>input_sequence_50525
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-----------------------------------------ATGGCACCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCC
CCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACCGCCGCCGCGGCCGCGACGACCCCCCCTCCGACACCGACCC
CTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGCCGCCGCGCCCTCCTCCACCCCCTCCGTCGCGGCTGACT
CCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCGACGCCGAGGCGCACCGCCGCCCCGCGCCCAAGCCCGCC
GCCTCCTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTC
TGACGCCGAGGCCGACCGCCGCCTCGCCGCTCCCAAGGCCGCCCCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGC
GCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGCCCGTGGCCTCGGACGCCGACCTCGACCCGGCCGCCGGC
GCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCGCGCCGCCCCCGCGCCGAGGCATCCATCATCAAGCCCAT
CAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCGGCGCCTCTGCCTCCGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCG
CCATATCAGCGCCCTCTCCGGACCCGCTGAAGCGCCCCTCGCGGCTCTGGAGCCATGACGACGAGCTTCTCATCCTGCGC
GGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGTTCCACCAATGACATCGGTAAGCTCCACAGCCACATCCG
TGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGATAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTGCTTG
CCACCCGTGCCAAGAATGGACGGGAGCAGGAGTTGCACACCCCGCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTC
TGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGTGGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATT
GCAATACAGCGGAGATAGCGATGATGATATGGAGAGTCAGCGGGATGACCGCTACCACATCAAGAACCGGAAGGTGAGGC
CAATTACAGCGGCCAATGGCAATGGGATTGGGCTTGGGGCTGTCAATGCCAATGGCAGAGGGAAAAGTGGGCTTGAGAAG
GGGAAGGATGCATATCCCTACCTGTGGGAGACTGTTGAGGAGCTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAA
GGCATTTGAGGTGCTCGAAGGATCAAAAGCACGGGCGATAGAGGAAAAGCTGAGGAGGTTTAGGTTGACGGAGATCAGAC
AGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGATGGTGCTCGATGCCCTTGAGAGTGCTGACTGA------
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------------------
>chr5A_1_TraesCS5A01G234500
TTGACGATACCATGGCGCGAGCACTGCATTCTCCTCCTCTGTCCATTGTCTTTGCGCGAGCACCGCAGCTAGTTCGCCGA
CGGTGTCGCTCGTCCACGACTCCATGCTTGTCATGTCGGACGCCACAGCCACTATCCACCGTAGTCGCCATTGTCCGGCG
CATACTGCACTTCTTATCCCCTTCCCTCTGCTAGCTTTCAACCATGTCTGCTAAGTGAAGTGCTAACTCTTAATCATACC
TCATGCGTGCAACCAAACACCGAGTTCATGTGCCGCTTGGGCCAATGCAGGCAACCAAATAAAGTGCACGTGCGTATTAC
CTAATGCAGGGACCCTAAATGTAGGCAACCAAACAACTCACAGATGTCGCGTATGAGGCTGTTTTTTCAGAGCCAGACTG
GGTTGGGATGTGTATGCAACACAACTACTATTCATTACGGCAACCAAACACGCGCATGTAAATACTGAGATGGGGAGAGA
GAAAATACAAGAGAAAATATGTCTTCTCTTATACCTAACTAAAAGATGATCTCTTATCACAGTTTCTCTCATCATATATG
TTGGGACAACCTTAGTCAAACTTGAACCAGTCTGACTCGAGTCAAAGGAAAACG-GGCCTGGTAGACACCCGGGCGGAGC
GAGCA-CGCCCGGTCGCGCCGACTGTTTGGCAACGAGACCGCCCGGT---------------------------------
CATGCCGCGGACAGGCATTGGCATTGGCATTGCGCACCGCACGGAAGGCCGGCACGGCACCCACCCACCCACCGCGGGCG
TGGGCGTGGCGCATGCCAATCAAGCACGCCCACCCGCCGCACCCAACGACTCGATCGCACGCACCGCGCCG---------
-----------CGCTCTGCCTCTTAAAATATCGGCACCGATGCAGATACAGATTACCCAAGGGCCGCC----GGGCTAGC
AGCAGAGCACAGCACAC--CACA----------GCGCAGA-CCCCCAG-----CGCGAGGGACACGAGGCGAG----AGC
GCCCCAGGCCAGACCTTGCCGCCCCGCCGCCCGCGTCCCGCATGGCACCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCC
CCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACCGCCGCCGCGGCCGCGACGACCCCCCCTCCGACACCGACCC
CTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGCCGCCGCGCCCTCCTCCACCCCCTCCGTCGCGGCTGACT
CCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCGACGCCGAGGCGCACCGCCGCCCCGCGCCCAAGCCCGCC
GCCTCCTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTC
TGACGCCGAGGCCGACCGCCGCCTCGCCGCTCCCAAGGCCGCCCCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGC
GCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGCCCGTGGCCTCGGACGCCGACCTCGACCCGGCCGCCGGC
GCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCGCGCCGCCCCCGCGCCGAGGCATCCATCATCAAGCCCAT
CAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCGGCGCCTCTGCCTCCGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCG
CCATATCAGCGCCCTCTCCGGACCCGCTGAAGCGCCCCTCGCGGCTCTGGAGCCATGACGACGAGCTTCTCATCCTGCGC
GGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGTTCCACCAATGACATCGGTAAGCTCCACAGCCACATCCG
TGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGATAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTGCTTG
CCACCCGTGCCAAGAATGGACGGGAGCAGGAGTTGCACACCCCGCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTC
TGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGTGGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATT
GCAATACAGCGGAGATAGCGATGATGATATGGAGAGTCAGCGGGATGACCGCTACCACATCAAGAACCGGAAGGTGAGGC
CAATTACAGCGGCCAATGGCAATGGGATTGGGCTTGGGGCTGTCAATGCCAATGGCAGAGGGAAAAGTGGGCTTGAGAAG
GGGAAGGATGCATATCCCTACCTGTGGGAGACTGTTGAGGAGCTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAA
GGCATTTGAGGTGCTCGAAGGATCAAAAGCACGGGCGATAGAGGAAAAGCTGAGGAGGTTTAGGTTGACGGAGATCAGAC
AGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGATGGTGCTCGATGCCCTTGAGAGTGCTGACTGAATAATG
GCTGATCGATAGTGATTGGTAAACTGTTGGAAGGGGGAAATCAGTCTTTTTGTTTCTAGATAGACTATATGTGGTTAATT
ACTTACTTCCCTGGACAAGGTTGCAGTTGCCTCCATCAAAATTAGGCATAGAACATGGAGTGATGGTCTTCTCCTTGTTA
TTGTTCATGGATCATTGTATTTTGGGATTCTTAGGTGCTAACTTGTGGTTTATATGCTATTTGGTTGTGTCAAATCAGGG
TTCTTGTATCCTCGTTGTGAATGCTGTGTTCACATATCCCCCCCTTTGTGCTGGGCCTTTTAAATCACATCATCTGCAGG
CTGGTCAATATTGGGTGCTATTGTCTTACGCGCT----------TAGAGTTGCATAATTTTGTGACCATGCTAGGTCATG
TCATTGCGC----TTAATTAGAGTTGCAATGTCTTCCTTTTGATTTCTTCATTG----GCATTTCTAG------------
-----------TTGTAATTGTAGTTGAGAAACAA-CTGCTACTGTGCATGCTTCAGGGCCTGTTAGATTTAAGCGGCGTG
TTATATTTAAGCAAGTTCTTATAGTGAGAATGTTGTTGTTATATTTAAGCAAGTTCTTATAGTGAGAATGTTGTTTATAT
AT--TGTAAAGTTTGCGAGATGTTGCTCCTACCATCCATTATGTAAGGCCTGCCAATTTTGCTTGGATTGAATAAGATGG
----TGTGCTGTGGTTGTTATAGTTGAGGGTCAAAAGTAGTGGT-TAGCTTTAACATGATTCGCTGGTGCTTTCATCACA
TAACACATTCTTTGAAAAGGGGATATTCTGAAGTCGATGCTTTCTC------GGGATGGGAATAGTAGTCTGAAATACAC
CTGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGTTTAATGCC----TATGCTGTTGTGCGGCTGTTATGCGTGTC
TATGTCGGTGAGCTTGTGTTATGCACTTGTGCGTTTTGGTGTCCCCCCATA-----GTTCTCTCATGTCACTGGTGTTTG
ATACGGGTGATTATCTTG
>chr5D_568
AACCTAGC------------------------------------------------------------------------
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----------------CAAACTTGAACCAGTCTGACTCGAGTCAAAAGAAAACGAGGCGAGGTGGACACCCGGCCGGAGC
GAGCACCGCCCGGTCGCGCCGACTGTTTCGCAAGGAGACGGCGAACCCTCTTGGGTCAGTAATTGGCGTGCTGGCCGCCG
CATGCCGCGGACAGGCATTGGCATCGGCATTGCGCACCGCACGGAACGCCGGCACGGCACCCACCCACCCACCGCGGGCG
TGGGCGTGGCGCATGCCAATCAAGCACGCCCACCCGCCGCACCCAACGACTCGATCCCACGCACCGCGCCG---------
-----------C----------TTAAAATATCGGCACCGATGCGGATACAGGTTACCCAAAGGCCGCCGGGTGGGTTAGC
AGCAGAGCACAGCACACACCACAGCCCAGCGCAGCGCAGACCCCCCAGCGCGACGCGAGGGACACGAGGCGAGCGAGAGC
GCCCCAGGCCAGAGCCAGACCTCGCCGCCCCG-----CCGCATGGCGCCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCC
CCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACGGCCGCCGCGACCGCGACGACCCCCCCTCTGACACCGACCC
CTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGCCGCCGCGCCCTCCTCCACCCCCTCCGTCGCGGCCGACT
CCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCGACGCCGAGGCGCACCGCCGCCCCGCGCCCAAGCCCGCC
GCCTCCTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTC
CGACGCCGAGGCCGACCGCCGTCTCGCCGCTCCCAAGGCCGCCCCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGC
GCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGCCCGTGGCCTCGGACGCCGACCTCGACCCGGCCGCCGGC
GCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCGCGCCGCCCCCGCGCGGAGGCATCCATCATCAAACCCAT
CAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCAGCGCCTCTGCCTCGGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCG
CCATATCAGCGCCCTCTCCGGACCCGCTGAAGCGCCCGTCGCGGCTCTGGAGCCATGGCGACGAGCTTCTCATCCTGCGC
GGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGTTCCACCAATGACATCGGTAAGCTCCACAGCCACATCCG
TGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGACAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTACTTG
CCACCCGTGCCAAGAATGGACGGGAGCAAGAATTGCACACTCCTCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTT
TGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGTGGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATT
GCAATACAGCGGAGATAGTGATGATGATATGGAGAGTCAGCGGGATGACCGCTACCACATCAAGAACCGGAAGGTGAGGC
CAATTACAGCGGCCAATGGCAATGGGATTGGGCTTGGGGCTGTCAATGCCAATGGCAGAGGGAAAAGCGGGCTTGAGAAG
GGGAAGGATGCATATCCCTACCTGTGGGAGACTGTTGAGGAGCTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAA
GGCATTTGAGGTGCTCGAAGGATCAAAAGCGCGGGCCATTGAGGAAAAGCTGAGGAGGTTTAGGTTGACGGAGATCAGAC
AGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGATGGTGCTCGATGCCCTTGAGAGTGCTGACTGAATAATG
GCTGATCGATAGTGATTGGTAAACTGTTGGAAGGGGGAAATCAGTCTTTTTGTTTCTAGATAGACTATATGTGGTTAATT
ACTTACTTCCCTGGACAAGGTTGCAGTTGCCTCCATCAAAATTAGGCATAGAACATGGAGTGATGGTCTTCTCCTTGTTA
TTGTTCATGGATCATTGTATTTTGTGATTCTTAGGTGCTAACTTGTGGTTTATATGCTATTTGGTTGTGTCAAATCAGGG
TTCTTGCATCCTCGTTTTGAATGCT------ACATATCCCCCCCTTTGTGCTGGGCCTTTTAAATCACATCATCTGCAGG
CTGGTCAAAATTGGGTGCTATCGTCTTACGC----------GCATAGAGTTGCATAATTTTGTGACCATGCTAGGTCATG
TCATTGTGC----TTAATTAGAGTTGCAGTGTCTTCTTTTTGGTTTCTTGATTCATTGGCATTTCTAGTTGTGTACTCAC
CTTAACTAATCTTGTAATTGTAGTCGAGGAACAATCTGCTACTGTGCATGCTTCAGGGCCTGTTAGATTTAAGCGGCGTG
TTATATTTAAGCAAGTTCTTATAGTGAGAATGTTG--------------------------------------TTTATAT
AT--TGTAAAGTTTGCGAGATGTTGTTCCTACCATCCATTATGTAAGGCATGCCAATTTGGCTTGAATTGAATAGGATGA
----TGTGCTGTGGTTGTTATAGTTGAGGGTCAAAAATAGGGGT-TAGCTTTAACATGATTCACTAGTGCTTTCATCACA
GAACACATTCTTTGAAAAGGGGATATTCTGAAGTCGATGCTTTCTCAGGAT-------GGAATAGTAGTCTGAAATACAC
CTGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGTTTAATGTC----TATGGTGTTGTGCGGCTGTTATGCGTGTC
TATGTCGGTGAGCTTGTGTTACACACTTCTGCGTTTTGGTGTCCCCCCTTA-----GTTCTCTCATCTCACTGGTGTTTG
ATATGGGT----------
>chr5B_686
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CATGCCGCGGACAGGCATTGGCATTGGCATTGCGCACCGCACGGAACGCCGGCACGGCACCCACCCACCCACCCAC--CG
TGGGCGTGGCGCATGCCAATCAAGCACGCCCACCCGC---ACCCAACGACTCGATCGCACGCACCGCGCCGCGCCGCGCC
GCGCCCTGCCTC----------TTAAAATATCGGCACCGATGCGGATACAGGTTACCCAAGGGCCGCCGGGTGGGTTAGC
AGCAGAGCACAGCACAC--CACACCACAGCGCAGCGCAGA-CCCCCAGCGCGACGCGAGGGACACGAGGCGAG----AGC
GCCCCAGGCCAGACCTCGCCGCC-CCGCCCCG-----CCGCATGGCACCCAAGCGCTCCGCCGCCACGGCGTGGGGGTCC
CCGTCCGACGCCTCCGACGCGGAGGGCGACGCGGGCCACCGCCACCGCGACCGCGACGACCCCCCCTCCGACACCGACCC
CTCCAAGACCCCGCCGCCCAACCCTAACCCTAAGTCGTCCGCCGCCGCGCCCTCCTCCACCCCCTCCGTGGCGGCCGACT
CCGCCGCCGCCGGATCCGACTCCGGGGGCACCTACGACTCCGACGCCGAGGCGCACCGCCGCCCCGCCCCCAAGCCCGCC
GCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGCGCTCCCCCGGCATCAACTCCGACTCCTACAACTCCGAGGACTC
TGACGCCGAGGCCGACCGCCGCCTCGCC---CCCAAGGCCGCCGCCTCGTCGCCCAAGCCCGGCGGCAAGCCCAGGGCGC
GCTCCCCCGGCATCAACTCCGACTCCGAGGACTCCGCCGCGCCCGCGGCCTCCGACGCCGACCTCGACCCGGCCGCCGGC
GCCGACTCTGAAGACGACAACGTCTCGCCGCTCCGCTCCGCGCGCCGCCCCCGCGCCGAGGCCTCCATCATCAAGCCCAT
CAGCTCCCGCCCCATGGACTCGCCGCCCCGCGGCAGCGCCTCTGCCTCCGAGCCGCGCGTCAAGCGCCCCCGCAGCGCCG
CCATATCAGCTCCCTCTCCGGACCCGCTGAAGCGCCCGTCGCGGCTCTGGAGCCATGGCGACGAGCTTCTCATCCTGCGC
GGCCTCGCCACATACCGCGCCAAGAGCGGCGTGCTCCCTGGTTCCACCAATGACATCGGTAAGCTCCACAGCCACATCCG
TGCCCAGCTCAGTGTTAGGGTATCCACCACGCAGCTCAGTGATAAGGTCCGGCGCCTCAAGCAGAAGTACCAGTTGCTTG
CCACCCGTGCCAAGAATGGACGGGAGCAGGAATTGCACACTCCGCATGACCGCAGCATCTATGAGCATGCCAAGAAGGTT
TGGGGGTTGGTTGGTAGTGGTGGTGGTGATGGAGGAGGCAGTGGGTATGAGAATTATGGTGGTGGTGATAGTGATGAATT
GCAATACAGTGGAGATAGTGATGATGATATGGAGAGTCAGAGGGATGACCGTTACCACATCAAGAACCGGAAGGTGAGGC
CGATTACAGCGGCAAATGGCAATGGAATTGGACTTGGGGCTGTCAATGCCAATGGCAGAGGGAAAAGCGGGCTTGAGAAG
GGAAAGGATGCATATCCCTACCTGTGGGAGACTGTCGAGGAGCTGTCCAAGGAGCATCCGAGTGGTGCGGCATTCAAGAA
GGCATTTGAGGTGCTCGAAGGATCAAAAGTGCGAGCCATTGAGGAAAAGCTGAGGAGGTTTAGGTTGATGGAGATCAGAC
AGCAGCTGCGTAGGATGGACCTGATGAAGGAGACGGTGAGGATGGTGCTCGATGCCCTTGAGAGTGCTGACTGAATAATG
GCTGATCGATAGTGATTGGTAAACTGTTGGAAGGGGGAAATCACTCTTTTTGTTTCTAGATAGACTATATGTGGTTAATT
ACTTACTTCCCTGGACAAGGTTGCAGTTGCCTCCATCAAAATTAGGCATAGAACATGGAGTGATGGTCTTCTCCTTGTTA
TTGTTCATGGATCATTGTATTTTGGGATTCTTAGGTGCTAACTTGTGGTTTATATGCTATTTGGTTGTGTCAAATCAGGG
TTCTTGCATCCTCGTTTTGAATGCTGTGTTCACATATCCCT-CCTTTGTGCTGGGCCTTTTAAATCACATCATCTGCAGG
CTCGTCAAAATTGGGTGCTAGCGTCTTACGCATTGTTTGCAGCATAGAGTTGCATAATTTTGTGACCATGCTAGGTCAAG
TCATTGTGCTTAATTAATTAGAGTTGCAGTGTCTTCTTTTTGGTTTCTTGATTGATTGGCATTTCCAGTTGTGTACTCAC
CTTAA-TAATCTTGTAATTGTAGTTGAGGAACAATCTGTTACTGTGCATGCTTCAGGGCCTGTTAGATTTAAGCGGCGTG
TTATATTTAAGCAAGCTCTTATAGTGAGAATGTTG--------------------------------------TTTATAT
ATGCTGTAAAGTTTGCCAGATGTTGCTCCTACCATCCATTATGTAAGGCATGCCAATTTGGCTTGAATTGAATAGGAATG
ATGTTGTCCTGTGGTTGTTATAGTTGTGGGTCAAAAGTAGGGGTTTAGCTTTAACATGATTCGCTAGTGCTTTCATCACA
GAACACATTCTTTGAAAAGGGGATATTCTGAAGTCGATGCTTTCTCGTTCTCGGGATGGG---AATAGTCTGAAATACAC
CTGATGGAAACCTTTGTTGATTGTGATCTCTACACATGTTCAATGTCTATATATGCTGTTGTGCGGATGTTATGCGTTTC
TATGTTGGTGAGCTTGTGTTCTGCACTTCTGCGTTTTGGTGTCCCCCCTTGCCTTAGTTTTTTCTTCTCACTGGTGTTTG
ATACCGGTGATTATCTT-
>chr4A_2845
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-------------------------------------------------------AATCTTGTGGCCATGGTAGGTCATG
TCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTAGTTTCTTGATTGATTGGCATTTCTAGTTGTGCACTCAC
CTTAACTAATCTTGTATTTGTAGTTGAGGAACAATCTGCTACCATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTG
TTATATTTAAGCAAGTTCTTATAGTGATAATGTTG--------------------------------------TTTATAT
ATGTTGTAAAGTTTGTGAGATGTTGCTCCTACCATCCATTATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATG
ATGCTGTGTTGTGGTTGTTATAGTTGAGGGTCAAAAGTAGGGGTT-AGCTTTAACATGATTCGCTAGTGCTTTCATCACA
GAACACATTCTTTGAAAAGGGGATATTCTGAAGTCGATGCTTTCTC------GGGATGGGAATAATAGTCTGAAATACAC
ATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGTTTAATGTC----TATGCTGTTGTGCGGCTGTTATGTGTGTC
TATGTCGGTGAGCTTGTGTTATGCACTTCTGCGTTTTGATGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGTTTG
ATACCGGTGATTATCTT-
>chr4A_2845
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-------------------------------------------------------AATCTTGTGGCCATGGTAGGTCATG
TCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTAGTTTCTTGATTAATTGGCATTTCTAGTTGTGCACTCAC
CTTAACTAATCTTGTATTTGTAGTTGAGGAACAATATGCTACCATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTG
TTATATTTAAGCAAGTTCTTATAGTGATAATGTTG--------------------------------------TTTATAT
ATGTTGTAAAGTTTGTGAGATGTTGCTCCTACCATCCATTATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATG
ATGTTGTGTTGTGGTTGTTATAGTTGAGGGTCAAAAGTAGGGGTT-AGCTTTAGCATGATTCGCTAGTGCTTTCATCACA
GAACACATTCTTTGAAAAGGGGATATTCTGAAGTCGATGCTTTCTC------GGGATGGGAATAATAGTCTGAAATACAC
ATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGTTTAATGTC----TATGCTGTTGTGCGGCTGTTATGTGTGTC
TATGTCGGTGAGCTTGTGTTATGCACTTCTGCGTTTTGATGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGTTTG
ATACCGGTGATTATCTT-
>chr4A_2845
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-------------------------------------------------------AATCTTGTGGCCATGGTAGGTCATG
TCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTAGTTTCTTGATTGATTGGCATTTCTAGTTGTGCACTCAC
CTTAACTAATCTTGTATTTGTAGTTGAGGAACAATATGCTACCATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTG
TTATATTTAAGCAAGTTCTTATAGTGATAATGTTG--------------------------------------TTTATAT
ATGTTGTAAAGTTTGTGAGATGTTGCTCCTACCATCCATTATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATG
ATGTTGTGTTGTGGTTGTTATAGTTGAGGGTCAAAAGTAGGGGTT-AGCTTTAACATGATTCGCTAGTGCTTTCATCACA
GAACACATTCTTTGAAAAGGGGATATTCTGATGTCGATGCTTTCTC------GGGATGGGAATAATAGTCTGAAATACAC
ATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGTTTAATGTC----TATGCTGTTGTGCGGCTGTTATGTGTGTC
TATGTCGGTGAGCTTGTGTTATGCACTTCTGCGTTTTGATGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGTTTG
ATACCGGTGATTATCTT-
>chr4A_2845
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-------------------------------------------------------AATCTTGTGGCCATGGTAGGTCATG
TCATTGCGC----TTAATTAGAGTTGCATTGTCTTCTTTTTAGTTTCTTGATTGATTGGCATTTATAGTTGTGCACTCAC
CTTAACTAATCTTGTATTTGTAGTTGAGGAACAATCTGCTACCATGCATGCTTCAGGCCCTATTAGATTTAAGCGGTGTG
TTATATTTAAGCAAGTTCTTATAGTGATAATGTTG--------------------------------------TTTATAT
ATGTTGTAAAGTTTGAGAGATGTTGCTCCTACCATCCATTATGCAAGGCTTGCCAATTTGGCTTGAATTGAATAGGAATG
ATGTTGTGTTGTGGTTGTTATAGTTGAGGGTCAAAAGTAGGGGTT-AGCTTTAACATGATTCGCTAGTGCTTTCATCACA
GAACACATTCTTTGAAAAGGGGATATTTTGAAGTCGATGCTTTCTT------GGGATGGGAATAATAGTCTGAAATACAC
ATGATGGAAACCTTTGTTGATTGTGATCTCTGCACATGTTTAATGTC----TATGCTGTTGTGCGGTTGTTATGTGTGTC
GATGTCTGTGAGCTTGTGTTATGCACTTCTGCATTTTGATGTCCCCCCTTACCTTAGTTTTTTCATCTCACCGGTGTTTA
ATACCGGTGATTATCTT-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS------------------------------S-----------SS---S---------S------
----------------------------S----S-----S--SSSSS---------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
------------SSSSSSSSSS---------------------S-------S-----------------------S----
--------------------------------------------------------------------------------
----------------S------S-SS-S--SSSSSS-------------------------------------------
-------------------------------------------------S------------------------------
---------------------------------------------------------------------------S----
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----------------------------------S---------------------------------------------
-------------------------------------S-------------------S----------------------
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-------------------------------S--------S--------------------------------------S
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
-------------------------------------------------------------------S------------
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------------------------------S-----S--S----------------------------------------
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------S---------S---------------------------------------------------------------
--------S------------S---------SS-----------------------------------------------
----------------------------S-------S-----S------S------------------------------
----------------------------S---------------------------------------------------
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-------------------------------------------------S---------S-----S--------S-----
----------------------------------------S------------------------S--------------
S-------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
----------------------------S-------------------S-----------------S-------------
-----------------S
>forward_147
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-----------------------------------------------GCCACTATCCACCGTAGTCG-------------
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>reverse_2080
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-------------------------------------------------------------------------------C
TGGGGGTTGGTTGGTAGTG-------------------------------------------------------------
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>forward_149
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-------------------------------------------------CACTATCCACCGTAGTCGCC-----------
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>reverse_2179
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------------------CGATGATGATATGGAGAGTCAGC---------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_259
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
TCATGCGTGCAACCAAACA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGGGCTTGAGAAG
GGGAAGG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_380
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CAGATGTCGCGTATGAGGCT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2431
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ACGGGCGATAGAGGAAAAGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_381
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------AGATGTCGCGTATGAGGCTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AGAGGAAAAGCTGAGGAGGT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGTCGCGTATGAGGCTGTTT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2807
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TATCCTCGTTGTGAATGCTGTG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
