>input_sequence_50690
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--ATGCTCAGCCTCCACCGAGTCGTCAAGAGCAATCTGGTCGCCGGTCTCCTCCGGTTGA---GCCGGACCGCGCCAACG
ACGATGGCAGCACCGGCGGTGGCGCCGCCCGCGTGCCTGCTCGGGAACGGCACCAAGACCGTGGTACTCGAAGTCGACGC
GCTGCTCCTCAAGTCTTCACCGCCGTCGGCCGCGACGCTGTTCCCGCCTTTCTTCCTCATCGCCGTCGAGGCGGGCAGCT
TCGCCCGGGGCCTCCTCCTGCTCGCGCTCTACCCGTTCCTGCACCTCATGACGCACGCGATGTG-T-TAGAGGCCATGAT
CATGGTCAGCTTCTGCGGGCTGCGGCG-GACGAGGCTGCGAGGATCGGCAGGGCCGTGCTGCCCAAGTACTTCTCCAAGG
AGGCGGCGCGCGTGGAGGCGCTGGAGGAGGCGAGGGAGGGGACGACGAGTGAGGTC---GTGGCGGCCGTGAGCAGGTCG
TTCCCGACGGTGATGGTGGAGGCGTTCTTGAAGGATTACGTGGGCTTCGACGCGGTGATCGGCAGGGAGGTCAAGGCGGG
CTATGGATACTTCGCCGGTGTAATGGACGACGGGAACACGTACGC------GGAGAGGCTTAGGGCTGCGCTCAAGAGAG
CCGAAGAGAACACTACGTACCACTACCCGAAGCCCATGATCTTCCACGACGGCCGGCTGGCGTTCACGCCGACACCGGTG
GCCGCGCTCGCCATGTACGTCTACCTCCCCTTCGCCGTCGTGCTCTCCGTCGTCCGCATCGCCATCTACACCCTCCTCCC
GCGGCGCATGATAGGCCCAGCCGCCGCGCTCGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTCCCGCCACCGCGAACG
GCGAGAATGGCGCCTCGGGCGGCCGGCTCTACGCGTGCAACCACCGCACGCTCCTCGACCCGATCGCCATCTCGAGCGCG
CTCGGGAAGCCCGTGTTCGCCGTGACGTACAGCCTGAGCC----------------------------------------
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--------------------------------------------------------CCCTGTCGGAGCTGCTCTCGCCGA
TCCCGCTGCTGCGCCTCACCCGCGGCCGCGACGAGGACCGGCGCCGCATGTCGTCTCTGCTGGGGTGGGGCGACGTGGTG
GGGTGCCCCGAGGGGACGACGTGCCGCGAGCCGTACCTGCTCAGGTTCAG-CCGCTGTTCGCCGAGCTCGCCGACGAGGT
GAGCCCCGTGGCGGTGGACGAGCGCTCCACCATGTTCTACGGCACGTCGACGTCGCCGGGCGCCAAGTGCTTCGACTCGG
TCTTTTTCCTGATGAACCCCCGGCCGGAGTACTCCGTCCAGTTTCTGGAGCCCGTGCGCACAGACAACCCGCGTGGCAGC
ATCGAGGTGGCGAACCAGGTGCAGGGCGTGCTGGCCGGCGCTCTCGGGTTCACGCCGACGGCGCTGACGAGAAAGGACAA
ATACTTGCTGCTCGCTGGTAACGAGGGGGTCGTGTCGACCAAGACAAGCAAAGTCATCTAG-------------------
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>chr1D_1_TraesCS1D01G222100
CACAAATTTACTTCTTGTGAAAGCATATACTTGCTTCTGTGAAAAGTATGCTTCTAAGGGGAAAATATGTGCTTTCACAA
GAAGCACATGTTCGCTTCTTGTGGACGCACATACTTGCTTCCGTGAGAAGTGTGCTAAGTGAAAATTTTACGCTTCCACA
AGAAGCATAGTTGTGCTTCTTGAAAAAGAAAAAAAAGTG-AACGCCGCTACCATTTTTTCGGGCTTCAGATTTTTTTCTT
TATTTTTTAAGTACTCA-TTTTTTTGGTGGCCGGTTTATTCGGTTTTCTTTTTT---GTATTCATTTATTTTAGTGTTTC
TTTGAATTTTTTTTGTTTTTTCATGAAA-----------------------------------AAGTCTTGACCCGATAA
ATCCAACGGTAAAACAGTTTG-GGATTTGGACCACGGTTCAAGAGGTCAAATGTTTTGAATAAACAAATCTACAAAAAAA
AACTCTCAGGTTGCGATGGTTGGTGCACATGCAGTGCCTCACTTGTCAGCCTAGAAGGTAGGGGTGACCTTTGCAAGGGG
TAACTCTTAA--CTAGTGATTTTGTTATTTGTTTGTTTTGAATTTTTTTTTTAGAAAGTAAGCTGTTGTTA-------GC
AGTGAAGGGCCGCTTCTAACAAAAGGAAAGGAAGGCCCAAACTGCGGGGATCATCATACCTGAACAAC--------GACT
GCTGGGCCTTAAACCCACCAAGTTGACGTGGTGGGCCATACGTGTACCAGTCCATACAATAGCCCCCCA-----------
------------------------------------------------------CGGGGGACAGCGACTGAACAGGACTC
CGATTCCTGGTTCTTCCCGAGCGCGATTAAAATTTGAAGTGTAATACAATAGGCAAG-----------------------
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----------------------------------------------CAAG---TAGTCGAGTAGGAATTTCGTTAGGCGC
A---TA-TATAGCAGATATAAATGCATCTGCACTCTTCGTGGAATAGGAGTTTCCAAGGCACCGCACAACAGATCGAGAA
ATCGTGAGGCAAAATCACGGTACGTGCGCGGGCGCGCATGGCCATGGCGATGTCAACCG---GCGACCGCGTCGTCCACC
GCATGCTCAGCCTCCACCGAGTCGTCAAGAGCAATCTGGTCGCCGGTCTCCTCCGGTTGA---GCCGGACCGCGCCAACG
ACGATGGCAGCACCGGCGGTGGCGCCGCCCGCGTGCCTGCTCGGGAACGGCACCAAGACCGTGGTACTCGAAGTCGACGC
GCTGCTCCTCAAGTCTTCACCGCCGTCGGCCGCGACGCTGTTCCCGCCTTTCTTCCTCATCGCCGTCGAGGCGGGCAGCT
TCGCCCGGGGCCTCCTCCTGCTCGCGCTCTACCCGTTCCTGCACCTCATGACGCACGCGATGTG-T-TAGAGGCCATGAT
CATGGTCAGCTTCTGCGGGCTGCGGCG-GACGAGGCTGCGAGGATCGGCAGGGCCGTGCTGCCCAAGTACTTCTCCAAGG
AGGCGGCGCGCGTGGAGGCGCTGGAGGAGGCGAGGGAGGGGACGACGAGTGAGGTC---GTGGCGGCCGTGAGCAGGTCG
TTCCCGACGGTGATGGTGGAGGCGTTCTTGAAGGATTACGTGGGCTTCGACGCGGTGATCGGCAGGGAGGTCAAGGCGGG
CTATGGATACTTCGCCGGTGTAATGGACGACGGGAACACGTACGC------GGAGAGGCTTAGGGCTGCGCTCAAGAGAG
CCGAAGAGAACACTACGTACCACTACCCGAAGCCCATGATCTTCCACGACGGCCGGCTGGCGTTCACGCCGACACCGGTG
GCCGCGCTCGCCATGTACGTCTACCTCCCCTTCGCCGTCGTGCTCTCCGTCGTCCGCATCGCCATCTACACCCTCCTCCC
GCGGCGCATGATAGGCCCAGCCGCCGCGCTCGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTCCCGCCACCGCGAACG
GCGAGAATGGCGCCTCGGGCGGCCGGCTCTACGCGTGCAACCACCGCACGCTCCTCGACCCGATCGCCATCTCGAGCGCG
CTCGGGAAGCCCGTGTTCGCCGTGACGTACAGCCTGAGCC----------------------------------------
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--------------------------------------------------------CCCTGTCGGAGCTGCTCTCGCCGA
TCCCGCTGCTGCGCCTCACCCGCGGCCGCGACGAGGACCGGCGCCGCATGTCGTCTCTGCTGGGGTGGGGCGACGTGGTG
GGGTGCCCCGAGGGGACGACGTGCCGCGAGCCGTACCTGCTCAGGTTCAG-CCGCTGTTCGCCGAGCTCGCCGACGAGGT
GAGCCCCGTGGCGGTGGACGAGCGCTCCACCATGTTCTACGGCACGTCGACGTCGCCGGGCGCCAAGTGCTTCGACTCGG
TCTTTTTCCTGATGAACCCCCGGCCGGAGTACTCCGTCCAGTTTCTGGAGCCCGTGCGCACAGACAACCCGCGTGGCAGC
ATCGAGGTGGCGAACCAGGTGCAGGGCGTGCTGGCCGGCGCTCTCGGGTTCACGCCGACGGCGCTGACGAGAAAGGACAA
ATACTTGCTGCTCGCTGGTAACGAGGGGGTCGTGTCGACCAAGACAAGCAAAGTCATCTAGGATTGTAGGGATGCTTAGA
GTATA------TACATAGTAGAGTGTTGTTTTATGTTACTGTACATTG-ACTGCATAACCACATTTTTTGTATGCCGGAT
TGATGAACTGGGTTTGTTTGGACTTTGGAACGCTAAAGTTTCATATATTTCACATGGGATGGGACACATTATTCATAAGC
TGCCTGGATTCCCTGGAAAAATATCTAAGCGCTAGTCAAATTTCTCCTTCGTATAGCTTCTTCCTCTTGCTGCGCTTCGA
CTCCGGCCGAATTGCTGATCTCCTTGCTACCA-CACCCTCCCCAAGCTGCCAC---------------------------
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----------------------------------------------------------------------------CTCC
ACTGGTCTGCCGCGGCACCTGGCCATCCCTC------CATCCTCTTCTTCAACGCCGGCAACCCCCCTCCCCGT-CCCCC
GTGTTGGCCCCGGCTTGGCATCGTCAATTCGCCATGCCCGGCTGCATCACCCCATCTCCGCCTCACCATCTTCTCTTCCC
AAAAGGCTTGCAAATAGCAAACACGATTTCATATAAATTTGCAAGAATTTCACGTAAATGCTAATCTACTACTCCCTCCG
TCCCATAATACACAGTGTAAAAAACGCTCTTATATCATGGGACGGAGGGAGTACATCAAAGATTTTCCTAAACCTCTTCA
CATAGTTGTACCATACACTTAGGCCTCCTTTGATTTGTAAGAATATTATAGGATAGGATTCCTATAGGAAAATCTTCATT
GGAGCTATTTGGTTTGTAAGAACGGATTTCCTGTGTAGGATTATCCGTCACATTTCAAAGAAAAAGAAAATTAGCACAAA
CCTTATGGAAAATTTTGTATCCTACGAATCGAATAGCACCTCTTTTCCAACAAAAACTGAGATGTATGACATCTCTTTTC
TATTTCTATGATATTCCTATCCTTTGAACCAAAACAGGCCTTAACGTTCATGAACGAGAAGTCAAGAACACAGGCAATGC
ATAATGTGGATAGAACATAGGACATACCAATCACAAATATAAATATATCCACACATATA
>chr1A_1
CACAAATTTGCTTCTTGTGGAAGCATAGACTTGCCTCCGTGAAAAGTGTGCTTCTAAAGGAAAA-TATGTGCTTTCACAA
GAAGCAGGTGTTTGCTTCTTGTGGAAGCATAGACTTGCTTCCGTGAGAAGTGTGCTAAGTGAAAATTTTGTGCTTCCACT
AGTAGCACGGTTGTGTTTCTCGAAAAGGGGAAAAAGGTGAAACCCCCCTACCGTGCTTTCGGGCTCCAAATTTTTTCTTC
ATTTTTTTGGCAATTCATTTTTTTTGGTGGCCGGTTTATTCGGTTTTCTTTTTTTTTGTATTCATTTATTTTATTTTTTC
TTTGATTTTTTGGATTTTCATGGTAAAGTTCCTCAAAGCCTATTAACATGTGTTCTAGCTTCGAAGTCTTGACCCGATAA
ATCCAACAGTGAAAATGGTTCAGGATTTGGACTACGGTTCAAGAGATCAAATGTTTCGAATAAAAAAGTCTACG-AAAAA
AACTTACAGGTTGTGATAAGTGATGCATATGCAATGTGTCATTTGTCAGCCTAGAAAGTCGGGGTGACCTTTGGATGGGG
TAACTTGTCAGCCTAGTGATTTCGTTGTTTGTTTTG-----------TTTTGAGAAAGTAAGCTGTTGTTCGCACTTCGC
AGTGAAGGGCCGCTTCCAACAAAAGGAAAGGAAGGCCCGAACTGCGGAGATCATCAGACCTGAACAAAGAGTCAAAGACT
GCTGGGCCTTGAACCCATCAAGTTGGGTTGGTGGGCCATACATTTACCGGTCCATACAAACGCAAATTTTGTGGATTAGA
ACTCTTTATTTCATTGTCTCAAAAAAACTCTTTATTTCAATCTGTATAGCCCCGCGGGGGACAGCGACTGAACAGGACTC
CAATTCCTGGTTCTTCCCGAACGCGATTAAAATTTGAAGTGTAATACAATAGGCAAGCATGGAGTGAGGCGGTTGTCTCT
GGATCCTTGCGTGGAGTGTAGCAGGCTGGAGGATGTAGGTGGTGCACCGGCTCTGGCGGTGGCGGTGGTGCGAGCGCAGC
CATGGCGGCGGCGGCGCTGCGAGGCCTTGCCAGGAAGGGTCTTGGCGGGCAGCGGGCGTTCGGTTGCTGCCATGTGAGGC
GTGCGGCGTTGCCTCGGCGGTGTGGGTGCCGGAGGGTGGTCGGAGGTGCGGGTCGAATTCATCCTGGTGGCAGTCCCCTG
GCGTGGGTGAAGGCGTTCGTGGCGGAACTGGCTTTGCACCGCTCGGTGGTTGCTGCGGCTCCTAGTCGATGTTGAAGGTG
ATGGCTTTAGGCGTGTTTCCTCAGCAGTGAGGGGGGGTTCGATGGCAAGTTGTTGCGGCGGCGGCGGTGCGAGGCATCTG
ATCGGGACTGGCCGGGATCTTGGAGACTTGGAGATGTGCAGAGCTACGGATGAAAATCCTGTTCGGTTGTGGCCGGACCG
ACGTTGATGGCACCTGCGGGTGTCATTCACCTTCATGGAGGCTTCGTCGAGTGCTACGCCATCTTCCTTGCGACTTCATA
TCGGCAGCTGTCTCCGGGGCGAAAGCCTTGATTCGTAGGATCGGCATGATGGCAACGTCTTTGAGGTTGTTACTCTGTTG
GGAACATTGTGCTGGGAGACTCGAGGTCCCATGATGCACTCCTCTGGTGTTCACCGCTACCCGGATCTTTCTCCTTCGGC
GCCATGTACGGTCGTCGCTGGCTACTCCAAGGAAGCTGGAGTTGCTGTTCTTCGGAGGTCTTCAGTGTCGGCCGAGACGC
GGCTAGGGGCTCGGTGTTGGGTAGGCTTCTTGTGTCGTAGCCGTGTTGTTGTGTTTGGTTGTCCTTGTACGAACCGGGTG
TGGAGTTGGTCACTTTCGTTCTCCGCAACGAATGATTGACGTTGTTGTAAGTCTCATTTCTCTCCTTCTATAAAGCTAAG
GTACGCAATTTGCGTACCCTCGAAAAAAAGTAATACAATAGGCAAGCACG---TAGTCCAGTAGGAATTTCGTTTGGCGC
ATACTAGTATAGCAGATATAAATGCATCTGCACTCTTCGTGGAAGAGGAGTTTCCGAGACACCGCACAACAGATCGAGAA
ATCCTGAGGCTAAATCACGGTACGTGCGCGGGCGCGCATGGCCATGGCGATGTCAACCG---GCGACGGCGTCGTCCACC
GCATGCTCAACCTCCACCGAGTCGTCAAGAGCAATCTCGTCGCCGGTCTCCTCCGGTTCA---TCCCGACTGCGCCGACG
ATGACGGCAGCACCGGCGGTGGAGCCGCCCGCGTGCCTGCTCGGAAACGGCATCAAGACCGTGGTGCTCGAAGTCGACGC
GCTGCTCCTCAAGTCTTCACCGCCGTCAGCCGCGACGCTGTTCCCTCCTTTCTTCCTCGTCGCCGTCGAGGCCGGCAGCT
TCGCCCGAGGCCTCCTCCTGCTCGCGCTCTACCCGTTCCTGCACATCATGACGCACGCGATGTG-TGTAGAGGCCATGGT
CATGGTCAGCTTCTGCGGGCTGCGGCGCGACGAGGCGGCGAGGATCGGCAGGGCCGTGCTGCCCAAGTACTTCTCCAAGG
AGGCGGCGCGCGTGGAGGCGCTGGGGGAGGCGAGGGAGGCGACGGCGAGTGAGGTGAAGGTGGCGGCGGCGAGCAGGTCG
TTCCCGACGGTGATGGTGGAGGCGTTCTTGAAGGATTACGTGGGCTTCGACGCGGTGATCGGTATGGAGGTCAAGGCGGG
CCACGGATACTTCGCCGGTGTAATGGACGGCGGGGAGACGTACGC------GGAGAGGCTTAGGGCTGCGCTCAAGAGAG
CCGAAGAGAACACTTCGTACCACTACCCGAAGCCCATGATCTTCCATGACGGCCGGCTGGCGTTCACGCCGACACCGGCG
GCCGCGCTCGCCATGTACGTGTACTTCCCCTTCGCCGTCGTGCTCTCCGTCGTCCGCATCGCTATCTACACCCTCCTCCC
GCGGCGCCTGATAGGCCCAGCCGCCGCGCTCGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTCCCGCCGCCGCGAACG
GCGAGAGCGGCGCCTCGGGCGGCCGGCTCTACGCGTGCAACCACCGCACGCTCCTCGACCCGATTGCCATCTCGAGCGCG
CTGGGGAAGCCCGTGTTCGCCGTGACGTACAGCCTGAGCC----------------------------------------
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--------------------------------------------------------CGCTGTCGGAGCTGCTCTCGCCGA
TCCCGCTGCTGCGCCTCACCCGCGGCCGCGACGAGGACCGGCGCCGCATGTCGTCGCTGCTGGAGCGGGGCGACGTGGTG
GTGTGCCCCGAGGGGACGACGTGCCGCGAGCCGTACCTGCTCCGGTTCAGCCCGCTGTTCGCCGAGCTCGCCGACGAGGT
GAGCCCCGTGGCGGTGGACGAGCGCTCCACCATGTTCTACGGCACGTCGACGTCGCCGGGCGCCAAGTGCTTGGACTCGG
TCTTTTTCCTGATGAACCCACGGCCGGAGTACTCCGTCCACTTCCTGGAGCCCGTGCGCACAGACAACCCGCGTGGCAGC
ATCGAGGTCGCGAACCAGGTGCAGGGCGTGCTGGCCGGCGCTCTCGGGTTCACGCCCACGGCCCTGACGAGGAAGGACAA
GTGCTTGCTGCTCGCTGGTAATGAGGGGGTCGTGTCGACCAAGACGAGCAAAGTCATCTAGAATTGTAGGGATGTTTAGA
ACATATAGTAGTACATAGTAGAGTGTTGTTTTGCGGTACTGTACATCGCACTGCATAACCACATTTTTTGTATGCCGGAT
TGATGAACTGGGTATGTTTGGA-------ACGCTAAAGTTTCATATATTTCACATGGGATGGGACACATTATTCATCAGC
TGCCTGGATTCCCTGGAAAAATATCTAAGCGCTAGTCAAATTTCTCCTTCGTGTAGCTTCTTCCTCTTGCCGCGCTTCGA
CTCCGGCCGAATTGCCGGTCTCCTTGCTACCCCCACCCTTCCCAAGCTGCCATCTCCACGGAAAATGCATTTACATTCGT
GTTCCGTTCACAGCGTGTATCTCCATCGTCTAAATCTATACATGATGTATGTGAGAAAGCTGAGAAGGGTCCTGCTAGGA
CCCAGGTTAGTCTTGTCCAGTAGTAGGTGACGCGCTATTGATAGATTCACTTTACCCCTCCGACGGTGGAATTAATTCCT
GTGATTATCTCTCTAGCCTATTTTATTGGAAGTAATTTAAACATCACAAAATTAAAATATCATGTTATTGAAATTGTTCT
CAAAGAATGTTCTTTAAATAGTTTTAAATAAAACCAAACTGCATCCCGC-AAAAAAACATAGAACCAAACTTTATTAAAC
TGGTTTTCAAACTTTGCCATGACAAATAGAAGTACTTTTGAAAAACTCTGGCATAGCTCGCAATTTTTGAAAAATAGGTA
GAGAACATTTTAACCGTATTTTTGGAACTTTATCGCCAAAACTCAAAGAACTTTTCATTTTTATTGGTTTCTTCAAAAAT
CCTTCTGATTTTCATGGCAAAGTTCAGGCACATTCTTCATAAAGTCCGATAAAGCCTTCATAAAAGTTGCACGCGCGTGA
TTTTTTAGTGAGGCTGTGGGTTAACATGTAATAATCCTACAGTAACTAGTGACATTATCCTGCAACAAAAAGTAACTAGC
GACGTTAATTATCCATGCCAGATATAATTATGAGGCTGGCCTGCCACTAAACAGGAGCATGGGAGGGAAAAGTGCATAGA
GCATGCGCAGGACCTAGGTAGAGAAACGAATCTACTAGCCTGTGGCTGGTGCATGGCTAACACAATAGTGGGCCTAACTG
ATTGGACAGCATGCTTGATGGCCGGCTCGGATTCACACTGCATACAGAACGTGAACATAAAAAACCGCGTCCCCATCTCC
ACTGGTCTGCCGCGGCACTTGGCCACCCCTCTAAGTCCATCCTCTTCTCCGGTGCCGGCAACCCCCTCGCCGCCCCCCCC
GTGTTGGCCCCGGCTTGGCATCGTCAATTCACCATGCCCTCCTGCATCACCCCATCTCCGCCTCACCATCTTCTCTTCCC
AAAGGGCTTGCAAATAGCAAACACGATTTCATATAAATTTGCAAGAATTACACGTAAATGCTAATCTACACTACATCAAA
GG---------------------------------------------------------AGATTTGCCTAAACCTCTTCA
TATAGTTGTACCATACACTTAGGCCTCCTTTGATTTGTAAGAATATTATAGGATAGGATTCCTATAGGAAAATTTTCATT
GGAGCTCTTTGGTTTGTAAGAACAGATTTCCTA-GTAGGATTATCCTTCACATTTCAAAGAAAAAGAAAATTAGCTCAAA
CCTTATGGAAAATTTCCTATCCTACGAATCGAATAGCACCTCTTTTCCTATAGAAAATGAGATGAATCACATCTCTTTTC
TATTCCTATGATATTCCTATCCTTTGAACCAAAGCAGGCCTTAACTTTCATGAACGAGAAGTTGAGAACACAGGCAATGC
ATAATGTGGATAGAACATAGGACATACCACTCACAAATGTAAATATATCCACACATATA
>chr1B_728
CCCCGC--------------------------------------------------------------------------
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---------------------------------------------------------GGGACAGCGACTGAACAGGACTC
CAATTCCTGGTTCTTCCCGAACGCGATTAAAATTTGAAGTGTAATACAATAGGCAAG-----------------------
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----------------------------------------------CACGTACTAGTCCAGTCGGAATTTCGTTAGGCTC
A---TAGTATAGCAGATATAAATGCATCTGCACTATTCGTGGAAGAGGAGTTTCCAAGGCACCACTGAAAAGATCGACAA
ATCCTGAGGCGATATCACGGTACGTGCGCGGGCGCGCATGGCCATGGCGATGTCAACCG---GCGACCGT----------
--------------------GTCGTCAAGAGCAATCTCGTCACCGGTCTCCTCCGGTTGAGCG---GGACCATGCCGACG
ATGACGGCAGCACCAGCGGTGGCGCCGCCCGCGTGCCTGCTTGGAAACGGCACCAAGACCGTGGTGCTCGAAGTCGACGC
GCTGCTCCTCAAGTCTTCACCGCCGTCGGCCGCGACGCTATTCCCGCCTTTCTTCCTCGTCGCCGTCGAGGCCGGCAGCT
TCGCCCGGGGCCTCCTCCTGCTCGCGCTCTACCCGTTCCTGCACCTCATGACGCACGCGATGTG-TGTAGAGGCCATGGT
CATGGTCAGCTTCTGCGGGCTGCGGCGCGACGAGGCGGCGAGGATCGGCAGGGCCGTGCTGCCCAAGTACTTCTCTAAGG
AGGCGACGCGCGTGGAGGCGCTGGGGGAGGCGAGGGAGGCGGCGACGGGTGAGGTGAAGGCGGCGGCGGTGAGCAGGTCG
TTCCCGACGGTGATGGTTGAGGCGTTCTTGAAGGATTACGCGGGTTTCGACGCGGTGATCGGTAGGGAGGTCAAGGGGGG
CTACGGATACTTCGCCGGTGTAATGGACGACGGGGAGACGTACGC------GGAGAGGCTTAGGGCTGCTCTCAAGAGAG
CGGAAGAGAACACTACGTACCATTACCCGAAGCCCATGATCTTCCACGACGGGCGGCTGGCGTTCACGCCGACACCGGCG
GCCGCGCTCGCCATGTACGTCTACCTCCCCTTCGCCGTCGTGCTCTCCGTCGTCCGCATCGCCATCTACACCCTCCTCCC
GCGGCGCCTGATAGGCCCAACCGCCGAGCTCGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTCCCGCCACCGCGAACG
GCGAGAGTGGCGCCTCGGGCGGCCGGCTCTACGCGTGCAACCACCGCACGCTCCTCGACCCGATCGCCATCTCGAGCGCG
CTCGGAAAGCCCGTGTTCGCCGTGACGTACAGCCTGAGCCGGATGTGGATTTTTAGAACAGCTGCACCCCGGCCCTTGTA
TCCTGGATGTCCAATCTTGCTTTAAGATCTGTGCAACACAACTAACTTTTCGTATGAAAATTTCTCTTTTTTGTTTCTCT
CACATAAAAGATGTCTTTTATGTGAGAGAAACAAAAAAGAGAAATGTGTTTGCACGAATCGCGATGCGTAAAATGGATGG
CTAGATAGAGAGGGCCCTGGTGCAGCTGTGCTATTTTATATTTTCGAGCCTGAGCCCCCTGTCGGAGCTGCTCTCGCCGA
TCCCGCTGCTGCGCCTCACCCGCGGCCGCGACGAGGACCGGTGCCGCATGTCGTCGCTGCTGGAGCGGGGCGACGTGGTG
GTGTGCCCCGAGGGGACGACGTTCCGCGAGCCGTACCTGCTCAGGTTCAGCCCGCTGTTCGCCGAGCTCGCCGACGAGGT
GAGCCCCGTGGCGGTGGACGAGCGCTCCACCATGTTCTACGGCACGTCGACGTCGTCGGGCGCCAAGTGCTTCGACTCGG
TCTTTTTCCTGATGAACCCACGGCCGGAGTACTCCGTCCACTTCCTGGAGCCCGTGCGCACGGACAACCCGCGTGGCAGC
ATCGAGGTCGCGAACCAGGTGCAGGGCGTGCTGGCCGGCGCTCTCGGGTTCACGCCGACGGCGCTGGCGAGAAAGGACAA
GTACTTGCTGCTCGCTGGTAATGAGGGGGTTGTGTCGACCAAGGCAAGCAAAGTCATCTAGGATTGTAGGGAT-------
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>chr3A_879
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-------------------------------------CGTGGAAGAGGAGTTTCCGAGACACCGCACAACAGATCGAGAA
ATCCTGAGGCTAAATCACGGTACATGCGCGGGCGCGCATGGCCATGGCGATGTCAACCG---GCGACGGCGTCGTCCACC
GCATGCTCAGCCTCCACCGAGTCGTCAAGAGCAATCTCGTCGCCGGTCTCCTCCGGTTCA---TCCCGACTGCGCCGACG
ACGACGGCAGCACCGGCGGTGGAGCCGCCCGCGTGCCTGCTCGGAAACGGCATCAAGACCGTGGTGCTCGAAGTCGACGC
GCTGCTCCTCAAGTCTTCACCGCCGTCGGCCGCGACGCTGTTCCCTCCTTTCTTCCTCGTCGCCGTCGAGGCCGGCAGCT
TCGCCCGAGGCCTCCTCCTGCTCGCGCTCTACCCGTTCCTGCACATCATGACGCACGCGATGTG-TGTAGAGGCCATGGT
CATGGTCAGCTTCTGCGGGCTGCGGCGCGACGAGGCGGCGAGGATCGGCAGGGCCGTGCTGCCCAAGTACTTCTCCAAGG
AGGCGGCGCGCGTGGAGGCGCTGGGGGAGGCGAGGGAGGCGACGGCGAGTGAGGTGAAGGTGGCGGCGGCGAGCAGGTCG
TTCCCGACGGTGATGGTGGAGGCGTTCTTGAAGGATTACGTGGGCTTCGACGCGGTGATCGGCAGGGAGGTCAAGGCGGG
CTACGGATACTTCGCCGGTGTAATGGACGACGGGAACACGTACGC------GGAGAGGCTTAGGGCTGCGGTCAAGAGAG
CCGAAGAGAACACTACGTACCACTACCCGAAGCCCATGATCTTCCACGACGGGCGGCTGGCGTTCACGCCGACACCGGCG
GCCGCGCTCGCCATGTACGTCTACTTCCCCTTCGCCGTCGTGCTCTCTGTCGTGCACATCGCCATCTACACCCTCCTCCC
GCGGCGCCTGATAGGCCCAGCCGCCGCGCTCGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTCCCGCCGCCGCGAACG
GCGAGAGCGGCGCCTCGGGCGGCCGGCTCTACGCGTGCAACCACCGCACGCTCCTCGACCCGATTGCCATCTCGAGCGCG
CTGGGGAAGCCCGTGTTCGCCGTGACGTACAGCCTGAGCC----------------------------------------
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--------------------------------------------------------CGCTGTCGGAGCTGCTCTCGCCGA
TCCCGCTGCTGCGCCTCACCCGCGGCCGCGACGAGGACCGGCGCCGCATGTCGGAGCTGCTGGAGCGGGGCGACGTGGTG
GTGTGCCCGGAGGGGACGACGTGCCGCGAGCCGTACCTGCTCAGGTTCAGCCCGCTGTTCGCCGAGCTCGCCGACGAGGT
GAGCCCCGTGGCGGTGGACGAGCGCTCCACCATGTTCTACGGCACGTCGACGTCGCCGGGCGCCAAGTGCTTGGACTCGG
TCTTTTTCCTGATGAACCCACGGCCGGAGTACTCGGTCCACTTCCTGGAGCCCGTGCGCACAGACAACCCGCGTGGCAGC
ATCGAGGTCGCGAACCAGGTGCAGGGCGTGCTGGCCGGCGCTCTCGGGTTCACGCCCACGGCGCTGACGAGGAAGGACAA
GTACTTGCTGCTCGCTGGTAACGAGGGGGTCGTGGCGACCAAGACGAGCAAAGTCATCTAGGATTGTAGGGATGCTTAGA
ATATA------TACATAGTAGAGTGTTGTTTTGCGGTACTGTACATTGCACTGCATAACCACATTTTTTGTATGCCGGAT
TGATGAACTGGGTATGTTTGGA-------ACGCTAAAGTTTCATATATTTCACATGGGATGGGACACATTATTCATCAGC
TGCCTGGATTCCCTGGAAAAATATCTAAGCGCTAGTCAAATTTCTCCTTCATGTAGCTTCTTCCTCTTGCCGCGCTTCGA
CTCCGGCCGAATTGCCGGTCTCCTTGCTACCCCCACCCTCCCCAAACTGCCATCTCCACGGAAAAGGCATTTACATTCGT
GTTCCGTTCACGGCGTGTATCTCCACTGTCTAAATCTACCCATGATGTATGTGAGAAAGCTGAGAAGGGCCCTACTAAGA
CCCAGGTTAGTCTTGTCCAGTAGTAGGTGACGCGCTGTTGATAGATTCACTTTACCCCTTCGATGGTGGAATTAATTCTT
GTGATTATCTCTCTAGCCTATTTTGTTGGAAGTAATTTAAACATCACAAAATTAAAATATCATGTTATTGAAATTGTTCT
CAAAGAATGTTCTTTAAATAGTTTTAAATAAAACCAAACTGCATCCCGCAAAAAAAACATAGAACCAAACTTTATTAAAC
TGGTTTATGAACTTTGCCATGACAAATAGAAGTACTTTTGGAAAACTCTGGCATAGCTCGCAATTTTTGAAAAGTAGGTA
GAGAACATGTTAACCGTATTTTTGGAACTTTATCGCCAAAACTCAAAGAACTTTTTATTTTTATTGGTTTCTTCAAAAAT
CCTTCTGATTTTCATAGCAAAGTTCAGGCACATTCTTCATAAAGTCCGATAAAGCCTTCATAAAAATTGCACGCGCGTGA
TTTTTTAGTGAGGCTGTGGGTTAACATGTAATAATCCTACAGTAACTAGTGACATTATCCTGCAACAAAAAGTAACTAGC
GACGTTAATTATCCATGCCAGATATAATTATGAGGCTGGCTTGCCACTAAACAGAAGCATGGGAGGGAAAAATGCATAGA
GCATGCGCAGGACCTAGGTAGAGAAACGAATCTACTAGCCTGTGGCTGGTGCATGGCTGACACAATGATGGGCCTAACTG
ATTGGACAGCATGCTTGATGGCCGGCTCGGATTCACACTGCATACAGAACGCGAACATAAAAAACCGCGTCCCCATCTCC
ACTGGTCTGCCACGGCACTTGGCCACCCCTCTAAGTCCATCCTCTTCTCTCGTGCCGGCAACCCCCTCGCCGTC-CCCCC
GTGTTGGTCCCGGCTTGGCATCGTCAATTCACCATGCCCGGCTGCATCACCCCATCTCCGCCTCACCATCTTCTCTTCCC
AAAGGGCTTGCAAATAGCAAACACGATTTCATATAAATTTGCAAGAATTACACGTAAATGCTAATCTACACTACATCAAA
GG---------------------------------------------------------AGATTTGCCTAAACCTCTTCA
TATAGTTGTACCATACACTTAGGCCTCCTTTGATTTGTAAGAATATTATAGGATAGGATTCCTATAGAAAAATTTTCATT
GGAGCTCTTTGGTTTGTAAGAACAGATTTCCTA-GTAGGATTATCCTTCACATTTCAAAGAAAAAGAAAATTAGCTCAAA
CCTTATGGAAAATTTCCTATCCTACGAATCGAATAACACCTCTTTTCCTATAGAAAATGAGATGAAT---ATCTCTTTTC
TATTCCTATGATATTCCTATCCTTTGAACCAAAGCAGGCCTTAACTTTCATGAACGAGAAGTCGAGAACACAGGCAATGC
ATAATGTGGATAGAACATAGGACATACCACTCACAAATGTAAATATATCCACACATATA
>chr2D_963
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-----------------------------------------CCATGGCGACTTCGACGACGAGCAACCGCTTCGCGCACC
GCATGCTCAGCCTCCACCGCCTCATCAAGAACAACCTCGTCTCATCTCTCCTCGGGGGCCACCGCCAGACCACGCCGCCG
ACGACGGGAACACCGGTGCCGCTTCCAGCAACACGCCTGCTCGGTAACAGCAAGACCGCCGCGGTTGTCGACGTCGACGC
GCTGCTCCTGAATTCTTCGATGCCGTCTGCGGCGACTTTGTTCCCGCCTTTCTTCCTCGTCGCGGTCGAGGCTGGCAGCT
TCGTCCGAGGCTTCCTCCTGCTGGCGCTCTACCCACTCCTCCGCGTCCTGAAGCACGGGGCGTGTT-TAAAAGCCATGGC
CATGGTCTCCTTCTGCGGGCTGCGGCGCAACGAGGCGGCGAGGATCGGGAGGGCCGTGCTGCCAAAGTATTTCTTCAAGG
AGGCGGCGCACGTGGAGGCGCTAGCGAAGGTGGCCGGAGAGTCGCCGGAAGAGGTGAAGGTGGCGGCGGTCAGCAGGACT
TTTCCAACGGTGATGGTGGAGGCGTTCTTGAAAGATTACGTTGGGTTCGACGCGGTGGTCGGCAGGGAGGTGAAGGCAGG
TTACCGGTACTTCGCCGGCGTGATGGAGGACGAGAAGACGGACACAACGATGGAGAAGCTTATCGATGGGCTAAAGCAAA
CCGAGATGAAAAATACGTGCCATTACCCGAAGCCCATGATCTTCCACGACGGTCGGCTGGCGTTCACGCCGACACCGGCT
GCCGCGCTCGCCATGTACATCTACTTCCCCTTCGCCATCGTCCTCGCCGTCGTCCGCATCGCCATCTACACCATACTCCC
CCGGCGCATGACGGGCGTCGCCGCCGCACTTGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTACTTCCGCGGTCGACG
GAGCCACGGCA------GGCGGCCGGCTCTACGTGTGCAACCACCGCACGCTCCTCGACGCGATCACCATCTCCAGTGCG
CTCGGGAAGTCCGTCTTCGCCGTGACATACAGCCTGGGCC----------------------------------------
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--------------------------------------------------------GCCTGTCCGAGCTCATCTCGCCCA
TCCCGCTGCTCCGGCTGACCCGCGGCCGCGAGGAGGACCGGCGCCGCATGGCGTTGCTGCTGGCGCGGGGTGACGTCGTC
GTTAGCCCCGAGGGCACCACGTGCCGCGAGCCGTACCTGCTCCGGTTCAGCCCGCTGTTCGCGGAGCTTGCCGACGAGGT
GAGTCCCGTGGCGGTGGACGAGCGCTCGACCATGTTCTACGGCACGTCGACGTCGCCAATCGACAAGTGTTTCGACTCGG
TGTACTTCTTGATGAACCCTCGACCGGAGTACTCCGTCCACTTCCTGAAGCCGGTGCCCACCGGCGGCCAGAACAGCAGC
ATCGAGGTGGCGAACCAGGTGCAGCGGGTGCTCGCCGACGCGCTGGGGTTCACGCCCACGGCGCTGACGAGGAAGGACAA
GTACATGCTGCTCGCCGGCAACGAAGGGACAGTGGCGACGAAGAAAAGCAA-----------------------------
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>chr2A_963
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-----------------------------------------CCATGGCGACTTCGACGACGAGCAATCGCTTCGCGCACC
GCATGCTCAGCCTCCACCGCCTCATCAAGAACAACGTCGTCGCATCTCTCCTCGGGGGCCACCGCCAGACCACGCCGGCG
ACGACGGGAACACCGGTGCCGCTTCCAGCAACACGCCTGCTCGGTAACAGCAAGACCGCGGCGGTTGTCGACGTCGACGC
GCTACTCCTGAATTCTTCGATGCCGTCCGCGGCGACTTTATTCCCACCTTTCTTCCTCGTCGCGGTCGAGGCTGGCAGCT
TCGTCCGAGGCTTCCTCCTGCTGGCGCTCTACCCGTTCCTCCGCGTCCTGAAGCATGGGACGTGTT-TAAAAGCCATGGC
CATGGTCTGCTTCTGCGGGCTGCGGCGCAACGAGGCGGCGAGGATCGGGAGGGCCGTGCTGCCAAAGTATTTCTTCAAGG
AGGCGGCGCACGTGGAGGCGCTAGCGAAGGTGGCCGGAGAGTCGCCGAAAGAGGTGAAGGTGGCAGCGGTTAGTAGGACT
TTTCCAACGGTGATGGTGGAGGCGTTCTTGAAAGAGTATGTTGGGTTCGACGCGGTGGTCGGCAGGGAGGTGAAGGCAGG
TTACCGGTACTTCGCCGGCGTGATGGAGGACGAGAAGACGGACACAACGATGGAGAGTCTTGTTGATGGGCTAAAGCAAA
CCGAGATGAAGAATACGTGCCATTACCCGAAGCCCATGATCTTCCACGACGGTCGGCTGGCGTTCACGCCGACACCGGCT
GCCGCGCTCGCCATGTACATCTACTTCCCCTTCGCTATCGTCCTCGCCATCGTCCGCATCGCCATCTACACCATACTTCC
CCGGCTTATGACGGGCGTCGCCGCCGCACTTGCCGGCGTGCGGGTGCGCGTCACCGGCGCCCCTACTTCCGCGGTCGACG
GAGCCACGGCA------GGCGGCCGGCTCTACGTGTGCAACCACCGCACGCTCCTCGACGCGATCGCCATCTCCAGTGCG
CTCGGGAAGTCCGTCTTCGCCGTGACCTACAGCCTGGGCC----------------------------------------
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--------------------------------------------------------GCCTGTCCGAGCTGATCTCGCCCA
TCCCGCTGCTCCGACTCACCCGCGGCCGCGAGGAGGACCGGCGCCGCATGGCGTTGCTGCTGGCGCGGGGTGACGTCGTC
GTTAGCCCCGAGGGCACCACGTGCCGCGAGCCGTACCTGCTACGGTTCAGCCCGCTGTTCGCGGAGCTTGCCGACGAGGT
GAGCCCCGTGGCGGTGGACGAGCGCTCGACCATGTTCTACGGCACGTCGACGTCGCCAATCGACAAGTGCTTCGACTCGG
TGTACTTCTTGATGAACCCTCGACCGGAGTACTCCGTCCACTTCCTGAAGCCGGTGCCCACCGGCGGCCAGAACAGCAGC
ATCGAGGTGGCGAACCAGGTGCAGCGGGTGCTCGCCGACGCGCTGGGGTTCACGCCCACGGCGCTGACGAGGAAGGACAA
GTACATGCTGCTCGCCGGCAACGAAGGGACAGTGGCGACGAAGAAAAGCAA-----------------------------
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-----------------------------------------------------------
>SNPs
---------S---------S-------S------S--S---------S---------S--S---S---------------
------SS----S------------S---S-S-------------------------------------SS--------S
--S----SS------S----S-----S-SS-----S-------S--S-----S-SS---------S--S-------SS-S
SS------SSSS-S-----------------------------------------------------------S-S----
-----S-----SSSS---SS-SS-S--S----------------------------------------------------
-------S--S---SS-S--S-----------S------------S----------S-------S--S-----SS-----
----SS-------S---SSS--S----S-----S--SS---S--------------S--S-------------S-S----
-----SS-S-------------S---S-------SSSSSSSSSSSSS----S------------------S---------
----------------S---------------------S--------S--------S----------S------------
----------S------S-------SSS-------------S-S----S----------SS--SSSSSS-----------
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-S------------------S-----------------------------------------------------------
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------------------------------------------------S---------S---------------------
--------------------------------------------S-----------------------------------
---S------S---------------------------------------------------------------------
-------------------------------------S--------------------------------------S---
----S---------------------------------------S--------------------S--------------
----------------------------------------------------------S-------------S-------
------------------------------------------------------------------------------S-
------------------------------------S-------------------------------------------
------------------------S--------------S---------------S-----------S------------
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---S----------------------------------------------------------------------------
------------------------------------------------------------------------------S-
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------S-------------------------------------------------------------------------
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-------------------------------------------------------S-------S-S--------------
-S------------------------------------------------------------------------------
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-------------------S--------------------S--S------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
S-------------------------------SS-S--------------------------------------------
-------------S--------SSSSSSS-----------------------------------------------S---
----------------------------------------------------S-----------------S---------
---------------S-S-------------S--------------------S---------------------------
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------------------S------S----------------------S-SSS-------------SSS--SSS------
------------------------------S-------------------------------------------------
---S---------------------------------------------S-------------------SSSS-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--------------
S------------------------------------------------------------------------S------
------S----------------S--------SS------------S----------------------------S----
---------------SS-------------------------------S-S-S---S-------S--S------------
----S----------------------------S-----------S-----------------S----------------
-----------------------------S--------S--------------------
>forward_446
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--------------------------TTGGACCACGGTTCAAGAGG----------------------------------
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>reverse_2479
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------------------------------------------------------------------------------AT
CATGGTCAGCTTCTGCGG--------------------------------------------------------------
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>forward_2379
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---------------------------------------GTTCCCGCCTTTCTTCCTCA---------------------
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>reverse_5397
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------------------------------------ATGGGACGGAGGGAGTACAT------------------------
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-----------------------------------------------------------
