>input_sequence_50577
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-----------------------------------------------------------------------ATGGCGTCG
CCCATGCTCTCCACCGCCATGGCGCCACTCCAGGTATGTCCAC---GTTCCATTCCATGCTTGCGTCCTACAGTTCTTCC
ATGTTTGTCACGCACGGTTATGTAAGTGATTTGCGTCCA---------ACTCGATC--------CAGGGGGGCATGCTGG
AGTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCC
TTCAGGACATACGCGGTATGACATGATCGGTGGAATGTAG---CTTGCTTGGTCGCGTGCCATGGGAGCGTGTGTGCGTG
ACGCGGCGGTGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCG
ATCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGAT
CGCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGG
ACGTCAAGCCCGTGGGCGACAACGCCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAAC
CTGCCGTGGGGCGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCA
TCTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACG
CCGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTG
CTCGACCAAAAGTTCGGTACGTGCCCGTCCCCTCTGTCTCTCAAGT---CTCCACTGAATCAACTTCTTTAAGTAACTAA
AAAAATGGCGGCGGCTATGGCGCAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCT
ACTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGCGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCA
AGGCCGTGGCGCTGGTGCTCCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTC
CGTCGTCGACCTCGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCA
ACGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCCGGTGCTCCGACGTGTCCTCCACC
ATCGACGCGTCGCTCAG-------------------------------------------------------------CA
TGGTCATGGGCGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTC
GCCGACATCGTCGCCAACCAATGGAAGTGA--------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>chr2D_1_TraesCS2D01G322900
GGCTCAAGGGCGAAGCCGGGCGCGACGTGTGATGAGTTTTTATTTGTTGAACTATATAATTTGTATTGAATGATTTGTTG
TTGCACTATTTTGTTGAAGTATTTGATTTTCTATGATGAACTATGTGATAAAAAAATATTTATGTTGATAATTGAACGCC
GAACCACGACGAACCGCGCCGAATATGGGCATATTCTCGCCCATATGGGCCCTTTATTCGCCGAAAGTGGGCCGAAAAAT
GAGGCAATATCGGTGCCTGGGGGCGACGGTTGGATACCCAACCGCCTCCAGCGCCGATTGTATCGCCGGCTCGCCCCAGG
GGCGATTTTTATGCGTCCTGGGGAGTCAACGGCTGAAGATGCTCTAAAAAGCAGAGCTGAAGAGAGCAGTGCCGGCGCCA
GCCCTCGTGTCTCCGCCAGAGAACAGGGGCAAGGAAAGGTGAAAAGGCTTTACTTTTTCCTTTTGCGAATGAAAAAGGCT
TTACTTCAACTGCCATGATTCAGAAGTCCTCAGCTTCCTGACGACCCGTTATTGACAATCTTTATATGGCCAGCTCATAA
CGTTTAAC-TTTGTCGAGTCACCCCCGAAACTCCGATCGGAACGGTGCTCTGCTCGACGTCCAGAGGATGGAACGCAGAA
TATCCAT----CGAGCGGGCATTACATCAACAATACAGGATGGATGTACATTGCAACAAAT-------------------
-------AATCACAAAAGAAATAAAAAAGGAAACTATATGCGATCAGGCACATGACAAAGGAAGGGTCACATGAACGAAG
AAGAGAAAAGCCACATATCGACCGGAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTA
TCCAAAATCTCATCTCTCGCCCAATCGCGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCT
AACTCGTATATACAGCCACGCCCGCCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGATCCTTTGGACATGGCGTCG
CCCATGCTCTCCACCGCCATGGCGCCACTCCAGGTATGTCCAC---GTTCCATTCCATGCTTGCGTCCTACAGTTCTTCC
ATGTTTGTCACGCACGGTTATGTAAGTGATTTGCGTCCA---------ACTCGATC--------CAGGGGGGCATGCTGG
AGTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCC
TTCAGGACATACGCGGTATGACATGATCGGTGGAATGTAG---CTTGCTTGGTCGCGTGCCATGGGAGCGTGTGTGCGTG
ACGCGGCGGTGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCG
ATCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGAT
CGCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGG
ACGTCAAGCCCGTGGGCGACAACGCCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAAC
CTGCCGTGGGGCGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCA
TCTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACG
CCGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTG
CTCGACCAAAAGTTCGGTACGTGCCCGTCCCCTCTGTCTCTCAAGT---CTCCACTGAATCAACTTCTTTAAGTAACTAA
AAAAATGGCGGCGGCTATGGCGCAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCT
ACTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGCGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCA
AGGCCGTGGCGCTGGTGCTCCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTC
CGTCGTCGACCTCGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCA
ACGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCCGGTGCTCCGACGTGTCCTCCACC
ATCGACGCGTCGCTCAG-------------------------------------------------------------CA
TGGTCATGGGCGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTC
GCCGACATCGTCGCCAACCAATGGAAGTGAACGCCGGACGGCGGCGGCATTGCCCTGTGAAGTGACTCCTCTCGAAATTT
TCCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCAGAGTATCGAGCTCCCAACAGCTTCTTTTTTTTT
CCTTTCTTTTCTTGTTCTTCTTTTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAG
GAAGTCTCAACGCTGTGCATCTGTAATATATACGTACTATCGTTTGCCAGGTTCTGATGTAGAATTCAACTTGTTCTTCG
A------ACATTTCCATCGTTTTGACCTTTACTG--CTATCTAAACATGCATGATCAACTCAGAAAGAAAAGTTTGAACC
ATACACGAAAGTTACCATAAAATG--AAAAGTTTGAACTTCTGATGGGAATTGCAAAATTTAAGGGAGCACAACCATGCA
GCCCATTATCAGAGTTTTTATGTTATTTTTGCGAAAACTCATTATCAGAGTTATCCACACAAATTGATTCACAAGATAAG
AGATTGCGATCTGCG-----AACCTAGGTGGATGATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGG
TCGTATTTTCGTTGGACATCATGGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAGAGCGTGTGAGTGG
TCAAGAATATATGGAAATCATGAGGGATAAATATTGCTGACCATACAATGCACAGACCACAG-GGGTGTCGTTCCGCTCT
GAAGCACTCAAATGGATCAAAACATCTCGAATCTCTATACCCAAATGGCCCGTGTCTAACTTAATAGAATCAAGATATTT
AGAATTCAGAGTTGAGCTCTCTCTACTCAATGCCCCATGATGAGACATA-----TGCAGTCTTTATCGATGAAATAGCAA
GTACTAAGAACCATTCAAGTAAATTCTAGTACAAGCTAACATGATATATTGAACTTCAACCAGGGTTCTTCGGATGACAC
TAAATACACTAAGTG
>chr2A_518
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------CTGAGGACCCATTATTGAC-ATCTTCATATGGCCAGCTCACAA
CGTTCAACGTTTGTCGAGTCACCCCAGAAACTCGGATCGAAACGGTGCTCTGCTCGACGTCCACAGAACGGAACGCACAT
TATCCAGCGAGCGAGCGAGCATTACATCAACAATACAGGATGTATGTACATTGCAACAAAT-------------------
-------AATCACAAAAGAACAAGAAAAAAAC---ATATGCGATCAGGCACATGACGAAGGAAGGGTCACATGAATGAAG
AAGCGAAAAGCCACATATCGACCGGAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTA
TCCAAAATCTCATCTCTCGCCCAATCCGGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCT
AACCCGTATATACAGCCACGCCCGCCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGACCCTTTGGACATGGCGTCG
CCCATGCTCTCCACGGCCATGGCGCCACTCCAGGCATGTCC--CATGTTCCATTCCATGCCTGCGTCCTACAGTTCTTCC
CTGTTTGTCACGCACGGTTCTGTAAGTGATTTGCGTCCA---------ACTCGAATACTCGATTCAGGGGGGCATGCTGG
AGTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTTTCC
TTCAGGACGTACGCGGTATGACATGATCGGCGGAATGTAG---CTTGCTTGGCCGCGTGCCATGGGAGCGTGTGTGCGTG
ACGCGGCGGCGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGCAAGGCGCCGACGGAGGCCAAACTCAAGGTGGCG
ATCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGAT
CGCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGG
ACGTCAAGCCCGTGGGCGACAACGCCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAAC
CTGCCGTGGGGCGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCA
TCTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCGCCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACG
CCGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTG
CTCGACCAAAAGTTCGGTACGTGCCCGTCACCCCGTCCCGTCTCTCTCCCTCAACTGAATCAACTTCTTTAAGTAACTAA
AAA--TGGCGGTGGCAATGGCGCAGGCATCATCAAGGGAACCATGACCACAACCCACTCCTACACCGGCGACCAGAGGCT
GCTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGTGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCA
AGGCCGTGGCGCTGGTGCTGCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTC
CGTCGTCGACCTCGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCA
ACGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACC
ATCGACGCGTCGCTCAG-------------------------------------------------------------CA
TGGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTC
GCCGACATCGTCGCCGACCAATGGAAGTGAACGCCGGACGGCGGCATTATTGCCCTGTGAAGTGACTCCTCTCGAAATTT
TCCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCGAAGTATCGAGCTCCCAACAGCTTCT-TTTTTTT
CCTTTCTTTTCTTGTTCTTCTTTTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAG
GAAGTCTCAACGCTGTGCATCTGTAATATA----TACTATCGTTTGCCAGGTTCTGATGTAGAATTCAACTTGTTCTTCG
A------ACATTTCCATCGTTTTGACCTTTACTG--CTATCTAAACATGCATGATCAACTCAGGAAGAAAAGTTTGAACC
ATACACGAAAGTTACCATAAAATG--AAAAGTTTGAACTTCTGATGGCAATTGCAAAATTAAAGGGAGCACAACCATGCA
GCCCATTATCAGAGTTTTTATTTCATTTGTGCGAAAACTCATTATCAGAGTTGTCCACACAAACTGACTCACAAGATAAG
AGATTGCGATCTGCGCGCCGAGTCTAGGTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGG
TCGTATTTTCATTGGACATCATGGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAG--TGTGTGAGTGG
TCAAGAATACATGGAACTCATCAGGGATAGATATTGCAGACCATACAATGCACAGACCACAGAGGGTGTCTTTCCACTCT
GAAGCATTCAGATGGATCAAAACATCTCGAATCTCTATACCCAAATGGCCCGTGTTTAACTTGATAGAATCAAGATATTT
AGAATTCAGAGTTGAGCTCTCTCTACTCAATGCCCCATGATAAGACATACTGTATGCAGTATTTATCGATGAAATAGCAA
GTACTAAGAACCATTCAAGTAAATTCTAGTAGAAGCTAACATGATATATTGAACTTCAACCAGGGTTCTTTGGATGACAC
TTCATACGCTAAGTG
>chr2B_560
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
CGTTTAAC-TTTGTGGAGTCACCCCCGAAACCCCGATCGGAACGGTGCTCTGCTCGACGTCCCGAGGATGGAACGCAGAA
TATCCATCGAGCGAG----CATTACATCAACAATACACGATGTATGTACATTGCAACAATAATCACAAAATCCTCGAAAG
AAAAAAAAATCACAAAAGAACAAGAAAAAAAC---ATATGCGATCAGGCACATGACGAAGGAAGGGTCGCATGAATGAAG
AAGAGAAAAGCCACATATCGACCGGAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTA
TCCAAAATCTCATCTATCGCCCAATCGCGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCT
AACTCGTATATACAGCCACGCCCGCCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGATCCTTTGGACATGGCGTCG
CCCATGCTCTCCACGGCCATGGCGCCACTCCAGGTATGCTGTTCATGTTCCATTCCATGCTTGCGTTGCGTACTGCTTCC
CTGTTTGTCACGCACGGTTATGTAACTGGACTGCCATCATCTGTGATTACTCGATC--------CAGGGGGGCATGCTGG
AGTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCC
TTCAGGACATACGCGGTATGACATGATCGGTGGAATGTAGTTGCTTGCTTGGTCGCATGCCATGGGAGCGTGTGT--GTG
ACGCGGCGGTGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCG
ATCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTCAT
CGCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTCGGCATCTTCGACGCGG
ACGTCAAGCCCGTGGGCGACAACGCCATCTCCGTCGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAAC
CTGCCGTGGGGTGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCA
TCTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACG
CCGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTG
CTCGACCAAAAGTTCGGTACGTGCCCGTCCCCTCTGTCTCTCAAGT---CTCAGCTGAATCTACTTCTTTGAGTAACTAA
AAA-ATGGAGGTGGCAATGGCGCAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCT
GCTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGCGCCGCGGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCA
AGGCCGTGGCGCTGGTGCTGCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTC
CGTGGTCGACCTTGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCA
ACGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACC
ATCGACGCGTCGCTCAG-------------------------------------------------------------CA
TGGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTC
GCCGACATCGTCGCCAACCAATGGAAGTGAACGCCGGACGGCGGCA---TTGCCCTGTGAAGTGACTCCTCTCGAAATTT
TCCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCAGAGTATCGAACTCCCAACAGCTTCT-TTTTTTT
CCTTTCTTTTCTTGTTCTTCTTTTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAG
GAAGTCTCAACGCTGTGCATCTGTAATATA----TACTATCGTTTGCCAGGTTCTGATGTAGAATTCAACTCGTTCTTGG
ATTTGGAACCTTCCCATCATTTTCACCTTTATTG--CTATCTAAAAATGCATGATCAACTCACAAAGAAAAGTTTGAACC
ATACACGAAAGTTACCATAAAATG--AAAAGTTTGAACTTCTAATGGCAATTGCAAAATTTAAGGGAGCACAACCATGCA
GCCCATTATCAGAGTTTTTATGTTATTTTTGCG-AAACTCATTATCAGAGTTATCCACACAAATTGACTCACAAGATAAG
AGATTGCGATCTGTGCGTCAAACCTAGGTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGG
TTGTATTTTCGTCGGACATCATGGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAAAGTGTGTGAGTGG
TCAAGAATATATGGAAATCTTGAGGGATAAATATTGCAGACCATACGG---ACAGACCACAG-GGGTGTCTTTCCGCTCT
GAAGCACT---------------------------------CAAATGGCCCGTGTCTAACTTAATAGAATCAAGATATTT
AGAATTCAGAGTTGAGCTCTCTCTACTCAATGCCCCATGATGAGATA-----TATGCAGTCTTTATCGATGAAATAGCAA
GTACTAAGAACCATTCAAGTAAATTCTAGTGCAAGCTAACATGATATATTGAACTTCAACCAGGGTTATTTGGATGACAC
TACATACGCTAAGTG
>chr2D_2142
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--------------------------------------CTCAACGGGAT--CGCTCCGGGTGCCCACCCCCAAACGTATC
CGTGGTCGACCTCGCGGTGCAGGTCTCCAAGAAGACCCTCGACGAGGAGGTGAACCAGGCGTTCCACGACGGCGCGGCCA
ACGAGCTCAATGCCTTCCTCGACGCCTGCCATGAGCCGCTCGTGTCCATTGATTTCAGGTGCTCCGACGTGTCCTCCACC
ATCGACGCGTCGCTCAGCATGATCATGGGAGACGACATGGTAAGGTCATCGCATGGTACGACGAGTGGGGTCGCTCAGCA
TGGTCATGGGAGACGACATGGT-AAGGTCATCGCATGGTACGAC---GAGTGGGGTTACTCCCAGAGGGTAGTCGACCTC
GCCGACACCATCGCCAACCAATGGAAGTGAACGCCG--------CA---TTGCCCTGTGAAGTGACTCCTCA--AAATTT
TCCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCAAAGTGTCAAGCTCCCAACAGCTTCT-TC--TTT
CTTTTGTTTTCTT-------------------------------------------------------------------
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---------------
>chr2D_2716
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----------------------------------TACTATCGTTTGCCCGATTCTGATGTAGAATTCAACTCGTTCTTCG
A------ACCTTTCCATCATTTTGACCTTTTATTGTCTATCTAAACATGCATGATCAACTCAAAAAGAAAAGTTTGAACC
ATAAACGGAAGTTACCATAAAAAATAAAAAAATTGAACTTCTGATGGCAATTGCAAAATTTAAGGGAGCACAACCATGCA
GCTCATTATCAGGGTTGAT-------------------TCATTATCAGAGTTATCCACACAAACTGACTCACAAGCAAAG
AGATTGTGATCTGCGTGCCGAGCCTAGTTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAGCTTTTGTGGG
TAGTATTTTCGTTGGACATCATGGTTCACATGTTTGCCATCCTTTATATATCCTTGGTGCCAATCAG--AGTGTGAGTGG
TCAAGAATACATGGAACTCATGAGAGATGAATATTGCAGGCCATACAATGCACAGACCACAGAGGGTGTCTTTCCACTCT
GAAGCACTCAAATGGATCAAAACATCTCGAATCTCTATACCCAAATGGTTCGTGTTTAACTTAATAGAATCAAGATATTT
TGAATTCAGAGTTGAGCTCTCTGTACTCAATGCCCCATGATGAGACA-----TATGCGGTCTTTATCAATGAAATAGCAA
GTACTTCGTTCAATTCAAGTAATTTC---TAGAAGCTAACATGATATATTGAACTTCGACCAGGGTTCTTTGGATGACAC
TACATA---------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----S--------S-----S--------------S--
--------------------------------------------------------------------------------
-----------------S------------------------S-------------------------------------
--------------------SS-S----SS-SSSS---------------------S------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------S--------------------------SS-------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------S---------------------------
---S-------S---S----------------------------------------------------------------
S-------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
---------------------------------------------SSS--------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
------------------------------SSSS----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------------------------------------------------S------------
------------------------------SSS-----------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------S--------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--S----S-------
>forward_335
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---------------------------------------------------------------------------CCAGG
GGCGATTTTTATGCG-----------------------------------------------------------------
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>reverse_2016
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---------------TATGGCGCAGGCATCATCAA---------------------------------------------
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---------------
>forward_1083
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-----------------------GCCACTCCAGGTATGTCCAC-------------------------------------
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>reverse_2491
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----------CGACGACATGGTCAAGGTCA--------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2377
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--------------------------------------CTCGTGTCCGTCGACTTCC-----------------------
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>reverse_3318
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-------------------------------------TGACCATACAATGCACAGACCA---------------------
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---------------
