>input_sequence_50558
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----------------------------------------------------------------------ATGCCATCCC
CCGCTCTCTGCGCCACCTCCGCCTCCCGACTGCGACTGCTCCTGCCGTCCG------------------CCCCGTCTGCC
CTCTTCCTCCGCGCAGCCGCTGCTTCTGCTGCCCTCGCGCCCGCGAGGCAGAGATCGC---TCTCGACGACGG-------
--CAGGCATGGCGGCGGCCGCGGGAGCGAAGGCGTCGACGCAG---GCGGCGGCGGGCGGGGGCGTGTCCGAGCGCATCA
TGCCGCATCTCCTCAACATGTAACTACTAACTG--CTCAAATCAACCTCTGCTCTGCTCTATTGCTCTGCTTGTGTTGTC
CATGCG-TCCCAGCTTAACTTTATTTATACGCTTCGATTCAATGTCAG---------------AAACGC-AAAAGTTCAG
CTTGCACTGCCAAATTGCTACTGTAATTGATAATTGCTCA----------------------------------------
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--------------------TTGTTCAGTTAA------------------------------------------------
-------GTTGAGCAAGCAATTCACCATGCACGGTCAAATACGAGTAATTGCTAATTGAT----TTATCTCTCCAATGAA
CTTGGGAGTATATATATATATACCTACATAATTA------TCCAGCTCCACTATTTTTCGAATCATTCCGTAGTTATGTA
ATTTTT------TC-AATAGTCTTTCACCGCGGCGCTCATGGCAAATCACCGCAGATACGGATCATGCGCCACGGCACGG
GACTTCGAGATGTACGCGCCCAATGCCACGTTCGAGGACCCGCTTATGCGTGCCCATGGGTATGC----AATTGAGTTTG
TTGTTGCCTGAATTTCTTCTCCATATGATCCATCATCCATGTGCCTTCTTTAATCGAATTCTGTTCGATCTGATCGCAGC
GTCAAGCAGATCAAATCAGCCTTCTACACGATGCCTAAGGTACATATGCACCTTCATATGCT----TTATTCATGGGTGT
TTATTCTTTCTTTTTGATATACATTCGATGTTATTGCATAAACTAATCCAAAGACTCGTGCGTCGTCAGGTATTCGGTGA
GTCCAAGATCGTAGAGTACACGATAAAGGAAAACGCGACCGGACCGGGGAAATCCCAGGTAATCAA---CTCATTTGGAC
ATCACCCTTCTGCATTCGATCGTAGCCACGCATATACTTTGTATAGTAACGATGAACATACTTTACAAACGTGATCGGAA
TATCAATACAATGGGTGGTGCATGACTGCAGATACTGATAGACAACAAGCAACACTACAAGGTCTTTGGCAAGGATGTTG
ACCTAGAGTCCCTCATCACACTCGACGTTGAGGATGGCAAGGTCGTCAGGCACCAGGACTGGTAAGCTACAACAAGCTCG
ATGTTTTCTGTCACCAAACCTAATCATCGAGATGCTACCAT---CTAGCTAGTTAGTGTGTTAATTGTTATAATGCATAT
GCAGGTGGGACAAGAAGCCTCTCAAGAACAGGGAGACGGTGAGCTTCCCGTTGTTGGGACGGCTGGCGCAGACGAGCCGC
CGGGGAGCCATGCTGCTCACTCATGTTCTCATGGGCTTCGGCAAAGACCCCACCCCATGA--------------------
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>chr3D_1_TraesCS3D01G523900
TATACACATTTTTAAAATCTTAAAATACTTAATTAAAAAGATTTAATTCAAGATTAACA--TTTTAATGCATAGTCAACA
TTTTTTCTATACACATTTTTTTTCAAATGCATGATGGACATTTTTGAAAATGAAAGATCAACTAATTTTTAATACATGGT
CTACAATTTTCCTATATAAATTTAACGCTTGTTGCTTGATTACAATGTTTCAAATTCAAGTTTAACATTTTTTACTTCAA
TA--CAACATTGACTTTTTTGATTACATGGTCAAGATTTTTTTAATACACATTTAACA-TTTTTAAATGTTTGCTTAAGA
TTTTCTAAATACATGTTAAATACTTTTTGAATACATGGTCAACACCTTGTCTATAAACGTTAAACCCTTTTTCAAATGCT
TGATTAAGAAAATTCATATACTTATTCAACATTTTTCAAAGGCTTGATAAACATTTTTTAATTATATAATCAACTTTTTT
TCACACACATTCTAAAATTTGTGTATACATGGGAAACATTTTTTCTTTATACAAATTTAACATTTTTTCAAATGCTACGT
TAATATATTTTCAAATATTTGTATGGAAAGTGTTGCTTGTAATATATTTATTTAGTATATTTGGAAGTACAAACGAAAAA
AAGAAAGCAAAAAAACATGAAATTATGCCAGGCCTAGCGAGCTAAAGCGCAGCTTAATTGAATGGGATGCACCTGTTATT
AGTAGGCCTTGAGAACC------------------CCCGGTCAGCGAGCTGATAGGCCCGAACACGAGGTTGGCCGTGGC
CGCTCGGCGTCGTGGAGGCGGTGCCCGCCACCAGATCGGCCGGCCGACGTGGCGCCGTCCTCCGCCGCGCACGCCGTCAA
CCAAGGAACGGACGCGGCTCTGCTACTGCAACTAGTACATTTCAACTCCACCCTTTCCCTTTCGTCTACAACTAGCTAGC
CAAGGTACCCTCCCCTGTTTCGCCTTCTCTCCT------CACCACCGCGCGCGCGTCTGCTCG-CATCGCATGCCATCCC
CCGCTCTCTGCGCCACCTCCGCCTCCCGACTGCGACTGCTCCTGCCGTCCG------------------CCCCGTCTGCC
CTCTTCCTCCGCGCAGCCGCTGCTTCTGCTGCCCTCGCGCCCGCGAGGCAGAGATCGC---TCTCGACGACGG-------
--CAGGCATGGCGGCGGCCGCGGGAGCGAAGGCGTCGACGCAG---GCGGCGGCGGGCGGGGGCGTGTCCGAGCGCATCA
TGCCGCATCTCCTCAACATGTAACTACTAACTG--CTCAAATCAACCTCTGCTCTGCTCTATTGCTCTGCTTGTGTTGTC
CATGCG-TCCCAGCTTAACTTTATTTATACGCTTCGATTCAATGTCAG---------------AAACGC-AAAAGTTCAG
CTTGCACTGCCAAATTGCTACTGTAATTGATAATTGCTCA----------------------------------------
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--------------------TTGTTCAGTTAA------------------------------------------------
-------GTTGAGCAAGCAATTCACCATGCACGGTCAAATACGAGTAATTGCTAATTGAT----TTATCTCTCCAATGAA
CTTGGGAGTATATATATATATACCTACATAATTA------TCCAGCTCCACTATTTTTCGAATCATTCCGTAGTTATGTA
ATTTTT------TC-AATAGTCTTTCACCGCGGCGCTCATGGCAAATCACCGCAGATACGGATCATGCGCCACGGCACGG
GACTTCGAGATGTACGCGCCCAATGCCACGTTCGAGGACCCGCTTATGCGTGCCCATGGGTATGC----AATTGAGTTTG
TTGTTGCCTGAATTTCTTCTCCATATGATCCATCATCCATGTGCCTTCTTTAATCGAATTCTGTTCGATCTGATCGCAGC
GTCAAGCAGATCAAATCAGCCTTCTACACGATGCCTAAGGTACATATGCACCTTCATATGCT----TTATTCATGGGTGT
TTATTCTTTCTTTTTGATATACATTCGATGTTATTGCATAAACTAATCCAAAGACTCGTGCGTCGTCAGGTATTCGGTGA
GTCCAAGATCGTAGAGTACACGATAAAGGAAAACGCGACCGGACCGGGGAAATCCCAGGTAATCAA---CTCATTTGGAC
ATCACCCTTCTGCATTCGATCGTAGCCACGCATATACTTTGTATAGTAACGATGAACATACTTTACAAACGTGATCGGAA
TATCAATACAATGGGTGGTGCATGACTGCAGATACTGATAGACAACAAGCAACACTACAAGGTCTTTGGCAAGGATGTTG
ACCTAGAGTCCCTCATCACACTCGACGTTGAGGATGGCAAGGTCGTCAGGCACCAGGACTGGTAAGCTACAACAAGCTCG
ATGTTTTCTGTCACCAAACCTAATCATCGAGATGCTACCAT---CTAGCTAGTTAGTGTGTTAATTGTTATAATGCATAT
GCAGGTGGGACAAGAAGCCTCTCAAGAACAGGGAGACGGTGAGCTTCCCGTTGTTGGGACGGCTGGCGCAGACGAGCCGC
CGGGGAGCCATGCTGCTCACTCATGTTCTCATGGGCTTCGGCAAAGACCCCACCCCATGATTTAGTCGCTATGATTTGGT
TTCATTCTACTCCGAATACTCCTATCTAGGTGGTTGGAGGTTTTGGGATCCATTTCCATAGACAAAAAAACAAAAGTAAA
AATAGATATATTGTGTACTCCAAAATTATTGTAATGCCA-----------------------------------------
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------------------TTTATCATGATGTATTGAGAAAAAAG-TCAAAAGAAGAGAA--AAAAACATTGTGTTGGTCT
TCTCGGTATAGCTTACATCAATCATGAAGC--TGTGAAACTCGAAGGTTGCTATTGCGAATTAAGGGTAACCAAAGACTA
--------------------GCTTATAGGCACCATAGACGAAAGGCGAGGGTGAAGAGGAAGGTCAAGGGAAGCAGAAGA
GCAAACAAGCACGTCATTGGAGCTCGAAAACCTGGTGAAGTGAGACAATCATGAC-------------------------
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---------------------------------------------CATTTTAGTGTGTAGCTCGGTGGATAGACATGTAA
CGCGTACCCCCGCGTCGCATCCTCTCTTATCTGGGTCGACCCATTTTAGTCATCGGTAGAACTGTTTAAGGACACTTCCC
TTCCGGTTTTGACAAGGTTCTATA-------TAGATCGGGTAATTTTTTACTCTTGTGTTTTTATATTTTGTTTTTTCTT
GTTTCATTTGTGGTTTTCCTTTTTTCCATATGGGAACAATTTCAAAATTTGTGAATATTTATTGAAATTTGAAATGTTGT
TTTAAATACGGGAACAATTTTAAAATTCACGAATATTG-TTTGAAATCCAGGAACATTTTTCCAATTCACAAACATTTAT
GATTTTAACATTTATT-----------------GAAATCTAGGACCATTTTCAAATTTGTGAACATTTAAAAAATGGAGG
AATAAAATTTTCAGATTTGTGAATAATTTTTAAAACCCTTAGAACATTTTTTAGATTCATGGAAATGCGGGATCATTTTT
CAAATTCTTGAA-CATTTGTAAAAACCTGATTTTTTTCAAATTCATGTACAATTTTGTTAAACCCGGGTATATTTTTAAA
ATTTGTGAAGT-TTTTTAAAATATATAAAAAAATCGAGTTT
>chrUn_1
TATACACATTTTTAACATTTTAAAATGCTTAATTAAAAAGAGTTAATACAAGATTAATATTTTTTAATGCATAGTCAACA
TTTTTTCTATAAGCA-TTTTTTTCAAATGCATGATGAACATTTTTGCAAATGAAAGATCAACTATTTTTTAAAACATGGT
CAAAAAAATTCCTATATACATTTTACATTTGTTGCTTGATTACAATGTTTCAAATTCAAGTTTAACATTTTTTAATTCAA
TATACAGCATTAACGTTTTTTATTACATGGTCAACATTTTTT--ATACTCATTTAACATTTTTTAAATGTTTGCTTAACA
TTTTCCA----------------------AATACATGGTTAACATTTTTTCTATAAACGTTAAA-CCTTTTTCAAACGCT
TGATTAAGAAAATCCATATACTTACTCAACATTTTTCAAAGGCTTGATAAACATTTTTTAATTATACAATCAAA-TTTTT
ACACACACATTCTAAAATTTGTGTATACATGGGAAACATTTTTGCTTTATACAAATTTAACATTTTT-CAAATGCTACGT
TAATATATTTTCAAATATTTGTATGGAAAGTGTTGTTTGTAATATATTTGTTTAGTATAGTTGGAAGTATAAACGAAAAA
AAGAAAGCA-AAAAACATGAAATTATGCCAGGCCTAGCGAGCTAAAGCGCGCCTTAATTGAATGGGATGCTCCTGTTATT
AGTAGGCCTTGAGAAGAGCTAATTATGCCAGATAGCCTGGCCCGCGAGCTGAATGGCCCGAACAAA--------------
--CTCGGCGTCGTGGAGGCAGCCCCCGCCACCGGATCGGCCGGCCGACGTGGCGCCGTCCTCCGCCGCGCACGCCGTCAA
CGGAGGAACGC----------GCTACTGCAACTACTACATTTCAACTCCAGAGA--CCCTTTCGTCTACAGCTAGCCAGC
CAAGCTTCCCTCCCCTGTTTCGCCATCTCTTCTCACCAGCACCACCGCGCGCGCGTCTGCTTCCCATCGCATGCCACCCC
CTGCTCTCTGCGCCACCTCCGCCGCCCGACTGCGCCTGCTCCTGCCGTCCG------------------CCCCGTCTGCG
CTCTTCCTCCGCGCAGCCGCTGCTTCTGCCGCCCTCGCGCCGGCGAAGCAGAGGTTATTGTTCTCGACGACGGCGACGAC
AGCAGGCATGGCGGCGGCCGCGGGAGCGAAGGCGTCGACGCAGCCGGCGGCGGCGGGCGGGGGCGTGTCGGAGCGCATCA
TGCCGCATCTCCTCAACATGTAACTACTTCTACCACTCAAATCAACCTCTGCTCTGCTTTACTGCTCTGCTTGTCCAGGC
ATCCCATTCCCAGCTTAACTTTGTTCAGACGCTTCGAT-----GTCACCGCTGTTTGCAGCGCAAACGCAAAAAGTTCAG
CTTGTACTGCCAAATTGCTAATTT--------------------------------------------------------
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----------------CTAATTGTTCAGTTAATTGAGCAAGCAATTTTCTCTTTGAGTAATATATTTACAATTTTCCGAA
AAAAAAGGTCGAGCAAGCAATTGAGCATGCACGATCAAATA------ATTGCTAATTGCTGCTCTTATCTCTCCAATGAT
CTTGGCAGTATATAG-TATATACCTACATAATTG------TCCAGCTCAGATTATTTTTCAATCATTCTGTAGTTACGTA
GTATTT------TCCAATAGTTGTTCATCGCCTCGCTCATGGCAAATCACCGCAGATACGGATCATGCGCCACGGCGCGG
GACTTCGAGATGTACGCGCCCAATGCCACATTCGAGGACCCGCTCATGCGCGCCCACGGGTATGC----AATTAAGTTCG
GTGTTGCCTAATTTTCTTCTTCAGATGATCCATGCC-------CCTTCTTTAATCGAATTCCGTTCGATCTGATCGCAGC
GTCAAGCAGATCAAATCAGCCTTCTACACCATGCCTAAGGTATATATGCACCTTCACATGCTTTATTTATTCATGGATAT
TTATTATTTCTTTTTGATATACATTCAATGTTATTGCACAAACTAATCCAAAGGCTCGTGCTTGATCAGGTATTCGGTGA
GTCCAAGATCGCAGAGTACACGATAAAGGAAAACACGACCGGACCGGGGAAATCCCAGGTAATTAAAAGCTCAT------
------CTTCTGCATTGGAGCGTCACCACACATACACTCTGTATGGTAACAATGTACATATTTTATAAACAAGATCGGAA
TATCAATGCAATGGGTGATGCATGAATGCAGATACTGATCGACAACAAGCAGCACTACAAGGTCTTTGGCAAGGATGTCG
ACCTAGAGTCCCTCATCACACTCGACGTCGAGGATGGCAAGGTCGTCAGGCACCAGGACTGGTAAGCTAGAACAATATTT
ATCTTATCTGTCACCAAACATAATCACCGAGACGCTACCATCTACTAGCTAGTTAGTGTGTTAATTGTTAGAATGTATAT
GCAGGTGGGACAAGAAGCCTCTCAAGAACAGGGAGACGGTGAGCTTCCCGCTGTTGGGACGGCTGGCGCAGACGAGCCGT
CGGGGAGCCATGCTGCTCACCCATGTTCTCATGGGCTTCGGCAAGGACCCCACCCCGTGATTTAGTCGCTATGATTTGGT
TTCATTA-ACTCCGAATACTCCTATCTAGGTGGTTGGAGGTTTTGGGATCCATTTCCATAGACAAAAAACCAAAAGTAAA
AATAGATATATTGTGTACTCCAAAATTACAGTAATGCCA-----------------------------------------
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------------------TTTATTATTATGTA------------------------------------------------
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>chr3A_785
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-------CGTCGTGGATGCGGTGCCCGCCACCGGATCGGCCGGTCGACGTGGCGCCGTCCTCCGCCGCGCACGCCGTCAA
CCAAGGA----------CTCTGCTACTGCA---ACGACATTTCAACTCCAGAGA--CCCTATCGTCTACAACTAGCCAGC
CAAGCTACCCTCCCCTGTTTCGCCTTCTCCTCTCG------CCACCGCGCGCGCGCCTGCTCG-CATCGCATGCCACCCC
CCGCTCTCTGCGCCTCCTCCGCCGCGCGACTGCGACTGCTCCTGCACCAGCCGTCCACGGCGACGACCACCCCGTCTGCG
CTCTTCCTCCGCGCAGCCGCTGCTTCTGCCGCCCTCGCGCCCGCGAGGCAGAGATTATTGTTCTCGACGACG--------
----GGCATGGCGGCGGCCGCGGGAGCCAAGGCGTCGACGCAGC---CGGCGGCGGGCGGGGGCGTGTCGGAGCTCATCA
TGCCGCATCTCCTCAACATGTAACTACTAACTG--CTCAAATCAACCTCTGCTCTGCTT-------------GTGTTGTC
CATGCA-TCCCAGCCTAACTTTATTCATACGCTTCGATTCGATGTCATCACTGTTTGCAGCGCAAACGC-AAAAGTTGAG
CTTGCACTGCCAGATTGCTACTGTAATTGATAATTGCTCAGGGCATCTCCAGCCGCGCCCCAGGAAGAACTTCCCAGGCG
ATTTTTTCGCGCCGGCGTAAAAAAAACGGTCCAGTCGCATCCCCAGGAGCCCAATTTTCGCCGGCCTGGGCCGAAAACAG
CGCCGGCGTACCCAGGCCGAACCCGGCGCGCTGGGGGCGCCGGGGCGAGCTGTTTTGGCGCGAAAAAGCCGCGGGTCAGC
CGCGTCAGCGACACGGCGCCTCGTCTTCCCCCAACGGCCTCGGTTCCCGCGGGGAATCAATGCCAAGGCTGCCGCCGGTC
AGCCTTGCCATTGATTCCTCACGGGCGGCGCGTCACGGGACGGCGTACCGACGCCTCCCCTCCCTCGCACGCGTACACAC
GGGTGCGGCGCGGCTATATAGCCGGTGGCCTGCACTCGCCTGTGCCCACATCAGCCCCGTCCCTCGCCGCCGCCCAGCCC
CTCCCTCTATCTCTCTACCTCTCCCGAGCCCGTCGCCATGGCGGAACGCTTCCCCGGAGACGAGGCGGCGGCCAACGGCT
TCGGCCGCCCTCCTGTTCCAGGGGAACATCCCGGCGCCGCCGGACATGCGCGCCGGGCTGACGGGGTGGAGACTCAGCGC
CGGGGGAGTGCTCATTCCCCCGTTGCCCGACGCCGTGGCGAAGCCGAAGTACTTCGCCGAGGAAGTCGAGGTCATGCGCG
CCTCCCTCACCGACGCCCAACTCTCCCTCCCCCAGCACGCCGCCGACAATCACGCGGCTTGGGCGGCGTATTTCGAGCGC
CGCCAGCAGCAGCGCTTGGCGTCCATCAACGGCGCGCCGGTGGTCGGCGGCCGGCAGAACAGCGAGGGGCGCCACCTGTG
GTGGGGCGTCCCCGACCGCACACTCGAGGGCGTGTTGACATACCTCGAGGGCGGCAACGACCCGCCGTTGGCGTACCTGG
CGAGGGCGGCCGCCCCAGCGCAGCACCGACGCGCCGGGCCATGGGCGCCAAGGAGGTTCGGGTCCTCCTCCTCTTCTTCC
TCCTCCCGATCTTCATCGCACTCCTCCGGCACTCCGGCCTTGCTCGGCGTCAAGGCCGAGCCCGCGGCGGAGACGCCGCT
CGGGCGACGCACTCGCAGCGCCGGCATCGTCATCAACGAGGACGACCGGCGCGCCTACTCGTCGGCTCCTCCTCCGCGCT
TCATCAAGCCAAAGACGGAGCCAGGGCTCGCGCCGGTGAAGAAGGAGCCGGCCGCGCCGGTGACGACGGAGCTCGACGAC
GACGACGCGGCCCTGGAATGGGCGCGCAGGGACTCCATAACGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCGCCA
GTGCGCCGCCCTGCTTCGCTTCGCGGAGCGTCGACGCGGCCGCGACGAAGGCGGAGTCGTCGTCATCTACGACAGCGACG
ACGACGACGACGATGCGCCGCCACCAGTCCGCCATGGCGACGCCGGGCAGGGGTCCAGCAGGGGCGCCCGCGTCAAGGAG
GAGAAGGCCGCCGACGACGATGGCGGCGACGGCGGCGACTTAAGCCAGTTTTTCCTTTAGATTAGTTTATGTATATGTGC
TATGTAATGAAAATCCACAAACTTCGCTGAAATGTGCCGAAATTTATCGTGCTTGGCCGAAATTTATCGTGTTTGGCCAA
AATTTATCGTGTTTAAGCCGAACTTCGCCGAACTTCTTTTATTTTAAAACGTGCCCGAGGACGGCCTTGGGGCCGGCGGC
TGGGGACCAACTTGCCCCCAGGCCCAATTTTTACGGCGGTTCACCCCCAGGCGGCGATTTTAGGCGCCCCCTGGAGGGCC
AACGGCTGGAGATGCCCTCATTGTTCAGTTAA------------------------------------------------
-------GTTGAGCAAGCAATTGACCATCA-------------AGTAATTGCTAATTGCT----GTATCTCTCCAATGAA
CTTGGCAGTATATATATATATACCTACACAATTGTCCAGGTCCAGCTCGACCATTTTTCAAATCCTTCTGTAGTTATGTA
AAAAAAAAAAAATC-AATAGTCTTTCACCGCATCGCTCATGGCAAATCGCTGCAGATACGGATCGTGCGCCACGGCACGG
GACTTCGAGATGTACGCGCCCAATGCCACATTCGAGGACCCGCTCATGCGCGCCCACGGGTATGTATGTAATTGGGTTTG
TTGTTGCATGAACTTCTCCTTCATATGATCCATCATCCATGTTTCTTTCTGAATCGAGTTCCGTTCGATCTGATCGCAGC
GTCAAGCAGATCAAATCAGCCTTCTACACCATGCCTACGGTACATATGCACCTTCATATGCTTTATTTATTCATGGATAT
TTATTCTTTCCTTTTGATATACATTCGTTGTTATCGCATAAACTAATCCAAAGACTCGTGCATTGTCAGGTATTCGGTGA
GTCCAAGATCGTAGAGTACACGATAAAGGAAAACACGACCGGACCGGGGAAATCCCAGGTAATTAAAAGCTCATTTGGAC
ATCATCATCTTC------ATCGTAGCCGCGCATATACTTTGTGTAGTAACGATGAACATACTTTACAAACGTGATCGGAA
TATCAATGCGATGAGTGGTGCATGAATGCAGATACTGATCGACAACAAGCAACACTACAAGGTCTTTGGCAAGGATGTCG
ACCTGGAGTCCCTCATCACGCCCGACGTCGAGGATGGCAAGGTCGTCAGGCACCAGGACTGGTAAGCCACAACAAGTTCG
ATGTTATCTGTCACCAAACCTAATCATCGAGATGCTACCATCT---AGCTAGTTAGTGTGTTAATTGTTATAATGCATAT
GCAGGTGGGACAAGAAGCCTCTCAAGAACAGGGAGACGGTGAGCTTCCCGCTGTTGGGACGGCTGGCGCAGACGAGCCGC
CGGGGAGCCATGCTGCTCACTCATGTTCTCATGGGCTTCGGCAAGGACCCCACCCCGTGATTTAGTCGCTATGATTTGGT
TTCATTCTACTCCGAATACTCCTATCTAGGTGGTTGGAGGTTTTGGGATACATTTCCATAGACAAAAAACCAAAAGTAAA
ATTAGAGATATTGTGTACTCCAAAATTATTGTAACTAGATGATTCACCGCGCGTTGCTGCGGGAATGTATGGTCAAAAAA
TAAATAGTGATGATTATGTAAAATGATAATTTTCATGGTCAGATTACTCTTTCGGTTACATTGGATAATGTTATGAGTTC
AAGGGAAAGCGCAATTTACTTTTTATTGTCCGGTACATTTCTATGTGTAGGTGCTAACAACAGGAATTCTGCACCAACCA
AAGTTTGGAAGTACATTATCAAAGACATGGTCGTTACGTACTTTCCAAATGTATCAATGCACCAAGTCTCAAGACAGCAA
TTTCCATGGCAAATAGTTTATTTATCTATTCTTTAACCATCTTATCCCTCCAATAATTTGGTTGCCTTTTCTCCATTAGC
ATTGCAAGGCAAATGAAAAATCCAAGAAAAATACGACCATATTCCTTGACATGAGCACTTGAGCCGGCAGAAGATTTCCA
AGGCAAATTGAAATGGACTAGAAACTTGAGAGGTGCCCATCAGCTGTTTGCAATCTTTCAGTGCGGGAAAAAGTGCAGGT
ATTCACTCCACTTGTTTGACCAAGAGAGCCCTCAACTTTTAATATGCCCGCCAAAAGACTAAGGCACGCCATGGAATCAG
GAGACCTGCTGATTAGTACCAGTAGATGTCAATAAGGATGCTCGTAGTTACACAAAATACTCCCAATATGCAATCCCAAT
ACAAAATATAGCAATAGATGTATTACTATTCCCAACAAAAAGATAGATCACACGACGTCATGCATGGGAGGAAGAAAGAC
AAATGCATCAAGTAGCAGAACAGGGCAAGAACACAACCCACTTTTTATTTTTTGCATTTATTCTCAGCATAGAAGAATTA
TACAATTAGAACAAAAAATGCTGCCATGAGACAGTACATAAAAGATTCCTTGCCACCGGACCACAAATGAAAGGCAACAA
TATTGCAAGTGAGAGTAATAAACATGGTCACAAAGCTGATGGCACCTAGATTGGTAATGGCCTATTCGCAAAGGAGAACA
CCCTCAATGTCGTGGTTCTCTAAAGTATTTCATGAAGATTTGCACGCTACTTACAATAAGAAGGGAACATTACTTGGAGA
TGCCAAATCATTTTAGAGCAAACGAAAGATGAAGATTTGAGCACCCACTTCACAACTCCTTTGGCAAATTTTGGGTCATT
CCCATAATCAAATTGAGAAGAAAAAACACAATAATCCAATGAGTCTACACCACCAACAAAAATGAAATTGTGTACATTTT
GATACAAATGTACATATGAATATATCATCAAAGTTCAACAAATTGATATACTCAACCCTTTATAACAGGTGATGCACAAA
TATTGAACCATACATAACCGACGATTATTTGCTAAATTTAGGTGGCAATGGTTACCATGAAGGTCATGATAATGGGAATG
AACAAAGCATTGTAAATGGAAAATCAAAATATGATGTGGAATCCCATACCTTCAAAAGAACTCTACAACGCTGCAAAAGT
AAAACATTGTTGGAACTATGAAGTTTCCTTAGAGGAAAACAAAACTTATATTACCATCATAGTGCAGACATGAAGTATTT
TCAAGCATAAAACAACCATTGGTTGAGAATGATATACCGACGCATGGTGTTTAATGACAGAACATTAATGCACTTTTAGT
ATGCAATCCATATCTTCATCTGCATCCTGTACAGTGTCAAAACAGGAGTGGTGTTACATTAACTTCACTGATTTATATCA
TTGATATCTCAAATTAAAGTTGTCATGTGGCCAAAGCCCCCAGCCAACTTCATGAAAAAGAGAACGGATCTGTGACAACA
CTAAAATAATCATACTGGTATGCATCAGTAATCCTATATGATAAACACATGTGCTTTTGAAATCAATATAATGCAAGAGG
GAACGTTGGATTAAACTTTGCATGACCTGGCAAGCATGACACAATTTTGGAGCAATGGTGCAGACACCAACCTGATGTTG
AAGACTATGGGAGTGATGCCGCTCCACTGTCTGAAGGGGAATTTTTGCGGGAGCACGTGAAGTCGCTGAGAGGCGGCGTC
GTTGTCGCTTTCTGGGCAGCAAGGAGGTGGTGGAGGTCATCCTTCAGGAGGCAGAGTCGTCGACTCCGGGCGCCTAAAGT
CTGCAGCGTAGTGGTCCTGCACAGTATCTCCCTCTTGCCTAACTTCGCCGAACCCCACCCCTCACCATCTCCCACAGATC
AGATCGAGCCGCAGGTGAGGCGGTAGCCAGATGGATGACACGATGGAGGTTGCTCTATCGAGGTCCTCGCGCGCCAGGAG
GAGAGGAAGAGGTGGCACCTTGGCGTGCCTCTGCTCGCCCGCGTGGAGACGCATGGACTGGAGAAACACCGGAGTGCTCG
ACTGCTGGGCATCGATGGTGCCGTTGGTGGTGATTGACGACATCGCCCGTTCTGCTACCAGGAAGAGTAAGAGATAAGAA
GAGATCGATGGATGGGCTTCTCTTATCAGTTATTACGCCGCCTCATCGATTAGGGAAGCCCAAAGGGGTTCGCTTCGGTT
CCCAGCATGATTTAACCCTAAAAACAAAAACCAACACGACTTATTGAAAACATATGCTGATGTGGCGAGCTGGCAAGTGA
AGATAAATAAGAGTAATTGCTGAGGCTGGTCATAGTGGGGAGTAACTTACACTAGTGTCATGCATATGATACTAGCCTAA
GTTACTACCTTCATAATGCAAAGTAACATAATAGTAGTATCTTAGATGGCTTCATTTATTAGCTTGTAGACTCATCTTAT
CTTGGAAAGCGCTATGTTACAGTAACATATTATGTTACCACCTCTCATTAATTACTTGTCACATAAGCAAAAATATCTTG
AAGCGCGCTATGTTACTAGCTAAGTTACTCCCACTATGACTAGCCTGATGTGGCATGGCTGCTGAGTTGGATAGCTTGCA
TGCTTAGAGAAATAAGGTAGTGGGGATGAACTATTTAGGTATTATAGATTATAGATGCCATTTATCATGATGTAATATTT
TTATGTCAATTACTAACGCCCATTACCTCTAACCATGGGGACCAATCAAGTCCACACATGCCCGATGTGTGAGAAATGAA
AAATAGCCTTGTTTGAATTTTATCATGATGCATTGAGAAAACAAATCAAAAGAAGAGAA--AAAAACATTGTGTTAGTCC
TCTCGTTATAGCTTACATCAATCATGAAGC--TGTGAAATTCGAACGTTGCTATTGCGAATTAAGGGTAACCAAAGACTA
--------------------GCTTATAGGCACCACAGACGAAAGGCGAGGGTGAAGAGGAAGGTCATGGGAAGCGGAGGA
GCAAACAAGCACGTCATTGGAGCTCGAAAACTTGGTGAAGTGAGACGATCGTGAC-------------------------
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---------------------------------------------CATTTTAGTGTGTAGCTCGGTGAATAGACACGTAC
CGCGCACCCCCGCGTCGCGTCCTCTCTTATCTGGGTCGACCCATTTTAGTCATTGGTAGAACTGTTTAAGGACACTTCCC
TTCCGGTTTTGACAAGGTTCTATAACCTTCATAGATCGGGTAATTTTTTACTCT-GTGTTTTTATAATT--TTTTTTCTT
GTTTCATTTGTGGTTTTCCTTTTTTCCACATGGGAACAATTTCAATTTTTTTGAATATTTATTGAAATTTGAAATATTGT
TTTAAATATGGGAACCATTTTAAAA----CGAATATTA-TTTGAAATCCAGGAACATTTTTCCAATTCACA---------
------AACATTTATT-----------------GAAATCTAGGACCATTTTCAAATTTATGAACATTTTTAAAAAGGAGA
AATAAAATTATCAATTTTTTGAATAATTTTTAAAACCCTTAGAACATTTTTTAGATTCATCGAAATGCGGGATCATTTTT
CAAATTCTTGAA-CATTTGTAAAACCCCGA-TTTTTTCAAATTGATGTACATTTTTGTTAAACCCGGGTATGTTTTTAAA
ATTTATG----------------------------------
>chrUn_2612
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------------------TTTATCATGATGCATTGAGAAAAAAGGTCAAAAGAAGACGGGGAAAAACATTGTGTTAGTCT
TCTCGTTATAGCTTACATCAATCACGAAGTTGTGTGAAACTCGAACGTTGCAATTGCGGATTATGGGTAACCAAAGACTA
CAAATGATGCAATGACTCTAGCTTGTAGGCACCACAGAGGAAAGGCGAGGGTGAAGAGGAAGGTCAAGGGAAGCAGAGGA
GCAAACAAGCGCGTCATTGGAGCTCGAAAACCTAGTGCAGCGAGACAACAGTGAAAACCCTAGTGCCACATCAAACCACA
AAACAACCTAGATAGACATTAAATACCCCGACTCGACGGTAACCTTTTTTTTTGTGAAGTGGAATATTACATTCCATTAT
TGAACTTTCGCAGCTAAATATTTCAGTACAAATCTTTGTGCACAGTACACAAGCTGAAAAATGATTGGACTGGTCGTATG
ACTTGGGGTTCACTAACCAGCCATGCACCAAAAGCGGCAAAAGCCATGGGCCATAAGCAACTTGACAACACAAAAATCAA
GGACATTATCTCCTTTGTTTTTTATAAGTGGGGAGATAGTCTCCTCGGTGGCGGTAGCTTGAATTTTTAAAAGGTTTACA
CGACATTCTCCACACAATAGGGTCAAGGTGGTGGGAATGTCCCCCGCAAAAGAAAGGTGGTGGGAATGCCCACAAATAAT
CGTATGTAGTGAACAAAATTTCACTTGCCACATCTCTCCAACCAAATCGACTAGTTCCCCTTAATTTCCCAATGAAAGTG
TTCTCTCACAGTTTATTAACTCCCTTCTGGTCACGCCTCCCCGCTGAAGCTCACACTGCCAATCGCCTTTTCTCCGGTGG
AGCTTTGTCCCAAACGAGCCATTGCCAGTTGAATACACATTGTTTTTGTCAAAAAATGTATACCTTTCGGGAAAAGAAAA
AATGTATGCTTTTTTGGGTAAGAAAGCTAGCCCAATTTTATGTGTGTTGCACTATCACTCCCACCCTACTCCGATATGGC
CCAACGACCCAATTCTGTAAACACCCCATCGCCACAGTGCAGACACAATTTAGTGCCTAGCTCGGTGGATAGACATGTAT
CGTGCACCCCCGCGTCACATCCTCTTTTATCTGGGTCGACCCACTTTATTCGTTGGTAGAACTGTTTAAGGACACTTCCC
TTCCGTTTTGGACAAGGTTCTATAACCTTCCTAGACCAGGTT-TTTTTTACTCT-GTGTTTTTTTCA-------------
-------TTGTGACTTTCCTTATTTTCATATGGGAACAATTTTAAAATATATGATTATGAAATTAGAAC--------TTT
TTTAAATGCGGGTACAATTTTCAAATTCATGAATATTTTTTTGCAATCCAGGAACATTTTTCAAATTCACA---------
------AACATTTTATAATTTGTAACATTTATCGAAATCTAGGAACATTTGCAAATCTGTGAACATTTTAAAAAATGGAG
TAAC-AAATTTAAAATTTGTGATT--TTTTTAAAACCCTTAGAACATTTTTCAGATTCATGGAAATGCAGGATCAATTTT
GAAATTCTTGAAACATTTGTAAAACCAGATTTTTTATCAAATCCATGTACATTTGTGTTAAAACCGGGTATATTTTGAAA
GTTTATGAACAATTTTTCAAATTTATAAA------------
>SNPs
---------------S--S-------S--------------S-----S---------S----------------------
-----------SS--S--------------------S---------S-----------------S-------S-------
-S-S--SS----------S----S--SS----------------------------------------------S-----
------S----S--S-----S-------------S-------SS----S-----------------------------S-
-----S-SSSSSSSSSSSSSSSSSSSSSS----------S----SS--S---------------S-----------S---
-------------S----------S-----------------------------------------S------SS-----
S------------------------------------------S-----------------------S------------
-----------------------------------S-------------S---------S---------S----------
---------S----------------------------------------SS------------------S---------
---------------SS--------------------S--S-S---------SS----------SSSSSSSSSSSSSSSS
SS------------------------------S-----------------------------------------------
----------SSSSSSS-----------------S---------------SSSSSS--------------------S---
----S-------------------------S---------------------------------------------S---
-----------------------S-------------------------------------------------------S
-----------------------------S-------------------------SSS----------------------
---------------------------------------------------------------------S----------
----------------------------------------------------------S--S------------------
-----S-------------------S--------------S------S--------------------------------
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----------------------S----------S-------SS---------------S---------------------
-----S---------------------------S--------------S----------S--------S-----------
--S----------------------------SS-----------------------------------------------
-----------------------------S--------------S-----S-----S-----------------------
--------------------S---------------------S------------------S------------------
-----------------------------S----------------------------------------------S-S-
-------------------------------------------------------------S-S----------------
----------------------------------S----------------------------S----------------
----S-----------S---------------------------------------------------------------
-------S-----------------S-------------S--------------------------------------S-
----------------------------S-----------------------------------------------S---
-----S--------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------S-----------S-----------------------
---------------------------------------------------------------------S----------
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---------------------------------------------------------------------------S----
-----S---------------------------------------S----------------------------------
----------------------------------S------------------------------------------S--
--------------------------------------------------S-----------------------------
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-------------------------------------------------------------------------------S
----S------------------------------------------------S--------------------------
------------------------------------------------------S-----------S--SS---------
--------------------------------------------------S------------------------S----
-------------------------------------S---------------------------------SSSSSSSSS
SSSSSS--------------------------------------------------------------S-----S-----
-------------S------------------------------------------------------------------
------------------------S--S-----------------------S----------------------------
----S----SS------S----S------SSSSSSSSSSSS
>forward_788
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------------------------------------------------CTGATAGGCCCGAACACGAG------------
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>reverse_4088
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-------ACAATGGGTGGTGCATGACT-----------------------------------------------------
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>forward_3394
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--------------AAGCAATTCACCATGCACGG----------------------------------------------
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>reverse_7875
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----------------------------------TAGACGAAAGGCGAGGGTGA--------------------------
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-----------------------------------------
