>input_sequence_50628
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------------------------------------------ATGAACATGAGAAGGATGCCAGGACATCTCCATTGCAG
CGTCAAGAATGTCAGGATAATGGGCTTCTGCTCTGCAAAGAGCATGGCCGAACTAACCTGCCATATTCTTGAGAATGCGA
CTGCACTCGAGCGCCTTACCTTGGACGCCATATACGACAATAGTAGTTATGGAGACGCTGAAAGATGTTGTGTCGGGGAA
AAA---GGTGAATGCAACCCGAAAAGCAGGAGTATGATCATGCACGCCCACAAAGGGCTGGGGGTTATTGGTAAATATGT
CGTGGAGAAAGTTCCCTCCACGGTTCAGTTGAGTGTGAAGAAGCTCTGCAGCCGTTGCCATAAAATCAAATCCAAGGGGT
TTAGGTATGGTAATCGGACTACCACTCCCTAGCGTCCTATCGGG----------------CGTTGAATGGGAGCTTCCCC
TTGAGAATGCTTTG-------------------GTCT--TAGTTAATTTTGATTTGTTTCCTAGTATTTGTTTCTTAGAA
TCACGTCCGGTCTCCTTTTCAAGAACAAATGAGGCTATTTTGAAAATAATTTTGTAAATTATGTTTTTTCTTAATGAATA
AT-------------------TTATTTAG---------------------------------------------------
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----TAAGATATG-CTTTCCATGATGGAAGCATGTTTTTGTGCACTGGAAGCATTC--TTTTTTTTGACAAGACCAACCG
TTTTATCATAAAAAGACATGGATTGAACGAAATTTTATATTATCTCATGGAGGAAAGTTAGTTCTCCTCAAGTCTATGTT
GTTCAAGCTATTTT-ACATATGCTATGTCTGCTTAATCCTTAAAGAAACTCGCAAAGGAATCTTTGAT------------
-------GGGGTGACGAGGACAAACAAAAGAGGACG--CTGGATGACTTGGTGAAAGATATGTGTCAAAAACTCAA-GGA
GTGGTGGATTTTCATGATATCTATTGTTTCAATTTGGCGGCGTTTCATAAACAAGTGTGGTGTCTCCTCGAGGACCCAGA
CTCTCTTACTGCCACAGTCTTGAGAGCCAAGTATTTTTTCGGAAGGTGATATGTTGAATGCAAAACTAAAAAAAGGCCAA
GTATTATGCGGGAGTCAATTTCCGAAGCATGGTTAAATAATACTAGTAGTTGGGAAGATGCGTGGATCCCAAATTGTGTT
GATAGAAGAGTTATCATTTGTTGATCCTGCTATGGGATTAATTTTTTTTTGAGACAATGCTATGGGATTAATAGGAACTA
TTGTTTTTTATGGGCCAAAGCCCATCTATAATTCAACACTTATTACTCCTCGATGTTTTTTATGGGCCAACTCATTCGCG
GTTTGTTTTGTCGGACCTAAGTACCTGACAGTTTAGCTAAAAAAATTACCTGACAGTTTGGAAGCTTGACGTCTTGTGTG
CCAACTGCCAGCAGAGTCTGAACTCTTGGGGCTTGCAGTTTTGCACTTCGAGCCTTTAGTAGACATTACCCTAACTGGCC
TTATGAAGGGTTGTTTGAAATGGGTGTATTTTGTGTGGCCATCGGTATTTAG----------------------------
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>chr5A_1_TraesCS5A01G264200
TGAAGAGGTCAAACTTTCAATGCCTCTAGGACGCACCGCGGTTCGTTACAAGTTCCCATGCCCGGTTTTATCCAACGGGA
GTGGAAACTCGATTCGACATCTTCACCTCAGCCGTTGCGCCTTCCATCCCACGGTCGGGCTTCGTTGCTTGACAAGGCTG
TTTCTGTTGGAGGTGCACATCACGAGA-GATGAGTTAGGGCACCTTCTGTCCAATTCTCTTGCTATGGAAGAGTTGTGTC
TCAATAGTTGTCATAAGATAATTCGCCTCAAGATATCTTGCCTGCTACATCGGTTCAGCTGCCTGTCAGTGTTTCATTGC
AAGTCTCTGGAAGTGATAGAGAATAGAGCTCCAAATCTTTGCTTTGTTCGCATTGATGGTGCTGTAGAGAAACTTCCGGT
TGGAGATTTATTGCAAATGAAGAGACTACACATGTTGGATTACTACGAATCTGACCTTGTTCATGATGCTCGTTCCAAGC
TTCCATTCATTATGCCAAATCTTGAAACCCTCAACCTATCTTCGGCTGGAGAGGTATATTCTCAAACTTTAGTTTT-CCC
--------ATTATTGTTTT--TGCAAGGATGACTAGCAGTAGATTTGATTGTCAGAGACAGGTATTGTTTCATATATATA
TATAGCTGTAGTCGTGC------CATTGAATATGTT-TAACCTTTTTTA-AGGGAAGAAA----GTATTTAACCAAG---
-----ATCTATATGCAGATGTTTAATACACCAATCTTAACTGTCAGATTCCTCTTCCTGAAGAACCTGCTGATTGATCTT
AATGCAGAT----AGGGGGGCTTTTCCCCATCCTATGATTATTTTTCTCTAGCTTATTTCCTGGATGCTTGTCCTGTTCT
GGAGAAGTTTGTCTTGGGTGTAAGTCACTTCTCCTCTA------------------------------------------
----------------------------------------------------------------------------GCTT
GCAACCATGATATCAAGTATCTGCAT--GCTGTGGAACCATTTAACTC------GTGTGTTGCTCCTATGGATGCAGGTA
TCACAGACTCGAGTAAAGCATGAACTGATTTCTGATGGATACATGAACATGAGAAGGATGCCAGGACATCTCCATTGCAG
CGTCAAGAATGTCAGGATAATGGGCTTCTGCTCTGCAAAGAGCATGGCCGAACTAACCTGCCATATTCTTGAGAATGCGA
CTGCACTCGAGCGCCTTACCTTGGACGCCATATACGACAATAGTAGTTATGGAGACGCTGAAAGATGTTGTGTCGGGGAA
AAA---GGTGAATGCAACCCGAAAAGCAGGAGTATGATCATGCACGCCCACAAAGGGCTGGGGGTTATTGGTAAATATGT
CGTGGAGAAAGTTCCCTCCACGGTTCAGTTGAGTGTGAAGAAGCTCTGCAGCCGTTGCCATAAAATCAAATCCAAGGGGT
TTAGGTATGGTAATCGGACTACCACTCCCTAGCGTCCTATCGGG----------------CGTTGAATGGGAGCTTCCCC
TTGAGAATGCTTTG-------------------GTCT--TAGTTAATTTTGATTTGTTTCCTAGTATTTGTTTCTTAGAA
TCACGTCCGGTCTCCTTTTCAAGAACAAATGAGGCTATTTTGAAAATAATTTTGTAAATTATGTTTTTTCTTAATGAATA
AT-------------------TTATTTAG---------------------------------------------------
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----TAAGATATG-CTTTCCATGATGGAAGCATGTTTTTGTGCACTGGAAGCATTC--TTTTTTTTGACAAGACCAACCG
TTTTATCATAAAAAGACATGGATTGAACGAAATTTTATATTATCTCATGGAGGAAAGTTAGTTCTCCTCAAGTCTATGTT
GTTCAAGCTATTTT-ACATATGCTATGTCTGCTTAATCCTTAAAGAAACTCGCAAAGGAATCTTTGAT------------
-------GGGGTGACGAGGACAAACAAAAGAGGACG--CTGGATGACTTGGTGAAAGATATGTGTCAAAAACTCAA-GGA
GTGGTGGATTTTCATGATATCTATTGTTTCAATTTGGCGGCGTTTCATAAACAAGTGTGGTGTCTCCTCGAGGACCCAGA
CTCTCTTACTGCCACAGTCTTGAGAGCCAAGTATTTTTTCGGAAGGTGATATGTTGAATGCAAAACTAAAAAAAGGCCAA
GTATTATGCGGGAGTCAATTTCCGAAGCATGGTTAAATAATACTAGTAGTTGGGAAGATGCGTGGATCCCAAATTGTGTT
GATAGAAGAGTTATCATTTGTTGATCCTGCTATGGGATTAATTTTTTTTTGAGACAATGCTATGGGATTAATAGGAACTA
TTGTTTTTTATGGGCCAAAGCCCATCTATAATTCAACACTTATTACTCCTCGATGTTTTTTATGGGCCAACTCATTCGCG
GTTTGTTTTGTCGGACCTAAGTACCTGACAGTTTAGCTAAAAAAATTACCTGACAGTTTGGAAGCTTGACGTCTTGTGTG
CCAACTGCCAGCAGAGTCTGAACTCTTGGGGCTTGCAGTTTTGCACTTCGAGCCTTTAGTAGACATTACCCTAACTGGCC
TTATGAAGGGTTGTTTGAAATGGGTGTATTTTGTGTGGCCATCGGTATTTAGTTCGAACTTAAATTAAATACCGATGGGT
ACAAATAAATTACATCCATTTCAAAGAGGGCCCAAGCCTAAGTCAATCCCTCCCAATCCCGAATGCGACGTATCACTCAT
ACCCCTCTCCCTCGACGCTGGCGAAAAGTGCATGGAGGACATTCTACCCTCTCTCCAGCGCTGGCGAAAAGCACATAGAG
GACATGCTACGTCTTCAGATCTACGCAAAAGTAAATGTCTGCACTCTAATTTACTACTCCCTCTGTTCCTTTTATAAGAC
ATTTAGACAATTCAGATAGCAGAAAACAGGTCAAGCGTCACCTGTCCAAAACGTCTTATAAAAAAGAACAGAGGGAGTGC
ACAAGTGCGTAAAGGAACATCTTAGGGCCCATAGATTAAGTGTAAAATGAGTGTGTTCCCCAATATTTAGCGCAAGTTTG
AACTGAATACTGGGCAGCACATAAAATTTACATCCAATCCAAGCAGGGCATTAGTTAACAGTGATGTCATCAGATATGAG
ATCTTTAACGTGTTGAGATAAAACTAGGATGGCTGTTAATACTCCCTCCATTCACAAATATAATATGTTTTCCATATCTC
AATATGGACTACATGCGAACTGAAATGAGTGAATAAACACAATTAAACATGTCTATATACATCTGATTCATAAAAAATAG
CACATCTTATACTCCCTCTGTTTCTTTTTAGGGAAACGTTGCCTACCGGTGGACCGACCGAAGCTTCGGCCGGTCGCTCG
CGCGCCACTCGATCGCGAAGGGATCTAGCGCTAGGCCAATGTTTTCCGTTGTTTGTTTTTCCTTTCCTCGGCCCACCCAC
GTGCCCTAGGCCCACCATGACTGTTTTTCTTTCTCTCATCCTATCTGGTGCGTCGTACTCTGCCCTCCATTATCTTCTTC
CCCGCGTGGTCGTCTTCAAGTTCCTTCTCCACAAACCGATCGTTGAAAAGCTCCGACATGGGGGTTGGGAAAAGGAGCTG
CAACCGGAGCCC
>chr5A_1
TGAAGAAGTCATACTTTCAATGCCTGCAGGATGCAACACAGTTAATTACGACTTCCCATGCTCAGTTTTACTCAATGGGA
GTGGAAACTCGATTCGACATCTTAACCTCGACCGTTGTGCTTTCCATCCCACAGCGGGACTTGGTTGCTTGACAAGGCTG
CATCTGTATCAGGTGCACATTACGGGA-GATGAGTTAGGACACCTTCTTTCCAACTCTCTTGCTATGGAAGAGCTGAATC
TGAATCGTTGTGACAAGATCATCTGCCTCAAGATACCTTCCCTGCTACATCGGCTCAACTGCCTGACAGTGTTTCGTTGC
ACAGCTCTGGAAGTGATAGAGAATAAAGCTCCAAATGTTTGCGCTGTTCACATTGATGGCGCCCTAGAGAAACTTCCAGT
TGGAGATTTATTGCAAGTGAAAGAACTACAAATGCTGCATGTCGATGAATCTAACCTTGTTCATTATGCTCGTTCCAAGC
TTCCATTCATTATGCCAAATCTTGAATTCCTCAGCGTATGTTCGGCTGAAGAGGTATATTCTCAAACTTCAGTTTT-TCC
--------TTTATTG-TTT--TGAAAGGATGGCTAGCAGTACATTTGATTGTCAGATGCAGGCACTATTC---------A
TATAGCAGTAGTCGTGT------CATGGAATATGTT-TAACCTTTTT-T-AGGGAAGAA-----GTATTTAACCTAGACC
TATTCATCTATATGCAGATGTTCAGTACGCCACTCTTAGCTGTCAAACTCCTGTACCTTAAGAACCTGCAGATCTTTCTT
GATGATGGACAGCTGGGGGGATTTTCGCCAGCCTATGATTATTTTTCTCTAGCTTATTTTCTGGATGCTTGTCCTGTCCT
GGAGAACTTTATCTTGGGTGTAAGTCACTTCTCCTCTACTACTTATGTTCCTAAATGTAAGACGTTTTGGCAGTTTAATT
TAAA------------------------------------CTGCCAAAACGTCTTATATTTAGGAACCGAGGGTGTGCTT
TCAACTATGATATCTAGTCTCTGCAT--GCTGTCGAACCATTTAACTCTAGCGTGTGTTGTGTTCCTATGGATGCAGGTA
TTACAGACTCGAGTAAAGCATGAATTGATTTCTGCTGGAGACTCAAGCATGAGACGGATACCAGGACATCAGTATCGCAA
CATGAAGAATGTCAGTATAATGGGCTTCTGCTCTGCAAAGAGCATGGTCGAACTAACCTGCCATATTCTTGAGAATGCAA
CTTCACTCGAGTGCCTTATGTTGGACACTGTATACGATAATCGG------GAAGACACTGATGGATGTTGTGTCAAGGGA
TCTTCTGGTGAATGCCGCCCGATAGGCAGGAGTATGATCATGCACGCCCACAAAGGGCTATGGGCTATTGAAAAATATGT
TGCGGAGAAAGTTCCATCCACAGCCAAGTTAAATGTTAAGAAGCTATGCAGCCGCTGCCATAAAATTAAAT---------
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>chr5D_1
TGAAGAGGTCAAACTTTCAATGCCTCTAGGACGCACCGCGGTTTATTACGAGTTCCCATGCCCGGTTTTATCCAACGGGA
ATGGAAACTCGATTCGACATCTTCACCTCAGCCGTTGCGCCTTCCATCCCACGGCCGGGCTTGGTTGCTTGACAAGGCTG
TTTCTGTTGGAGGTGCGCATCATGGGAGGATGAGTTAGGGCATCTTCTGTCCAGTTCTCTTGCTATGGAAGAGTTGTGTC
TCAATAGTTGTGATAAGATAATTCGCCTCAAGATATCTTGCCTGCTAAATCGGTTCAGCTGCCTGTCAGTGTTTCATTGC
AAGTCTCTGGAAGTGATAGAGAATAGAGCTCCAAATCTTTGCTTTGTTCGCATTGATGGCGCCGTAGAGAAACTTCCGGT
TGGAGATTTATTGCAAATGAAGAGACTGCACATGTTGGATTACTACGAATCTGACCTTGTTCATGATGCTCGTTCCAAGC
TTCCAT-CATTATGCCAAATCTTGAAACCCTCAACCTATCTTCGGCTGGATTGGTATATTCTCAAACTTTAGTTTT-CCC
--------ATTATTGTTTT--TGCAAGGATGGCTAGCAGTAGATTTGATTGTCAGAGACAGGTGTTGTTTCA----TATA
TATAGCATCAGTCGTGC------CATTGAATATGTT-TAACCTTTTT-A-AGGGAAGAAA----GTATTTAACCAAG---
-----ATCTATATGCAGATGTTCAATACGCCAATTTTAGCTGTCAAATTCCTCTTCCTGAAGAACCTGCAGATTGATCTT
AATGATGGACAGACGGGGGGCTTTTCCCCATCCTATGATTATTTTTCTCTAGCTTATTTCCTGGATGCTTGTCCTGTTCT
GGAGAAATTTGTCTTGGGTGTAAGTCACTTATCCTCTA------------------------------------------
----------------------------------------------------------------------------GCTT
GCAACCACGATATCAAGTATCTGCAT--GCTGTGGAACCATTTAACTC------ATGTGTTATTCCTATGGATGCAGGTA
TCACAAACTCGAGTAAAGCATGAATTGATTTCTGATGGAGACTCGAACATGAGACGGATGCCAGGACATGTCCATTGCAG
CGTCAAGAATGTCAGGATAATGGGCTTCTGCTCTGCAAAGAGCATGGTCGAACTAACCTGCCATATTCTTGAGAATGCAA
CCTCGCTCGAGCGCCTTACGTTGGACGCCGAATACGACAATAGTAGTTATGGAGACGCTGAAAGGTCTTGTGTCGGGAAA
AAA---GGTGAATGCAACCCGAAAAGCAGGAGTATGATCATGCACGCCCACAAAGGGCTGGAGGTTATTGGTAAATATGT
CTTGGAGAAAGTTCCCTCCACGGTTCAGTTGAGTGTAAAGAAGCTCTGCAGCCGTTGCCATAAAATCAAGCCCAAGGGGT
TTAGGTATGAGTATCGGACTACCAATCCATAGCGTCCTATCGGG----------------CGTTGAATGGGAGCTTTCCC
ATGAGAACGTGCGTCGTACCCTGGTCGTAGTTAGTCT--TAGTTAATTTTGATTTGTTTCCTAGTATCTGCTTCTTAGAA
TCACGTCCGGTCTCCTTTTCAAGAACAAACCAGGCTGTTTTGAAAATAATTTGGTAAATTATCTTTTCTCCTAATGAATA
AT-------------------TTATGGGAAACTCTTACCATCACCCGGTGGATCTCAGCGGCTGCGTCCGCCACCTTCCT
TACGTGACATGTGTCTAAGTGAAGGCCCGCATACCGTCCTTCGTCGAACTCGGTTCTGCAACTGAAGCTATGCTTCTGAA
ACATATGCGATGTTGCAATGGTCTACGGTGGGTCTACGTTTTGCAACAAAACTTCCTTTGCGAATTTTTTCTGCAATAAG
ACCTCAGTTGCAAAAAAAAAAAAATTTGCTACAAAATCTCAGTTGCAAAAAAATTGCAACAAAACAGTTGTTGCAAAAAA
AACTGCAGCAAGATTTGTGTTGCTGAAATAATTCTCCAACAAGACCTATGTTGCAATGCTAGAGGCACGCTCAGGTTCTT
GATGCAGTAAATCTGACGGCTCGCGACACGGCTTATCTTTTGAAAAAACCAGTCGGCGGACGCGTAGCACGTCCCATAAT
TTATTATGATATG-TTTTCCATGATGGAAGCATGTTTTTGTGCAATCGAATCATTCTTTTTTTTTTGACAATACCGATTG
TTTTATCATAAAAATCAGTGGATGGAATGAAAT-TTATATTATCTCATGGAGGAAGGGAAGTTCTCCTCAAGTC--TGTT
GTTCAAGCTATTTTTACATGTGCTATGTCCGCCTGATTCTTAAAGAAACTCGAAAGGAATCACTGGCATAATGTCGCATT
TCTGATGGGGGTGACAAGGATAATCAAAAGAGGATGCACTGGATGGCTTGGTAAAAAATACGTGCCCAAAAACTCATGGA
GGGATGGATTTTTGTGATATCTATTATTTCAATTTGGCAGTGATGCATAAACAAGTGTGGTGTCTTCTTGAGGACCCAGA
TTCTTTA-------------------------------------------------------------------------
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>chr5D_1
TGAAGAAGTCATACTTTCAATGCCTGCAGGATGCAACACAGTTAATTACGACTTCCCATGCTCAGTTTTACTCAATGGGA
GTGGAAACTCGATTCGACATCTTAACCTCAACCGTTGTGCTTTCCATCCCACAGCGGGACTTGGTTGCTTGACAAGGCTG
CAACTGTATCAGGTGCACATTACGGGA-GATGAGTTAGGACACCTTCTTTCCAACTCTCTTGCTATGGAAGAGCTGAATC
TGAATCGTTGTGACAAGATCATCTGCCTCAAGATACCTTCCCTGCTACATCGGCTCAACTGCCTGACAGTGTTTCGTTGC
ACAGCTCTGGAAGTGATAGAGAATAAAGCTCCAAATGTTTGCGCTGTTCACATTGATGGCGCCCTAGAGAAACTTGCAGT
TGGAGATTTATTGCAAGTGAAAGAACTACAAATGCTGCATGTCGATGAATCTAACCTTGTTCATTATGCTTGTTCCAAGC
TTCCATTCATTATGCCAAATCTTGAATTCCTCAGCGTATGTTCGGCTGAAGAGGTATATTCTCAAACTTCAGTTTT-TCC
--------TTTATTGTTTTGATGAAAGGATGGCTAGCAGTACATTTGATTGTCAGATGCAGGCACTATTC---------A
TATAGCAGTAGTCGTGT------CATGGAATATGTT-TAACCTTTTT-T-AGGGAAGAA-----GTATTTAACCTAGACC
TATTCATCTATATGCAGATGTTCAGTACGCCACTCTTAGCTGTCAAACTCCTGTACCTTAAGAACCTGCAGATCTTTCTT
GATGATGGACAGCTGGGGGGATTTTCGCCAGCCTATGATTATTTTTCTCTAGCTTATTTTCTGGATGCTTGTCCTGTCCT
GGAGAACTTTATCTTGGGTGTAAGTCACTTCTCCTCTACTACTTATGTTCCTAAATGTAAGACGTTTTGGCAGTTTAATT
TAAACCTAAATGTAAGATGTTTTTGGCAGTTTAATTTAAACTGCCAAAACGTCTTATATTTAGGAACAGAGGGTGTGCTT
TCAACTATGATATCTAGTCTCTGCAT--GCTGTCGAACCATTTAACTCTAGCGTGTGTTGTGTTCCTATGGACGCAGGTA
TCACAGACTCGAGTAAAGCATGAATTGATTTCTGCTGGAGACTCAAGCATGAGACGGATACCAGGACATCAGTATTGCAA
CATGAAGAATGTCAGTATAATGGGCTTCTGCTCTGCAAAGAGCATGGTCGAACTAACCTGCCATATTCTTGAGAATGCAA
CTTCACTCGAGTGCCTTATGTTGGACACTGTATATGATAATCGG------GAAGACACTGATGGATGTTGTGTCGAGGGA
TCTCCTGGTGAATGCCGCCCGATAGGCAGGAGTATGATCATGCACGCCCACAAAGGTCTATGGGCTATTGAAAAATATGT
TGTGGAGAAAGTTCCATCCACAGCCAAGTTAAATGTTAAGAAGCTATGCAGCCGCTGCCATAAAATCACAT---------
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>chr5B_1
TGAAGAGGTCAAACTTTGAATGCCTCTAGGATGCACCATGGTTCATTACAAGTTCCCATGCCCGGTTTTATCCAACGGGC
GTGGAAACTCGATTCGACATCTTCACCTCAGCCGGTGCGCCTTCCATCCCACGGCCGGGCTTGGTTGCTTGACAAGGCTG
TTTCTGTTGGAGGTGCGCATCACGGGA-GATGAGTTAGGGCACCTTCTGTCCAATTCTCTTGCTATGGAAGAGTTGTGTC
TCAATAGTTGTGATACGATAATTCGCCTCAAGATATCTTGCCTGCTAAATCGGTTCAGCTGCCTGTCAGTGTTTCATTGC
AAGTCTCTGGAAGTGATAGAGAATAGAGCTCCAAATCTTTGCTTTGTTCGCATTGATGGCGCCGTAGAGAAACTTCCGAT
TGGAGATTTATTGCAAATGAAGAGACTACACATGTTGGATTACTACGAATATGACATTGTTCATGATGCTCGTTCCAAGC
TTCCATTCATTATGCCAAATCTTGAAACCCTCAACCTATCTTCGGCTGGAGAGGTATATTCTCAAACTTTAGTTTT-CCC
--------ATTATTGTTTT--TGCAAGGATGGCTAGCAGTAGATTTGATTGTCAGAGACAGGTGTTGTTTCA----TATA
TATAACAGCAGTCGTGC------CATTGAATATGTT-TAACCTTTTT-A-AGGGAAGAAA----GTACGTAACCAAT---
-----ATCTATATGCAGATGTTCAATACGCCAATTTTAGCTGTCAAATTCCTCTTCCTGAAGAACCTGAAGATTGATCTT
AATGATGGACAGATGGGGGGCTTTTCCCCATCCTATGATTATTTTTCCCTAGCTTATTTCCTGGATGCTTGTCCTGTCCT
GGAGAAGTTTGTCTTGGGTGTAAGTCACTTCTCCTCTA------------------------------------------
----------------------------------------------------------------------------GCTT
GCAACCATGGTATCAAGTATCTGCATATGCTGTGGAACCATTTAACTC------GTGTGTTGCTCCTATGAATGTAGGTA
TCACAGACTCGAGTAAAGCATGAATTGATTTCTGATGGAGACTTGAACATGAGACAGATGCCAGGACATCTCCATTGCAG
CGTCAAGAATGTCAGGATAATGGGCTTCTGCTCTGCAAAGAGCATGGTCGAACTAACCTACCATATTCTTGAGAATGCAA
CCTCGCTCGAGCGCCTTACGCTGGACACCATATACGACAATAGTAGTTATGGAGATGCTGAAAGGTCTTGTGTCGGGAAA
ATA---GGTGAATGCAACCCGAAAAGCAGGAGTATGATCATGCACGCCCACAAAGGGCTGGGGGTTATTGATAAATATAT
CGTGGACAAAGTTCCCTCCACGGTTCAGTTGAGTGTGAAGAAGCTCTGCAGCCGTTGCCATAAAATTAAGTCCAAGGGGT
TTAGGTATGAGTATCGGACTACCACTCCCTAGCATCCTATCGAACGTCTGTTGTACGGTACGATGAATGGGAGCTTCCCA
TTGAAAATGTGCGTCTTACCCTGCTCGTGGATGTTAGGCTAGTTAATTTTGGTTTGTTTCCTGGTATTTGCATCTTAGAA
TCATGCACGGTCTCCTTTTCAAGAACAAGGTGGGCTGTTTTGAAAATAATTTGGTAAATTATGTTTTTTCCTAATGAATA
ATCAATAAATTTAATTATGGTTTATTTAG---------------------------------------------------
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----TCAGATCTGTTTTTCCATGATGGAATCATGTTTTTGTGCAATGGAAGCATTC----TTTTTCGACAAGACCAA---
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>chr5B_1
TGAAGAAGTCATACTTTCAATGCCTGCAGGATGCAACACAGTTAATTACGACTTCCCATGCTCAGTTTTACTCAATGGGA
GTGGAAACTCGATTCGACATCTTAACCTCGACCGTTGTGCTTTCCATCCCACAGCTGGACTTGGTTGCTTGACAAGGCTG
CAACTGTATCAGGTGCACATTACGGGA-GATGAGTTAGGACACCTTCTTTCCAACTCTCTTGCTATGGAAAAGCTGAATC
TGAATTGTTGTGACAAGATCATCTGCCTCAAGATACCTTCCCTGCTACATCGGCTCAACTGCCTGACAGTGTTTCGTTGC
ACAGCTCTGGAAGTGATAGAGAATAAAGCTCCAAATGTTTGCGCTGTTCACATTGATGGCGCCCTAGAGAAACTTGCAGT
TGGAGATTTATTGCAAGTGAAAGAACTACAAATGCTGCATGTCGATGAATCTAACCTTGTTCATTATGCTCGTTCCAGGC
TTCCATTCATTATGCCAAATCTTGAATTCCTCAGCGTATGTTCGGCTGAAGAGGTATATTCTCAAACTTCAGTTTT-TCC
--------TTTATTG-TTT--TGGAAGGATGGCTAGCAGTACATTTGATTGTCAGATGCAGGCACTATTC---------A
TATAGCAGTAGTCGTGT------CATGGAATATGTT-TAACCTTTTT-A-AGGGAAGAA-----ATATTTAACCTAGACC
TATTCATCTATATGCAGATGTTCAGTACGCCACTCTTAGCTGTCAAACTCCTGTACCTTAAGAACCTGCAGATCTTTCTT
GATGATGGACAGCTGGGGGGATTTTCGCCAGCCTATGATTATTTTTCTCTAGCTTATTTTCTGGATGCTTGTCCTGTCCT
GGAGAACTTTATCTTGGGTGTAAGTCACTTCTCCTCTACTACTTATGTTACTAAATGTAAGGCGTTTTGGCAGTTTA---
---------------------------------ATTTAAACTGCCAAAACGTCTTATATTTAGGAACAGAGGGCGTGCTT
TCAACTATGATATCTAGTCTCTGCAT--GCTGTCGAACCATTTAACTCTAGCGTGTGTTGTGTTCCTATGGATGCAGGTA
TTACAGACCCGAGTAAAGCATGAATTGATTTCTGCTGGAGACTCAAGCATGAGACGGATACCAGGACATCAGTATCGCAA
CATGAAGAATGTCAGTATAATGGGCTTCTGCTCTGCAAAGAGCATGGTCGAACTAACCTGCCATATTCTTGAGAATGCAA
CTTCACTCGAGTGCCTTATGTTGGACACTGTATACGATAACCGG------GAAGACACTGATGGATGTTGTGTCAAGGGA
TCTTCTGGTGAATGCCGCCCGATAGGCAGGAGTATGATCACGCACGCCCACAAAGGGCTATGGGCTATTGAAAAATATGT
TGCGGAGAAAGTTCCATCCACAGCCAAGTTAAATGTTAAGAAGCTATGCAGCCGCTGCCATAAAATTAAAT---------
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>chr7B_1
TGAAGAAGTCAAACTTTCAATGCCTCTAGGATGCAACGCAGTTTATTACGGCTTCCCATGCTCAGTTTTATTCAGTGGGA
GTGGAAACTCAATTCGACATCTTCACCTTAGCCGTCGTGCCTTCCATCCCACGGCAGGACTTGGTTGCTTGACAAGGCTC
CATCTGTCTCAGGTGCACATCACGGGA-GATGAGTTAGGGCACCTTCTGTCCAATTCTCTTGCTATGGAGGAGCTGACTC
TCAATGGTTGTGGTAAGATCATTCACCTCAAGATATCTTGCCTGCTACATCGGCTCAACAGCCTGTCAGTGTTTAATTGC
ACAGCTCTGCAAGTGATAGAGAATAAAGCACCAAATGTTTGCCTTGTCCGCATCGATGGCGCCCTAGAGGAACGTCTGGT
TGGAGATTTGTTGCAGGTGAAGGAACTGCAAATGTTGGATTACTACGAATGTGACCTTGTTCATTATGCTTGTTCCAAGC
TTCCATTCATCATGCCAAATCTTGAAACCCTCGGCCTATCTTCGGCTGGAGAGGTATATTCTCAAACTTTGGGTTTTTCC
ATTTATTATTTATTGTTTT--TGGAAGGATGACCGGCAGTAGATTTGATTGTCAGATGCAGGCATTATTTTGTG------
-ATAGCAGTAGTCGTGC------CATTGGTTAAGTT-TAACCTATTT-TTAGGGAAGAAA----GCATTTAACCTAG---
-----ATGTGTGTGCAGATGCTCAGCACACCAATCTTAGCTGTCAAATTCCTCTACCTGAAGAAGCTGCGGATTGATCTT
AATGATCTACAGATGGGGGGCTTTTCCCCAGCCTATGATTATTTTTCTCTAGCTTATTTCCTGGATGCGTGTCCTGTCGT
GGAGAAGTTTGTGTTGGGTGCAAGTCACTTGTCCTCTA------------------------------------------
----------------------------------------------------------------------------GCTT
GCAACCATGATATCAAGTATCTGCAT--GGTGTGGAACCATTTAACTCTAGCATGTGTTTTGTTCCTATGGATGCAGGTA
TCACAGACTCGAGTAAAGCATGAATTGATTTGTGATGAAGACTCGAACATGAGACAGATGCTGGGACATCGCCATTGCAA
CCTCAAGAACGTCAGGATAATGGGCTTCTGCTCTGCAAAGAGCATGGTCGAACTAACTTGCCATATTCTTGAGAATGCAA
CTTCACTCGAGCGCCTTACGTTGGACGCCATATACGATAATAGTAGTTATGGGGACGCTGATAGGTCTTGTGTCGGAAAA
AAG---GGTGAATGCAACCCAAAAAGCAGGAGTATCATCAAGCACGCCCACAAAGGGCTGTGGGCAATTGGTAAATATGT
CGTGGAGAAAGTTCCCTCCACGGTTCAGTTAAGTGTGAAGAAGCTCTGCAGCCGTTGCCATAAAATTAAAT---------
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>chr5A_3
--AAGAAGTCATACTTTCAATGCCTGCATGATGCAACACAGTTAATTACGACTTCCCATGCTCAGTTTTACTCAATGGAA
GTGGAAAATCGATTCGACATCTTTACCTCAACCGTTGTGCCTTCCATCCCACAGCGGGACTTGGTTGCTTGACGAGGCTG
CAACTGTATCAGGTGCACATTACGGGA-GATGAGTTAGGGCACCTTCTTTCCAACTCTCTTGCTATGGAGGACCTGAATC
TGAATCGTTGTGACAATATCATCTGCCTCAAGATACCTTCCCTGCTACATCGGTTCAACTGCCTGACAGTGTTATGTTGC
ATAGCTCTGGAAGTGATAGAGAATAAAGCTCCAAATGTTTGCATTGTTTACATTGATAGCGCCCTAGAGAAACCTCCAGT
TGGAGATTTATTGCAAGTGAAAGAACTACACATGCTGGATGTCGATGAATCTAACCTTGTTCATTATGCTTGTTCTAAGC
TTCCATTCATTATGCCAAATCTTGAATTCCTCAGC-TATGTTCGGCAAAAGAGGTATATTCTCAAACTTTAGTTTTTTCC
--------TTTATTGTTTTGATGAAAGGATGGCTAACATTACATTTGATTGTCAGACGCACACACTATTC---------A
GGTAGCAGTAGTTGTGTTATATGCATGGAATATGTT-CAACCTTTTT-T-AGTGAAGAAA----GTATTTAACCTAGACC
TATTCATCTATATGCAGATGTTCAGTATGCCACTCTTAGCTGTCAAACTCCTGTATCTCAAGAACCTGCAGATTTTTCTT
GATGATGGAGAGATGGGGGGCTTTTCCCTAGCCTATGATTATTTTTCTCTAGCTTATTTTCTGGATGCCTGTCCTGTCCT
GGAGGACTTTGTCTTGGGTGTAAGTCACTTCTCCTCTA------------------------------------------
----------------------------------------------------------------------------GCTT
TCAACTATGATATCTAGTCTCTGCAT--GCCGTTGATCCATTTAACTCTAGCGTGTTG----------------------
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>chr5B_46
---------------------------------------------TTACAACTTCCCCTGCTCAGTTTTTTCCAACGGGA
GTGGAAACTCGATTCGACATCTTCACCTCGCCAGTTGTGCCTTCCACCCTGTTGCCGGACTTGCTCACTTGACAAGGCTG
CATCTGTTTAAGGTGGACATTACAGGA-GATGAGTTAGGGTGCTTCCTTTCTAATTCTTTTGCTATGGAGGAGCTGAATC
TCACTAAATGCGGTAACGTCATTCACCTGAAGATACCTTGCCTGCTACACAGGCTCAACTGCCTGGCGGTGCTGCAGTGC
GTAGCTCTAAAAGTGATAGAAAATAAAGCTCCAAATCTTTGGATTGTTCGCATCGATAGCCAACCAGAGAAAGTTCCAGT
TGGAGATGTACTGCAAGTGAAGGACCTCCAAATGCAGGATTGTTACGAATCTAACCTTGTTCATTATGCTCGTGCCAAGC
TTCCATCCATTATGCCAAATCTTGAAACCCTCAGCCTAGAATCGACCGGGGAGGTAAAAATCCCCAAGTTTTTTTT-TTC
--------ATTAGTA-CTT--TGAAAGGATGGCTAGCAATAGATTTCAT-------------------------------
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>chr1B_618
T-------------------------------------------------------------------------------
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--------------------------------------------------------------CATTATTC---------A
TATAGCCGTAGTTATGC------CATGAAATATAGCATAACCTTTTT-T-AGGCAATAGTATATATATTTAACATAGACG
TATC-----ATATGCAGGACTTCAGTACGCCCATCTTACATGGCAAATTCCACTGCCTCAAGAACTTAGAGATTGATTTT
GACCATGAAGGACAGGGGGGCTTTTCTCCAGGCTATGATTATTTCTTTCTAGTTAGTTTTCTGGACGCTTGTCCTCTCGT
GGAGACTTTTGTTTTGGGTGTAAGTCACTTTTCTCCTTCTA---------------------------------------
----------------------------------------------------------------------------GCTT
GCAACAACAACAGTATC------------CTATCTCTGCATGTAACTATAGGGTGCAGGTTGTTCCTTC--ACACAGGTA
TCACAGAGGAACGTAGAGCATGAGTTGATATC---TGAAGACTCGGTGTTGAGACGGATGCCAGGACATCACCATGACAA
CATCAAGGACGTGACCATCATAGGCTTCTGTGCTGCAAAGAGCATGGTCGAACTAACCTGCCATATTCTTGAGAATGCAA
CATCACTTGAGTGTCTCACTTTGGACGCGGTATATGACAATGGTAT---TGAGGAGGATGATCGATCTTGTGTCAACAAA
AGTTACAAGTGCAGCCCTCAGATTGGCAAGCGGATGATTGCTCAAGCCCACAAAGGCCTCTGGGCCATTGGAAGATATGT
TGCGGACAAAGTTCCCTCCACCGTCAAGTCAACTGTCAAGAATTTGTGCGAACGTTGCCAT-------------------
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>SNPs
--------------------------------------------S-----------------------------------
------------------------------------------------------S-------S-----------------
------------------------S-------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------------------------------------------------------S--S-----------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------SSS----
------S----------------------------------------S--------------------------------
----------------------S---------------S------S-----------------------S----------
----SS--S-----------------------------------------------------------------------
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------------------------S--------------S--S-----------S-------------------------
-----------------------------------------------S------------------------------S-
--S----------------S------------------------------------------------------------
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---------SSS--------------------------------------------------------------------
---------SSSSS--------------------------------------------------------S---------
-----------------------------SS-----S---------------S-----------------S---------
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--------------S-----------------------------S--------------------------------SS-
--------------SSSS-----S---S-----S---------------------S-SS---------------SS----
-------------------S---------S--S-S--S--------------S--S-S-SSSS-S-SS------------
---------------S----S--S----------S----------S------S---S---S---S-S----SSSS-----
-S-S--------SS-----------S------------S-S-S-S--------------------S--S-----------
S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_185
--------------------------------------------------------------------------------
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-----GTTGGAGGTGCACATCACGA-------------------------------------------------------
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>reverse_2727
--------------------------------------------------------------------------------
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------TGCGGGAGTCAATTTCCGAA------------------------------------------------------
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>forward_2667
--------------------------------------------------------------------------------
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-------ACTGCCACAGTCTTGAGAGC-----------------------------------------------------
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------------
>reverse_3633
--------------------------------------------------------------------------------
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--------------------------------TCCAATCCAAGCAGGGCATT----------------------------
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------------
