>input_sequence_50618
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----------------TTTTA--AAATTGTGACATTTTGATCTGTTTGTTCCCAGAGAATACT----TTGTTTGCGGAGG
AAATCATCAGCCAGCCATAGCCATGCAGGAAGCGCTCATCTCTCCGGCCAACGCCGACCGCCTCCGCTCGGCCTTCGAGC
TCAAGCCGTACGCCTTCGGGGACCAGCGCCTCTCCTGCTCGCCGCGCTACCTCCCGGGCGGCGACGACGGCCTGTACCGC
TGCTCCTCCCCCTTCAGCCCCAGCCTGGGCTTCTCCTCGCCGTCGCCGCTCGCCACGTCCGTCTCGCTCTCGCCGTCCTC
CTCCGGCTCCCTCGTCGACGACGGCGACTACGACGGCGCGGCCGCCGCCGACGCCACCGGCCACCGGCTCCAGCTCGCGC
GGCTCGCGCTGCAGTACCAGGAGGTGGCCGATCGCTACGAGCTCTGCCTCTCCCACCTCGCCGAGGCAGTCGACGAGGCG
GCCATCCTCCGCCGCGAGAACGCCGAGCTCCGCGTGGCCAACAGCGACCTCGCGCGCCGCGTCGCGCTGCTCGGCGGCAA
GGAGGCCGCCGCCGTCGTCATCGCTGACGAGATACGCCGGTTCCGCCTCGGCGAGCACAAGGGTGCCTCCAAGCAGCGCG
CGCCCGAGAAGCTCGCCGTGCTGCCGAAGAGCATCTCCGTCCGGTCGAATGACTACCTCAAGATGAACCAGGCGACACCG
GCAGCCGCCACGCCGGCCGCATACAACCGCAAGCCGAGCTCGGTGAGTCCCTGCTCCCGCCTCGCCAATTCCGCATAATC
TCCTCCTCTCGAACTGGCATTTGACATTG-----------TGGATCGGCAGCAGCGCGCGTACGCGGGACCGGGAGCGGA
CGGCGGCAAGAAAGGCGAGGAGCAGAAGACGAAGCAGGACGCGGCGGGGGAGCTGGACGTGTACAACCAGGGCATGTTCA
AGACAGAGCTGTGCAACAAGTGGGAGGAGACGGGGGCGTGCCCCTACGGCGATCAGTGCCAGTTCGCGCACGGCGTCTCC
GAGCTCCGCCCCGTCATCCGCCACCCGCGGTACAAGACCGAGGTCTGCCGCATGGTGCTCAACGGCGAGGTCTGCCCCTA
CGGCCACCGCTGCCACTTCCGCCACTCGCTCACGGCCGCCGAGCGCCTCCTCCGCAGCCGTTGAGGCAGTGCGCGTCTCT
TCCGCCACAGTCTGAACCCTTCTTTTACCGTCCCAACTCAAGCCTACGCATACAC-----------GGGAAAATGTACAA
AAA-TACCAACGGCGTAAATAAGATATATGTATTATATAA---GTATAATATAAGAACGTAAATGAAACCGAACGGTAGA
GTTAGTGCCCAGCAGCCCAGGCAATGTGAATATCTGCGTATGCAG------CCGTCTCTCAGGGACTTGTTCATATAC--
----ATTATATATGTCGTCGGTGTTGGTTTTAGGTGACAATTTGTCTCCAAATGTGTTTCGAGGGAACGCGGGAAGATCG
ACATGGTACA----------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G220700
TTGCTTTGTAAGTTTGACCAAGTGTGTATGCAAAACTATGTAGATAAAAAATACCAAATCAATATCAACATATTCATCAT
TAGATATCTTTTTATAATGTATTCAGTCAATACAGGGTTGGAAGAGCAATTTTTTCGAACACATAGAAGCTCGTAGAGGC
AGCGGCCGGACAGTCATTGATGCAGACCAAGCGATACCGACGACCGCAGGCA---AAGCAAATCGCCTTACCAGAGAATA
AACGTC--GATAAGGACCTGTAGAAACCAGAAGACCACA-AAGCCGGCCGAATCCAGAAGGATCCACCGAAAACCTAAGC
CGATCGGATCACGAAAGGCCTTCGAAGACACAGCTCCGCACGCTCTCCTCCGGTGAAAAACACACCAACATGATGTGAAT
AGAGCA-GGAAGAACATTATTCCTACCTCAAGGCAATGCCGCCTTAAACCAAACATAAAGACTCCCTAAGAAAACCTGAA
--AAGGAAAAACACCCATGCCACTGAACGACTGGCCGGGTTTTCAGAACCGTGCATTGACACCTTCTTCTCCCCAATTAT
TTTTTCTATACATTTAGTCAAACTTAGAAAACTATGTGAATTTAGACGCCATCAATCCTTGCATAGGCCAAGGTTACGCT
CTTTTGGGGGGATTTTTTTTAA---TTAGTTGCAGAACTACTACTACTGGCCTAGGTGAAACGGTAAATAGGCAAGGGCA
GGCGCAGGCTAGAGCCACAATGCAACAACCGCGGACACG-------------AGAAGAAGGAGCTCCGGTGCGGGGCGGC
CATCTCGCTGTGGCGGACGTGCGGGCTCCACTGTCTCCTCTGCTCCTGGCATGCTCCCCGCTATATAAACCACAACACAC
GCTGCCTGCACTACACCCGTGTACCCGCCTCCTTCGTCGCCGTC------------------------------CTCTCT
CTCTGCACCTAATCCAGCGCCAA-GAGGTATCACCAACATTCTGGGTTTCTTTTTCAACATCCCGAGTTGAATTTTCCAC
TGCATTTTATGTCGTTTTTTA--AAATTGTGACATTTTGATCTGTTTGTTCCCAGAGAATACT----TTGTTTGCGGAGG
AAATCATCAGCCAGCCATAGCCATGCAGGAAGCGCTCATCTCTCCGGCCAACGCCGACCGCCTCCGCTCGGCCTTCGAGC
TCAAGCCGTACGCCTTCGGGGACCAGCGCCTCTCCTGCTCGCCGCGCTACCTCCCGGGCGGCGACGACGGCCTGTACCGC
TGCTCCTCCCCCTTCAGCCCCAGCCTGGGCTTCTCCTCGCCGTCGCCGCTCGCCACGTCCGTCTCGCTCTCGCCGTCCTC
CTCCGGCTCCCTCGTCGACGACGGCGACTACGACGGCGCGGCCGCCGCCGACGCCACCGGCCACCGGCTCCAGCTCGCGC
GGCTCGCGCTGCAGTACCAGGAGGTGGCCGATCGCTACGAGCTCTGCCTCTCCCACCTCGCCGAGGCAGTCGACGAGGCG
GCCATCCTCCGCCGCGAGAACGCCGAGCTCCGCGTGGCCAACAGCGACCTCGCGCGCCGCGTCGCGCTGCTCGGCGGCAA
GGAGGCCGCCGCCGTCGTCATCGCTGACGAGATACGCCGGTTCCGCCTCGGCGAGCACAAGGGTGCCTCCAAGCAGCGCG
CGCCCGAGAAGCTCGCCGTGCTGCCGAAGAGCATCTCCGTCCGGTCGAATGACTACCTCAAGATGAACCAGGCGACACCG
GCAGCCGCCACGCCGGCCGCATACAACCGCAAGCCGAGCTCGGTGAGTCCCTGCTCCCGCCTCGCCAATTCCGCATAATC
TCCTCCTCTCGAACTGGCATTTGACATTG-----------TGGATCGGCAGCAGCGCGCGTACGCGGGACCGGGAGCGGA
CGGCGGCAAGAAAGGCGAGGAGCAGAAGACGAAGCAGGACGCGGCGGGGGAGCTGGACGTGTACAACCAGGGCATGTTCA
AGACAGAGCTGTGCAACAAGTGGGAGGAGACGGGGGCGTGCCCCTACGGCGATCAGTGCCAGTTCGCGCACGGCGTCTCC
GAGCTCCGCCCCGTCATCCGCCACCCGCGGTACAAGACCGAGGTCTGCCGCATGGTGCTCAACGGCGAGGTCTGCCCCTA
CGGCCACCGCTGCCACTTCCGCCACTCGCTCACGGCCGCCGAGCGCCTCCTCCGCAGCCGTTGAGGCAGTGCGCGTCTCT
TCCGCCACAGTCTGAACCCTTCTTTTACCGTCCCAACTCAAGCCTACGCATACAC-----------GGGAAAATGTACAA
AAA-TACCAACGGCGTAAATAAGATATATGTATTATATAA---GTATAATATAAGAACGTAAATGAAACCGAACGGTAGA
GTTAGTGCCCAGCAGCCCAGGCAATGTGAATATCTGCGTATGCAG------CCGTCTCTCAGGGACTTGTTCATATAC--
----ATTATATATGTCGTCGGTGTTGGTTTTAGGTGACAATTTGTCTCCAAATGTGTTTCGAGGGAACGCGGGAAGATCG
ACATGGTACAATAAAGTCAGTGAGAGTGT---------ATTGGCGAACTGGCAAGTCCTGCGAAGTTGAGGTGACACGGA
TGTCTTCTTGTTTGTATTCTATGATGAGA--AGCAGTAGATCTTGTATAGCAGCTCTATTGCTTTCTTCAGATTACCTTG
TTGCTCTTGCAATTTTTCTTCGTAATGTCAGTCATTTTTGCAGTATAATTAAGTTGGCATCTTTCTCAGTCCCAACAAAA
GTTCCCGATTTGTCCCCAAAACCTCTGTTGTCTGTAAATCTT-AGTTATCGATGAATGGATAACTCTTTACTCCGCTGTG
TCTTACTGTCTCTTTGTATGACTTTTCGGATGTACTCTTGGGAA-TCAGAAAGCTGCTACGT-------TTCGGTAAAGA
ACCTCAACCTGCGTAACTTGTGCATGATCGGTACTGACGACTGTGGTTTTGCAGCTTGAAGTGTAAGCTACTTAACTCGC
TTGTAAAAACCTAAAAATGTA-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------AAATGCACGCCCTGATCTGCAAGGCAACAACAAAGCCATAATATTATATCAGCATACCCAAAACTAATGTAT
TCCGTTTAAACAACGGCAATCTTATGTGACTGACGTTCACTGGAAGAGCAGGGCATTTCCAATGTTTTCTCTGTCAGTGT
TAGTTGTATCGGAGGTGACAGTTTCTTCAGAATAACATGACATTTTTTGGAA--GGATGATAATTTTGAGCTTCCTTTTT
CAAAAAATGTCATGTTGTTCTAAAAAAACTGCCACGACACGACCAACTAAAACTGTCATCAAAATGTTCGCAAATATCAC
CCCCTCCCAGCGAACGGTCAGCCATATAAGAGGTCCTTAAATAATCTTTTAAATAAGGAATGCTTTATTACTTAAAAGGT
TTAAGGTCCTTAAACATTTGGCTGCTTAATTCTGAAGCTTTTCTTTCAAAGATTAACCAAAACTAGCAGATCCTAGTCCA
CCCCTACCGCTGCAGTTGACAAATAAAATGCACATCCTCCCCCCCTCCACCTACCGCAA
>chr3B_1
TTGCTTTGTAAGTTTGATCAAGTGTGTATACAAAACTATGTAGATGAACAATACTGAATCAATATGAATATATTCATCAT
TAGATATATTTTCATAATGTATTTATT-AATACAGGGTTGGCAGAGCAATGTTTTTTGAAACATAGGAGCTCGTAGAGGC
AACAGTTAAAAAGTCACCGATGCAGACCAGGAGACGCCGACGACCGCAGTCTACGAAGCAAATCGCCTTACCAGAGGAGA
AAACCACTGATAAGGACCTGTAGAACCTCGAAGACTACAGAAGCGGGCTGAATCCAGACGGATCCACCGGAAGCCTAAAC
CAATCGGATCCCAAAAGGCCTCCAGAAACACAGCTCCATACGTCCTCTGCTGATAAAAAACGCACCAACCGAATGGGGAT
AGAGTGGGGTAGAATATTATTCCTACCCCTGGGTAATGCCGCCTTAAACCAGACATAAAGACTCCGCTAAGGAAAACCTA
GGAAGAAAAAACACTCATGCCACTGTACGACTGGCCTGGGTTTCAGAACCGTGCACTAACGCCCTCTTCTTCCCGATGAT
TT-TTCTATACATTTAGTCAAACTCAGAAAGCTATGTGAATTTACACGGCATCAATCCTTGCATAGGCCAATGTTACGCG
CTTAT-GGGGGATTTTTTTTAAAAATTAGTTGCAGAACTACTACTACTGGCCTAGGTCAAACGGTAAATAAGCAAGGGCA
GGCGCAGGCTAGAACCACAATGCAACAACC----ATGGACTGTACTGGGACAAGAAGAAGGAGCTCCGGTGCGGGGCGGC
CATCTCGCTGTGGCGGACGTGCGGGCTCCACGGTCTCCTCTACTCCTGGCATGCTCCCCGCTATATAAAGCACAACACAC
GCTCCCTGCAT----------TGCCCACGTCCTTGATCGTCGTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTGCACTTAATCCAGCGCCAAAGAGGTATTACCAACATTCTA--------------------------AATTTTCCAC
TGCGTTTTATATCGTTTTTTCTTAATTTGTGACATTTCGATCTGTTTGTTCCCATAGAATACTGTACTTGTTTGCGGAGG
AAATCATCAGCCAGCCATAGCCATGCAGGAAGCGCTCGTCTCTCCGGCCAACGCCGACCGCCTCCGCTCGGCCTTCGAGC
TCAAGCCGTACGCCTTCGGGGACCAGCGCCTCTCTTCCTCGCCGCGCTACCTCCCGGGCGGCGACGACGGCCTGTACCGC
TGCTCCTCCCCCTTCAGCCCCAGCCTGGGCTTCTCCTCGCCGTCGCCGCTCACCACATCCGTCTCGCTCTCGCCGTCCTC
GTCCGGCTCCCTCGTCGACGACGGAGACTACGACGGCGCCGCTGCCGCCGATGCCACCGGCCACAGGCTCCAGCTCGCGC
GGCTCGCGCTGCAGTACCAGGAGGTGGCCGATCGCTACGAGCTCTGTCTGTCCCACCTCGCCGAGGCCGTCGACGAGGCG
GCGATCCTCCGCCGCGAGAATGCCGAGCTCCGCGTGGCCAACAACGACCTCGCGCGCCGCGTCGCGGTGCTCGGTGGCAA
GGAGACCGCCGCCGTCGTCATCGCTGACGAGATACGCCGGTTCCGCCTCGGCGAGCACAAGGGTGCCTCCAAGCAGCGCG
CGCCTGAGAAGCTCGCCGTGCTGCCAAAGAGCATCTCCGTCCGTTCGAATGACTACCTCAAGATGAACCAGGCCGCCCCG
GCAGCCGCCACGCCGGCGGCGTACAACCGCAAGCCGAGCTCGGTGAGTCCCTGCTCCCGCCTCGCCAATTCCGCATAATC
TCCTCCTCTCGAATTGGCATTTGACATTGTCGCACGCACCTGGATCGGCAGCAGCGCGCGTACGCGGGACTAGGGGCGGA
CGGCGGCAAGAAAGGCGAGGAGCAGAAGACCAAGCAAGACGCGGCGGGGGAGCTGGACGTGTACAACCAGGGCATGTTCA
AAACAGAGCTGTGCAACAAGTGGGAGGAGACGGGGGCGTGCCCCTACTGCGACCAGTGCCAGTTCGCGCACGGCGTCTCC
GAGCTCCGCCCCGTCATCCGCCACCCGCGATACAAGACCGAGGTCTGCCGCATGGTGCTCAACGGCGAGGTGTGCCCCTA
CGGCCACCGCTGCCACTTCCGCCACTCGCTCACGGCCGCCGAGCGCCTCCTCCGCAGCCGTTGAGGCAGTGCACGCCTCT
TCCGCCACAGTCTGAACCCCT-TTTTACCGTCTCAAATCAAGCCTACGCATACAC-----------GGGAAAATGTACAA
AAA-TACCAACGGCGTAAATAAGATATATGTATTATGATAAGTATATAATATAAGAACGTAAATGAAACCGAACGGTAGA
GTTAATGCCCAGCAGCCCAGGCAATGTGAATATCTGCGTATGCAGGAGTAGCCGTCTCTCAGGGACTTGTTCATATAC--
----ATTATATATGTCGTCGGTGTTGGTTTTAGGTGACAATTTGTCTCCAAATGTATTTCGAGGGAACGCGGGAAGATCG
ACATGGTACAATAAAGTCAGTGAGAGTGT-------AGATTGGCGAACTGGCAAGTGCTGCGAAGTTGAGGTGACACGCA
TGTTTTCTTGTTTATATTAT----------GAGCAGTAGATCTTGTATAGCAGCTCTATTGCTTTCTTCAGATTACCTTG
TTGCTCTTGCAA-TTTTCTTCGTAATGTCAGTCATTTTTGCAGTATATATAAGTTGGCATCTTTCTCAGTACCAACACAA
GTTCCCGATTTGTCCCCAAAAACTCTGTTGTCTGTAAATCTTTAGTTATCGATGAATGGATAACTGTTTACTCCGCTGTG
TCTGACTTTCTCTATGTATGCCTTTTCGGATGTACTCTTGGCAAATCAGAAGGCCGCTACGT-------TTCGGTAAAGA
ACCTCAACCTGCCTAACTTGTGCATGATCGGTACTGACGACTGCGGTTTTGCAGCTTGAAGTGTAAGCTACTTAACTCGC
TTGTAAAAGGCTATGAATGTA-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------AAATGCACGCCCTGTCCAGCAAGGCAACAACAAAGCCATAATATTATATCAGCATACCCCAAAAAAATGTAT
TCCGTTTAAACATCGGCAATCTTATCTGACTGACGTTCACTGGAAGAGCAGGGCATTTCCAATGTTTTTTCTGTCTGTGT
TAGTTGTATCAAGGGTGACAGTTTCTTCAGAATAACATGGCATTTTTTTTGGGTGGATGATAATTTTGAGCTTTCCTTTT
CAGAAAATGTCATGTTGTTCTAAAGAAACTGCCACCACACGACCAATTAAAATTGTCATCAAAATGTTCGCAAATATCAC
CCCCTCCCAGCAAACGGTCAGCCATATAAGAGGTCTTAAATATTTTTTAATAAGTGACA---CTTTATTACTTAAAAGGT
TTAAGGTCCTTAAACATTTGGCTGCTTAATTCTGAAGCCTTTCTTTCAGAG-----------------------------
-----------------------------------------------------------
>chr3A_645
--------------------------------------------------------------------------------
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-------------TTTTTTTAG---TTAGTTGCAAAACTACTACTACTGGCCTAGGTGAAACGGTAAATAAGCAAGGGCA
GGCGCAGGCTAGAACCACAATGCAACAACCATCCATGGACTGTACTGGAACAAGAGGAAGGAGCTCCGGCGCGGGACGGC
CATCTCGCTCTGGCGGA-GTGCGGGCTCCACGGTCTCCTCTGCTCCTGGCATGCTCCCCGCTATATAAACCACAACACAC
GCTGCCTGCAC-----CCGTGTACCCACCTCCTTCGTCCCCGTC------------------------CTCTCTCTCCCT
CTCTGCACCTAATCCAGCGCCAA-GAGGTATCACCAACATTCTCGGTTGAATTTTCAACATTCTGAGTTGAATTTTCCAC
TGCATTTTATGTCTTATTTTCTTAATTTGTGACATTCCGATCTGTTTGTTCCCAGAGAATACT----TTGTTTGCGGAGG
TAATCATCTGCCAGCCATAGCCATGCAGGAAGCGCTCATCTCTCCGGCCAACGCCGACCGCCTCCGCTCGGCCTTCGAGC
TCAAGCCGTACGGATTCGGGGACCAGCGCCTCTCCTCCTCGCCGCGCTACCTCCCGGGCGGCGACGACGGCCTCTACCGC
TGCTCCTCCCCCTTCAGCCCCAGCCTGGGCTTCTCCTCGCCGTCGCCGCTCGCCACGTCCGTCTCGCTCTCGCCGTCCTC
GTCCGCCTCCCTCGTCGACGACGGGGACTACGACGGCGCGGCCGCCGCCGACGCCACCGGCCACAGGCTCCAGCTCGCGC
GGCTCGCGCTGCAGTACCAGGAGGTGGCCGATCGCTACGAGCTCTGCCTCTCCCACCTCGCCGAGGCCGTCGACGAGGCG
GCGATCCTCCGCCGCGAGAACGCCGAGCTCCGCGTGGCCAACAGCGACCTCGCGCGCCGCGTCGCGCTGCTCGGTGGCAA
GGAGACCGCCGCCGTCGTCATCGCTGACGAGATACGCCGGTTCCGCCTCGGCGAGCACAAGGGTGCTTCCAAGCAGCGCG
CGCCCGAGAAGCTCGCCGTGCTGCCGAAGAGCATCTCCGTCCGTTCGAATGACTACCTCAAGATGAACCAGGCCGCCCCG
GCAGCCGCCACGCCGGCGGCGTACAACCGCAAGCCGAGCTCGGTGAGTCCCTGCTCCCGTCTCGCCAATTCCGCGTAGTC
TCTTCCTCTCGAACTGGCATTTGACATTGT-----------GGATCGGCAGCAGCGCGCGTACTCCGGACTGGGAGCGGA
CGGCGGCAAGAAAGGCGAGGAGCAGAAGAGCAAGCAGGACGCGGCGGGGGAGCTGGACGTGTACAACCAGGGCATGTTCA
AGACGGAGCTGTGCAACAAGTGGGAGGAGACGGGGGCGTGCCCCTACGGCGACCAGTGCCAGTTCGCGCACGGCGTCTCC
GAGCTGCGCCCCGTCATCCGCCACCCGCGGTACAAGACCGAGGTCTGCCGCATGGTGCTCAACGGCGAGGTCTGCCCCTA
CGGCCACCGCTGCCACTTCCGCCACTCGCTCACCGCCGCCGAGCGCCTCCTCCGCAGCCGTTGAGGCAGTGCGCGTCTCT
TCCGCCACAGTCTGAACCCCT-TTTTACCGTCTCAAATCAAGCCTACGCATACCTCAACAGCCCAGGGGAAAATGTACAA
AAATTACCAACGGCGTAAATAAGATATATGTATTATAAGTGCTGTATAATATAAGAAAGTAAATGAAACCGAACGGTAGA
GTTAGTGCCCAGCAGCCCAGGCAATGTGAATATCTGCGTATGCAGGAGTAGCCGTCTCTCAGGGACTTGTTCATACTGCT
ATCTATTATGTATGTCGTCCGTCTTGGTTTTAGGTGGCAGTTTGTCTCCAAATGTGTTTTTTGA-------GGGAGATCG
ACATGATACAATAATGTCAGTGAGTGTGTACTCTGTAGATTGGCGAACTGGCAAGTGCTGCGAAGTTGAGGTGACATGGA
TGTCTTCTTGTTTGTATTCTATATGACGAGGAGCAGTAGATCTTGTATAGCAGCTCTATTGCTTTCTTCAGATTACCTTG
TTGCTCTTGCAATTTTTCTTCGTAATGTCAGTGATTTTTGCAGTATAATTAAGTTGGCTGTCTGTAAAGAATGGC-----
--TCCTGATTTGTCCCCCAAACCTCTGTTGTCTGTAAATCTTAATTGAG-GATGAATGGACAACTGTTTACTCCGCTGTG
TCTGACTGTCCCTATGTATGACTTTTCGGATGTACTCTTGTGAT-TCAGAAAGCTGCTACGTTTCGGTATTCGGTAAAGA
ACCTCAACCTGCCTAACTTGTGCATGATAGGTATTGCCGACTGTGGTTTTGCAGCTTGAAGTGTAAGCTACTTAACTCGC
TTGTAAAAGGCTAAAAATGTACTCCCTTCATCCCAAATTAAGTGACTCAATTTTGTACTAATTTTAGTACAAATTTATAC
AAAATCAAGTCATTTATTTTGGAGTTAAATGCACTGGAGGTACTAAAAGTTTGGTTGGGATGTCACTTTAGTCCTAATTC
TTTTAAAATGAACCTTTAGGTCCTAATTCTTTAGTAAGTGGTTCATGCGAGGTCCTTTTTCCATGAGCGCTCATTGACAT
GCACGCGTGGCGCGTTGACCCACGCCACGTCGACAGAGGGGCCAACCGTCAGGCGAGAAAAATACACTGGAGCTCCTAAA
AGTTTCTGGGCATTGTCACTTTTGTCCTACTTTCAAAATACACGTGTAGATCCTAATACTATAGTAAGTGCTTCACGCGA
GGTCCTTTTTTGCATGATCTTTCGCTGACGTGCTTGCGTGACACATTGACCCATGCCATGTCAACTTAGAGGCCGTTGTG
GTTGCTCTTTTTTTTACAGAAATCCCTTTGTAACCCCCCCTCTTGACATTTCCCAACCCCTACCGAATCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTGCCCACACCGTCGCCATGGCTGGGGCAGCAAGCTCCTCGACAGGGAA
GCGAGTGACGAAGAGAAGCGTTGCAGCAGCGTCGGCAGCGTTGCCTCCTCCACAAGCTATAGAATGATCGTGTGAAAAAG
GACCTAGATGAACTACTTACTATAGAATTAGGACGTAAACGTGTGTTTTGAAAAAAGTAGGACTAAAATGACACTGCTCA
GAAACTTTTAGGATCACCAATGTATTTTTCTCGCCAGCCAGTTGGGCCCTCTGTCGACGTGGCATGGGTCAACGTGCCAC
GCGGGCAGGTCAACGAGCACTCGTGAAAAAAAGACCTCAGGTGAACCACTTACTAAAGAATTAGGACCTAAAGGTGCCTT
TTGAAAGAATTAGGACTAAAGTGACACCTCGATGAAACTTTTAGAACCTCCAATGCATTTAACTCCTTATTTAGAGACGG
AGGGAGTAAAATGCACGCCCTGACCTGCAAGGCAACAACAAAGCCATAATATTATATCAGCGTACCCAGAACTAATGTAT
TCCGTTTAAACATCGGCAATCTTATCTGACTGACGTTTACTGGAAGAGCAGGGCATTTCTAATGTTTTTTCTGTCAGTGT
TAGTTGTATCGGGGGTGATAGTTTCTTCAGAATAACATGGCATTTTCTGAGA--GGATGATAATTTTGAGCTTTCTTTTT
CAGAAAATGGCATGTTGTTCTAAATAAACTGCCACCACATGACCAATTAAAACTGTCTTCGAAATGTTCTCAAATATCAC
CCCCTCCCAGCGAACGGTCAACCATATAAGAGGTCCTTATATTTTTTTTATAAAGGAC---GCTTTATTACTTAAAAGAT
TAAAGGTCCTTAAACATTTGATTGCTTAATTCTGAAGTCTTTCTTTCAAAGATTAACCAAAACTCGTTGATCCTAGTCCG
CGCCTACCGCTGCAGTTAACAAATAAAATGAATACCCTCCCCCCCCCCCTCCC------
>SNPs
-----------------S-----------S---------------S--S-----SS---------S--S-----------
-------S----S----------S-S-S-------------S--------S----SSS-S------S-------------
-S-S-SSSS-S-----SS-----------S-S--SS-------------S-S------------------------S-S-
--SSSS-------------------S-SS------S--------S---S---------S----------S--S-----S-
-S--------S-S--------S-SS-S----------SS---SS---SS-S-S-S------S-------SSS---S-S--
----SS---S----S------------S-SS--S-----------------S-------------SSS-SSS--SSSSS-
-----S--------S----------S----------S--S---------------S-S--S--S------S---S--S--
--S---------------------S-----S-------------S---S----------------------S-------S
---S-S----------------------------------------------------------------S---------
-------------S----------------SSSS-SSSS-----------------------------------------
-------------------------------S------------------------------------------------
-----------SSSSS----------S-----------------------------------------------------
-------------------------------------------S----SSS----------S-S----------------
--------------------S----S-----------S------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
S-----------------------S---------------------------------------S---------------
-------------------------------------------------------------------S------------
--S-----------------------------------------------------------------------S-----
----S---------------------------------------------------------------------------
-------------------------------------------S-----------------------------SS-S---
-----------------S--S-----------------------------------------------------------
----------------------------------------------------------------------S---------
------------------------------S-------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-S----------S---S-------------------------------------------
-------------------------------------SS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------------SSSSS-----------------------------------------------------
----------------------------------------------------------------------S------S--
-----------------------------------------------------------------S--------------
---S---------S------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------SS----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------S------------S------------------------------------------S-----------
------------S--------------------------S---------SS----------------------S------
--S---------------------S----------S----------S---------------------------------
------------------------------------------SS-S---SS--SSSSS-SS-------------------
--------------------------------------S-------------------------S-SS-----------S
-S---------------S------------S-S-S----------S--SS-SSSSSSSS
>forward_452
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--------------------------------GCAATGCCGCCTTAAACCAA----------------------------
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>reverse_2277
--------------------------------------------------------------------------------
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------------------------------------CTCAAGCCTACGCATACACG------------------------
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>forward_1754
--------------------------------------------------------------------------------
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------------------------------------------------------ACCTCAAGATGAACCAGGCG------
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>reverse_2617
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--------------------------------------------------------CCTGCGAAGTTGAGGTGACA----
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