>input_sequence_50629
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-------------------------------------------------------------------------------A
TGGCACCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCCCCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACCGC
CACCGCGACCGCGACGACCCCCCCTCCGACACCGACCCCTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGC
CGCCGCGCCCTCCTCCACCCCCTCCGTGGCGGCCGACTCCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCG
ACGCCGAGGCGCACCGCCGCCCCGCCCCCAAGCCCGCCGCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCC
CCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTCTGACGCCGAGGCCGACCGCCGCCTCGCC---CCCAAGGCCGC
CGCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGC
CCGCGGCCTCCGACGCCGACCTCGACCCGGCCGCCGGCGCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCG
CGCCGCCCCCGCGCCGAGGCCTCCATCATCAAGCCCATCAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCAGCGCCTC
TGCCTCCGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCGCCATATCAGCTCCCTCTCCGGACCCGCTGAAGCGCCCGTCGC
GGCTCTGGAGCCATGGCGACGAGCTTCTCATCCTGCGCGGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGT
TCCACCAATGACATCGGTAAGCTCCACAGCCACATCCGTGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGA
TAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTGCTTGCCACCCGTGCCAAGAATGGACGGGAGCAGGAATTGCACACTC
CGCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTTTGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGT
GGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATTGCAATACAGTGGAGATAGTGATGATGATATGGAGAGTCAGAG
GGATGACCGTTACCACATCAAGAACCGGAAGGTGAGGCCGATTACAGCGGCAAATGGCAATGGAATTGGACTTGGGGCTG
TCAATGCCAATGGCAGAGGGAAAAGCGGGCTTGAGAAGGGAAAGGATGCATATCCCTACCTGTGGGAGACTGTCGAGGAG
CTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAAGGCATTTGAGGTGCTCGAAGGATCAAAAGTGCGAGCCATTGA
GGAAAAGCTGAGGAGGTTTAGGTTGATGGAGATCAGACAGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGA
TGGTGCTCGATGCCCTTGAGAGTGCTGACTGA------------------------------------------------
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>chr5B_1_TraesCS5B01G233000
TTTCATCTTCATCTCACCAAGCAAGGCAAAGGCTTGAGATTGGTCATCTGGTGCCACCTGACAATATCCTCAAGGAGGAG
GA---GTGTTCATATGGACGAGGGGATCCAACGTGGAACACAATCTCGCTAACCCGACTTCATATGAGAGCACCAAGATC
TTTCGCAAACTCGATCGAATGGCAATACCAATGCGCACATCTCAACGGAGGAACACCCGATGATAAAAAAGAAAACTAGA
AGCAAACACCATCACCCCCGCACAGTCAAATGCAACCATGGACCTTAAACCGGCCACCACACTCCAATCGAAACGTCAAA
CAAGCAAGACATGATCAGAGGCTTCAAGACGATGGACCAAGGAGGTTACGACGCCGAGGACGTCGTCTCGTCCAGTCCAG
AAGCTGGATATGAGGCTTTCACCTCGAGAGCACATATGGTCAATGTGTGAAAGATCCGCGACAATGCCTTCGAGAAGGAA
AGTGACGCCCTAAACTG-AACTCACATCATGCTGTTGCAT------AACCTAGCCAAACTTGAACCAGTCTGACCCGAGT
CAAAAGAGAACG-GGCCTGGTAGACACCCCGCCGGAGCGAGCACCGCCCGGTCGCGCCGACTGTTTCGCCACGAGACGGC
GAATCCTTCTGGGTCAGTAATTGGTGTGCTGGCCGCCGCATGCCGCGGACAGGCATTGGCATTGGCATTGCGCACCGCAC
GGAACGCCGGCACGGCACCCACCCACCCACCCAC--CGTGGGCGTGGCGCATGCCAATCAAGCACGCCCACCCGC---AC
CCAACGACTCGATCGCACGCACCGCGCCGCGCCGCGCCGCGCCCTGCCTC----------TTAAAATATCGGCACCGATG
CGGATACAGGTTACCCAAGGGCCGCCGGGTGGGTTAGCAGCAGAGCACAGCACAC--CACACCACAGCGCAGCGCAGA-C
CCCCAGCGCGACGCGAGGGACACGAGGCGAG----AGCGCCCCAGGCCAGACCTCGCCGCC-CCGCCCCG-----CCGCA
TGGCACCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCCCCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACCGC
CACCGCGACCGCGACGACCCCCCCTCCGACACCGACCCCTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGC
CGCCGCGCCCTCCTCCACCCCCTCCGTGGCGGCCGACTCCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCG
ACGCCGAGGCGCACCGCCGCCCCGCCCCCAAGCCCGCCGCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCC
CCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTCTGACGCCGAGGCCGACCGCCGCCTCGCC---CCCAAGGCCGC
CGCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGC
CCGCGGCCTCCGACGCCGACCTCGACCCGGCCGCCGGCGCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCG
CGCCGCCCCCGCGCCGAGGCCTCCATCATCAAGCCCATCAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCAGCGCCTC
TGCCTCCGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCGCCATATCAGCTCCCTCTCCGGACCCGCTGAAGCGCCCGTCGC
GGCTCTGGAGCCATGGCGACGAGCTTCTCATCCTGCGCGGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGT
TCCACCAATGACATCGGTAAGCTCCACAGCCACATCCGTGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGA
TAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTGCTTGCCACCCGTGCCAAGAATGGACGGGAGCAGGAATTGCACACTC
CGCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTTTGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGT
GGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATTGCAATACAGTGGAGATAGTGATGATGATATGGAGAGTCAGAG
GGATGACCGTTACCACATCAAGAACCGGAAGGTGAGGCCGATTACAGCGGCAAATGGCAATGGAATTGGACTTGGGGCTG
TCAATGCCAATGGCAGAGGGAAAAGCGGGCTTGAGAAGGGAAAGGATGCATATCCCTACCTGTGGGAGACTGTCGAGGAG
CTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAAGGCATTTGAGGTGCTCGAAGGATCAAAAGTGCGAGCCATTGA
GGAAAAGCTGAGGAGGTTTAGGTTGATGGAGATCAGACAGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGA
TGGTGCTCGATGCCCTTGAGAGTGCTGACTGAATAATGGCTGATCGATAGTGATTGGTAAACTGTTGGAAGGGGGAAATC
ACTCTTTTTGTTTCTAGATAGACTATATGTGGTTAATTACTTACTTCCCTGGACAAGGTTGCAGTTGCCTCCATCAAAAT
TAGGCATAGAACATGGAGTGATGGTCTTCTCCTTGTTATTGTTCATGGATCATTGTATTTTGGGATTCTTAGGTGCTAAC
TTGTGGTTTATATGCTATTTGGTTGTGTCAAATCAGGGTTCTTGCATCCTCGTTTTGAATGCTGTGTTCACATATCCCT-
CCTTTGTGCTGGGCCTTTTAAATCACATCATCTGCAGGCTCGTCAAAATTGGGTGCTAGCGTCTTACGCATTGTTTGCAG
CATAGAGTTGCATAATTTTGTGACCATGCTAGGTCAAGTCATTGTGCTTAATTAATTAGAGTTGCAGTGTCTTCTTTTTG
GTTTCTTGATTGATTGGCATTTCCAGTTGTGTACTCACCTTAA-TAATCTTGTAATTGTAGTTGAGGAACAATCTGTTAC
TGTGCATGCTTCAGGGCCTGTTAGATTTAAGCGGCGT--------------------------------------GTTAT
ATTTAAGCAAGCTCTTATAGTGAGAATGTTGTTTATATA--TGCTGTAAAGTTTGCCAGATGTTGCTCCTACCATCCATT
ATGTAAGGCATGCCAATTTGGCTTGAATTGAATAG----GAATGATGTTGTCCTGTGGTTGTTATAGTTGTGGGTCAAAA
GTAGGGGTTTAGCTTTAACATGATTCGCTAGTGCTTTCATCACAGAACACATTCTTTGAAAAGGGGATATTCTGAAGTCG
ATGCTTTCTCGTTCTCGGGATGGGAATAGTCTGAAATACACCTGATGGAAACCTTTGTTGATTGTGATCTCTACACATGT
TCAATGTCTATATATGCTGTTGTGCGGATGTTATGCGTTTCTATGTTGGTGAGCTTGTGTTCTGCACTTCTGCGTTTTGG
TGTCCCCCCTTGCCTTAGTTTTTTCTTCTCACTGGTGT
>chr5D_1
TTTCATCTTCATCTCACCAAGCAAGGCAAAGGCTTGA------------------------CAATATCCTTAAGGAGGAG
GAGGTGTGTTCATATGGACGAGGGGATCCAACGTGGAACACTATCTCGCTAACCCGACTTCAGATGAGAGCATCAGGCTC
TTTCGCAAACTCGATCGAATGGCAATACCAATGCGCACATCTCAATGGAGGATCACATGAGGATAAAGA--AAAACTAGA
TGCAAACACCACCAACCCTGCACCGCCAAATGCAACTATAGACCTTAAACCGGCCACCACACTTCAATCGAGACGTCAAA
CAAGCAAGACATGATCAGAGGCTTCAAGATGATGGACCAAGGAGGTTGCGACGCCCAGGACGTCGTCTCGTCCGGTCCAG
AAGCTGGATACGAG-------CCTCGAGAGCACATGTGGTCAATGTGTGAAAGATCCACGACAATGCCTTCGAGAAGGAA
AAGGGCACCCTAAACTTTAATTCACATCATGCTGTTGCACTCGATAAACCTAGCCAAACTTGAACCAGTCTGACTCGAGT
CAAAAGAAAACGAGGCGAGGTGGACACCCGGCCGGAGCGAGCACCGCCCGGTCGCGCCGACTGTTTCGCAAGGAGACGGC
GAACCCTCTTGGGTCAGTAATTGGCGTGCTGGCCGCCGCATGCCGCGGACAGGCATTGGCATCGGCATTGCGCACCGCAC
GGAACGCCGGCACGGCACCCACCCACCCACCGCGGGCGTGGGCGTGGCGCATGCCAATCAAGCACGCCCACCCGCCGCAC
CCAACGACTCGATCCCACGCACCGCGCCG--------------------C----------TTAAAATATCGGCACCGATG
CGGATACAGGTTACCCAAAGGCCGCCGGGTGGGTTAGCAGCAGAGCACAGCACACACCACAGCCCAGCGCAGCGCAGACC
CCCCAGCGCGACGCGAGGGACACGAGGCGAGCGAGAGCGCCCCAGGCCAGAGCCAGACCTCGCCGCCCCG-----CCGCA
TGGCGCCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCCCCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACGGC
CGCCGCGACCGCGACGACCCCCCCTCTGACACCGACCCCTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGC
CGCCGCGCCCTCCTCCACCCCCTCCGTCGCGGCCGACTCCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCG
ACGCCGAGGCGCACCGCCGCCCCGCGCCCAAGCCCGCCGCCTCCTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCC
CCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTCCGACGCCGAGGCCGACCGCCGTCTCGCCGCTCCCAAGGCCGC
CCCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGC
CCGTGGCCTCGGACGCCGACCTCGACCCGGCCGCCGGCGCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCG
CGCCGCCCCCGCGCGGAGGCATCCATCATCAAACCCATCAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCAGCGCCTC
TGCCTCGGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCGCCATATCAGCGCCCTCTCCGGACCCGCTGAAGCGCCCGTCGC
GGCTCTGGAGCCATGGCGACGAGCTTCTCATCCTGCGCGGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGT
TCCACCAATGACATCGGTAAGCTCCACAGCCACATCCGTGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGA
CAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTACTTGCCACCCGTGCCAAGAATGGACGGGAGCAAGAATTGCACACTC
CTCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTTTGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGT
GGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATTGCAATACAGCGGAGATAGTGATGATGATATGGAGAGTCAGCG
GGATGACCGCTACCACATCAAGAACCGGAAGGTGAGGCCAATTACAGCGGCCAATGGCAATGGGATTGGGCTTGGGGCTG
TCAATGCCAATGGCAGAGGGAAAAGCGGGCTTGAGAAGGGGAAGGATGCATATCCCTACCTGTGGGAGACTGTTGAGGAG
CTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAAGGCATTTGAGGTGCTCGAAGGATCAAAAGCGCGGGCCATTGA
GGAAAAGCTGAGGAGGTTTAGGTTGACGGAGATCAGACAGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGA
TGGTGCTCGATGCCCTTGAGAGTGCTGACTGAATAATGGCTGATCGATAGTGATTGGTAAACTGTTGGAAGGGGGAAATC
AGTCTTTTTGTTTCTAGATAGACTATATGTGGTTAATTACTTACTTCCCTGGACAAGGTTGCAGTTGCCTCCATCAAAAT
TAGGCATAGAACATGGAGTGATGGTCTTCTCCTTGTTATTGTTCATGGATCATTGTATTTTGTGATTCTTAGGTGCTAAC
TTGTGGTTTATATGCTATTTGGTTGTGTCAAATCAGGGTTCTTGCATCCTCGTTTTGAATGCT------ACATATCCCCC
CCTTTGTGCTGGGCCTTTTAAATCACATCATCTGCAGGCTGGTCAAAATTGGGTGCTATCGTCTTACGC----------G
CATAGAGTTGCATAATTTTGTGACCATGCTAGGTCATGTCATTGTGC----TTAATTAGAGTTGCAGTGTCTTCTTTTTG
GTTTCTTGATTCATTGGCATTTCTAGTTGTGTACTCACCTTAACTAATCTTGTAATTGTAGTCGAGGAACAATCTGCTAC
TGTGCATGCTTCAGGGCCTGTTAGATTTAAGCGGCGT--------------------------------------GTTAT
ATTTAAGCAAGTTCTTATAGTGAGAATGTTGTTTATATA--T--TGTAAAGTTTGCGAGATGTTGTTCCTACCATCCATT
ATGTAAGGCATGCCAATTTGGCTTGAATTGAATAG----GATGA----TGTGCTGTGGTTGTTATAGTTGAGGGTCAAAA
ATAGGGGT-TAGCTTTAACATGATTCACTAGTGCTTTCATCACAGAACACATTCTTTGAAAAGGGGATATTCTGAAGTCG
ATGCTTTCTCAGGAT-GGAAT---AGTAGTCTGAAATACACCTGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGT
TTAATGTC----TATGGTGTTGTGCGGCTGTTATGCGTGTCTATGTCGGTGAGCTTGTGTTACACACTTCTGCGTTTTGG
TGTCCCCCCTTA-----GTTCTCTCATCTCACTGGTGT
>chr5A_668
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--------------------------------------CATGCCGCGGACAGGCATTGGCATTGGCATTGCGCACCGCAC
GGAAGGCCGGCACGGCACCCACCCACCCACCGCGGGCGTGGGCGTGGCGCATGCCAATCAAGCACGCCCACCCGCCGCAC
CCAACGACTCGATCGCACGCACCGCGCCG--------------------CGCTCTGCCTCTTAAAATATCGGCACCGATG
CAGATACAGATTACCCAAGGGCCGCC----GGGCTAGCAGCAGAGCACAGCACAC--CACA----------GCGCAGA-C
CCCCAG-----CGCGAGGGACACGAGGCGAG----AGCGCCCCAGGCCAGACCTTGCCGCCCCGCCGCCCGCGTCCCGCA
TGGCACCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCCCCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACCGC
CGCCGCGGCCGCGACGACCCCCCCTCCGACACCGACCCCTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGC
CGCCGCGCCCTCCTCCACCCCCTCCGTCGCGGCTGACTCCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCG
ACGCCGAGGCGCACCGCCGCCCCGCGCCCAAGCCCGCCGCCTCCTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCC
CCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTCTGACGCCGAGGCCGACCGCCGCCTCGCCGCTCCCAAGGCCGC
CCCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGC
CCGTGGCCTCGGACGCCGACCTCGACCCGGCCGCCGGCGCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCG
CGCCGCCCCCGCGCCGAGGCATCCATCATCAAGCCCATCAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCGGCGCCTC
TGCCTCCGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCGCCATATCAGCGCCCTCTCCGGACCCGCTGAAGCGCCCCTCGC
GGCTCTGGAGCCATGACGACGAGCTTCTCATCCTGCGCGGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGT
TCCACCAATGACATCGGTAAGCTCCACAGCCACATCCGTGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGA
TAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTGCTTGCCACCCGTGCCAAGAATGGACGGGAGCAGGAGTTGCACACCC
CGCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTCTGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGT
GGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATTGCAATACAGCGGAGATAGCGATGATGATATGGAGAGTCAGCG
GGATGACCGCTACCACATCAAGAACCGGAAGGTGAGGCCAATTACAGCGGCCAATGGCAATGGGATTGGGCTTGGGGCTG
TCAATGCCAATGGCAGAGGGAAAAGTGGGCTTGAGAAGGGGAAGGATGCATATCCCTACCTGTGGGAGACTGTTGAGGAG
CTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAAGGCATTTGAGGTGCTCGAAGGATCAAAAGCACGGGCGATAGA
GGAAAAGCTGAGGAGGTTTAGGTTGACGGAGATCAGACAGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGA
TGGTGCTCGATGCCCTTGAGAGTGCTGACTGAATAATGGCTGATCGATAGTGATTGGTAAACTGTTGGAAGGGGGAAATC
AGTCTTTTTGTTTCTAGATAGACTATATGTGGTTAATTACTTACTTCCCTGGACAAGGTTGCAGTTGCCTCCATCAAAAT
TAGGCATAGAACATGGAGTGATGGTCTTCTCCTTGTTATTGTTCATGGATCATTGTATTTTGGGATTCTTAGGTGCTAAC
TTGTGGTTTATATGCTATTTGGTTGTGTCAAATCAGGGTTCTTGTATCCTCGTTGTGAATGCTGTGTTCACATATCCCCC
CCTTTGTGCTGGGCCTTTTAAATCACATCATCTGCAGGCTGGTCAATATTGGGTGCTATTGTCTTACGCGCT--------
--TAGAGTTGCATAATTTTGTGACCATGCTAGGTCATGTCATTGCGC----TTAATTAGAGTTGCAATGTCTTCCTTTTG
ATTTCTTCATTG----GCATTTCTAG-----------------------TTGTAATTGTAGTTGAGAAACAA-CTGCTAC
TGTGCATGCTTCAGGGCCTGTTAGATTTAAGCGGCGTGTTATATTTAAGCAAGTTCTTATAGTGAGAATGTTGTTGTTAT
ATTTAAGCAAGTTCTTATAGTGAGAATGTTGTTTATATA--T--TGTAAAGTTTGCGAGATGTTGCTCCTACCATCCATT
ATGTAAGGCCTGCCAATTTTGCTTGGATTGAATAA----GATGG----TGTGCTGTGGTTGTTATAGTTGAGGGTCAAAA
GTAGTGGT-TAGCTTTAACATGATTCGCTGGTGCTTTCATCACATAACACATTCTTTGAAAAGGGGATATTCTGAAGTCG
ATGCTTTCTCGGGATGGGAAT---AGTAGTCTGAAATACACCTGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGT
TTAATGCC----TATGCTGTTGTGCGGCTGTTATGCGTGTCTATGTCGGTGAGCTTGTGTTATGCACTTGTGCGTTTTGG
TGTCCCCCC-----------------------------
>chr4A_2851
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-------------AATCTTGTGGCCATGGTAGGTCATGTCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTA
GTTTCTTGATTGATTGGCATTTCTAGTTGTGCACTCACCTTAACTAATCTTGTATTTGTAGTTGAGGAACAATCTGCTAC
CATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTGTTA--------------------------------------T
ATTTAAGCAAGTTCTTATAGTGATAATGTTGTTTATATATGT--TGTAAAGTTTGTGAGATGTTGCTCCTACCATCCATT
ATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATGATGC----TGTGTTGTGGTTGTTATAGTTGAGGGTCAAAA
GTAGGGGT-TAGCTTTAACATGATTCGCTAGTGCTTTCATCACAGAACACATTCTTTGAAAAGGGGATATTCTGAAGTCG
ATGCTTTCTCGGGATGGGAAT---AATAGTCTGAAATACACATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGT
TTAATGTC----TATGCTGTTGTGCGGCTGTTATGTGTGTCTATGTCGGTGAGCTTGTGTTATGCACTTCTGCGTTTTGA
TGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGT
>chr4A_2851
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-------------AATCTTGTGGCCATGGTAGGTCATGTCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTA
GTTTCTTGATTGATTGGCATTTCTAGTTGTGCACTCACCTTAACTAATCTTGTATTTGTAGTTGAGGAACAATATGCTAC
CATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTGTTA--------------------------------------T
ATTTAAGCAAGTTCTTATAGTGATAATGTTGTTTATATATGT--TGTAAAGTTTGTGAGATGTTGCTCCTACCATCCATT
ATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATGATGT----TGTGTTGTGGTTGTTATAGTTGAGGGTCAAAA
GTAGGGGT-TAGCTTTAACATGATTCGCTAGTGCTTTCATCACAGAACACATTCTTTGAAAAGGGGATATTCTGATGTCG
ATGCTTTCTCGGGATGGGAAT---AATAGTCTGAAATACACATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGT
TTAATGTC----TATGCTGTTGTGCGGCTGTTATGTGTGTCTATGTCGGTGAGCTTGTGTTATGCACTTCTGCGTTTTGA
TGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGT
>chr4A_2851
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-------------AATCTTGTGGCCATGGTAGGTCATGTCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTA
GTTTCTTGATTAATTGGCATTTCTAGTTGTGCACTCACCTTAACTAATCTTGTATTTGTAGTTGAGGAACAATATGCTAC
CATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTGTTA--------------------------------------T
ATTTAAGCAAGTTCTTATAGTGATAATGTTGTTTATATATGT--TGTAAAGTTTGTGAGATGTTGCTCCTACCATCCATT
ATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATGATGT----TGTGTTGTGGTTGTTATAGTTGAGGGTCAAAA
GTAGGGGT-TAGCTTTAGCATGATTCGCTAGTGCTTTCATCACAGAACACATTCTTTGAAAAGGGGATATTCTGAAGTCG
ATGCTTTCTCGGGATGGGAAT---AATAGTCTGAAATACACATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGT
TTAATGTC----TATGCTGTTGTGCGGCTGTTATGTGTGTCTATGTCGGTGAGCTTGTGTTATGCACTTCTGCGTTTTGA
TGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGT
>chr4A_2851
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-------------AATCTTGTGGCCATGGTAGGTCATGTCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTA
GTTTCTTGATTGATTGGCATTTATAGTTGTGCACTCACCTTAACTAATCTTGTATTTGTAGTTGAGGAACAATCTGCTAC
CATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTGTTA--------------------------------------T
ATTTAAGCAAGTTCTTATAGTGATAATGTTGTTTATATATGT--TGTAAAGTTTGAGAGATGTTGCTCCTACCATCCATT
ATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATGATGT----TGTGTTGTGGTTGTTATAGTTGAGGGTCAAAA
GTAGGGGT-TAGCTTTAACATGATTCGCTAGTGCTTTCATCACAGAACACATTCTTTGAAAAGGGGATATTTTGAAGTCG
ATGCTTTCTTGGGATGGGAAT---AATAGTCTGAAATACACATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGT
TTAATGTC----TATGCTGTTGTGCGGTTGTTATGTGTGTCGATGTCTGTGAGCTTGTGTTATGCACTTCTGCATTTTGA
TGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGT
>SNPs
-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS---------S---------
-----------------------------------------S--------------------S---------S--S-S--
---------------------------------------------S------S---SS--S------S-SS---------
S----------S--S---S----S-S----------S--S-----------------------S-------S--------
-----------------------------S-----------------S-------S-----------------S------
----------S---SSSSSSS--------------S---------------------S----------------------
-SS-S-S---------S---S------------------S----------------------------------S-----
-------S--------SS---S-------S---------------------------------------S-S--------
---S---SS---------------S-------------------------------------------------------
-------------------------------SSS----------------------------------------------
-----------------------------SSSSSSSSSSSSSSSSSSSS-------------------------------
-------------------------------------------------------------S-S----------------
------------------------------------------------------S-------------------------
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-S------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-------------------------S-----------------S------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
---S------S---------------------------------------------------------------------
--------------------S-----------------------------------------------------------
------------------------------------------------S-------------------------------
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-----------------------------------------------S------------------------------S-
---------S-----------------------------S-----------S-----------S-----S----------
----------------------------------------S--------------------------------S------
-------------------------------------------------------------------S---S--------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
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------------------------------------------------------------------------------S-
----------------------------------------S-----------------S----------SS-SSSSSSS-
------------------------------------S----------SSSS-----------------------------
-----------------------S----------------------------------------------------S---
--------------------------------------------------------------------------------
-----------S------------------------------SS------------S-----------------------
-----------------------------------------SS-SSSS---S------------------S---------
--------S-----------------------------------------------------------------------
-----------SSS-S--S--SSS------------------------------------------------S-------
-S------SSSS---------------S----------S-------S--------------S------------------
-----------S-------------S------------
>forward_58
--------------------------------------ATTGGTCATCTGGTGCCACC----------------------
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>reverse_1621
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--------------------CTCCATCATCAAGCCCATCAG---------------------------------------
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>forward_213
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---------------------------------CGCACATCTCAACGGAGGAA---------------------------
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>reverse_2200
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---------------------------------------GATTACAGCGGCAAATGGCA---------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTAAACCGGCCACCACACTC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2224
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AATTGGACTTGGGGCTG
TCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_312
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GCCACCACACTCCAATCGAA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2314
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGAGGAG
CTGTCCAAGGAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_578
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TCAAAAGAGAACGGGCCT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2427
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGGAGATCAGACAGCAGCTG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_582
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AAAAGAGAACGGGCCTGGTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
CTTTGTGCTGGGCCTTTT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
