>input_sequence_50616
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-----------------------------------------------------------ATGGAAATGGAGGCTTCCGTC
TTGGCAGCTCTGGCGGCAGTAGTCGTTGCTTCCATCTTCTTGGTATTGCCACACCTGAGAAAGCAGAGCCCATCTCAGGA
CGATCGGCGCCGCCAGCTGCCTCCGGGCTCCTTCGGCCTCCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGCCGAGGCATGGCTCCGGCGCTGGGCCTCCGAGTACGGCACCGTCTCAAAGCTCTCCCTCTTCGGCCTC
CCCACGGCCTTGCTCGTCGGCCCCGCCGCCAACAAGTTCCTCTTCGCCAGCACCGCGCTCACCGCCAAGACCACCACCTC
CTTCAACAGCATGGTCGGCAGGCGCAACATCCGAGAGCTGGCCGGCGACGACCACCGCCGCGTAAGGGCCATGATGGTCC
AGTTCCTCAAGCTGGACAGCGTCAGGAGCTACGTCGCCAGCATGGACGACGAGGTCCGGCACCACATCCGCGCCCACTGG
GACGGCCGCGCAACCGTCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGACATCATGTGCACCGTCATCTT-CGGGC
TCGGGAGAGCCGAGCACGCCGCCGTGAGGCGGGAGCTCTCGGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTTTGACCTCCTACGGCAAGTGCCTCGCCGCGAGCCGGCGAGGCCGGCGAGCCGTCGCGGCAGTCAT
CGGCGAGAAGCGCGCCAAGCTGGAGAGCGGGCACAGCTCGCCGTTCGACGACCTCATGACCCACATGCTCGCCGAGGGGC
TAGCCGACGAGGATATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACGGCCACCCTCCTCACCTTC
CTCCTCCGTCATCTCGACGGCAACAGGGAGGCCTACGGCAGGGTCGTGGCGGAGCAACAAGAGGTCGCGAGGAGCAAGGC
TCCGGGGGAAGCTCTGTCATGGGACGACCTCGGCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTGCGCCTGG
TGCCTCCGGTGTTCTCCCTGCTCAAGAGGGCGGTCGAGGACGCGGAGTTCGACGGCCACCTCATCCCCAAGGGCTGGCAG
GTGCTGGGGGCGATGAACATGACGCAGTGGGACCCGGCCATCTTCCCGGAGCCCGGCAGGTTCGAGCCGGCGAGGTTCGA
GAGCCCGGCACCGCCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGACCGTATGCCCGGGAAACGAGTTCGCTAGGGTGG
AGGCGCTGGTGGCCATGCACTACATCGTCACCGGGTTCAGGTGGAAGCTCGCCGACGGCTGCGACGGCAGCTTCTCCCGG
TATCCGCTGCCGTCCCCGGCTCAGGGCCTCCTCATCGACATCGAGCCAATGG--ACACAGCCACCACAGGTGCAGCAGGC
ATCACCAAATGA--------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G375000
TACAATGTATCATTTATTAACACAAGTTCACGCCGCAACAGGGCACGCCAATGCATCAAGTGTGTTTTTCTCTTAAAATA
AGATAACCCTGACCTTGTGCACATAACCATCTTTATTAAATTATTCAACAGAGCCTGACAAAATAAATATATAAATCAAC
CTAAAGTCATATTTCTAATAATCTATGTCAATACACCTACTAGCTTGATGATATGTCATGGTCACACACGAGCACACATC
AACTAATCCGGTGGCCTCCTCAAGCTACCCCATGGCGAGTTGAGATTACCAACCGGTCTGACAGACCATCAACGCGCCGT
GCATGCACATGCTCCAGAATCCGTTGCCACCATCATCCGTCGTCCCAACTTACAACTTTAGGAGAGATCCACGCATTGAC
CTTGCCAGACACAGCTGTTGTCGACGCCACGACGACCAGACAACACAATCACCCTGCGGGCATCCATCGCCGAGACCCCG
CTGCGCCACGCCGCCGAGACCCGCCGTCATCGACTTGGTAGATGCCACACCGCACCAACTCCTGATCCAGATCGCGGCCA
ATACTAACCTAACAGTGTCCACTATCTCCCAAGAGTGCGCCTTCAAGAAGAGAATGGCGTCAACGATGCGGTCGCCACAC
ACCATAGTTAGGACTTTCACTCAAAGACAAATAATGTGATAGAGGTGGAAGGACGAACGTCTAAAAAAAAACGGCACCCT
CGGAAGTGTAAATGAACTGTTAATTAATCCTCTCCCTCTATTGCTTATGTACCTGCTACATTTTGTCCGTACTCCCGTT-
GGAATCCATCGTGAGCAT--------GATTCCCTCCAATAATTCCGACCGGCAGTAAACAAATGAAGTACTCCAATACTA
TTATTT-GTAGGAGACCAATGAAAAGATTAAGCTTGGATGCAGCT---GATCTCATCAAAG--ATTTACTATACA-TAGT
GGACCGAGTGTCCATCTGATCAGAAAAACAACCATT--GGAGAGCTTGGATCAAG-AGGATGGAAATGGAGGCTTCCGTC
TTGGCAGCTCTGGCGGCAGTAGTCGTTGCTTCCATCTTCTTGGTATTGCCACACCTGAGAAAGCAGAGCCCATCTCAGGA
CGATCGGCGCCGCCAGCTGCCTCCGGGCTCCTTCGGCCTCCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGCCGAGGCATGGCTCCGGCGCTGGGCCTCCGAGTACGGCACCGTCTCAAAGCTCTCCCTCTTCGGCCTC
CCCACGGCCTTGCTCGTCGGCCCCGCCGCCAACAAGTTCCTCTTCGCCAGCACCGCGCTCACCGCCAAGACCACCACCTC
CTTCAACAGCATGGTCGGCAGGCGCAACATCCGAGAGCTGGCCGGCGACGACCACCGCCGCGTAAGGGCCATGATGGTCC
AGTTCCTCAAGCTGGACAGCGTCAGGAGCTACGTCGCCAGCATGGACGACGAGGTCCGGCACCACATCCGCGCCCACTGG
GACGGCCGCGCAACCGTCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGACATCATGTGCACCGTCATCTT-CGGGC
TCGGGAGAGCCGAGCACGCCGCCGTGAGGCGGGAGCTCTCGGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTTTGACCTCCTACGGCAAGTGCCTCGCCGCGAGCCGGCGAGGCCGGCGAGCCGTCGCGGCAGTCAT
CGGCGAGAAGCGCGCCAAGCTGGAGAGCGGGCACAGCTCGCCGTTCGACGACCTCATGACCCACATGCTCGCCGAGGGGC
TAGCCGACGAGGATATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACGGCCACCCTCCTCACCTTC
CTCCTCCGTCATCTCGACGGCAACAGGGAGGCCTACGGCAGGGTCGTGGCGGAGCAACAAGAGGTCGCGAGGAGCAAGGC
TCCGGGGGAAGCTCTGTCATGGGACGACCTCGGCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTGCGCCTGG
TGCCTCCGGTGTTCTCCCTGCTCAAGAGGGCGGTCGAGGACGCGGAGTTCGACGGCCACCTCATCCCCAAGGGCTGGCAG
GTGCTGGGGGCGATGAACATGACGCAGTGGGACCCGGCCATCTTCCCGGAGCCCGGCAGGTTCGAGCCGGCGAGGTTCGA
GAGCCCGGCACCGCCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGACCGTATGCCCGGGAAACGAGTTCGCTAGGGTGG
AGGCGCTGGTGGCCATGCACTACATCGTCACCGGGTTCAGGTGGAAGCTCGCCGACGGCTGCGACGGCAGCTTCTCCCGG
TATCCGCTGCCGTCCCCGGCTCAGGGCCTCCTCATCGACATCGAGCCAATGG--ACACAGCCACCACAGGTGCAGCAGGC
ATCACCAAATGATCTCGAAGAATCCCGTAGCA-GATCTGAATGGTGCACCAACACCATTCAGCTCTATGATTTCCATGTT
AAATGT---ACGATTACAGA---TACTAATTTGCAGTGAAGCGTAAATATTTCTCGCCGTTCTTGAAAGGAATTTCGGCA
ATTGTCATCAGTTTAATGTTCGAAATGCCCTCGGAATCGTACTGGAGTTGGAGCGTGGTTATTAGTATGTACGGCACAGA
TTTAGTTATGGTACTCAGCCTCCCGTCCGGGGAGACGGCAACCAAACACTCGGAGATGATCATATGTGGGGTGGAGCCCA
TGCAATTGGAAGTAAGGTGTGTTACCATGAATGGCTCGAGAGAGGCGTCGATTGAGAAGGTAGGTGGCCGTGTGAAGCGT
TTCAACCCAAAACGGAGGGGTAAGCTTAGCTTGGAGAAGTAAAGTACGAACGTTGTCGTTGGTGGTACGGAGAAGACGCT
CGGTCTTCTCGTTCTGGGGTGAAGTGTAGGGACAAGAGAAACGGTAAACGATGTCGTTGGTGGAGAAGAAGGAGCGTATG
TCATGATTGATGAACTCTCCGCCGTTATCGCATTGTAGGGCCTTAATGACTACATTGTATTGGGTTTTAACATAGGAAAA
GAAACGTTGAAGAATGGTGGATGTGTCTGATTCGTGGCGCAAGGGAAAAGTCCATGAAAAATGTGAGTAGTCATCAAGTA
CAACTAAGTAGTATTGGTAACCGGAGAAGCTCACAACCTGAGAGGTCCATAAATCACAATGAATTAAATCAAAGGGAGCA
AATGTGCGACTAGTAGAAGAAGTAAAAGGGAGACGGGGTTGGTGTCCAAGTTGACACGCATCACACGGCATAT---GAGG
---TTTATTACAAGGTAGAAGAAAATCATGTGCTAT------GGAAGTAAAAGATTGAGCACTAGGGTGGCCAAGCCTCC
GGTGCCATACATCACCATCGGAGACAGTAGTGGTGAAGGCAGCGCGCCAAGCCTTGTTATTGCCGAAAAAG
>chr3D_742
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---------------------AATTAATCCTCGCTCTCTGTTGCTTCTGTAGCTCCTA-ATTTTGTCTGTACT--CCCGA
GGAATCCATCGTGAAATAATTCCATCGATTCCCACCAATAATTCCGACCGGAAATAAACAAATGAAGTACTTTAATATCA
----TT-ATAGGAGACCAATTAAAAGATTAAGCTTGGATG-AGCT---GATCTCATCGATTTAATTTACTATACAATAGT
GGACTGAGTGTCCATCTGATCAGAAAAACGGCCATTGGGGAGAGCTTGGATCAAGAAAGATGGAAACGGAGGCTCCCGTC
TTGGCAGCTCTGGCGGCACTAATCGTTGCTTTCATCTTCTTGGTATTGCCACACCTGAGAAAGCAAAGCTCATCTCAGGA
CGATCGGCGCCGCCAGCTGCCTCCGGGCTCCTTGGGCCTTCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGCCGAGGCATGGCTCCGGCGCTGGGCCTCCGAGTACGGCCCCATCTCAAAGCTCTCCCTCTTCGGCCTC
CCCACGGCCTTGCTCGTCGGCCCCGCCGCCAACAAGTTCCTCTTCGCCAGCACCGCGCTCACCGCCAAGACCACCACCTC
CTTCAACAGTATGGTCGGCAGGCGCAACATCCGAGAGCTGGCCGGCGACGACCACCGCCGCGTAAGGGCCATGATGCTCC
AGTTCCTCAAGCTGGACAGCGTCAGGAGCTACGTCGCCAGCATGGACGACGAGGTCCGGCACCACATCCGCGCCCACTGG
GACGGCCGCGCAACCGTCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGACATCATGTGCACCGTCATCTT-CGGGC
TCGGGAGAGCTGAGCACGCCGCCGTGAGGCGGGAGCTCTCCGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTGTCACCTCCTTCGGCAAGTGCTTCGCCGCGAGCCGGCGAGGCCGGCGCACCGTCGCGGCAGTCAT
CGACGAGAAGCGCGCCAAGCTGGAGAGCGGGCGTAGCTCGCCGTCCGACGACCTCATGACCCACATGCTCGCCGAGGGGC
TAGCCGACGTGGAGATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACCGCCACCCTCCTCACCTTC
CTCCTCCGGCACCTCGACGGCAACAGGGACGCCTACGGCAGGGTCGTGGCGGAGCAACAAGAGGTCGCGAGGAGCAAGGC
TCCGGGGGAAGCTCTGTCATGGGACGACCTCGGCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTGCGCCTGG
TACCTCCGGTGTTCTCCCTGCTCAAGAGGGCGGTCGAGGACGTGGAGTTCGACGGCCACCTCATCCCCAAGGGATGGCAG
GTGTTGGGGGCGATGAACATGACGCAGTGGGACCCGGCCATCTTCGCGGAGCCAAGCAGGTTCGAGCCAGCGAGGTTCGA
GAGCCCGGTACCGCCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGACCGTGTGCCCGGGAAACGAGTTCGCTAGGGTGG
AGGCGCTGGTGGCCATGCACTACATCGTCACCGGGTTCAAGTGGAAGCTCGCCGACGGCTGCGACGGCAGCTTCTCCAGG
TACCCGCTGCCGTCCCCGGCTCAGGGCCTCCTCATCGACATCGAGCCAATGG--ACACAGCCGCCACAGGTGCAGCAGGC
ATCACCAAATGATCTCGAAGAATCCCGCAGCA-GATCTGAATGGTGCACC--CACCATTCAGCTCTATGATTTGCATGTG
AAATGT---ACGATTACAGATACT--------------------------------------------------------
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>chr3B_743
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----------------------ATTAAACCTCGCTCTCTATTGCTTTTGTAGCTGCTACATTTTGTCTTCACT--CCCGA
GGAATCCATCGTGAGCAT--------GATTCCCACTAATAATTCCAACCGGAAATAAACAAATGAAGTACTTTAATATCA
----TTTAGAGGAGATCAATGAAAATATTAAGCCTGGATGTAGCT---GATCTCATGGATTTAATTTACTATACA-TAGT
GGACTGAGTGCCCGTCTGATTAGAAAAACAACCATC--GGAGAGCTTGGATCAAAAAAGATGGAAATGGAGGCTTCCGTC
TTGGCAGCTCTTGCGGCAGTAATCCTTGCTTTCATCTTCTTGGTATTGCCACACCTGCGAAAGCAGAGCTCATCTCAAGA
CGACCGGCGCCGCCAGCTGCCTCCGGGCTCCTTGGGCCTTCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGCCGAGGCATGGCTCCGGCGCTGGGCCTCCGAGTACGGCCCCATCTCAAAGCTCTCCCTCTTCGGTCTC
CCCACGGCCTTGCTCGTCGGCCCCGCCGCCAACAAGTTCCTCTTCGCCAGCACCGCGCTCACCGCCAAGACCACCACCTC
CTTCAACAGTATGGTCGGCAGGCGCAACATCCGAGAGCTGGCCGGCGACGACCACCGCCGCGTAAGGGCCATGATGGTCC
AGTTCCTCAAACTGGACAGCGTCAGGAGCTACGTCGCCAGCATGGACGACGATGTCCGGCACCACATCCGCGCCCACTGG
GACGGCCGCGCAACCGTCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGACATCATGTGCACCGTCATCTT-CGGGT
TCGGGAGAGCTGAACACGCCGCTGTGAGGCGGGAGCTCTCGGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTTTCACCTCCTTCGGCAAGTGCCTCGCCGCGAGCCGGCGAGGCCGGCGAACCGTCGCGGCAGTCAT
CGACGAGAAGCGCGCCAAGCTGGAGAGCGGGCATAGCTCGCCGTCCGACGACCTCATGACCCACATGCTCGCCGAGGGGC
TAGCCGACGAGGAGATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACCGCTACCCTGCTCACCTTC
CTCCTCCGACACCTTGACGGCAACAGGGACGCCTACGGCAGAGTCGTGGCAGAGCAACAAGAGGTCGCGAGGAGCAAGGC
TCCGGAGGAAGCTCTGTCATGGGACGACCTCGGCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTGCGCCTAG
TACCTCCGGTGTTCTCCGTGCTCAAGAGGGCGGTCGAGGACGTGGAGTTCGACGGCCACCTCATCCCCAAGGGATGGCAG
GTGTTGGGGGCGATGAACATGACGCAGTGGGACCCGGCCATCTTCCCGGAGCCCAGCAGGTTCGAGCCGGCGAGGTTCGA
GAGCCCGATAGCGCCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGACCGTGTGCCCGGGAAACGAGTTCGCTAGGGTGG
AGGCGCTGGTGGCCATGCACTACATCGTCACCGGATTCAAGTGGAAGCTCGCCGACGGCTGCGACGGCAGCTTCTCCAGG
TACCCGCTGCCGTCCCCTGCTCAGGGCCTCCTCATCGACATCGAGCCAATGGACACACAGCCACCACAGGTGGAGCAGGC
ACCACCAAATGATCTCCAAGAATCCCGCAGCA-GATCTGAATGGTGCACC--CACCATTCAGCTCTATGATTTGCATGTC
AAATGT---ACGATTACAGATAGTACTAATTTGTACTGAAGCGTAAATATTTCTCGCCGTTCTTGAAAGGAATTTCGGCA
GTTATCATCAGTTTAATGTTCGAAATGCCCTCGGAATCGTACTAGAGTTGGAGCGTGGTTATT-----------------
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>chr2B_756
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-----------------------------------CTCTGTTGTTTCTGTAGCTGCTC-AATTTGTCTGTACT--GAGT-
GGAACCCATCGTAAGCAT--------GATTCCCTCCAATAATTCCGATCAGAAATAAACAAATGAAGTACTTTAATATTA
----TTTATTGGAGACCAGTCAAAATATTAAGCTTGGATGTAGCTTTTGATCTCATCGGTTTAATTTACTAGATAGTGGA
CAAGTGGA-GTCCATCTGATCAGGAAAACAACCATT--GGAGAGCTTGGACCAAG-AAGATGGAAATGGAGGCTTCCGTC
TTGGCAGCTCTTGCGTCAGTAATCGTTGCTTTCATCTTGTTGGTATTGCCACACCTGAGAAAGCAGAGCTCATCTCAAGA
CGATCAGCGCCGCCAGCTGCCTCCGGGATCCTTCGGCCTTCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGGCGAGGCATGGCTCCGGCGCTGGGCCTCCGAGTACGGCCCCATCTCAAAGCTCTCCCTCTTCGGCCTC
CCCACGGCCTTCCTCGTCGGCCCCGCCGCCAACAAGTTCCTCTTCGCCAGCACCGCGCTCACCGCCAAGAGCTCCACCTC
CTTCAACAGTATGGTCGGCAGGCGCAACATCCGGGAGCTGGTCGGCGACGACCACCGCCGCGTAAGGGCCATGATGGTCC
AGTTCCTCAAGCTGGACATCGTCAGGAGCTACGTCGCCAGCATGGACGACGAGGTCCGGCACCACCTCCGCGCCCACTGG
GACGGCCGCACGACCGTCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGGCATCATGTGCACCGTCATCTTTCGGGC
TCGGGCGAGCTGACCACGCCGCCGTGAGGCGGGAGCTCTCGGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTTTCACCTCCTTCGGCAAGTGCCTCGCCGG-------------CGGCGAACCGTCGCGGCAATCAT
CAAGGAGAAGCGCGCCAAGCTGGAGAGCGGGCATAGTTCGCCGTCCGACGACCTCATGACCCACATGCTCGCGGAGGGGC
TGGCCGACGAGGAGATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACCGCCAGCCTCTTCACCTTC
CTCCTCCGGCACCTCGATGGCAACCGGGACGCCTACGGCAGAGTCGTGGCAGAGCAACAAGAGGTCGCCAGGAGCAAGGC
TCCGGGTGAAGCTCTGTCATGGGACGACCTCGCCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTCCGCCTGG
TACCTCCCGTGTTCTCCATGCTCAAGAGGGCGGTCGAAGACGTGGAGTTTGATGGCCACCTCATCCCCAAGGGATGGCAG
GTGCTGGGGGCGATGAACCTGACGCAGCAGGACCCGGCCATCTTCCCTGAGCCAAGCAGATTCGAGCCGGCGAGGTTCGA
GAGCCCGATACCACCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGCGCATGTGCCCGGGCAACGAGTTCACTAGGGTGG
AGACGCTGGTGGCCATGCACTACATCGTCACCAGGTTCGAGTGGAAGCTCGACGAAGGCTGCGACGGCAGCTTCTCCAGG
TACCCGATGCCGTCCCCTGCTCGGGGGCTCCTCATCGACATCGAGCCAATAGACACAA--CCACCACAGGTGCAGCAGGC
ATCAGCAAATGATTTCGAAGAATTTAGTAGCCTGATCCGAATAATGCATC--CACCATTCAGCTGTATGATT-GCAAATG
AAATGTAGTACGATTATAAA---CACTA--TTGCAATCATGCCCAAGTATTTCTCACA-TTCTTGAAAGGAAATTTGGCA
A-------------------------------------------------------------------------------
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>chr2A_768
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-----------------------------------------------TGTAGCTGCTC-AATTTGTATGTACT--CGGT-
GGAATGCATCGTAAGCAT--------GATTCCCTCCAATAATTTCGATCAGAAATAAACAAATGAAGTACTTTAAGATTA
----TTTATTA-AGACCAATCAAAATATTAAGCTCGGATGTAGCTTTTGATCCCATCGGTTTAATTTACTAGACAGTGGA
CAAGTGGA-GTCCATCTGATGAGAAAAACAAGCATT--GGAGAGCTTGGATCAAG-AAGATGGAAATGGAGGCTCCCGTC
TTGGCAGCTCTTGCGGCAGTAATCATCGCTTTCATCTTGTTGGTATTGCCACACCTCAGAAAGCAGAGCTCATCTCAAGA
CGATCGGCGCCGTCAGCTGCCTCCGGGCTCCTTCGGCCTTCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGGCGAGGCATGGCTCCGGCGCTGGGCCTCCGAGTACGGCCCCATCTCAAAGCTCTCCCTCTTCGGCCTC
CACACGGCCTTCCTCGTCGGCCCCGCCGCCAACAAGTTCCTCTTCGCCAGCGCCGCGCTCACCGCCAAGAGCTCCACCTC
CTTCAACAGTATGGTCGGCAGGCGCAACATCCGGGAGCTGGTCGGCGACGACCACCGCCGCGTGAGGGCCATGATGGTCC
AGTTCCTCAAGCTGGACATCGTGAGGAGCTACGTCGCCAGCATGGACGACGAGGTCCGGCACCACCTCCGCGCCCACTGG
GACGGCCGCACGACCGTCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGACATCATGTGCACCGTCATCTT-CGGGC
TCGGGAGAGCTGACCACGCCGCCGTGAGGCGGGAGCTCTCCGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTTTCACCTCCTTCGGCAAGTGCCTCGCCGCGAGCCGGCGAGGCCGGCGAACCGTCGCGGCAATCAT
CAAGGAGAAGCGCGCCAAGCTGGAGAGCGGGCATAGTTCGCCGTCCGACGACCTCATGACCCACATGCTCGCGGAGGGGC
TGGCCGACGAGGAGATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACCGCCAGCCTCCTCACCTTC
CTCCTCCGGCACCTCGATGGCAACCGGGACGCCTACGGCAGGGTCGTGGCAGAGCAACAAGAGGTCGCCAGGAGCAAGGC
TCCGGGGGAAGCTCTGTCGTGGGACGACCTCGGCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTGCGCCTGG
TACCTCCCGTGTTCTCCATGCTCAAGAGGGCGGTGGCAGACGTGGAGTTTGACGGCCACCTCATCCCCAAGGGATGGCAG
GTGTTGGGGGCGATGAACCTGACGCAGCAGGACCCGGCCATCTTCCCGGAGCCAAGCAGGTTCGAGCCGGCAAGGTTCGA
GAGCCCGATACCACCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGCGCATGTGCCCTGGCAACGAGTTCACTAGGGTGG
AGACGCTGGTGGCCATGCACTACATCGTCACCGGGTTCAGGTGGAAGCTCGCCGACGGCTGCGACGGCAGCTTCTCCAGG
TACCCGATGCCGTCCCCGGCTCAGGGGCTCCTCATCGACATCGAGCCAATAGACACAA--CCACCACAGGTGCAACAGGC
ATCAGCAAATGATTTCGAAGAATTTAGTAACCTGATCCGAATGATGCATC--GACCATTCAGCTGTATGATT-GCAAATG
AAATGT---ACGATTACAGATA----------------------------------------------------------
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>chr2D_768
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-----------------------------------------------TGTAGCTGCTC-AATTTGTCTGCACT--CGGT-
GGAATCCATCGTAAGCAT--------GATTCCGTCCAATAATTCCCATCAGAAATAAACAAATGAAGTACTTTAAGATTA
----TTTATTGGAGACCAATCAAAATTTTAAGCTTGGATGTAGCTTTTGATCTCATCGGTTTAATTTACTAGATAGTGGA
CAAGTGGA-GTCCATCTGATGAGAAAAACAAGCATT--GGAGAGCTTGGATGAAG-AAGATGGAAATGGAGGCTTCCGTC
TTGGCAGCTCTTGCGGCAGTAATCGTTGCTTTCATCTTGTTGGTATTGCCACACCTGAGAAAGCAGAGCTTATCTCAAGA
CAATCGGCGCCGCCAGCTGCCTCCGGGCTCCTTCGGGCTTCCCGTCGTCGGCCAGACGGTCGGCCTACTGCGCGCCCTCC
GCGCCAACACCGGCGAGGCATGGCTCCGGCGCTGGGCATCCGAGTACGGCCCCATCTCAAAGCTCTCCCTCTTCGGCCTC
CCCACGGCCTTCCTAGTCGGCCCCGCCACTAACAAGTTCCTCTTCGCCAGCACCGCGCTCACCGCCAAGAGCTCCACCTC
CTTCAACAGTATGGTCGGCAGGCGCAACATCCAGGAGCTGGTCGGCGACGACCACCGCCGCGTAAGGGCCATGATGGTCC
AGTTCCTCAAGCTGGACATCGTGAGGAGCTACGTCGCCAGCATGGACGACGAGGTCCGGCACCACCTCCGCGCCCACTGG
GACGGCCGCACGAGCATCGCGGTGATGCCGTCGATGAAGTCGCTCACCTTCGACATCATGTGCACCGTCATCTT-CGGGC
TCGGGAGAGCTGACCACGCCGCCGTGAGGCGGGAGCTCTCGGCGGAGTTCCAGCAGCTGGTGAGGGGCATCTGGGCGATC
CCGGTGAACCTGCCTTTCACCTCCTTCGGCAAGTGCCTCGCCGCGAGCCGGCGAGGCCGGCGAACCGTCGGGGCAATCAT
CAAGGAGAAGCGCGCCAAGCTGGAGAGCGGGCATAGCTCGCCGTCCGACGACCTCATGACCCACATGCTCGCGGAGGGGC
TGGCCGACGAGGAGATCATCGACAACGTCATGTTCATGATGGTAGCGGCGCACGACACCACCGCCAGCCTCCTTACCTTC
ATCCTCCGGCACCTCGATGGCAACCGGGACGCCTACGGCAGAGTCGTGGCAGAGCAACAAAAGGTCGCCAGGAGCAAGGC
TCCGGGGGAAGCTCTGTCATGGGACGACCTCGGCAAGATGAAGTACACATGGTCGGCGGCGATGGAGACCCTGCGCCTGG
TACCTCCCGTGTTCTCCATGCTCAAGAGGGCGGTCGAAGACGTGGAGTTTGACGGCCACCTCATCCCCAAGGGATGGCAG
GTGTTGGGGGCGATGAACCTGACGCAGCAGGACCCGGCCATCTTCCCGGAGCCAAGCAGGTTCGAGCCGGCGAGGTTCGA
GAGCCCGATACCACCCTACAGCTTCGTGGCGTTCGGCGGCGGCGCGCGCTTGTGCCCGGGCAACGAGTTCACTAGGGTGG
AGACGCTGGTGGCCATGCACTACATCGTCACCGGGTTCAAGTGGAAGCTCGCCGACGGCTGCGACGGCAGCTTCCCCAGG
TACCCGATGCCGTCCCCGGCTCAGGGGCTCCTCATCAACATCGAACCAATAGACACAA--CCACCACAGTTGCAGCAGGC
ATCAGCAAATGATTTCAAACAATTTAGTAGCCTGATCCGAATGATGCATC--CACCATTCAGCTGTATGATT-GCAAATG
AAATGTAGTACGATTACAAA---TACTA--TTGCAATCATG-CCAAGTATTTCTCACA-TTCTTGAAATGAAATTTGGCA
A-------------------------------------------------------------------------------
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>chr2A_2729
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-------------------------------------GCAACCAAACACGCGGAGATGATCATATGTGGGGTGGAGCCCA
TACAATTGGAAGTAAGGTGTGTTACCATGAATGGCTCGAGAGGGGCGTCGATTGAGAAGGTAGGTGGCTGTGTGAAGCGC
TTCAACCCAAAACGGAGGGGTAAGCTTGGCTTGGAGAAGTAAAGTATGAACGATGTCGTTGGTGGTACGGAGAAGACGCT
CGGCCTTCCCGTTCTGGGGTGAAGTGTGGGGACAAGAGAAACGGTAAACGATGCCGTTGGTGGAGAAGAAGGAGCGTAGG
TCATGATTGATGAACTCTTTGCCATTATCGCATTGTAGGGCCTTAATGACTACATTGTATTGGGTTTTAACGTAGGAAAA
GAAACGTTGAAGAATGGTGGATGTGTCTGATTTGTGGCGCAAGGGAAAAGTCCATGAAAAATGTGAGTAGTCATCAAGTA
CAACTAAGTAGTATTGGTAACCGGAGAAGCTCACAACCGGAGAGGTCCATAAATCACAATGAATTAAATCAAAGGGAGCA
AATGTGCGACTAGTAGAAGAAGTAAAAGGGAGACGGGGTTGGCGTCCAAGTTGACACGCATCACACGGCATAT---GAGG
---TTTATTGCAAGGTAGAATAAAATCATGTGCTAT------GGAAGTAAAAGATTGAGCACTAGGGTGGCCAAGCCTCC
GGTGCCATACATCGCCATCGGAGACAGTAGTGGTGAAGGCAGCGCGCCAAGCCTTGTTATTGCCGAAAAAG
>chr2B_2730
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--------------------------------------CATCCAAAGACGCGGAGATGATCATAGGATGGGTGGGAGCCG
TGTAGAAGAAAATATGGAGTGTAATTGTTGATGGCACGGGAGGGCCTTCGGTTGAGAAGGTATGTGGCGGTGTGTAAAGC
TTCGACCCAGAAGGGAGGTGGGAGATGGGCTTGGAAGAGAAGGGAGCGCACAATGTCGTCTGTAGTGCGAAGAAGACGCT
CGGCTTTTCCATTTTGGGGCGAAGTGTGGGGGCAGGAAAATCTATAGACAATGCCGTTGGAGGAGAAGAAGGATCGGAGA
GAGGAGTTGATGAACTCGCCGCCATTGTCACACTGCATGCTCTTGATTACAACGCCAAATTGGGTATGAACAAATGTAAA
GAAGTGTTGTAAGACGGTGGATGTGTCGGACTTATTGCGTAAGGGAAAAGACCACGAATAATGAGTGTAATCATCGAGAA
TAACTAAGTAGTATTCAAAACCAGAAAAACTTACAACAGGTGAGGTCCACAAATCACAATGAATTAAATCAAAGGGAGCG
TAAGACTTAATAAGGGAAGACGAAAAGGGAAGCCGGGGCTGCCAGCCCATTTGACAAGCACTACAAGGAGTGTGGGGTGG
---CTTATTACAAGTGCTAAGAAAATCTTTAGCTAT------GGAGGAAAAGAAGTGCGCGCCGGGGTGGCCAAGCCGAC
GATGCCA----------------------------------------------------------------
>chr7D_2735
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-------------------------------------------AAATACTCGCAAATGATCGTACGTGGGGTGAATGCCA
TGAAGCATGTAGTACGGTGTGTGATCGTGAATGGCACGTGAAGGACGACGGTTGAGGAAATATGTGGCCGTGTGCAAGGC
TTCAGCCCAAAAGGGAGGGGTGAGGTTGGCTTGGACGAGGAGAGTGCGGATGATATCATTTGTAGTGCGAAGGAGACGTT
CGGCCTTGCCATTCTGTGGTGAGGTGTGAGGGCACGAGAAGCGGTATGCAATGCAGTTGGCGGAGAAGAACGCACGGAGT
GTGGAGTTAATGAACTCACCACCATTGTCGCACTGTAAGGCTTTGATGATCACATTATATTGAGTACGAACATAGGAGAA
GAAACGTTGGAGAGTAAGGGATGTGTCCGACTTGTTGCGAAGAGGATATGACCAGGAGAAGTGAGTGTAGTCATCAAGCA
CAATCAAGTAATATTGATAACCGGAAAAGTTTACAACGGGGCTGGTCCATAAATCACAATGAATTAAATCAAATGGAGCA
AAGGTGCGACTATGTGAAGTAGGGAAAGCGAGGCGCGGCTGCCGTCCAAGTTGGCAAGCATTACATGGTGTAT---GCGC
AATCTTATTACAAGAGGGAAGAAAATCATGGGCTGCTAAGGAGGAAGTAAC---TTGTGGGCTGGGGTGGCCAAGCCGGC
GGTGCCACACGTCGGCGTTGGAGGTGGTGGCGGAGAGGGCTGTGCTCCAAGGCTTGTTATTACCGAAGAA-
>chr3A_2802
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------------------------------ATGGCACGGGAGGGCCGTCGGTTGAGAAGGTATGTGGCGGTGTGTAAGGC
TTCGACCCAGAATGGAGGTGTGAGATGGGCTTGGAAGAGAAGAGAGCGCACAATGTCGTTTGTAGTGCGAATAAGACGCT
TGGCTTTTCCATTTTGGGGCGAAGTGTGGGGGCAGGAGAAG--ATAGACAATGCCGTTGGAGGAGAAGAAAGAACGGAGA
GAGGAGTTGATGAACTCACCGCCATTGTCACACTGCATGCTCTTGATCACTACGCCAAATTGGGTATGAACAAATGTAAA
GAAGCGTTGTAAGACGGTGGATGTGTCGGATTTATGGCGTAAGGGAAAAGACCACGAGTAATGAGTGTAATCATCGAGAA
TAACTAAGTAGTATTCAAAACCAGAAAAACTTACAACAGGTGAGGTCCACAAATCACAATGAATTAAATCAAAGGGAGTG
TAAGACTTATTGAGGGAAGAAGAAAAGGGAAGCCGGGGCTGCCGGCCCATTTGACAAGCACTACATGGAGTGTGGGGTGG
---CTTATTACAAGTGCTAAGAAAATCTTTAGCTAT------AGAGGAAAAGGAGTGCGCGCCGGGGTGGCCAAGCCGAC
GATGCCA----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-----------S-S-----------S----S---------------S-----SS--S--
---------------------------------------------------S-S-----------------SS----S--
SSSS---S--------------------------------S----------------S-SS-------------------
----S----------------------------------------------------S----------------------
---------------------S---------S-------------------------------------S----------
---------------------------------------S----------------------------------------
--------------------------------------------------S--S--------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-----------------S-------S-------------------------------------S----------------
--S------------------------------S----------S-----------------------------------
-------------S-----------------------------------------------S------------------
--------S--S-----------------S--------------------------------------------------
--------------------------------------------------------------------------------
-S----------------------------------------S------------------------------S------
------------------------------------------------------S-------------------------
--------S------------------------------------------S----------------------------
-----------------------------------------------------------------------------S--
--S-----------------------------------------------------------------------------
--------------------------------------------------SS---------------------S-----S
-----------------------------------S--------------------------------------------
---S---------------------------------------S-------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
------------------------------------------S------------------------------------S
---------------------------S------------------------S---------------------------
---S----S------------------S-------------------------S------------------------S-
-----------------------S--------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------S-----------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------S---------------------------------------------------------
>forward_629
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-------------------------------------------------GAGAATGGCGTCAACGATGC-----------
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>reverse_1929
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--------TCATCTCGACGGCAACAGG-----------------------------------------------------
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-----------------------------------------------------------------------
>forward_732
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------------------------------------------------------------------------GGCACCCT
CGGAAGTGTAAA--------------------------------------------------------------------
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>reverse_2727
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------TATGGTACTCAGCCTCCCGT------------------------------------------------------
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-----------------------------------------------------------------------
