>input_sequence_50456
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---------------------------------------ATGGCGAACTCCCAGCCCTCCTCCTGGCTCGCCGCCGTGGC
GGCCAATGCCGCCGCCAGACCAACCATCCTCCACCGCGCCCACGCCGCCCTCATCACCTCTGGGCACCTCTCCTCCTGCA
CCTTCGTTAACTCCCTCCTCCGCGCCGCTCGCATCCCCGCTGCCTGCGCCCTTCTCCTCCGCTTCCTCCTCCTCCACCGC
CTCCCGCCCGACCACCTCTCCCTCTCCTTCTCCCTCCACTCCTGCACCCGCTCCCCCTGCCTCCCCGTCGCGAGCCTCCT
CCACTCGTTCGCCGTCAGGCTTGGCCATGCCCGCGACGTCTACGTCCTCAACGCTGCCGTCTCTGCCTACTTCAGGGCCA
CTGACGTCGCCTCCGCCGAGCGGCTCTTCTCCTACACAAAGGATGTCGCCGACGTTGTCACCTGGACGACCATGGTCACC
GGGCATGCCAACGCCGGCGACGTTGCGCGTGCGAGGTGGTTCTTCGACGCCATGCCTGAGAGGAACGTGGTTTCCTGGAA
TACGATGCTGGGCGCGTACGCGTCCGCCGGGATGCTGTCCAAGGCGCGGAAGGTGTTCGATATAATGCCCAGCCGGAATG
CTGCCTCGTGGAGCTCGATGGTTACCGGGCTCGTGCAGTCCAATCAGTGTGAGGAGGCGTTGAGGGTGTTCAGTGAAATG
ATCGGAACAGGTGTCGTGCCGAATGAGGCTGCACTGGTGAGCGCTGTCTCAGCGTGCTCGCTGCTGCGGTCAATAGAGCA
CGGCATGTGGGTACATGCGTATGCCAAGCGGGAGCTGAATGGGATGAGCGTCATCCTCGCCACAGCGATTGTTGACATGT
ATGGTAAATGTGGGGGTATCCATAATGCCGTCAGGGTGTTTGCTGCAATGCCAGTGAAAAACATCTACTCATGGAACTCG
ATGATTACTGGGCTCGCCATGAACGGCAGGGAAATGCAGGCCTTGTCACTCTTCTGGAAGATGCAGATGGCTGGTGTTCG
ACCTAATGATATAACCTTCATCGGGTTGCTGGGCGCTTGTAGCCACTCAGGTCTTGTCGATGAGGGCCGCTGGTTGTTCA
ACAAGATGGTTAATGGCTTTGGAATCCAGCCACTCCAAGAGCACTACGGCCTAATGGTTGATTTACTCGGTCGGGCGGGT
CATGTTAGGGAGGCAGTGGATTTTGTCAACAGCATGCCGGTGGAGCCGCATCCGGGCTTGTGGGGTGCGCTTGCTGGCGC
CTGCAAGATCCATGGTGAGGTGGAGCTTGGTGAGGAGATTGCCAAGAAGCTCATTGAACTGGAGCCCCGTCATGGTAGCC
GGTACATCCTCCTGTCAAACATATATGGTGCATCAAACAGATGGGATGACATGGCCACAGTGCGCAGGCTCCTTAAGGAG
CGCAAGATCCCCAAGGGCACTGGCAATGCCATGGTTGGTAATGATGGTCAGTCTATGAAATCCATGCTAGGTTAG-----
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>chr6D_1_TraesCS6D01G211800
GAGTGTGAGTTTTTGTAGAGTGAAT--CTGGAAAAACATCTAGGACAGGAGTAGTAGATTGTAGATAGAGCTCAAGGAAA
AGCCTTCATTGCAGAATGTTGACCAAAGCGTTTCCTCTTGCATTTGTTCTA-TGCATTTCTCAAGATATTTTCTTCTCAT
CCACCATAAGCA----------------------------------CAAATTGTGATAACTCAGCCACATGTCCTATCCG
GACTGTATCCATGCCATTTATTTTCTTC---TTTATTTAGGAATGTGTCATTTTGA--TACTTGTTGACACCCAAACTAT
TGCATCTTTGCAGGCAGAAGATGATGACAGTGCCGATAGCTGTACAAACACCTCAAGAGCATCCAAGAGACCTGCCGCCT
GACAAGGGTGATTGTGAAGACTGTAG--GGCTGAACTATGGAGTGGACAAGGGCAACACTCA--TCTTCCTGCATCCCGT
TCTCACCAGAAGAAATTTTTGTACATTTTGTTATCTGGTTATTTTTGTCAAATCTGT----TATATGTAACCTATAATTA
GTTGCAACACTTACACGAAACGGTTTTGTTCTTGGGGGAAAGAGTCGT----TTACTTGCTTATTCTTTTCTGCGATG--
GGAGCAAAAGTTTCAGATTCTTCCTCGTTTTCTGCTTATTC----------TGTGGTGATTTGGATCGGATGATCGCATA
T------------------------------------TTTTGTGAAAACCTTGTCAGGAGCGTAGGTTCCTGCAATTGG-
--ATTGAGAAGAGAA--TTGGTCCAGTTGGGGAGGAAAGTCGGGCCCCAAAGCCTTACAAAA-CCCGGTACCGATGCAGA
TTTCGCAGGCTGGCTCAGTTGGTTTTGCAGAAGCTGTGCCAAAAATGTATGAACTCGAAACGGCTC--------------
---AGGCCGTCGTGGCCGGAGGAAGATTTGCGTAGCCCGTTGTTGTAGCAGCTGCATGTGGAAGATCAC-----------
----------------------GACCGCCCGCCTTCCATCGGACGATTCATAGCACTCGAGGAGCAGATCT-CATTGCCC
CATTCTCGCCGGTCCTACCTGTCAGTCCAGTGCTCTCCCATGGCGAACTCCCAGCCCTCCTCCTGGCTCGCCGCCGTGGC
GGCCAATGCCGCCGCCAGACCAACCATCCTCCACCGCGCCCACGCCGCCCTCATCACCTCTGGGCACCTCTCCTCCTGCA
CCTTCGTTAACTCCCTCCTCCGCGCCGCTCGCATCCCCGCTGCCTGCGCCCTTCTCCTCCGCTTCCTCCTCCTCCACCGC
CTCCCGCCCGACCACCTCTCCCTCTCCTTCTCCCTCCACTCCTGCACCCGCTCCCCCTGCCTCCCCGTCGCGAGCCTCCT
CCACTCGTTCGCCGTCAGGCTTGGCCATGCCCGCGACGTCTACGTCCTCAACGCTGCCGTCTCTGCCTACTTCAGGGCCA
CTGACGTCGCCTCCGCCGAGCGGCTCTTCTCCTACACAAAGGATGTCGCCGACGTTGTCACCTGGACGACCATGGTCACC
GGGCATGCCAACGCCGGCGACGTTGCGCGTGCGAGGTGGTTCTTCGACGCCATGCCTGAGAGGAACGTGGTTTCCTGGAA
TACGATGCTGGGCGCGTACGCGTCCGCCGGGATGCTGTCCAAGGCGCGGAAGGTGTTCGATATAATGCCCAGCCGGAATG
CTGCCTCGTGGAGCTCGATGGTTACCGGGCTCGTGCAGTCCAATCAGTGTGAGGAGGCGTTGAGGGTGTTCAGTGAAATG
ATCGGAACAGGTGTCGTGCCGAATGAGGCTGCACTGGTGAGCGCTGTCTCAGCGTGCTCGCTGCTGCGGTCAATAGAGCA
CGGCATGTGGGTACATGCGTATGCCAAGCGGGAGCTGAATGGGATGAGCGTCATCCTCGCCACAGCGATTGTTGACATGT
ATGGTAAATGTGGGGGTATCCATAATGCCGTCAGGGTGTTTGCTGCAATGCCAGTGAAAAACATCTACTCATGGAACTCG
ATGATTACTGGGCTCGCCATGAACGGCAGGGAAATGCAGGCCTTGTCACTCTTCTGGAAGATGCAGATGGCTGGTGTTCG
ACCTAATGATATAACCTTCATCGGGTTGCTGGGCGCTTGTAGCCACTCAGGTCTTGTCGATGAGGGCCGCTGGTTGTTCA
ACAAGATGGTTAATGGCTTTGGAATCCAGCCACTCCAAGAGCACTACGGCCTAATGGTTGATTTACTCGGTCGGGCGGGT
CATGTTAGGGAGGCAGTGGATTTTGTCAACAGCATGCCGGTGGAGCCGCATCCGGGCTTGTGGGGTGCGCTTGCTGGCGC
CTGCAAGATCCATGGTGAGGTGGAGCTTGGTGAGGAGATTGCCAAGAAGCTCATTGAACTGGAGCCCCGTCATGGTAGCC
GGTACATCCTCCTGTCAAACATATATGGTGCATCAAACAGATGGGATGACATGGCCACAGTGCGCAGGCTCCTTAAGGAG
CGCAAGATCCCCAAGGGCACTGGCAATGCCATGGTTGGTAATGATGGTCAGTCTATGAAATCCATGCTAGGTTAGTATTC
CTGTAGACAGTGACATGTCAGGAGCTTACTGACTGGGTGGCATGAGGTTGATTACCCTCCATCCACCTTGGAGACATCAT
TGTGCTGAAACAAACCTCCATAGGGGAGAAATGTTTGATTTATGTGTTAGTATATGCCTGATTTTTTATGCTGCACACTG
AAATCAACATGGGGCAGAGCTGCAAAATCCTGTCAAGAAGCCAATAGTTCTTTGTATTTAAATACTGTCCTGAAGATGCA
GAAGCTCAGAAAATATGCACCT---AAGGACTACGGCATGCATATTTGTAATAGAATTATGATGGGAAGAGGCGGGAGCA
GAAAAGCCATCATGAGGCTCAGGTTCATTGAATAATTTCTTGCAACCTTTCCGTATGCT--TTTTTTTACTCTATGCTTG
AATCAGATGTATGCAAACCACTCGAGTATTGTCGTGGATATATGATGTTTATGTTCTATCCTGCCATTACATGTGTTTAT
CAAAGTTTCTA---------------------------------------------------------------------
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-----------------------ACATTTTAACAGAATTGAAGTTCAGTTCAGCTTAGGGCCTCGTTGATTCATTAGGAT
TTTCATAGGGAATTTCCTAAGTTGGCTGTTTGATTTAGAGGATTGAATCCTATGGGTAAATTTTCCGAAGTATTCCTCAG
GAAACTTTCCATTTACTCAAACCTCTTGGAAAGATTCATTTGTTTTTTGA----GTGCAACGAAACAAACGTGTCCATGA
CATTGCAGTCTTGCAACTTCCCTATTTATGTGTTTTTGCGATCATGCGAATCAAAGAGAGGCTGACATGAGAGAAGCTAT
GCTTACTTTGGTTTTCCTTTTTATATACTTGAGTATCAAGTTAACTGTTTGTTTGCCTCTGTTTCGGGAGGGAGATATTT
C-CCCCCCACTAAGGTCCCAAGTAAAACATTGGGGAAGTTGAATCCCTGAGACAGACAAGGTTCCAACATAATGGGTGCA
TCATCCATGGGATGGACGAGGCTCTGTCCTCTAATGGCTGGAGTTTTATGTGGATTA
>chr6B_4
TGTGAG----TTTTGTAGAGTAATATACTGGAACAGCATCTTGGACAGGAGTA-------GTAGATAGAGCTCAAGGAAA
AGCCTTCATTGCAGAATGTTGACCAAAGCGTTTCCTCTTGCATTTCTTCTTGTGCATTTCTCAAGATATTTTCTTCTCAT
CCACTATAAGCACCGAGTTTGATT----------------------------------------------------TCCA
GACGGCATGCATGGCATTTGTTTTCTTTTCTTTTTTTTAGGAATGTGCTATTTGATACTACTTGTTGACACACAAACTAT
TGCATCTTTGCAGGCAGAAGATGATGACAGTGCCGATAGTGGTACAAACACCTCAAGAGCATCCAAGAGACCTGCCGCCT
GACGAGGGTGGTTGTGGATGACGTACACGGCTGAACAATGGAGCGGACAAGCGCAACACTCGGATCTTCCTGCACCCCAC
TCTCATCCTAAGAAAAATTTGTACATTTTGCTGTCTGGTTATTTTTGTCAAATCTGTTATATATATGTAACCTATAATTA
GTTGCAACACTTGGACGAAACGGTTTTGTTCTCGGGGGGAAGAGTCGT----TTA----CTTATTCTTTTCTGCGATATA
GGAGCAAAAATTTCAGATTCTCCGTCGTTTTCTGCTTATATGTTGTGGACTTGTGGTGATTTGGATCGGATGATCGCATA
ATTTTTTATTTTTATTTTTTTGGGACAGATCGCATAATTTTGTGAAAACCTCGTCAGGAGGGCAGCTTCCTGCAGTTCCA
CCATTAAGAAGAGAAAATTGGTCCAGTTAGTGAGGAAAATCGGGCCCAAAAGCCTTACAAAGCCCCGGTACTGACGCAGA
TTTCGCAGGGTGGCCCAGTTGGTTTTGCAGTAGCTGTGCCAAAAATGTATGAACTCGAAACGGCTGCAGCATCGCCGCAT
CGGAGGCCGTCCTGGCCGGAGGAAGATT-GCGTAGCCCGTCGTTGTAGCACCAGCATGTAAAAGATCACGACCGTCCCCT
CAAAAAAATTGTAAAAGATCACGACCGCCCGCCTTCCATCGGACGATGCAGACCACTCGAGGGGCAGATCAACATTGCCC
CATTCTCGCCGGTCCTACCTGTCAGT-----GCTCTCCCATGGCGAACTCCCAGCCCTCCTCCTGGCTCGCCGCCGTGGC
GACCAATGCCGCCGCCAGGCCAGCCATCCTCCACCGCGCCCACGCCGCCCTCATCACCTCTGGCCACCTATCCTCCTGCA
CCTCCGTTAACTCCCTCCTCCGCGCCGCTCGCATCCCCGCTGCCTGCGCCCTTCTCCTCCGCTTCCTCCTCCTCCACCGC
CTCCCGCCCGACCACCTCTCCCTCTCCTTCTCCCTCCACTCCTGCACCCGCTCCCCCAGCCTCCCCGTCGCAAGCCTCCT
CCACTCGTTCGCCTTCAGGCTTGGCCATGCCCGCGACGTCTACGTCCTCAATGCTGCCGTCTCCGCCTACTTCAGGGCCA
CCGACGTCGCCTCCGCCGAGCGGCTCTTCTCCTACACAAAGGATGTCGCCGACGTTGTCACCTGGACCACCATGGTCACC
GGGCATGCCAACGCCGGCGACGTTGCGCGTGCGAGGTGGTTCTTCGACGCCATGCCTGAGAGGAACGTGGTTTCCTGGAA
CGCGATGCTGGGCGCCTACGCATCCGCCGGGATGCTGTCCAAGGCGCGGAAGGTGTTCGATACAATGCCCAGCCGGAATG
CCGCCTCGTGGAGCTCGATGGTTACTGGGCTCGTGCAGTCCAATCAGTGTGAGGAGGCGTTGAGGGTGTTCAGTGAAATG
GTCGGGACGGGTGTCGTGCCGAATGAGGCTGCACTGGTGAGCGCTGTCTCAGCGTGCTCTCTGCTGCGGTCGATAGAGCA
CGGCATGTGGGTACATGCGTATGCCAAGCGGGAGCTGAATGGGATGAGCGTCATCCTCGCGACAGCGATTGTTGACATGT
ATGGTAAATGTGGGGGTATCCATAATGCCGTCAGGGTGTTTGCTGCAATGCCTGTGAAAAACATCTACTCGTGGAACTCG
ATGATTACTGGACTCGCCATGAACGGCAGGGAAATGCAGGCCTTGTCACTCTTCTGGAAGATGCAGATGGCTGGTGTTCG
ACCAAATGATATAACCTTCATCGGGTTGCTGGGTGCTTGTAGCCACTCAGGTCTCGTTGATGAGGGCCGCTGGTTGTTCA
ACAAGATGGTTAATGGCTTTGGAATCCAGCCACTCCAAGAGCACTACGGCCTAATGGTTGATTTACTCGGTCGGGCGGGT
CATGTTAGGGAGGCAGTGGATTTTGTCAACAGCATGCCGGTGGAGCCGCATCCGGGCTTGTGGGGTGCGCTTGCTGGCGC
CTGCAAGATCCATGGTGAGGTGGAGCTTGGTGAGGAGATTGCCAAGAAGCTCATTGAACTGGAGCCCCGTCATGGTAGCC
GGTACATCCTCCTGTCAAACATATATGGTGCATCAAACAGATGGGATGACATGGCCACTGTGCGCAGGCTCCTTAAGGAG
CGCAAGGTCCCCAAGGGCACTGGCAATGCCATGGTTGGTAATGATGGTCAGTCTATGAAATCCATGCTAGGTTAGTATTC
CTGTAGACAGTGACATGTCAGGAGCTTACTGACTGGGTGGCATGAGGTTGATTACCCTCCATCCACCTTGGAGACATCAT
TGTGCTGAAACAAACCTCCGTAGGGGAGAAATGTTTGATTTATGTGTTAGTATATGCCTGATTTCTTATGCTGCGCACTG
AAATCAACATGGCGCAGAGCTGCAAAATCCTGTCAAGAAGCCAAGAGTTCTTTGTATTTAAATACTGTCCTGAAGATGCA
GAAGCTCAGAAAATATGCACCT---AA---CTACGGCATGCATATTTGTAATTAAATTCCGATGGGAAGAGGCGGGAGCA
GAAAAGCCATCATGAGGCTCAGGTTCATTTAATAATTTCTTGCAACCTGTCCGTATGCTTCTTTTTTTACTGTATGCTTG
AATCAGATGTATGCAAACCACTCGAGTATTGTCTTGGATATATGATGTTTATGTTCTATCCTGCCATTACATGTGTTTAT
CAAAGTTTCTGTGTTACAGTATGTAATGGGCTTAATGGGCCCATTAGTCTTAGGGTTAATTAGAGATAAGGGTCGTTTGC
TTAGGGGTCAAGTAAGCCTTGCTTGAGAGTCAAGTAAACCTCTCTATATAAAGAGAGAAGACGTATCAATCGAATCAAGC
AAGAATTAAGAAGGAAATCCCTTCCCTCTTGCCCGGCCGTGGGCAAAAAGGCCCCCGGCCGGCCTTCTCGCGCCCTCCAT
CTAGCAGCGCCATAACAATTTGGTATCAGCTAGCTTCGGTTCGATCATGTCTTCACCGCCGCCAAGCCCGTCTCTTCCGC
TGCCGGTTACCTTGTCGCCTCCCGCGACCACCATGACCGTCACCCCGCTCCTGCCCGCGCCGGGATCCTCTGTCGCGCCC
GCCCCCACCGTCCTCACCTGGGAGGAGGTGTCCGGGGTGCTGCGGGACCTAACCCAGGCGGTCCAGGAGATCCACCTGTT
CTTGGCCGGGTCTTACGGGCCGCACTCGGTTGCACCGCCCATCGCCGCCCCTGCGCCGCCGTGGCTGTCGTGGCAGCCGC
CGCACCAGGCGGCCTTCGCCGCGCTCGCCGGGCCGCTGCAGCTCGCTGCAGCTGCCATCCATCGCCACCACCGCCCAGCC
CTGGCTGCAGTGGCAGCCGCCGCTCCTGGAGGCCTCCGCCGCGCCCGGCGCGACAGCGCAGCAACCACCGCCGGTCAGCT
CCGCCGCCCAGTATGGGATGCCCTACGACAGGAGTGCGACGACCTTGTTCCCATCAGCGCCGCCGCCATCCCAGGGCGTC
CACATCCAGTAGATCAAGTCCCTGCCGTCGCCGTCACCGCTTCCGTCTTGGATCGCTACCCGCCACGTGTCGGCGGCGGT
GATGCTGCAGGCTGCTGCACGCGGCCTCCTAGCGCGTCGGCGTGTGCGGGAGATGCGTGGTCTGCAGCTGCCGCTCCTCC
AAGTTGCCCTTCGCTGCGCAAAGGACCTCGATCTCATCCGCTGCGTCGGGGATCTTGGGCATGTGGTTTCCCCCACGGGC
GGCCGGCATGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCACCCCTCCTCGTCATTCTCCATCGCAAGCCCT
CCACTCTTCCCTGTGCGGTGCAGACCAACAGCCATACACATGCACTCCTTTTGTCCAGGTGGTGTTCATGGGATCCAGGT
GGCTGTTCACGTGCACGTCCAAAATAAAGCGTCATAGTCTATTTCAGGTTGAAAATAATAAAACAAGCCAAGATGTAAAA
GGCTTGTTTTTAGGTGTTAGGTTTGTGTTGCGTCGAGTCATGGTTATAAGTTGGTTAGGCTGCAGCTCGAGGACAAGCTG
CATGTCCAGGTGGGGTGTAGTGTTACGGTACGTAATGGGCTTAATGGGCCCATTAGTCTTAGGGTTAATTGGAGAGTTTG
CTTAGGGGTCAAGTAAGCCTTGCTTGAGAGTCAAGTAAACCTCTCTATATAAAGAGAGGAGATGTATCAATCTAATCAAG
CAAGAATTAAGAAGGAAATCCCTTCCCTCTTGCCCGGCCGTGGGCAAAAAGGCCCCCGGCCGGCCTTCTCGCGCCCTCCA
TCTAGCAGCGCCATAACATTCTGACATTTTAACAGAATTGAAGTTCAGTTCAGCTTGGGGCCTTGTTGATTCATTAGGAT
TTTCATAGGGAATTTCCTAAGTTGGCTGTTTGATTCAAGGGATTGAATCCTATGGGTAAACTTTCCGAAGTATTCCTTAG
GAAAGTTTCCATTGACTCAAACTTCTTGGAAAGATTCATTTGTTTTTTGCTATGGTGCAACGGAACAAACGTGTCCATGA
CATTGCAATCTTGCAACTTCCCTATTTATGTGTTTTTGCGATCATGTGAATCAAAGAGAGGCTGTCATGATAGAAGCTAT
GCTTACCTTGGTTTTCC-TTTTATATACTTGAGTATCAAGTTAACTGTTTGTTTGCCTCTGTTCCGGGAGGGAGATATTT
TTCCCCCCACTAAGGTCCCAAGTAAAACATTGGGGAAGTTGAATCCCTGAGACAGACAAGGTTCCAACATAATGG-----
---------------------------------------------------------
>chr6A_59
------------------------------------------------------------GTAGATAGAGCTCAAGGAAA
AGCCTTCATTGCAGAATGTTGACCAAAGCGTTTCCTCTTGCATTTCTTCTTGTGCATTTCTCAAGATATTTTCTTCTCAA
CCACCATAAGCAGATTATGATAACTCTTTTTTTTTTTGCGAATTAGCAGAGTATGATAACTCGGCCGCACGTTCTATCCA
GACTACACGCATGGCATTTGTTTTCTTC----TTCTTTAGGAATGTGTCATTTTGA--TACTTGTTGACACCCAAACTAT
TGCATCTTTGCAGGCTGAAGATGATGACAGTGCCGATAGCTGTACAGACACCTCAAGAGCATCCAAGAGACCTGCCGCCT
GACAAGGGTGATTGTGAAGACTGTAG--GGCTGAACTATGGAGTGGACAAGGGCAACACTCAGATCTTCCTGCATCCCAT
TCTCATCAGAAAAAAAA-TTGTACATTTTGTTATCTGGTTATTTTTGTCAAATCTGT----TATATGTAACCTATAATTA
GTTGCAACACTTGCACAAAACGGTTTCGTTCTTGGGGGAAAGAGTTGTTTACTTA----CTTATTCTTTTCTGCGATG--
GGAGCAAAAGTTTCAGATTCTTCCTCGTTTTCTGCTTATT----------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TACAAAG-CCCGGTACCGGTGCAGA
ATTCGCAGGCTGGCTCAGTTGGTTTTGTAGAAGCTGTGCCAAAAATGTATGAACTCGAAACGGCTC--------------
---AGGCCGTCGTGGCCGGAGGAAGATTTGCGTAGCCCGTTGATGTAGCAGCTGCATGTGGAAGATCAC-----------
----------------------GACCGCCCGCCTTCCATCGGACGATTCATAGCACTCGAGGAGCAGATCT-CATTGCCC
CATTCTCGCCGGTCCTACCTGTCAGTGCGGTGCTCTCCCATGGCGAACTCCCAGCCCTCCTCCTGGCTCGCCGCCGTGGC
GGCCAATGCCGCCGCCAGACCAGCCATCCTCCACCGCGCCCACGCCGCCCTCATCACCTCTGGCCACCTCTCCTCCTGCA
CCTCCGTTAACTCCCTCCTCCGCGCCGCTCGCATCCCCGCTGCCTGCGCCCTTCTCCTCCGCTTCCTCCTCCTCCACCGC
CTCCCGCCCGACCACCTCTCCCTCTCCTTCTCCCTCCACTCCTGTACCCGCTCCCCCAGCCTCCCCGTCGCGAGCCTCCT
CCACTCGCTCGCCGTCAGGCTTGGCCATGCCCGCGACGTCTACGTCCTCAACGCTGCCGTCTCCGCCTACTTCAGGGCCA
CCGACGTCGCCTCCGCCGAGCGGCTCTTCTCCTACACAAAGGATGTCGCCGACGTTGTCACCTGGACCACCATGGTCACC
GGGCATGCCAACGCCGGCGACGTTGCGCGTGCGAGTTGGTTCTTCGATGCCATGCCTGAGAGGAACGTGGTTTCCTGGAA
CGCGATGCTGGGCGCGTACGCATCCGCCGGGATGCTGTCCAAGGCGCGGAAGGTGTTCGATACAATGCCCAGCCGGAATG
CCGCCTCGTGGAGCTCGATGGTCACTGGGCTCGTGCAGTCCAATCAGTGTGAGGAGGCGTTGAGGGTGTTCAGTGAAATG
GTCGGGACGGGTGTCGTGCCGAATGAGGCTGCACTGGTGAGCGCTGTCTCAGCGTGCTCGCTGCTGCGGTCGATAGAGCA
CGGCATGTGGGTACATGCGTATGCCAAGCGGGAGCTGAATGGGATGAGCGTCATCCTCGCGACAGCGATTGTTGACATGT
ATGGTAAATGTGGGGGTATCCATAATGCCGTCAGGGTGTTTGCTGCAATGCCAGTGAAAAACATCTACTCATGGAACTCG
ATGATTACTGGGCTCGCCATGAACGGCAGGGAAATGCAGGCCTTATCACTCTTCTGGAAGATGCAGATGGCTGGTGTTCG
ACCAAATGATATAACCTTCATCGGGTTGCTGGGTGCTTGTAGCCACTCAGGTCTTGTCGATGAGGGCCGCTGGTTGTTCA
ACAAGATGGTTAATGGCTTTGGAATCCAGCCACTCCAAGAGCACTACGGCCTAATGGTTGATTTACTCGGTCGGGCAGGT
CATGTTAGGAAGGCAGTGGATTTTGTCAACAGCATGCCGGTGGAGCCGCATCCGGGCTTGTGGGGTGCGCTTGCTGGCGC
CTGCAAGATCCATGGTGAGGTGGAGCTTGGTGAGGAGATTGCCAAGAAGCTCATTGAGCTGGAGCCCCGTCATGGCAGCC
GGTACATCCTCCTGTCAAACATATATGGTGCATCAAACAGATGGGATGACATGGCCACTGTGCGCAGGCTCCTTAAGGAG
CGCAAGGTCCCCAAGGGCACTGGGAATGCCATGGTTGGTAATGATGGTCAGTCTATGAAATCCATGCTAGGTTAGTATTC
CTGTAGACAGTGACCTGTCAGGAGCTTACAGACTGGGTGGCCTGAGGTTGATTACCCTCCATCCACCTTGGAGACATCAT
TGTGCTGAAACAAGCCTCCATAGGGGAGAAATGTTTGATTTATGTGTTAGTATATGCCTGATTTCTTATGCTGCACACTG
AAATCAACATGGTGCGGAGCTGCAAAATCCTGTCAAGAAGCCAAGAGTTCTTTGTATTTAAATACTGTCCTGAAGATGCA
GAAGCTCAGAAAATATGCACCTAAGAA---CTACGGCATGCATATTTGTAATTAAATTCTGATGGGAAGAGGCGGGAGCA
GAAAAGCAATCATGAGGCTCAGGTTCATTGAATAATTTCTTGCAACCTTTCCGTATGCTT-TTTTTTTACTGTATGCTTG
AATCAGATGTATGCAAACCACTCGAGTATTGTCTTGGATATATGATGTTTATGTTCTATCCTGCCATTACATGTGTTTAT
CAAAGTTTCTG---------------------------------------------------------------------
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-----------------------ACATTTTAACAGAACTGAAGTTCAATTCAGCTTGGGGCCTCGTTGATTCATTAGGAT
TTTCATAGGGAATTTCCTAAGTTGGCTGTTTGATTTAGAAGATTGAATCCTATGGGTAAATTTTCCGAAGTATTCCTTAG
GAAAGTTTCCATTGACTGAAACCTCTTGGAAAGATTCATTTGTTTTTTGCTATGGTGCAACGAAACAAACGTGTCCATGA
CAAC-----CTTGCAACTTACCTATTTTTGTGTTTTTGCGATCATGCGAATCAAAGACAGGCTGTCATGAGAGAAGCTAT
GCTTACCTTGGTTTTCC-TTTTTATATACTTG------------------------------------------------
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---------------------------------------------------------
>SNPs
SSSSSSSSSS-----------S-SS--------S-S-----S-----------SSSSSSS--------------------
---------------------------------------------S----S-----------------------------
------------------------------------------------S-S-S---------S---S--S--S------S
-----S--S----S-----S--------------S---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-----S---------SS---------------------------------------------------------------
------------S------------------------------------------SSSS---------------------
----------------------------------------S---------------------------------------
S--------------------------------------------------S--------S-S--S--------S--SS-
-----S----------------------S-S-------S--------S-------------S------------------
--------------------------------------------------------------------------------
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--------------------------S-S---------------------------------------------------
----------------------S----------------------------------------S----------------
---S----------------------------------------------------------------------------
---------------------------------------------------------S----------------------
---------------------------------------------------------------S----------------
-S-----------------------------------------------------------------S------------
--------------------------------------------------------------------------------
SS-------------------S----------------------------------------S-----------------
-S-----------------------S------------------------------------------------------
S----S--S--------------------------------------------------------------S--------
------------------------------------------------------------S-------------------
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---S-----------------------------S----------------------------------------------
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----------------------------------------------------------S---------------------
------S-------------------------------------------------------------------------
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----------------------------------------------------------------S---------------
------------S-------------------------------S-----------------------------------
---------------------------SSS----------------------SS----S---------------------
-----------------------------------------------------------------------S--------
---------------------------------S----------------------------------------------
----------S---------------------------------------------------------------------
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--------------------------------------------------------S-----------------------
-----------------------------------------------------------------------------S--
----S--------S-----------------------------------S------------------------------
-------S--------------------------------------------------------S---------------
------S----------S---------------------------------------------S----------------
S--------------------------------------------------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_486
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------------------------------------------------------------------TTCCTGCATCCCGT
TCTCAC--------------------------------------------------------------------------
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>reverse_1912
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-----------------------------------------------------------------------AATAGAGCA
CGGCATGTGGG---------------------------------------------------------------------
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>forward_839
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-------------------GGTCCAGTTGGGGAGGAAAG-----------------------------------------
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>reverse_2194
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---------------------------------CGCTTGTAGCCACTCAGGTC---------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_1786
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CGTGGAGCTCGATGGTTACC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_5526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CATGGGATGGACGAGGCTC---------------------------------
