAGTTTTCCTCACTCC
CTTGACCCCCGCCCGTCCCTAACTAAAGCCCACTAGCGGTAGTAATCCTTGTCAAGCCGGGTGACACCGCGGAGCGAGCG
GAGGGAGAGCGGAGCATGGAGGCCATGGACGTCAAGTACCGGCCGGCCCTCTACCCCAACGGCTCCGTCAAGAAGCTCCG
GCAGGCGGCGGCCGTGCAGCCGCCGGCGCCGCCGGCGGCGGTGGAGGCCGTGCCCACGTACAAGGAGTGCCTCAAGAACC
ACGCGGCGGCCATCGGCGCGCACGCCGTGGACGGCTGCGGCGAGTGGATGCCGGTGGTGGAGCTTAACACCGCCGACCCG
GCCTCGTACAAGTGCGCGGCCTGCGGCTGCCACCGCAACTTCCACCGCCTCGTGATGGTGGAGGGGTCGCCGCCGCCCCC
GCCCCCGCCCCCGCCGGCCCTGCTGCCGGCGCCGCCCATGCCCATGCCCAT------GCCGGCCACCGTGCTCCATGGCC
TGCCGCAGCGCGGGCACGGGCAGGAGACGCCGGATGACCGGCTCCCGGGCGTCGACGGCGACGACTCTGACTCCGACTCG
GATGGCTCCGAGTACGACGACGAGCGCTCCGTCTCCCCGCCCCAGCACCCTCCACCCGCGCACCTTCCGGCTCCGGTGGC
GCAGCAGCCGCCGT---CGTACATCTCTTCTGCGCCACACCCACACATGCTGCTCTCTCTCAACTCCAGCGCGCTGGGGG
CGCCGCAGGGCCAGAGCAGGCTCCCCGCCCAGCTCTCGCCGGCGACGGCGCCGCCGCCCCACGGGATGATGCCGGCCAGG
AAGCGATTCCGCACCAAGTTCACCGCGGAGCAGAAGCAGCGGATGCAGGAGCTGTCGGAGCGCCTGGGGTGGCGCCTCCA
GAAGCGCGACGAGGGCGTGGTCGACGAGTGGTGCCGCGACATCGGCGTGAGCAAGGGCGTCTTCAAGGTCTGGATGCACA
ACAACAAGCACAACTACCTCGGCGGCCACAGCGCCCGCCGCAGCGCTTCAGCCGCGGCCTCCTCCGCCGCGACCACCCCC
ACCGCCCCTGCCGCCGGCGGGCCATTCCGTCTCGCCCCGGCCAGCCCCGCACCAGG---AGCGCCATTCAACCCCTCCGC
CAGCCACAGCTCCCCGGCCCCCACCGCCACCGGCTTCAACATGAACGGTACCGCCTCCTCAGCCTCCACCGCCACCACCA
CCGCCACGCCCACACCCATCTTCGCCGCCGGCCGTAAGCTGAACGGAGCCTCGTCGCCGCAGTCGGCGTGAGCTAAGGAG
AGCAGAGGCAGAGAAGAAGGAGAGGGAAGGAGAAAGGCAAAGACATTTAGCTTTCATTTCAGTTATCATTGCATTACTTT
TCTTTCTGTAGTTTG--------GATCGATCGTTGGTTCCACTAAGAAATTAACCCCAAGAAAGGGCGCCGTCTGATGTC
TAGAAATCTAAGCTTTATCTGTTCTTGGGATCCGA----TGGAAGCTCGCGATTTAGGATTAATTAGATTATCTGATCTC
AAAAGTGGCACCTTTCTTGGTCTGTTCTTGTCCCTGTAACTGTAAGTTGAGCATCCGCCCGTCCGTCCGTAATAGAAGAA
GTTTATTTCC----TAGT---AGAATAGGCTTGTAGTA---TCATCTCATGCTCAATTGTGCGCTGTGAATTCATGATCG
GAGGCAGCCCCTCTGCTTACAGTGG----TACTTACTCCTGTTGTTCCATTAATCAATTGGCTTAGCCTGTACT-TGCGC
CTGCGCTTTCCTGCTAGGAGTAGAATAATGGTCCTTTTGCGAGGTTTCCCTAACCTAA---ACCCATCATTAGCAGCGCC
ATTTTTATAATGCCCGCCT------TGCATGGATGCATCCCCACGAGCAG------GAGCAGATAGATTAACGTGGGCCT
AAACAAAAGCCAAGCTATAAGACATCACCTTTGCTGCGCTATCTATAGCAGTTAGCACCTTCCT----CGCACGCTTGCC
ATCGCCAGCTACTCGGTATGGAAACGTAGGG-AGGAGGAGTAGAATAGTCGTCGCTGC-C--------CTCTCTCTCATC
CACGCACAACACATTCTTGTCTCGTGTAATTCTCCTTCCATGTATGCTCCCTTTCGCTCTCTAGCGCGTAGCTCCTCCCG
AACCCGTCCCATTTGGGGCGGCACCCCACCA--------CCATCCCCACCATCCCAAAGGCCGGCCGGGAACTCCATCCA
CGCTACTACACGGCGGAAACAAAAAGCGCACGCAGAAGATAGCCATCAAGTCGGGCGATCGTGCGGTTAGGGGGG-TGA-
GAGATGTGGGTTGGGGCCGGATCAGGGTAGGCATGCAGCCATGCAATTAGGCGGCAACCCTGCTTAGCGAAAGTGAATGG
CATGGGGGCATGACAATATGGCATGCGGTAGTAGGAC---------GCCGGCCCGTGTTACTGTTGCTCGTGACCCGACG
>chr5B_1
TCATTATTTGTTACACACGCGACATCTCAAATCCATGGCTAAGCAAAATTGACACTTCCTATATGGTGTAGAAATTTTCT
ATAGCAACTGAAAAATGTGTTATGCTAAATTAGATGTATTGAAATTAGCCATGCTTACTAATAGCTGCTTAAAATGGTTT
GCATGTTT-TTTTGCACGATCATCGAGTGTTGAAAAACTG-CATTATGTTAATGAAATTTGTTATGGCTTGTGGCAAATA
GTACTATGTATATACATTTATGTGCTTGACACCGACATAAGTGGTGGCGATAATTGAATATGTGGCTTATATCCCAAGAT
TGACAACTGTGTTTTGAAATTAACAATTGTTGATTACAAATGCATTATTTGC---ATTATGGTTTTAAGATTTGCTATGG
TTTGTAACTTTCGATAAAAACAGTATACACGTTTTCTTACTTGATCACACAC---GTCGCAACATCAAATCCAGGTTAA-
-GGGAGAAACCACTTTTTTGTTTTCCAGAATTGTTGTGGCCAGTGATAATTGGTG-----------TTTTATCGTGTTAT
TTATATACTTAACCCATACTTATTACAGTATGTATTCTGGGGTTGGTCACAAATGTGGTTGGCAGTGCATGCTTACTACT
AATTTCTACCTAATTGATGA--AAAATATACATTGACAGCTCAAACTGGG-GACAAATGTGCAACAGTGGTGTACACGCG
TCGCCTCCGTCTCTGTGATGATGCGC---------------AAAAATGATGGAGGTCAAACAAAAACGGCCGGGTTTCGG
TGGCGCCTGTCTTGATTGATTCTTCGATCAGCGGTCCATGT-TTAACTCCTGGGCGGTGACGGTGTGACGCGGGATACAG
ATGCACCTGCAACTGATTCAACACAGTGTGTCGTCATGATCTA---------TCTATCTATCTATCTCTACGATCTTTGG
GAAATTTCTCTTTTGTGTGCATATG---------CTCATCACTAATGACATGGATTAATGGGGCTTCGTCTTTGAGCGTC
GCCGTCG----CCCTTTTTATACTCTTATCTCCTCGCCTTGGCCTCGCTTCACATCCTTACCTGTAGTTTTCCTCACTCC
CTTGACCCCTGCCCGTCCCTAACTAAAGCCCACTAGCGGTAGTAATCCTTGTCAAGCCGGGTGACACCGCGGAGGGAGCG
------GAGCGGAGCATGGAGGCCATGGACGTCAAGTACAGGCCGGCCCTCTACCCCAACGGCTCCGTCAAGAAGCTCCG
GCAGGCGGCGCCCGT---GCCGCCGCCGCCGCCAGCGGCGGTGGAGGCCGTGCCCACGTACAAGGAGTGCCTCAAGAACC
ACGCGGCGGCCATCGGCGCGCACGCCGTGGACGGCTGCGGCGAGTGGATGCCGGTGGTGGAGCTCAACACCGCCGACCCG
GCCTCGTACAAGTGCGCGGCCTGCGGCTGCCACCGCAACTTCCACCGCCTTGTGATGGTGGAGGGGTCGCCGCCGCCACC
GCCCCCGCCCCCGCCGGCCCTGCTGCCGGCGCCGCCCATGCCCATGCCCATGCCCATGCCGGCCACCGTGCTCCATGGCC
TGCCGCAGCGCGGGCACGGGCAGGAGACGCCGGATGACCGGCTCCCGGGCGTCGACGGAGACGACTCTGACTCCGACTCG
GATGGCTCCGAGTACGACGACGAGCGCTCCGTCTCCCCGCCCCAGCACCCTCCACCCGCGCACCTTCCGGCTCCGGTGGC
GCAGCAGCCGCCGCCGCCGTATATCTCTTCTGCGCCACACCCACACATGCTGCTGTCTCTCAACTCCAGCGCGCCGGGGG
CGCCGCAGGGCCAGAGCAGGCTCCCCGCCCAGCTCTCGCCGGCGACGGCGCCACCGCCCCACGGGATGATGCCGGCCAGG
AAGCGGTTCCGCACCAAGTTCACCGCGGAGCAGAAGCAGCGGATGCAGGAGCTGTCGGAGCGCCTGGGGTGGCGCCTGCA
GAAGCGCGACGAGGGCGTGGTCGACGAGTGGTGCCGGGACATCGGCGTCAGCAAGGGCGTCTTCAAGGTCTGGATGCACA
ACAACAAGCACAACTACCTCGGCGGCCACAGCGCGCGCCGCAGCGCCTCAGCCGCGGCCTCCTCCGCCGCGACCACCCCC
ACCGCCCCTGCCGCCGGCGGGCCATTCCGTCTCTCGCCGGCCACCGGCGCACCAGCACCAGCGCCATTCAACCCCTCCGT
TAGCCACAGCTCCCCGGCCCCCACCACCACGGGCTTCAACATGAACGGTACCGCCTCCTCCGCCTCCACCGCCACCACCA
CCGCCACGCCCAGCCCCATCTTCGCCGCCGGCCACAAGCTGAACGGAGCCTCATCGCCGCAGTCGGCGTGAACTAGGGAG
AGCAGAGGCAGAGAAGAAGA----GGGAGGAGAAAGGCAAAGCCATTTAGCTTTCATTTCAGTTATCATTGCATTACTTT
TCTTTCTGTAGCTTG--------GATCGTTGGTTCT----ACTAAGAAATTAACCCCAAGAAAGGGCGCCGTCTGATGTC
TAGAAATCTAAGCTTTATTTGTTCTTGGGATCCGA----TGGAAGCTCGCGATTTAGGATTAATTAGATTATCTGATCTC
AAAAGGGGCACCTTTCTTGGTCTGTTCTTGTCCCTGTAAGCTGAGCTCCCG--TCCGTCCGTCCGTCCGTAATAGAAGAA
GTTCATTTCC----TAGTAGAAGAATAGACTTGTAGTA---TCATCTCATGCTCGCTTGT--GCTGTGAATTCATGATCG
GAGGCAGCCTCTCTGCTTACAGTGG----TACTTACTCCTGTTGTTCCATTAATCAATTGACTTAGCCTGTACT-TGCGC
CTGCGCTTTCCTGCTAG------AATAATCGCCCTTTTGCGCGGTTTCCCTAACCTAATAAACCCATCATTAGCAGCGCC
ATTTTTATAATGCTTGCCT------TGC----ATGCATCCCTACGGCCAC------GAGCAGATAGATTAACGTGCGCCT
AAACAAAGGCCAAGCTATAAGACATCACCTTTGCTGCGCTATCTATAGCAGTTAGCATCTTCCTCGCACGCACGCTTGCC
ATCGCCAGCTACTTGTATGGAAATAGAGTATTAGGAGGAGCAGAATAGTCGCCGCTCCGTGCTCCCCTCTCCCTCTCATC
CACGCACAACACATTCTTGTCTCGTGTAATTCTTCTTCCATGTATGTCCCCTTTCGCTCTCTAGTGCCTAGTTCCTCCCG
AACCCGTCCCATTTGGGCACAC-CCCCACCA--------CCATCCCCACCATCCC-AAGGCCGGCCGGGAACTCCATCCA
CGCTACTACACGGCGGAAACAAAAAGCGCACGCAGAAGATAGCCATCAAGTCGGTCGATCGTGCGGTTAGGGGGGGTGAC
GAGATGTGGGTTGGGGCCAGATCAGGGTAGGCATGCAGCCATGCAATTAGGCAGCAACCCGGCTTAGCGAAAGTGAATGG
AA-GGGGGCATGGCATATTGGCATGCGGTAGGAC----------------GCCCGTGTTACTGTTGCTCGTGACCCGACG
>chr5A_1
TCATTATTTGTGACACAAGCGACATCTCATATCCATGGCTATGCAAAACCGACACTTCTTATATGGTGTTGAAATTTTCT
ATAGCAACTG-AAAATGTGTTATGCTAAGTTAAATGTATTGAAATTAGCTATGCTCGATGC--------TTAAATGGGTT
TGATGTTT-TCTCACATAACCACAGAATGTTGCAAAAACTACATTATGTTATTGCAATTTGTTATGGCTTGTGGCAAATA
-TATCACATATATACACGTATCCGCTTGAGGGAAACATAAGTGGTGATTATAATTGAATACGGGGGTTATATCCCAAGAT
TGATGATTGTGTTTTGAGATTTACATTTGTTGGTTGGAAATGCATTATTTGC---ATTATGGTTTTAAGATTTGCTATTG
TTTGTAACTTTCGATAAGAACAGTTTGCACGTTTTCTTACTTGATCACATAGTATGTAGCAACTTCAAATCCAAGTTAA-
-GGGAGAAACCGCA-TTTTGTTTTCCAGATTTGTTGTGGCCAGTGATAATTGGTG-----------TTTCATCGTGTTAT
TTGTATACTTAACCCATACTTATCACAGTATGTATTCTGTGGTTGGTCACAAATGTGTTTGGCAGTGCATGCTTACTAAT
TTGTACTACCCAATTGATGA--AAAACATACATTGACAGCTCAAGTTAGG-GACAAATGTGCAACAGTGGTGTACACGCG
TCGCCTCCATCTCCGTGATGATGCGC---------------GAAAACGAGGGAGGTCAAACAAAAACGGCCGGATTTCGG
TGGCGCCCGTCTTGATTGATCCTTGGATCAGCGGTCCATGTGTT-ACTCCTGGGCGGTGACGGTGTGACGCGGGATACAG
ATGCACCTGCAACCGATTCAGCACAGTGTGTCGTCATGATCTAATCTATCTATCT----ACATATCTCTACGATCTTTGG
GAAATTTCTCTTTTGTGTGTGTGTGTATGCTCATCTCATCACTAATGGCATGGATTAATGGGGCTTCGTCTTTGAGCGTC
GCCGTCG----CCCTTTTTATACTCTTATCTCCTCGCCCTGGCCTCGCTTCACATCCTTACCTGTAGTTTTCCTCACTCC
CTTGACCCCCGCCCGTCCCTAACTAAAGCC-ACTAGCGGTAGTAATCCTTGTCAAGCCGGGTGACACCGCGGAG-----G
------GAGCGGAGCATGGAGGCCATGGACGTCAAGTACCGGCCGGCCCTCTACCCCAACGGCTCCGTCAAGAAGCTCCG
GCAGGCGGCCG------------CGCCGCCGCCGCCGCCGGTGGAGGCCGTGCCCACGTACAAGGAGTGCCTCAAGAACC
ACGCGGCGGCCATCGGCGCGCACGCCGTCGACGGCTGCGGCGAGTGGATGCCCGTGGTGGAGCTCAACACCGCCGACCCG
GCCTCGTATAAGTGCGCGGCCTGCGGCTGCCACCGCAACTTCCACCGCCTCGTGATGGTGGAGGGCTCGCCGCCGCCCCC
GCCCCCGCCCCCGCCGGCCCTGCTGCCGGCGCCGCCCG------TGCCCATGCCCATGCCGGCCACCGTGCTCCATGGCC
TGCGGCAGCGCGCGCACGGGCATGAGACGCCGGAGGACCGGCTCCCGGGCGTCGACGGCGACGACTCTGACTCCGACTCG
GATGGCTCCGAGTACGACGACGAGCGCTCCGTCTCCCCGCCCCAGCACCCTCCGCCCGCGCACCTCCCGGCCCCGGTGGC
GCAGCAGCCGCCGC---CGTACATCTCTTCCGCGCCACACCCGCACATGCTGCTCTCTCTCAACTCCAGCGCGCCGGGGG
CGCCGCAGGGCCAGAGCAGGCTCCCCGCCCAGCTCTCGCCGGCGACGGCGCCGCCGCCCCACGGGATGATGCCGGCCAGG
AAGCGGTTCCGCACCAAGTTCACCGCGGAGCAGAAGCAGCGGATGCAGGAGCTGTCGGAGCGGCTGGGGTGGCGGCTGCA
GAAGCGCGACGAGGGCGTGGTCGACGAGTGGTGCCGCGACATCGGCGTCAGCAAGGGCGTCTTCAAGGTCTGGATGCACA
ACAACAAGCACAACTACCTCGGCGGCCACAGCGCCCGCCGCAGCGCCTCAGCCGCGGCCTCCTCCGCCGCGACCACCCCC
ACCGCCCCTGCCGCCGGCGGGCCATTCCGTCTCGCCCCGGCCAGCCCCGCACCAGG---AGCGCCATTCAACCCCTCCGC
CAGCCACAGCTCCCCGGCCCCCACGGGCACGGGCTTCAACATGAACGGTACCGCCTCCTCCGCCTCCACCGCCACCACCA
CCGCCACGCCCACCCCCATCTTCGCCGCCGGCCGCAAGCTGAACGGAGCCTCATCGCCGCAGTCGGCGTGAGCTAGGGAG
AGCAGAGGCAGAGAAGAAGGAGAGGGAAGGAGAAAGGCAAAGACATTTAGCTTTCATTTCAGTTATCATTGCATTACTTT
TCTTTCTTTCTGTAGTTTGGATCGATCGTTGGTTCT----ACTAAGAAATTAACCCCAAGAAAGGGTGCCGTCTGATGTC
TAGAAATCTAAGCTTTATCTGTTCTTGGGATCCGATGGATGGAAGCTTGCGATTTAGGATTAATTAGATTATCTGATCTC
AAAAGTGGCACCTTTCTTGGTCTGTTCTTGTCCCTGTAAGTTCATCTCCCC------TCCGTCCGTCCGTAATAGAAGTT
TATTTCCTAACTAGTAGAAGAAGAATAGACTTGTAGTAGTATCATCTCATGCTCACTTGT--GCTGTGAATTCATGATCG
GAGGCAGCCTCCCTGCTTGCAGCAGTACTTACTTACTCCTGTTGTTCCATTAATCAATTGGCTTAGCCTGTACTCTGCGC
CTGCGCTTTCCCG------GTAGAATAATGGTTCTTTTGCGCGGTTTCCCTAACCTAA--AACCCATCATTAGCAGCGCC
ATTTTTATAATGCTTGCCTAGCATTTGCATGGATGCATCCCCACGAGCACGAGCACGAGCAGATAGATTAACGTGCGCCT
AAACAAAGGCCAAGCTACGAGACATCACCTTTGCTGCGCCATCTATAGCAGTTAGCACCTTCCT----CGCACGCTTGCC
ATCACCAGCTACTCGCTATGGAAATG-----TAGGAGGAGTAGAATAGTCGTCGCCGCTC--------CTCTCTCCCATC
CACGCACAACACATTCTTGTCTCGTGTAATTCTTCTTCCATGTATGCTCCCTTTCGCTCTCTAGCGCCTAGCTCCTCCCG
AACCCGTCCCATTTGGGCTTGGGCACGCCCCACCACCATCCATCCCCACCATCCC-AAGGCCGGCCGGGAACGCTACTAC
-------ACACGGCGGAAACAAAAAGCGGACGCAGAAGATGGCCGTCAAGTCGGGCGATCGTGCGGTTAGGGGGG-TGAC
GAGATGTGGGTTGGGGCCGGATGAGGGTAGGCATGCAGCCATGCAATTAGGCGGCAACCCGGCTTAGCGAAAGTGAATGG
AGCTGGGGC--------ATGGCATGCGGGAGGACGCCGGCCGGCCGGCCGGCCCGTGTTACTGTTGCTCGTGACC-----
>SNPs
-----S-------------------------------------------------SS------------S--SS----S-
---------S-S-------S--------------------------------------------S---------------
------S-S------------------------S------SS----------------------S-SS------------
--------------------------------S-----------S------------SSS-SSS----S--------S--
S----S----------S--------------S-S--SS-------------SSSS-------------S---S-------
S-S--------S-S-S-----------------------------------S-------------------S---S-SSS
S----------------S-------------S------S-----------SS-SSSSSSSSSSSSS--S---S---S---
----SSSSSSSSSSS--SS----------------------------------S----S--S---------------S--
-----SS--------S--S-SS-------S------------------S-S---S-----S-------------------
----S------SS----------SSSSSSSSSSSSSSSSSS------S-----------------------------S--
------------------------S-------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
-------SSSS---------------------------------------------------------------------
--------------------------------------------------------------------------S-----
SSSSSS--------------------------------------------------------------------------
---------------SSS-------S------------------------------------------------------
----------------------------------------------------------------S---------------
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-------------S------------------------------------------------------------S-----
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-----S-----------------------------------------------------------------------S--
------------------------------------------------S-------------------------------
----------------------------------------------S---------------------------------
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------------------------------S-----------------------------S-------------------
-------------S--------------------S-----------------S----------------------S----
--------------------------------------------------------------------------------
-----------S----------------S-S---SSSSSS----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-SS-SS-SSS-SS----S----------------------
----------------------------S--------------------------S----SS------------------
---------S----------------------------------------------------------------------
-----------------SS----------------------S--------------------------------------
-------------SS----------------------------------S-------------------------S----
-------S------------------------------------------------------------------------
---------------S--------S-SSSSS-------------------------------------------------
---------------------------------S---------------------------------S------------
-----------------SSS--S--------------------------------S------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
S-S---------S--SS--------------S-S-S--------------------------------------------
>forward_303
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-------------------------------------------GCGGTGATAATTGACCCCCA-----------------
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>reverse_1774
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-------------TCGTACATCTCTTCTGCGCC-----------------------------------------------
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>forward_905
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-----CCTGCAACCGATTCAACACC-------------------------------------------------------
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>reverse_2396
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---------------------------------------------------------------------------AGGAG
AGCAGAGGCAGAGAA-----------------------------------------------------------------
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>forward_2373
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---------------------------------GTAAGCTGAACGGAGCCTCG---------------------------
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>reverse_3523
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--TGGGGGCATGACAATATGGC----------------------------------------------------------
