>input_sequence_50452
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---------------------------ATGGATGAAAGGAGGACGATTTTGATGGACCGTTATGAAATCGGGAGGCACTT
AGGGCAAGGGAACTTTGCCAAGGTATATTATGGTCGGAATCTTGCAACTGGGCAGGCTGTTGCGATAAAGATGATCGATA
AGGAGAAGGTTTCAAGGATTGGCCTAATTGTGCAGATAAAGAGAGAGATCTCAATAATGGGATTGGTAAGGCATCCCAAC
GTGTTGAAGCTTTTCGAGGTAATGGCTAGCAAGAGCAAGATTTACTTTGTTTTGGAATATGCCAAAGGCGGCGAGCTTTT
CAACAAAATAACCA---AGGGAAAGTTAAGCGAGGATGCTGCGAGGAGATACTTCCATCAGCTCATCAGTGCCGTGGACT
ACTGCCATAGCCGAGGTGTTTATCATCGCGACTTGAAGCCGGAGAACCTACTCCTGGATGAGAATGAAAACCTTAAAGTC
TCTGATTTCGGGCTAAGTGCCCTGGCCGAGTCCACGAGACAAGATGGCCTCCTCCATACCACCTGTGGAACTCCAGCTTA
TGTTGCCCCTGAAGTGCTTAGCAGGAGAGGCTATGACGGTGCGAAGGCTGACATATGGTCCTGTGGAGTAATTCTATTTG
TGCTGGTGGCTGGTTTCCTTCCTTTCCACGACACAAATCTTATAGAGATGTATAGGAAGATCTCCAGGGCTGAATATAGA
TGCCCTCGCCCTTTTTCTGTTGAGCTAAAGGATCTACTGTATAAGATTCTTGATCCAGACCCAAGCACTAGGGCTTCTGT
TTCAAGGATAAAGAGAAGCGCTTGGTACAGGAAACCCGTTGATGTAAATGGACTGAAGATTAAACAAGAAACAAGAGATA
AGGTTCAGAAAGGTGAACCCACAACCTCTGAATCAACAGAAGGCATCAATGCAGAGGTTAACCAAGAAGCGTCATCAAGC
CTCACAAACTTGAATGCCTTTGACATAATTTCTCTCTCAACTGGGTTTGACCTATCCAATTTGTTCGAGGAGAAGTATGG
CCGGAGGGAGGTCAGATTTACCACTAGGCAGCCAGCAGAGGCTATATTTGCCAAGCTGAATGAAGTGGCCAAGAAATTGA
AGCTCAAAATCAAGAAGAAAGAAAACGGTGTCTTGAAATTGGCAGCACCAAAGGAAGGAATGAAGGGCATTCTTGAGTTT
GATGCAGAGGTTTTTGAGTTTGCGCCTTCTTTGCATTTAGTTGAATTAAAGAAAACCAATGGAGACACTATAGAGTATAA
ACAACTGATGAAAGATGAGATAAGGCCCGCACTTAAGGATGTGGTTTGGGCGTGGCAAGGCGAGTCGCACCCGCTCCCTG
AGAAATTTATCCGAGGAGAGCAGCAGCAGTCACCTTTGCCATCACTGCAGCAGCAATCACCTTTGTCATCGCAGCAGCAG
CAATCACCTTTGCCATTGCAGCAGCACCAG---CAATCACCTTTGCCATCGCAGCAGCCACAGGAGTAA-----------
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>chr6B_1_TraesCS6B01G163100
CGCCGACTATCTGGGACCCACATACAGCGCCTCTCCGCAGCGCCG--------CGCCCCGCCGGCCGTCCTCCACCAGGT
AAAGCTTCGGATGGTGCTCGCTAGCCCGCTCCGCCGG-----CCGGAGAGAT----CTGCCGGCGGCCTCCGCCGGTTGC
TTCCCGACCTAGTAGTGCC-----TTCTCGCCTTTTTGTCTTCTGCCGGC----CGTCCCTGGCCGGCTAGTTGATCGCC
CTGCGGAGAATAGGGGGATTTTGCTGATGTGGTACAGA------------GGGAGGGATTTCGGTGCTAGCCCCTGCCAT
---------------GTTCTTGTTCCGGTAACCGGAAGAAGAAGCTGATGGCTAGATTCTTTTTC---------------
---------------TATTTTATTTTTGGGTAAGCTATTTACTG------GAGCAGCCGGAAACCCTGTACCTCTGTAGC
ATCAGACCGATTACGGTCTGATCGACCTTCTCGAGGTGTCTAATTTCATACCACTAGCTGGCCGACCTGATTAGCTTCCC
AATTGTTGCCATTTCAGTGC--TTTGGATGGTTGGATA-AGTATTTTTTTCCCCAATAATGGCAGATAC-----------
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------------------------GCT-TCTTTAGGCAAATTAACCGTCGGTGCTATGTA--------------------
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--------------------------------TGTATGCTTGCGAAATCACGATGAGACAGGCAATA--GTC-CCTGAAA
GACTTATCCTGGATTTTCTTAATTTTGTCATGGACTTCTGAATA--------TGCTT---GTGCGTTTGTAACAACTTGA
CCCCCATTTGTGTT-----------------TGTTCTGATTTGGCTTGTTTATCTTTCGTTGCAGTTCTGGACTGGTGAC
ACCGTAACGGATTTATCTTGGAAAACTCGGAAGTGCTCCGGGGAGTTTGGCCCAGAATTTCCTTGTTGAGTTATCACAAG
AGTGGAGGCTCCATA--CTGGTTCGGTATTTGTGCGTT-ACACCT-GCGTCTGGAGCACAGGAGT------------GGG
ATATTGTCGTGGTAGGCCACATACCTATTAATAGACCACGGTAAACGTAGTGCATAGTGGACGCTGAAAGCACTATTCGG
CTTTCTAAATATAGATAGATTGCTATAATGGATGAAAGGAGGACGATTTTGATGGACCGTTATGAAATCGGGAGGCACTT
AGGGCAAGGGAACTTTGCCAAGGTATATTATGGTCGGAATCTTGCAACTGGGCAGGCTGTTGCGATAAAGATGATCGATA
AGGAGAAGGTTTCAAGGATTGGCCTAATTGTGCAGATAAAGAGAGAGATCTCAATAATGGGATTGGTAAGGCATCCCAAC
GTGTTGAAGCTTTTCGAGGTAATGGCTAGCAAGAGCAAGATTTACTTTGTTTTGGAATATGCCAAAGGCGGCGAGCTTTT
CAACAAAATAACCA---AGGGAAAGTTAAGCGAGGATGCTGCGAGGAGATACTTCCATCAGCTCATCAGTGCCGTGGACT
ACTGCCATAGCCGAGGTGTTTATCATCGCGACTTGAAGCCGGAGAACCTACTCCTGGATGAGAATGAAAACCTTAAAGTC
TCTGATTTCGGGCTAAGTGCCCTGGCCGAGTCCACGAGACAAGATGGCCTCCTCCATACCACCTGTGGAACTCCAGCTTA
TGTTGCCCCTGAAGTGCTTAGCAGGAGAGGCTATGACGGTGCGAAGGCTGACATATGGTCCTGTGGAGTAATTCTATTTG
TGCTGGTGGCTGGTTTCCTTCCTTTCCACGACACAAATCTTATAGAGATGTATAGGAAGATCTCCAGGGCTGAATATAGA
TGCCCTCGCCCTTTTTCTGTTGAGCTAAAGGATCTACTGTATAAGATTCTTGATCCAGACCCAAGCACTAGGGCTTCTGT
TTCAAGGATAAAGAGAAGCGCTTGGTACAGGAAACCCGTTGATGTAAATGGACTGAAGATTAAACAAGAAACAAGAGATA
AGGTTCAGAAAGGTGAACCCACAACCTCTGAATCAACAGAAGGCATCAATGCAGAGGTTAACCAAGAAGCGTCATCAAGC
CTCACAAACTTGAATGCCTTTGACATAATTTCTCTCTCAACTGGGTTTGACCTATCCAATTTGTTCGAGGAGAAGTATGG
CCGGAGGGAGGTCAGATTTACCACTAGGCAGCCAGCAGAGGCTATATTTGCCAAGCTGAATGAAGTGGCCAAGAAATTGA
AGCTCAAAATCAAGAAGAAAGAAAACGGTGTCTTGAAATTGGCAGCACCAAAGGAAGGAATGAAGGGCATTCTTGAGTTT
GATGCAGAGGTTTTTGAGTTTGCGCCTTCTTTGCATTTAGTTGAATTAAAGAAAACCAATGGAGACACTATAGAGTATAA
ACAACTGATGAAAGATGAGATAAGGCCCGCACTTAAGGATGTGGTTTGGGCGTGGCAAGGCGAGTCGCACCCGCTCCCTG
AGAAATTTATCCGAGGAGAGCAGCAGCAGTCACCTTTGCCATCACTGCAGCAGCAATCACCTTTGTCATCGCAGCAGCAG
CAATCACCTTTGCCATTGCAGCAGCACCAG---CAATCACCTTTGCCATCGCAGCAGCCACAGGAGTAATCGGCCCCATT
GCCAATCTGCTACCACAAAAGCACAGGACGAGATGCAGCCACTGCCGCCATGGCATCAGCAGTACCTACCAAAAACTATT
GTTGGCAGCACCTATAAACCATGCGGAGCATTGCAACGGCCAGGAT----------------------------------
-------------------------------ACATGTCACTGGTTCATCAGGTTTACCCTGTGTTAGTAG---ATCAGTT
GCCTATCATTTGGCATTTCCCCCTTCTTTTTAGCTCCTTTTGTATTGCTGTATTTTCTTCTGATGTTGTATATTCC---T
TTGCCAAAAGCACGCTCAATTTTGGGGACCTTTGTGCACTGCAGAAATTTGTGTTCACTGTGGCTGAAGATATTGAATAG
CGATAATAGAAAT---GGCATGCAACCATCACGATGTCTAGGAACACCCTGAACTAGGT-AATGGATGTAACCATGTGAT
ATGTGGAACCCTTGTGAGTGAACAAACATCTATTTGGAATCTGGACATTGACCAGAACTACTGTATATGGAGCCTAGAAA
ATCATTTTTCTGGTTAAAA-TTGGTTGGTCATCTTTCCAGTTTTTGTATTTTGAATGTTCATGATTATATGATTATATCC
TAGTGCTTTATGAAGGAGCTAAATATCGTGATTATATGATTATATCCTCTTTGAGAAAATGATTATGTCATATATGTGTG
TTAATAGCGAAACGACATCATCTTCTGGTGCATCAGCAGGAAGTGCCTTGCTATGTACTCCTTCCATTCCAATTTACTCG
TCGTGGTTTTTGAACTAAAACCACGACGAGTAAATCAGAACGGAGGGAGTAAGATGTTGGAACCTTGCATCGCTGCTCAC
CAGATATCTATGTTTGCCTTCCGCCTTGCAGTTTTATTTGTCACCT----------------------------------
-------------------------------------------GCTGTAACTTTTCCTGTTTGCATTTGCACGCGAGATA
TGTTGAGAGATGCCGTACAGCGCCCCTGGAATTTCGTCTATCCTTCTAC--TTTTCAAGATAATTTAAGTTTGTTGGTGG
AAAAGCAAAGAAATGGGTTAGTCA
>chr6D_1
CGCCGACTATCTGGGACCCACACACAGCGCCT----------CCG--------CGCACCGCCGGCCGTCCTCCACCAGGT
AAAGCTTCTGGTGGTGCTCGCTAGCTTGCTCCGCCGG-----CCGGAGAGAT----CTGCCGGCGGCCTCCGCCGGTTGC
TTCTCGACCTAGTAGTGC------TTATCGCCTTTTTATCTTATTATCCCGGCCGTTTCCTGGCCGGCTAGTCCATCGCC
CTGCGGAGGATAGGGGGATTTCGCTGATGCGGTTGGCGCTCGGCGCAGAGGGGAGGGAATTTGGTACCG-----------
-------------------------------------GAAGAAGCTCATGTATAGATTCTTTGTTTTGCTATTATTTTGG
ATAGATTCTTTGTTTTGCTATTATTTTGGGTAAACTCTTTATAGAAAATCGAGCGGCCGGAAATC--------CCCAAGC
ATCAGACCGATTGCAGTGCTCTCGACCTTCTCGGGGCGTCTAATTTCTCACAATAGTATTAGTTGGGATTAGCCTC----
--------CCATTTCAGTGCCCTTTGGCTGGTAGGATCGAGTTTTCTTCTTCCCAGTAATAGCAGATAT-----------
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------------------------GCTCTTTTTAGGCCAAGTAACGGTAGATGTTAGGCAG-------------------
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-------------------------------------GCTTGCAAAATCACGATGAGATAGGCAATACAGTTTCATGACA
GAATTATCCTGGGTTTTCTTTAAAAAAAATCCCAGA-CTTAATA--------TGCTTGTAGTACATTTGTAGCAACTTGA
ACCCCATTTGTTTTACATTTTGCTCCATATTTGTTCTGATTAGGTTTGTTTATTTTTCATTGCAGTTCTGGGCTGGTGAC
ACCGTAACGGATTTATCTTGGAAAAGTC-GAAGTGCTCCAGGGAGTTTGGCCCGGAATTTCCTTGTTGAGTTATCACAAG
AGTGGTGGCTCCATATACTGGTTCGGTATTTGTGTCTT-ACACCTGGCGTCTGGAGCACAGGAGT------------GGG
ATATTGTCGTGGTAGGCCACATACCTATTAATAGACCGCTGTAAACGTAGTGCATAGTGGACACTGAAAGCACTATTCGG
CTTTC----TGAATATAGATTGCTATAATGGAGGATAGGAGGACAATTCTGATGGACCGTTATGAAATCGGGAGGCAATT
AGGGCAAGGGAACTTTGCCAAGGTATATTATGGTCGGAATCTCGCAGGTGGACAGGCTGTTGCGATAAAGATGATCGATA
AGGAGAAGGTTTCGAGGGTTGGCCTAATTGTGCAGATAAAGAGGGAGATCTCGATAATGGGATTGGTAAGGCATCCCAAC
GTCTTGAAGCTTTTCGAGGTAATGGCTAGCAAGAGCAAGATTTACTTTGTTTTGGAGTATGCCAAAGGCGGCGAGCTTTT
CAACAAAATAACCA---AGGGAAAGTTAAGCGAGGATGCTGCAAGGAAATACTTCCATCAGCTCATCAGTGCCGTGGACT
ACTGCCATAGCCGAGGTGTTTATCATCGCGACTTGAAGCCGGAGAACCTACTCCTGGATGAGAATGAAAACCTTAAAGTC
TCTGATTTCGGTCTAAGTGCCCTGGCCGAGTCCACGAGACAAGATGGCCTCCTCCACACCACCTGTGGAACTCCAGCTTA
TGTTGCTCCTGAAGTGCTTAGCAGGAGAGGCTATGATGGTGCGAAGGCTGACATATGGTCATGTGGAGTAATTCTGTTTG
TGCTGGTGGCTGGTTTCCTTCCTTTCCATGACACAAATCTTATAGAGATGTATAGGAAGATCTCCAGGGCTGAATATAGA
TGCCCTCGCCCTTTTTCAGTTGAGCTGAGGGATCTACTGTATAAGATTCTTGATCCAGACCCAAGCACTAGAGCTTCCGT
TTCAAGGATAAAGAGAAGCGCTTGGTACAGGAAACCCGTCGATGTAAATGGACTGAAGATTAAACAAGAAACAAGAGACA
AGGTTCAGAAAGGTGAACCCACAACCTCTGAATCAACAGAAGGCAGCAATTCAGAGGTTAACCAAGAGGCGTCATCAAGC
CTCACAAACTTGAATGCCTTTGACATAATTTCTCTCTCAACGGGATTTGACCTATCCAATTTATTTGAAGAAAAGTATGG
CCGGAGGGAGGACAGATTTACCACTAGGCAGCCAGCAGAGGCTATATTTGCCAAGCTGAATGAAGTGGCCAATAAATTGA
AGCTCAAAATCAAGAAGAAAGAAAACGGTGTCTTGAAATTGGCAGCACCAAAGGAAGGAATGAAGGGCATTCTTGAGTTT
GACGCAGAGGTTTTTGAGTTTGCGCCTTCTTTGCATTTAGTTGAATTAAAGAAGACCAATGGAGACACTATAGAGTATAA
ACAACTGATGAAAGATGAGATAAGGCCCGCACTTAAGGATGTGGTTTGGGCGTGGCAAGGCGAGTCGCACCCGCTCCCTG
AGAAATTTATCCGAGGAGAGCAGCAGCAGTCACCTTTGCCATC---GCAGCAGCA---------------GCAGCAGCAG
CAATCACCTTTGCCATCGCAGCAGCAGCAGCAGCAATCACCTTTGCCATCGCAGCAGCCACAGGAGTAATCGGCCCCATT
GCCAATCTGCTACTACAAAAGCACAGGACGAGATGCAGCCACTGCTGCCATGGCATCAGCAGTACCTACCAAAAACCATT
GTTGGCAGCACCTATAAACCATGCGGAGCGTTGCAACGG-CAGGACCAGTTTGCCGTCGCAGCAGCCGCATGATGTGTTC
GAACAGCCAGTGCCATATGACTTGTTGACAGACATGTCACTGGTTCATCAGGTTTACCCTGTGTTAGTAG---ATCAGTT
GCCTACCATTTGGCATTTCCCCCTTCTTTTTAGCTCTTTTTGTATTGCTGTATTTTCTTCTGATGTTGTATATTCCCTCT
TTGCCAAAAGCACGCTCAATTTTGGGGACCTTTGTGCACTGCAGAAATTTGTGTTCGGTGTGACTGAAGATATTGAGTAG
CCACAACAGAAATCGTGGCATGCAGCCATCACCATATCTA-GAACACTCTGAACTAGGTAAATGGATGTAACCATGTGAT
ATGTGGAACCCGTGTGAGCGAACAAACATCTATGTGAATTCTGGACATTGACCAGAACTACTGTATATGGAACCTAGAAA
ATTGTTTTTCTGGTTAAAAATTGGTTGTTTATCTTTCCAGTTTTTATATTTTGAATGTTCAT------------------
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------------------------
>chr6A_1
CGCCGACTACCTGGGACCCACAGACAGCGCCT----------CTCCGCCGCACCGCCCCGCCGGCCGTCCTCCACCAGGT
AAAGCTTCGTGCGGTGCTCGCTAGCTCGCTCCGCCGGATGGGCCGGAGAGATCTGCCTGCCGGCGGCCTCCGCCGGCTGC
TTCTCGACCTAGTAGTACTATTCTTTCTCGCCGTTCTATCTTCTCGCGGA----GTTTCCTGGCCGGCTAATTGATCGCC
CTGTGGAGGACAGGGGGATTTTGCTGATAT--------------------GGCAGGGATTTCGATGTTAGCCCCTACGGC
CCTGCCCTGCCATAAGTTCTTGTTCTGGTAACCGGAAGAAGAAGCTGATGC-----------------------------
-TAGATTCTTTATTTTATTTCATTTTTGGGTAAACTGTTTACTG------GAGCAGCCGGAAATC--------CTGTGGC
ATCAGACCGATTGCGGTGTGATGGACCTTCTCGGGGTGTCTGATTTCATACCGCTAGGTGGCCGGCCTGATTAGTTTCCC
AATTGTTGCCATTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGCT-TCTTTAGGCAAATTAACCGTCGGTGCTATGTACTCCCTCCGTCCGGTGAGAA
GTGTACGTCTAGAAATTTTAGGACAAATTATGGAGTGGGCTAAAAATTGCATTGGGAAGATGCAAGCCATCATCTCTCTC
CTCTTAAATCGCCCAACCCCCAATGAGCTAAGTGCACGTAGAAATTAAGAAGACTATGTATAGAATACTATTGGTCGTGA
TTACCGTGTGATGAGAGAAAATACTTTAAAGTGCATTGGGAAGATAGAAGTACACTCTTTTGTGGACAAATTTTAAACCC
AAACGTACGCTCTTCAGCGGACGGAGGGAGTATGTATGCTTGC--AATCACGATGAGATGGGCAGTACAGTC-CCTGAAA
GAGCTATGCTGGATTTTCTTAATTTTGTCATGGACTCCTGAATATGCTTTAATGCTT---GTGCATTTGTAGCAGCTTGA
CCCCCGTTTGTGTTACATTTCGCTCCATGGTTGTTCTGATTAGGTTTGTTTATTTTTCATTGCAGTTCTGGGCTGGTGAC
ACCGTAACGGATTTATCTTGGAAAACTCGGAAGTGCTCCGGGGAGTTTGGCCCGGAATTTACCTGTTGAGTTATCACAAG
AGTGGTGGCTCCATA--CTGGTTCGGTATCTGTGTCTTTACTCCTGGCCTCTGGAGCACCGAAGAAGTGAAGAGTGGGGG
ATATTGTCGTGGTAGGCCACGTACCTATTAATAGACCGCTGTAAACGTAGTGCATAGTGGACACTGAAAGCACTATTCGG
CTTTC----TAAAGATAGATTGCTATAATGGAGGATAGGAGGACAATTCTGATGGACCGTTATGAAATCGGGAGGCAATT
AGGGCAAGGGAACTTTGCCAAGGTATATTATGGTCGGAATCTCGCAGGTGGACAGGCTGTTGCGATAAAGATGATCGATA
AGGAGAAGGTTTCGAGGATTGGCCTAATTGTGCAGATAAAGAGGGAGATCTCAATAATGGGATTGGTAAGGCATCCCAAC
GTGTTGAAGCTTTTCGAGGTAATGGCTAGCAAGAGCAAGATTTACTTTGTTTTGGAGTATGCCAAGGGCGGCGAGCTTTT
CAACAAAATAACCA---AGGGAAAGTTAAGCGAGGATGCTGCGAGGAAATACTTCCATCAGCTCATCAGTGCCGTAGACT
ACTGCCATAGCCGAGGTGTTTATCATCGCGACTTGAAGCCGGAGAACCTACTCCTGGACGAGAATGAAAACCTTAAAGTC
TCTGATTTCGGTCTAAGTGCCCTGGCCGAGTCCACGAGACAAGATGGCCTCCTCCACACCACCTGTGGAACTCCAGCTTA
TGTTGCTCCTGAAGTGCTTAGCAGGAGAGGCTATGATGGTGCGAAGGCTGACATATGGTCCTGTGGAGTAATTCTGTTTG
TGCTGGTGGCTGGTTTCCTTCCTTTTCATGACACAAATCTTATAGAGATGTATAGGAAGATCTCCAGGGCTGAATATAGA
TGCCCTCGCCCTTTTTCAGTTGAGCTGAGGGATCTACTGTATAAGATTCTTGATCCAGACCCAAGCACTAGAGCTTCCGT
TTCAAGGATAAAGAGAAGTGCTTGGTACAGGAAACCCGTCGATGTAAATGGACTGAAGATTAAACAAGAAACAAGAGACA
AGGTTCAGAAAGGTGAGCCCACAACCTCTGAATCAACAGAAGGCAGCAATTCAGAGGTTAACCAAGAAGCGTCATCAAGC
CTCACAAACTTGAATGCCTTTGACATAATTTCTCTCTCAACGGGATTTGACCTATCCAATTTATTTGAAGAAAAGTATGG
CCGGAGGGAGGACAGATTTACCACTAGGCAGCCAGCAGAGGCTATATTTGCCAAGCTGAATGAAGTGGCCAAGAAATTGA
AGCTCAAAATCAAGAAGAAAGAAAACGGTGTCCTGAAATTGGCAGCACCAAAGGAAGGAATGAAGGGCATTCTTGAGTTT
GACGCAGAGGTTTTTGAGTTTGCGCCTTCTTTGCATTTAGTTGAATTAAAGAAGACCAATGGAGACACTATAGAGTATAA
ACAACTGATGAAAAATGAGATAAGGCCCGCACTCAAGGATGTGGTTTGGGCGTGGCAAGGCGAGTCGCACCCGCTCCCTG
AGAAATTTATCCGAGGAGAGCAGCAGCAGTCACCTTTGCCATCA---------------------------CAGCAGCAG
CAACCACCTTTGCCATCGCAGCAGCAGCA------ATCACCTTTGCCATCGCAGCAGCCACAGGAGTAATCGGCCGCATT
GCCAATCTGCTACCACAAAAGCACAGGGCGAGATGCTGGCACTGCTGCCATGGCATCAGCAATACCTACCAAAAACTATT
GTTGGCAGCACCTATAAACCATGCGGAGCGTTGCAACGTCCAGGACCAGTTTGCTGTCGCAGCAGCTGCATGATTTGTTC
AAACAGCCAGTGCCATATGACTTGTTGACAGACTTGTCACCGGTTCATCAGGTTTATCTTGTGTTAGTAGTAGATCAGTT
GCCTACCATTTGGCATTTCCCCCTTCTTTTTAGCTCCTTTTGTATTGCTGTATTTTCTTCTGATGTTGTATATTCCCTCT
TTGCCAAAATCACGCTCAATTTTGGGGACCTTTGTGGACTGCAGAAATTTGTGTTCGGTGTGACTGAAGATATTGAATAG
CCATAACAGAAATCATGACATGCAGCCATCACCATATCTA-GAACACTCTAAACTAGGTAAATGGATGTAACCATGTGAT
GTGTGGAACCTGTGTGAGTGAACAAACATCTATTTGGAATCTGGACATTGACTAGAACTACTGTATATGGAGCCTAGAAA
ATCATT--------------TTGGTTGTTCACCTTTCCAGTTTTTGCATTCTGAATGTTCATCAG--------------C
TAGTGCCTTCTGAAGGAGCTAAATATCATGATTATATCT-------CTTTTTTGGAAAATGATTATATCATATATGTGTC
TAATAGCG--AACGATGTCATCTTCTGATCATCTAATTGCCACCTGCTG-------------------------------
--------------------------------------------------------------------------------
------TCTATGTTTGCCTTTTGCCTTGCAGTCTTATTTGTCACCTGCTGTAATGTCATCTTCTGATCATCTAATTGTCA
CCTGCTATCTTTGCCTTTTGCCTTGCAGTCTTATTTGTCACCTGCTGTAACTTTTCCTGTTTGCATTTGCACGCGAGAGA
TGTTGAGAAACGCCATCCAACGCCCTTGGAATTTTATCTATCCCTCTATTTTTTTCAAGATAATTCAGATCTGTTGGCGA
AAAGGCGAAGAAATAGGTTAGT--
>chr3D_986
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------------AGATAGCTTGATATGATGGATGAGAGGAGGACTATCTTGATGGGCCGTTATGAAATCGGGAAGCAATT
GGGACAAGGAACTTTTGCGAAGGTCTATTATGCCCGAAGTCTTGCAACTGGCCAAGCTGTTGCTATAAAGATGATCAACA
AAGATAAGGTTACGAAGGTTGGACTTATGGAGCAGATAAAGAGGGAGATTTCAGTAATGAGATTGGTGAAGCACCCAAAT
GTCCTGCAGCTTTTTGAGGTTATGGCTACCAAGAGCAAGATTTATTTTGTATTGGAGTATGCTAAAGGTGGTGAGCTTTT
CAACAAGATAGTAAAGGAGGGGAAGCTTAATGAGGATGCCGCCAGGAGGTATTTCCACCAATTGATCAGTGCTATTGACT
ATTGCCACAGCAGGGGCGTTTATCACCGTGATCTGAAGCCTGAAAATCTACTCCTGGATGAGAATGAAAACCTAAAAGTC
TCGGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCAAGGCAGGATGGTCTCCTCCACACCACATGTGGAACTCCAGCTTA
TGTTGCCCCTGAAGTGCTTAGCAGGAAAGGTTATGATGGTGCAAAAGCAGATGTATGGTCCAGTGGAGTAATTCTGTTTG
TGCTTGTGGCTGGTTACCTTCCCTTTCATGAGGCAAATCTCATAGAGATGTATAGAAGGATCTCCAAAGCGGACTTTAAA
TGCCCTCGGTATTTTTCCGCTGAGTTGAAGGATCTATTACATAAAATCCTTGATCCAGATCCCAGTACTAGGATTCCAAT
CTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATGCAAAGAAAACTGAGCCTGAAGCAACGCACA
ACACCTTTTCAGCTGAAGCTGCGTCATCAGGCTCAACAGGATGCAGCACTTCTGAGGGAAATC---AAGGGTCGTTAAGC
CTCCCGAACCTGAATGCATTTGACATCATCTCTCTGTCAACAGGGTTCAATCTATCTGGGTTTTTTGAGGAGGAGTATGC
TCGCAGGGAAGAACGATTTACCACTAGGCAGCCTGTAACAATAGTACTTGCAAAGTTGAAGGAACTGGCCAAACGCTTGA
AGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCAAAGGAAGGAAAGAAGGGGTTTCTTGAGCTT
GATGCCGAGATTTTTGAGGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAAAAAGACTAATGGAGACACTTTGGAGTATCA
AAAGCTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGGTATGGCAAGGTGATCAGCAGCAGCGGTCAG
AGCCGATTCTGCAAGGGGAGCAGCATCACTCACCGTCGCCAACA---------------------------CAGCAGC--
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>chr3A_986
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------------AGATAGCTTGATATGATGGATGAGAGGAGGACTATCTTGATGGGCCGTTATGAAATCGGGAAGCAATT
GGGACAAGGAACTTTTGCGAAGGTGTATTATGCCCGAAATCTTGCAACTGGCCAAGCTGTTGCTATAAAGATGATCAATA
AAGATAAGGTTACCAAGGTTGGACTTATCGAGCAGATAAAGAGGGAGATTTCAGTAATGAGATTGGTGAAGCACCCAAAT
GTCCTGCAGCTTTTTGAGGTAATGGCTACCAAGAGCAAGATTTATTTTGTATTGGAGTATGCTAAAGGTGGTGAGCTTTT
CAACAAAATAGTAAAGGAGGGGAAGCTTAATGAGGATGCTGCTAGGAGGTATTTCCACCAATTGATCAGTGCTATTGACT
ATTGCCACAGCAGGGGTGTTTATCACCGTGATCTGAAGCCTGAAAATCTACTCCTGGATGAGAATGAAAACCTAAAAGTC
TCAGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCGAGGCAGGATGGTCTCCTGCACACCACATGTGGAACTCCAGCTTA
TGTTGCCCCTGAAGTGCTTAGCAGGAAAGGCTATGATGGTGCAAAAGCAGATGTATGGTCCAGTGGAGTAATTCTGTTTG
TGCTTGTGGCTGGTTACCTTCCTTTTCATGAGGCAAATCTGATAGAGATGTACAGAAGGATTTCCAAAGCGGACTTCAAA
TGCCCTCGGTATTTTTCCGCTGAGCTGAAGGAGCTATTACATAAAATCCTTGATCCAGATCCCAGTACTAGGATTACAAT
CTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATGCAAAGAAAACCGAGCCTGAAGCAAAGCACA
ACACCTTTTCAGCTGAAGCTGCGTCGCCAGGCTCGACAGGATGCAGCACTTCTGAGGGAAATC---AAGGGTCATTAAGC
CTCCCAAACCTGAATGCATTTGACATCATCTCTCTGTCAACAGGGTTCAATCTATCTGGGTTTTTTGAGGATGAGTATGG
TCGCAGGGAAGAACGGTTTACCACTAGGCAGCCTGTAACAATAGTACTTACAAAGTTGAAGGAACTGGCCAAACGCTTGA
AGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCAAAGGAAGGAAAGAAGGGGTTTCTCGAGCTT
GATGCCGAGATTTTCGAGGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAAAAAGACTAATGGAGACACTATGGAGTATCA
AAAGCTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGGTATGGCAAGGTGATCAGCACC---------
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>chr3B_986
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------------AGATAGCTTGATATGATGGATGAGAGGAGGACTATCTTGATGGGCCGTTATGAAATTGGGAAGCAATT
GGGACAAGGAAATTTTGCGAAGGTGTATTATGCCCGAAATCTTGCAACTGGCCAAGCTGTTGCTATAAAGATGATCAATA
AAGATAAGGTTACCAAGGTTGGACTTATGGAGCAGATAAAGAGGGAGATTTCAGTAATGAGATTGGTGAAGCACCCAAAT
GTCCTGCAGCTTTTTGAGGTTATGGCTACCAAGAGCAAGATTTATTTTGTATTGGAGTATGCTAAAGGTGGTGAGCTTTT
CAACAAGATAGTAAAGGAGGGGAAGCTTAATGAGGATGCCGCCAGGAGGTATTTCCACCAATTGATCAGCGCTATTGACT
ATTGCCACAGCAGGGGTGTTTATCACCGTGATCTGAAGCCTGAAAATCTACTCCTGGATGAGAATGAAAACCTGAAAGTC
TCAGATTTTGGTTTGAGTGCCCTGGCTGATTGCGCGAGGCAGGATGGTCTCCTGCACACCACATGTGGAACTCCAGCTTA
TGTTGCCCCTGAAGTGCTTAGCAGGAAAGGTTATGATGGTGCAAAAGCAGATGTATGGTCCAGTGGGGTAATTCTGTATG
TGCTTGTGGCTGGTTACCTTCCTTTTCATGAGGCAAATCTGATAGAGATGTATAGAAGGATTTCCAAAGCGGACTTTAAA
TGCCCTCGGTATTTTTCCGCTGAGCTGAAGGAGCTATTATATAAAATCCTTGATCCAGATCCCAGTACTAGGATTCCAAT
CTCTAGGATAAAGAGAAGTGCTTGGTACAGAAGACCAGTTGAGGTAAATGCAAAGAAAACTGAGCCTGAAGCAACGCACA
ACACCTTTTCAGCTGAAGCTGCGTCGTCAGGCTCGACAGGATGCAGCACTTCTGGGGGAAATC---AAGGGTCATTAAGC
CTCCCAAACCTGAATGCATTTGACATCATCTCTCTTTCAACAGGGTTCAATCTATCTGGTTTTTTTGAGGATGAGTATGG
TCGCAGGGAAGAACGATTTACCACTAGGCAGCCTGTAACAATAGTACTTACAAAGTTGAAGGAACTGGCCAAACGCTTGA
AGCTAAAAATTAAGAAGAAAGAAAATGGAGTCCTGAAGTTGGCTGCTCCAAAGGAAGGAAAGAAGGGGTTTCTTGAGCTT
GATGCTGAGATTTTTGATGTAGCCCCTTCTTTTCTCCTAGTTGAGTTGAAAAAGACTAATGGGGACACTTTCGAGTATCA
AAAGTTGGTGAAAGAGGAAGTAAGGCCAGCACTCAAGGATATTGTATGGGTATGGCAAGG--------------------
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>chr6D_1019
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---------------------------------------------ATTTTGATGAATCGCTATGAAATTGGGAGGCTCTT
AGGACAAGGGGACTTGGCAAAGGTATATTATACTCAGGATCTCACAAGTGGACAAGGTGTTGCAATAAAGATGATTGATA
AGGACAAGGTCTCAAGCGTTGAGCTGATGGTGCGGATAAAGAGGGAGATTACATTAATGAATCTGTCAAGACATCCAAAC
GTCCTGAAACTTGTGGAGGTTACGGCTAGCAAGAGCAAGCTTTATTTTGTTTTGGAGTATCCTAAAGATGGTGACCTTTA
CACCACAAATGTCA---TTGGAAGGTTAAGTGAGGATGCTGCGAGGAAGTACTTCCATCAGTTGATTGGTGCCGTGGAGT
ACTGCCATAGCCAAGGTGTTTATCATCGCAACTTGAATCTAGAAAACATACTCCTGGACGAGAATGGCAACCTAAAAATC
TCTGATTTTGGTCTAAGTGTCCTACCTGGGT---CCAGGGAAGATGGCCTCTTCCATTACCCCTGTGGAACTCCAGCTTA
TGTTGCTCCCGAAGTGCTTAGCTGGAGAGGCTATGACGGTGCGAAGGTCGACATATGGTCCTGTGGAGTAATTCTATTTG
CGCTGGTGGCTGGTTACCTTCCTTTCCAAGGCACAGATCGTACAGATTTGTTTAATAAAATTTCCTTAGGGAAATATGAA
TGCCCTTCTTGGATTTCTGTTAAGCTGAAAGATATACTACGTAAGATTCTTGATCTAGATCCAAGCACCAGGGCTTCTGT
TTCAAGCATAAAGGCAAGCGCTTGGTACGGAAATCTCATTGAGGTAAA--------------------------------
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------------------------
>SNPs
----------------------S---------SSSSSSSSSS--------------------------------------
----------S--------------S------------------------------------------------------
---S--------------S------------------S------SS--------SS-S----------------------
--------S------------------------SSSSS-------------------------------------S-SSS
-------------------------S------------------------SS----------S-S---------------
---------------------------------S--S--------------------------S-SSSSSSSS-------
------------S----S---------------S-----------------------S------S---------S-----
---------------------------S----S----S----S--S--S-S----S----S-------S-----------
--------------------------------------------------------------------------------
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-------------------------------------------S--------------S---------------------
--S---------------------------------S---------------------------S------S--------
-----------------------------------------S--S--------S----S------------S--------
-----------------------------------------------------S--------------------------
-----S----------------------------SS--------------------------------------------
-------------------------------------S-S----------------------S-----------------
-----SSSS--S-----------------------S--------S-----------------------------------
---------------------------------------------------S----------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------S-----------------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------S----S-----------------------------
-----------------------------------------S--------------------S--S--------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------SS---------SSSSSSSSSSSSSSS----------
----------------S---------S-----------------------------------------------------
---------------------------------------------S----------------------------------
-----------------------------S---------------S----------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------SS----S-----------------
-S----S-----------------S-------S--S----S------S--------------------------------
-----------S--------------------------------------------------------------------
---------------------------S----------------------------------S-SSSSSSSSSSSSSSS-
------S--S-----------------S---------SSSSSSSSS--S---SS------------S------------S
-S-SSSSSSS-----SS----------S-SSSSS-SSS-SS-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS--------------SS----------S-----------------------------------------------
------------------------------------------------------------------------------S-
--------S-S---S-S--S-----S--------SS-------S----S----------------S-SS-S------S-S
---S--S-------S-------SS
>forward_215
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-----------------------------------CTTTTTGTCTTCTGCCGGCC-------------------------
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------------------------
>reverse_1892
--------------------------------------------------------------------------------
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---------------------------------------------------GCAGGCTGTTGCGATAAAGA---------
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------------------------
>forward_464
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------TTACTGGAGCAGCCGGAAAC----------------
--------------------------------------------------------------------------------
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------------------------
>reverse_2786
--------------------------------------------------------------------------------
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-----------------------------------------------------------------CGAGGAGAAGTATGG
CCGGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>forward_545
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------TCATACCACTAGCTGGCCGA---------------
--------------------------------------------------------------------------------
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------------------------
>reverse_3178
--------------------------------------------------------------------------------
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---------------------------------------------------------CACCTTTGTCATCGCAGCAG---
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------------------------
>forward_3165
--------------------------------------------------------------------------------
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-------------------------GCAGTCACCTTTGCCATCAC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>reverse_4136
--------------------------------------------------------------------------------
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-------------------------------------------------------GTTGGAACCTTGCATCGCTG-----
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--------------------------------------------------------------------------------
------------------------
