>input_sequence_50482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------ATGATGGACGTGAGGGGCTTGAGATTGGGTTATT
TCTTGGTCCTCTGCCTCGTGCCTTTCTTGCGCCATGCCGTGGCTATTCGCTTTGTGATGGACAGGGGAGAGTGCTTCTCT
CACAATGTTGATTATGAAGGGGATACAGTTCATGTATCATTTGTTGTGATCAAGGCAGACACTCCATGGCACTATAGCAA
GGATGGTGTCGATCTCGTGGTAAGGTCTTCTTCTCCCTATGTGCATTACTCCATTAACTTTAGCATGGTGAAATATGTGC
TTGTTGTTGGCAGGGAACGATAACTGGCTAACTGTCATTATTTTTGTAGTTTATCTGTATCCTTCTTTTACTAAGA-GAT
TTTCTGCAAGTCACATCCACTGAAACTGATTCAGTCATGATTTATTGCAGGTGAAAGACCCTAATGGCAATCAAGTCCAT
GATTCTCGTGCCAAGGTTAGTGATAAGTTCGAATTCATAGTTCAGAAGAGAGGTGTCCACCGTTTCTGCTTCACCAATAA
GTCCCCGTATCATGAAACTGTGGACTTTGATGTGCATGTTGGTCATTTTTCATATTTTGACCAGCATGCCAAAGATGGTA
AACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGCACATCAAATGGTGCAGAGACCAGTGTGTGCACCACTAATTCCTTT
GTTCTGAAAAAA-TGGTGCAGAGCATTTTGGTCCTTTGTTTGAACAAATAAGAAAGTTGGATGAAGATCTGTATAACGTT
CTGTTTGAACAGCACTGGCTAACTGCCCAAACAGACCGCCAAGCAATATGTAAGTTTCTCCTCTCACATTCTCTCTTGTA
ACT-TGTAACTACTAGTGCATTGTAATATTTTAAGGCTCTCTTGTCTTCCTCTTTCTCTTTTATCCGAATAGCACCGCTG
AGCTGTAACCTGTAACCTGTAACCATTGGCCAATGTGCGATTCTCCTGATGCTTAATGAAAAATAATTTTTAGCACTGTT
AGGTGCTCCAGCCTGCTATTTGTTCATCTTGTCTGAAGGTGCCAGCACAATCAACTTCAGCAACAGTTAATAC-------
--------------------------------------------------------------------------------
-----------------CATTTACCAACTTGAAAAGATGGCCAGTTTTGAACTTCGGGGGCCACTGGGTACTCCACAACT
AGGATCGTGAGCATGCGTGGCATGTTATATTTTGTATCGACATCATTTTTCTTGCAGAGTTCTTCCATTGCACATTTGC-
-AGTCTTTCTCCCCGATGTCTAACTAATTTCTGCTGTCACGCCAAAATTTTATTTACTCTCTGTTGCATGTTTGAAATCA
CCATAAAAGGCATAGTTGCTAAAGGCGTAATATTTTCCTTATCTATTGTGATGCAGTAAATGAGAACATGAGCACGAGGG
CAATTCACAAGGCACTCCTCGAATCAGCTGCCCTTATTGCAGCCAGTGCTGTGCAGGTCTACTTGCTGCGACGCCTCTTC
GAGCGTAAGCTGGGTACATCTAGGGTCTAA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr5B_1_TraesCS5B01G287700
AAAAAAAAAACACGTAAACCCAAC-AAAAGGCAGAGAAAACCTCTCGTGCGCTGCGCTCTTCTCCCCACCGAAACTCCTC
CTCCGCACCCCCGCCGGAGATCCCCCGGAACCGCTTTCGCCCAAGGTCAGCTCGATCCATCCAATCTCTCAACACGCGCG
TTTCGATTTCGCCG-CCGCCA-CCCCGGATCGATCCCCTCCCCTTCCTCTGAATCGATCGATCAGCCCCGCGGGACAGCT
CGCGTTGGCAATTCGATTTATTTTTTTGGGAGGAAATCGCCCTCTCTCCCCGCCC--GATTCGTGGGATTTCTCGGGGTA
GTCCGAGTTCCGTCCCGTCGTTGTTCGGATGCCGTGGTGCGCGCGCCTTCTGTACACTACTGGTTTCTCATTTCGCTGCC
TGAAATTCACGGAGAGGGTGGACGCCCTCTGATTTTGTTTCCTGGGAGCGCCGTCTAGATCTAGCGGGAATGCTTGGCTC
CTTGCGCTTGTGCCCCAGTTTTGGAGATGGGAAGGTGGTTTAACTCTTACCCTAGGTTACGCGTATCTGTCTGTATCTAT
CGGTATTTTTGCGCCAGTTTTGTTCATCGGTATTTTTCCAGTGATGTGGAAATTTGTACTTGTGCATCTATCCTGTGAAT
GAAGCAATCGCCTGAAATCTGATGCGTTAATTCACTTGTTAATTTTCAGAGTGTGCGGTTTTTTCAGGGTAAACTCTCAT
ACCTAGAGGACCACCTTAATGTCACAATAGCTAGTGCAATGTTGTAATATTGGCATGTAGTCATGTACTCGTGTGGATTT
GAAGTCATGGATCCGTGTGGATCTGAGAAGGAGATGCTCTATGTTGGTCTCCAGTTCGGTGCCCTAGGTTGTCAGAGTTT
TGAGTTGAGAAGCGCTAATCCAACTGTCATGAATGGCCTCATGTAGTTGGACTGCAGTCGTTTGATAATG-TCCCAATCG
TAGTTGGACAGGGTCTAACTTGTTCAATTTTGTCTCTGCCAGTCAGATGATGGACGTGAGGGGCTTGAGATTGGGTTATT
TCTTGGTCCTCTGCCTCGTGCCTTTCTTGCGCCATGCCGTGGCTATTCGCTTTGTGATGGACAGGGGAGAGTGCTTCTCT
CACAATGTTGATTATGAAGGGGATACAGTTCATGTATCATTTGTTGTGATCAAGGCAGACACTCCATGGCACTATAGCAA
GGATGGTGTCGATCTCGTGGTAAGGTCTTCTTCTCCCTATGTGCATTACTCCATTAACTTTAGCATGGTGAAATATGTGC
TTGTTGTTGGCAGGGAACGATAACTGGCTAACTGTCATTATTTTTGTAGTTTATCTGTATCCTTCTTTTACTAAGA-GAT
TTTCTGCAAGTCACATCCACTGAAACTGATTCAGTCATGATTTATTGCAGGTGAAAGACCCTAATGGCAATCAAGTCCAT
GATTCTCGTGCCAAGGTTAGTGATAAGTTCGAATTCATAGTTCAGAAGAGAGGTGTCCACCGTTTCTGCTTCACCAATAA
GTCCCCGTATCATGAAACTGTGGACTTTGATGTGCATGTTGGTCATTTTTCATATTTTGACCAGCATGCCAAAGATGGTA
AACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGCACATCAAATGGTGCAGAGACCAGTGTGTGCACCACTAATTCCTTT
GTTCTGAAAAAA-TGGTGCAGAGCATTTTGGTCCTTTGTTTGAACAAATAAGAAAGTTGGATGAAGATCTGTATAACGTT
CTGTTTGAACAGCACTGGCTAACTGCCCAAACAGACCGCCAAGCAATATGTAAGTTTCTCCTCTCACATTCTCTCTTGTA
ACT-TGTAACTACTAGTGCATTGTAATATTTTAAGGCTCTCTTGTCTTCCTCTTTCTCTTTTATCCGAATAGCACCGCTG
AGCTGTAACCTGTAACCTGTAACCATTGGCCAATGTGCGATTCTCCTGATGCTTAATGAAAAATAATTTTTAGCACTGTT
AGGTGCTCCAGCCTGCTATTTGTTCATCTTGTCTGAAGGTGCCAGCACAATCAACTTCAGCAACAGTTAATAC-------
--------------------------------------------------------------------------------
-----------------CATTTACCAACTTGAAAAGATGGCCAGTTTTGAACTTCGGGGGCCACTGGGTACTCCACAACT
AGGATCGTGAGCATGCGTGGCATGTTATATTTTGTATCGACATCATTTTTCTTGCAGAGTTCTTCCATTGCACATTTGC-
-AGTCTTTCTCCCCGATGTCTAACTAATTTCTGCTGTCACGCCAAAATTTTATTTACTCTCTGTTGCATGTTTGAAATCA
CCATAAAAGGCATAGTTGCTAAAGGCGTAATATTTTCCTTATCTATTGTGATGCAGTAAATGAGAACATGAGCACGAGGG
CAATTCACAAGGCACTCCTCGAATCAGCTGCCCTTATTGCAGCCAGTGCTGTGCAGGTCTACTTGCTGCGACGCCTCTTC
GAGCGTAAGCTGGGTACATCTAGGGTCTAATTTCTACCTCTAGCTCTCCTCACACTCACCAACCCGACTGGACTTCATTA
CTACAGTGTGTGGTTTCAGGATGTTGTACACCCTGTTCAGATATTCATGAGTTTTTTTCTTCGAGGATTTTGTAATTTGG
ATGACACAGTATGGCGCAGCATTAGAGTGCCTTCTGTGTTCCTAGTTGCCCTCCTGAGTTTCAGTTCAGCTATGATATCC
GTCAACACTTGCATACTACTCCCTCTGTTCCTAAATATAAGCCTTTTTAG--AGATTCCAATAAGGGACTACATACGGAG
CAAAATGAGTGAATGTACACTTTAAAATATGTCTAT--ACATCCGTATGTAGTTTGTATTGAAATCTCGAAAAAGAC---
TTATATTTAGAAACGGAGGGAGTAGTATGCGCTAACCGCTTCGTGGCACAATTATGAAAATGTTTGAAACATGAAGATCA
AACAACAAAGCTCTTTGGCCGCATCGGTTGAGGTTTGCTCTGTTCAGTGCTGGTCTGTCACGCCAGAAGTCGCGGGTTCG
AGGGCTCCTAATTTTATGTTTTGGGAAAGTTGAAGTGAATTTTTTTGGTAAATATAAAATAAATAGGGGGATCCTTTTGT
TGTCAAGCCCTCTGAACAACA--AAAAATGGCTGGATTGAACTGAAAGGAGTGGACTGCCAGCCCAGACCTGCTAGTCTG
CTTCAGTACCCTTTATATGG-CAAACACAGGCCATGTTTCCAATGATAAAGAGATAATTTAGTTTGAATTATCCA---AT
CTTGTGATTCTGGTATGATTCCTTGATCTGATTGCCTGGACTTACAAGAGATCTCAATCGTCAGACGGTGCCAAATCCAA
GGAGAAGAAACAGTTGGAACCCATGTGCAGCCCAGCCTCACTTAACTCACAATTCCTCTTCTCTCTAGATTTGATTGGCT
CCACAGCTTCTCAGACTGATGATGATTTGAAAAGT-CCAACATGATTGGCAACTTGGCATGGCCGTCTCTCTCTCACTGC
ATCG-
>chr5A_15
--------------TAAACCCAACAAAAAGGCGGAGAAAACCTCTCGTGCCTTGCGCTCTTCTCCCCACCGAAACTCCTC
CGCCGCACCCCCGCCGGAGATTCGCCGGAACCGCCTTCGCCCAAGGTCAGCTCGATCCATCCAATCTCCAAGCACGCGCG
TTTCGATTTCGCCCACCGCCA-CCCCGGATCGATCCCCTCCCCTTCCTCTGAATCCATCGACCGGCCGCGCGGGACAGCT
CGCGTTGGCAATTCGATTTGTTTC--TGGGAGGAAATCGCCCTCTCTCCCGCGGCTAGATGCGTGGGGTTTCTCGGGGTA
GTCCGAGTTCCGTCCCGTCGTTGTTTGGATGCCGTGGTGCGCGCGCCTTGTGTGCGCTACTGGTTTCTCATTTCTCTGCC
TGAAATTCACGGAGAGGGAGGACGCCCTCTGATTTTATTTCCTGGGAGCGCCGTCCAGATCTAGCGGGAATGCTTGTCTC
CTTGCGCTTGTGCCCCAGTTTTGGAGATGGGGAGGTGGTTTAACTCTTACCCTAGGTTAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TCGTGTGGATTC
GAAGTCATGGATCCGTGTGGATTTCTGAAGGAGATGCTCTATGTTGGTCCTCAGTTCGATGCTCTAGTG-----------
--------------------CAACTGTTTTGAATGGCATCATGTAGTTGAATTGCAGTCGTTTGATAATG-CCCCAATCG
TAGTTGCACAAGGTCTAACTTGTTTAATTTAGTCTCTGCCAGTCAGATGATGGACGTGAGGGGCTTGAGATTGGGTTATT
TCTTGGTCCTATGCCTCGTGCCTTTCTTGCGCCATGCCGTGGCTATTCGCTTTGTGATGGACAGGGAAGAGTGCTTCTCT
CACAATGTTGATTATGAAGGGGATACAGTTCATGTATCATTTGTTGTGATCAAGGCAGACACTCCATGGCACTATAGCGA
GGATGGTGTCGATCTCGTGGTATGGTCTTCTTCTCCATATGTGCATTACTCCATTAATTTTAGCATAGTGAAATATGTGC
TTGTTGTTGGCAGGGAACGATAATTGGCTAACTGTCATTACTTTTGTAGTTTATCTGTATACTTCTTTCACTAAGATGAT
TTTCTGCAAGTCACATCCACTGAAACTGATTCAGTCATGATTTATTGCAGGTGAAAGACCCTAATGGCAATCAGGTCCAT
GATTCTCGTGCCAAGGTTAGTGATAAGTTCGAATTCATAGTTCAGAAGAGAGGTGTCCACCGTTTCTGCTTCACCAACAA
GTCCCCGTATCATGAAACTGTGGACTTTGATGTGCATGTTGGTCATTTTTCATATTTTGACCAGCATGCCAAAGATGGTA
AACA----------CTCACTCTCTCTCTCTCTCTCACATCAAATGGTGCAGAGACCAGTGTGTGCACCACTAATTCCTTT
GTTCTGAAAAAACTGGTGCAGAGCATTTTGGTCCTTTGTTTGAACAAATAAGAAAGTTGGATGATGATCTGTACAACGTT
CTGTTTGAACAGCACTGGCTAACTGCCCAAACAGACCGCCAAGCAATATGTAAGTTTCTCCTCTCACATTCTCTCTTGCA
AGCATGTAAGTACTAGTGCATTGTAATATTTTAAGGCTCTCTTGTCTTCCTCTTTCTCTTTTATCCTAATAGCACCTCTG
AG-------CTGTAACCTGTAACCATTGGCCAATGTGCGTTTCTCCTGATGCTTAATGAAAAATAATTTTTAGCACTGTT
AGGTGCTCCAGCCTGCTATTTGTTCATCTTGTCTGAAGGTGCCAGCACAATCAACTTCAGCCACAGTT-ATAC-------
--------------------------------------------------------------------------------
-----------------CATTTACCAACTTGAAAAGATGGCTAGTTTTGAGTTTCGGGGGTCACTGGGTACTCCACAACT
AGGATCGTGAGCATGCGTGGCATGTTATATTTTGTATTGACATCATTTTTCTACCAGAGTCCTTCCATTGCACATTTGC-
-AGAGTC-CTCCCTGATGTCTAACTAATTTCTGCTGTCACGCCAGAATTTTATTTACTCTCTGTTGCATGTTTGAAATCA
CCATAGAAGGCATAGTTGCTAAAGGCGTAACATTTTCCTTATCTATTGTGATGCAGTAAATGAGAACATGAGCACGAGGG
CAATTCACAAGGCACTCCTCGAATCAGCTGCCCTTATTGCAGCCAGTGCTGTGCAGGTCTACTTGCTGCGACGCCTCTTC
GAGCGTAAGCTCGGTACATCTAGGGTCTAATTTCTACCTCTAGCTCTCCTCATACTTACCAACCCGACTGGACTTCATTA
CTACAGTGTGTGGTTTCAGGATGTTCTACACCCTGTTCAGATATTCATGAGTTTTTTTCTTTGAGAATTTTGTAATTTGG
ATGACACAGTATGGCGCAGCATTAGAGTGCCTTCTGTGTTCCTAGTTGCGCTCCTGAGTTTCAGTTCAGCTATGATATCC
ATCAACACTTGCATACTACTCTCTCCATTCCTAAATATAAGTC--TTTAG--AGATTCCAATAAGGGACTACATATGGAG
CAAAATGAGTGAATCTACACTTTAAAATATGTCTATATACATCCGTATGTAGTTTGTATTGAAATTTTGAAAAGGAC---
T---ATTTAGAAACAGAGGGAGTAGTATGTGCTAACCGCTTCGTGGCACAATTATGAAAATGTTTGAAACATGAAGGTCA
AACAACA-------------------------------------------------------------------------
AGGGCTCCTAATTTTATGTTTTGGGAAAGTTGAAGTGAGTTTTTTTTGTAAATATAAAATAAATAGGGGGATCCTTTTGT
TGTCAAGCCCTCTGAACAACA--AAAAATGGCTGGATTGAACTGAAAGGAGTGGACTGCCAGCCCAGACCTGCTAGTCTG
CTTCAGTACCCTTTATATGG-CAATCACAGGCCATGTTTCCAATGATAGATAGATAATTTAGTTTGCATTATCCAATCAT
CTTGTGATTCAGCTATGATTCCTTGATCTGATTGCCTG---TTACAAGATATCTCGATCGTCAGACGATGCCAAATCCAA
GGAGATGAAACAGCCCCAACCCATGTGCAGCCCAGCCTCAGTCAACCCACAGTTCCTCTTCTCTCTAGATTTGATTGGTT
CCACAGAGTCTCACACTTACGAGCATTTGAAAAGTCCCAACATGATTGGCAACTTGGCATGGCCGTCTCTCACT------
-----
>chr5D_15
--------------TAAACCCAACGAAAAGGCAGAGAAAACCTCTCGTGCGCTGCGCTCTTCTCCCCACCGAAACTCCTC
CTCCGCACCCCCGCCGGAGATTCGCCGGAACCGCCTTCGCCCAAGGTCAGCTCGATCCACCCAATCTCCCACCACGCGCG
TTTCGATTTCGCCCGCCGCCCCCCCCGGATCGATCCCCTCCCCTTCCTCTGAATCGATCGACCAGCCGCGCGGGACGGCT
CGCGTTCGCAATTCGATTTATTTTTGGGGAAGGAAATCGCCATCTCTCCCGCGGCTAGATTCGTGAAATTTCTCGGGGTA
GTCCGAGTCCCGTCCCGTCGCTGTTTGGATGCCGTGGTGCGCGCGCCTTGTGTGCGCTACTGGTTTCTCATTTCGCTGCC
TGAAATTCACGGAGAGGGAGGACGCCCTCTGATTTTGGTTCCTGGGAGCGCCGTCTAGATCTAGCGGGAATGCTTGGCTC
CTTGCGCTTGTGCCCTAGGTTTGGAGATGGGGAGGTAGTTTAACTCTTACCCTAGGTTACGCTTATCTGTCTGTATCTTG
GTTCAGTCGGTA-------------------ATTTTTCCAGTGC---GGAAATTTGTACCTGTGCATCTATCCTGTGAAT
GAAGCAATCGCCTGAAATCTGATGCGTTAATTCACTTGTTATC-TTCAGAGTCTGCGATTTTTTCACTGTAAACTCTCAT
ACCGAGGCCACC-CCTTGATGCCACAGTAGCACTAG------TGTAGTATTGCCATGTAGTCATGTATTCCTGTGGATTC
GAAGTCATGGATCCGTGTTGATTTGAGAAGGAGATGCTCTATGTTGGTCTTCAGTTCGGTGCCCTTGGTCGTCAGAGTTT
TGAGTTGAGAAGCGCTAATCCAACTGTCATGAATGGGGTCATGTAGTTGGACTGCAGTCTTTTGATAATGCCCCCAATCG
TAGTTGGACAGGGTCTAACTTGTTTAATTTTGTCTCTGCCAGTCAGATGATGGACGTGAGGGGCTTGAGATTGGGTTATT
TCTTGGTCCTATGCCTTGTGCCTTTCTTGCGCCATGCTGTGGCTATTCGCTTTGTGATGGACAGGGGAGAGTGCTTCTCT
CACAATGTTGATTATGAAGGGGATACAGTTCATGTATCATTTGTTGTGATCAAGGCAGACACTCCTTGGCACTACAGCGA
GGATGGTGTCGATCTCGTGGTATGGTCTTTTTCTCCACATGTGCATTACTCCATTAACTTTAGCATGACGAAATATGTGC
TTGTTGTTGGCAGGGAACGATAATTGGCTCACTGTCATTATTTTTGTAGTTTATCTGTATACTTCTTTCACTAAGATGAT
TTTCTGCAAGTCACATCCACTGAAACTGATTCAGTCATGATTTATTGCAGGTGAAAGACCCTAATGGCAATCAAGTCCAT
GATTCTCGTGCCAAGGTTAGTGATAAGTTCGAATTCATAGTTCAGAAGAGAGGTGTCCACCGTTTCTGCTTCACCAATAA
GTCCCCGTATCATGAAACTGTGGACTTTGATGTGCATGTTGGTCATTTTTCATATTTTGACCAGCATGCCAAAGATGGTA
AA--------CTCTCTCTCTCTCTCTCTCTCATGCACATCAAATGGTGTAGAGACCAGTGTGTGCACCACTAATTCCTTT
GTTCTGAAAAAA-TGGTGCAGAGCATTTTGGTCCTTTGTTTGAACAAATAAGAAAGTTGGATGAAGATCTGTACAACGTT
CTGTTTGAACAGCACTGGCTAACTGCCCAAACAGACCGCCAAGCAATATGTAAGTTTCTCCTCTCACATTCTCTCTTATA
ACT-TGTAAGTACTAGTGCATTGTAATATTTTAAGGCTCTCTTGTCTTCCTCTTTCTCTTTTATCCGAATAGCACCTCTG
AG-------CTGTAACCTGTAACCATTGGCCAATGTGCGATTCTCCTGATGCTTAATGAAAAATAATTTTTAACACTGTT
AGGTGCTCCAGCCTGCTATTTGTTCATCTTGTCTGAAGGTGTCAGCACAATCAACTTCAGCTACAGTT-ATACTCCCTCC
GTTCCAAATTACTCGTCGCTGAAATGAATGTATCTAGAACTAAAATACATCTAGATACATCCATACGTGCGACAAGTAAT
TCGGAACGGAGTAGTACCATTTACCAACTTGAAAAGATGGCTAGTTTTGAGTTTCGGGGGCCTCTGGGTACTCCACAACT
AGGATCGTGAGCATG---------TTATATTTTGTATCGACATCATTTTTCTAGCAGATTCCTTCTATTGCACATTTGCA
CAGTCTTTCTCCCCGATGTCTAACTAATTTCTGCTGTCACGTCAGAATTTTATTTA--CTCTGTTGCATGTTTGAAATCA
CCATAAAAAGCATAGTTGCTAAAGGCGTAATATTTTCCTTATCTATTGCGATGCAGTAAACGAGAACATGAGCACGAGGG
CTATTCACAAGGCACTCCTCGAATCAGCTGCCCTTATCGCAGCCAGTGCTGTGCAGGTCTACTTGCTGCGACGCCTCTTC
GAGCGTAAGCTGGGTACATCTAGGGTCTAATTTCTACCTCTAGCTCTCCTCATACTCACCAACCCGACTGGACTTCATTA
CTACAGTGTGTGGTTTCAGGATGTTCTACACCCTGTTCAGATATTCATGAGTTTTTTTCTTTGAGGATTTTGTAATTTGG
GTGACACAGTATGGTGCAGCATTAGAGTGCCTTCTGTGATCCTAGTTGACCTCCTGAGTTTCAGTTCAGCTATGATATCC
ATCAACACTTGCATACTACTCCTTCCGTTCCTAAATATAGGTC--TTTTTATAGATTCCAAT-AGGGACTACATACGGAG
CAAAATGGGTGAATCTACACTTTAAAATATGTCTATATACGTCCGTATGTAGTTTGTATTGAAATTTCGAAAGAGACTTG
T---ATTTAGAAACCGAGGGAGTAGTATGTGCTAACTGCTTCGTGGCACAATTATGAAAATGTTTGAAACATGAAGGTCA
AACAACA-------------------------------------------------------------------------
AGGGCTCCTAAGTTTATGTTTTGGGAAAGTTGAAGTGAGTTTTTTTTTGT------AAATAAATAGGGGGATCCTTTTGT
TGTCAAGCCCTCTGAACAAAATGAAAAATGGCTGGATTGAACTGAAAGGAGTGGACTGCCAGCCCAGACCTGCTAGTCTG
CTTCAGTACCATTTATATGACCAATCACAGGCCATGTTTCCAATGATAAATAGATAATTTAGTTTGAATTATCCAATCAT
CTTGTGATTCTGCTATGGTTCCTTGATCTGATTGCCTGGACTTACAAGAGATCTCGATCGTCAGACGGTGCCAAATCCAA
GGAGAAGAAACAGTTGGAACCCATGTGCAGCCCAGCCTCACTTAACCCAAAATTCCTCTTCTCTCTAGATTTGATTGGTT
CCAGAGCGTCTCAAACTGATGAGCATTTGAAAAGTCCCAACATGATTGGCAACTTGGCATGGCCGTCTCTCTATCACTAG
CATCG
>SNPs
SSSSSSSSSSSSSS------------------------------------------------------------------
---------------------S-S----------S---------------------------------S--S--------
-------------S-----------------------------------------------S-----S------------
-------------------------S------------------------SSSS--------------------------
-------------------------S-----------------------S---S-S------------------------
------------------S-------------------------------------------------------------
-------------------------------S------------------------------S---------------SS
SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSS------------SSSS------------S--------------------
-----------------------------------------SSS--------S----S--------SS------------
---S--SSS---S----S---S----S----SSSS-SSSSSS----S-----S--------------S-----------S
----------------------S---------------------------S------------------S----------
-------------------------------------S---------------------------------S--------
------------------------S-------------------------------------------------------
----------S---------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------------S-------------S-------------------------------------------
-----------------------S------------------------------------S-------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SSSSSSS----------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------S------------------------------------------------------------------S---
--SSSSSSS-----------------------------------------------------------------------
-------------------------------------------------------------S------S-----------
--------------------------------------------------------------------------------
-----------------------------------------S--------SS----------------------------
----------------------------------------------------S-------S-------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-------------------------S-----------------------------------S------------------
--------------------------------------------------------------------------------
S------------------------S---------------S-SS-----------------------------------
--------------S--------------------------------------------------S--------------
-SSS----------S--------------S----------------------------------------------S---
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------------S-------S---------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------S-----------------------------
------------S------------------------------------------S------------------------
----------------------------------------------S-------------------------------S-
-------S-----S--------SS------------------------------------------------------SS
SSSS-
>forward_589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGCGCCAGTTTTGTTCATCG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_2202
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CAGTTTTGAACTTCGGGGGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_1929
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAGCACCGCTG
AGCTGTAAC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_3077
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------GCTCTGTTCAGTGCTGGTCT------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----
