>input_sequence_50428
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----------------------------------------CACAGAGCAGAGAGCCGCCCGCCTGAGTGCTACCCGCCGC
TGCTGGTGCCAACAGAGAGCCGCCCGCCCGCCCGCCCGCCTGACTGAATCTTGGTGGGGGAGGAGAGGAGAGATGGGCCT
CGGCGGCGGCGGCGGAGAGGGGATCCTGGCCGTGGCCGTGGTGCCCATGGAGGCCATCCCCATGGCGGAGCCGCAGATCC
TCGCCGGCGGCAAGACCGTCGGCCTGCGGGCGGACCTGCTCGACTGCCACAACTGCCGCCTCCCCCTCAAGCCCCCCATA
TTCAAGGTGAGATCCGCCGGCCGCCCCTCTTCCCCAAGATTCATTTTTCCGTTTTCTTGAATCTGGCACGGCGTGACCGA
GCGT-ATCTGGTGTGCATGAATCTTGGCCGGCAGTGCGACGCCGAGCACCTGGTCTGCTCCTCCTGCCGCGGCGCCCACG
CCGAGGCCTGCGGCGGCCGCGCCGCCGTCCACTCCGCGCTCGCCGACATCTTCGCGGCCGCCGCCACCGTGCCCTGCGGC
TACGAGCGCTACGGCTGCGACGCGGGCGGCGTGGTGTACCACGAGGCGGCCGACCACCGGCGCGCGTGCCAGCACGCGCC
CTGCTGCTGCCCGGACCGCGCGGGCGCGGCCGGCATCGGGGGCTGCGGCTTCGTCGGCTCCCGCCAGGACCTGCTCGACC
ACATCTCCGGGCCCGACCACTCGCGCCCCATCATCGTCGTCCGCTACGGCCAGCCCTGGAACCTCAGCCTGCCGCTCTCG
CGCCGCTGGCACATCCTCGTCGGTGAGGAGGACAAGGCGGTGGCCGCCGCCGCGGGCGCCGACCGGCACCGCAACCTCTT
CCTCGTCTCCCTCGGCGAGCGCGGCGCCACCACGGCCGTGTCGCTGGTGTGCGTCCGGGCGGACGGCACGGCGCCGGGCG
CGCCGCAGTTCGCGTGCAAGCTCGCCGTGGAGAGCGACGGCTGCAGGC------TGACCCTGGAGTCGCCGCTGGTGTGC
AGCAGCTCCCTGTCCGGCGGCCT------GCCCGGCGAGGTCAAGTGCCTGCCGGTGCCCAAAGACTTTCTCTCCGGCGA
CAGTGTGCCCCTCAGCATCCACATCGAGAAGCTCCCGGTTGCCCCCGCTCCTCCTCTAGGACCAGGAGTGGCGCCGGCCT
GTACCTCCCCGGTCGCCGCCACGCCTCCTCCTTGCCCGGCGGCCACCATCCCGCCTTCCCGTCCGTCCTCCGCCGGCTCC
TCCGACAACGTCGCAGTCAAGACGGTGATCACCGATCAGAGCTACAAGAAACGGAAGTCTGCCAACCCAAGGAAGCTGTA
GGGAGGACGCTGATGGTCTGGGTCGACTACGATGATGAACGGCCGACTAGTAGTATGCTTAGCAATAAGCTACGTAGTAT
TTTGTAATGTGCAATCAGCGTTCTGTTTCTTTGTTAATCTGATGATGAAGTCCATGG----TTTTCAGTCTGAAATAACC
AGACACCGTGCAT-------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G572900
TCGGCATCATCATAAACGAGGGCGGCCGGCGCTCCTCCTCATCGGCTCCTCCGCGCTTCGTCAAACCAAAGACGGAACCG
AGGCTCGCGGCCGTGAAAACGGAGCCGGGGCTCCCCGCCGTGAAGACAGAGCACGGCGACGTGGAGCTCGATGAGGAGGC
GACCCTAAAATGGGCGCGCGCCGACTGGCTCAAGATGGAGTGGGAGCGCCAGTGCGCCGCCCTGCAGCACTACGAACAGC
GCCGCCAGGGCCGCGACGAAGGAGGCGTCGTCATCCTCAACGACAACGACGACGACGACGCGCCGCCACCGCCACCGGTC
CGCCATGGCGACGCCGGGCAAGGGTCCAGCAGGGGCGGCCGCGTCAAGGAGGAGAAGACCGCCGCCGACGACGACGCGCC
GCTCCACCGGTCCGCCATGGCGACGCCGGGCAAGGGTCCAGCAGGGGCGGCCGCGTAAAGGAGGAGAAGGCCGCCGCCGA
CGACTACGCCGCGTTCAGCGACTTCTTCGCACCTTCGTTGTAGTTTCGGCTTTTTTGAGATAAATTTGCTATGTAAACTG
TCTTCTTTGTGTAATATATGTCCAGTTTACCGAATTTAGCCGAACTTTATTGAATGTTTTTTTTAATTTAGACGGCGTCT
GGGAACGGTCATGGGATCGGCGACTGGGAATCCAGTTGCCTTAGGCGGCGATTTTACGCGCCCCTTGGGGAACGGCTGGA
GATGGTCTGAGTCTCCTTGATGCCCGAGCTCTCGGATGAATGGCAGATTTCTTTTGAATGTTGCAGTTGGGTGAATGCGG
TTAGGTTAGGTGGATGGTAAAAAGTAAAAACAACTTCTATTCCCAAAGTCTGAACCCGTCAAAATCTGGCTATGGGCACG
GCCCCATCTCATCAGAGACCCCACCAGACCTCCTGTGACGGGGCTCGCACCCGATACCATCTTGATCGGATCCATACCCC
TTAACCCCCTTGACCTCACCTTCGCTCACAAGCGCCAGTACACAGAGCAGAGAGCCGCCCGCCTGAGTGCTACCCGCCGC
TGCTGGTGCCAACAGAGAGCCGCCCGCCCGCCCGCCCGCCTGACTGAATCTTGGTGGGGGAGGAGAGGAGAGATGGGCCT
CGGCGGCGGCGGCGGAGAGGGGATCCTGGCCGTGGCCGTGGTGCCCATGGAGGCCATCCCCATGGCGGAGCCGCAGATCC
TCGCCGGCGGCAAGACCGTCGGCCTGCGGGCGGACCTGCTCGACTGCCACAACTGCCGCCTCCCCCTCAAGCCCCCCATA
TTCAAGGTGAGATCCGCCGGCCGCCCCTCTTCCCCAAGATTCATTTTTCCGTTTTCTTGAATCTGGCACGGCGTGACCGA
GCGT-ATCTGGTGTGCATGAATCTTGGCCGGCAGTGCGACGCCGAGCACCTGGTCTGCTCCTCCTGCCGCGGCGCCCACG
CCGAGGCCTGCGGCGGCCGCGCCGCCGTCCACTCCGCGCTCGCCGACATCTTCGCGGCCGCCGCCACCGTGCCCTGCGGC
TACGAGCGCTACGGCTGCGACGCGGGCGGCGTGGTGTACCACGAGGCGGCCGACCACCGGCGCGCGTGCCAGCACGCGCC
CTGCTGCTGCCCGGACCGCGCGGGCGCGGCCGGCATCGGGGGCTGCGGCTTCGTCGGCTCCCGCCAGGACCTGCTCGACC
ACATCTCCGGGCCCGACCACTCGCGCCCCATCATCGTCGTCCGCTACGGCCAGCCCTGGAACCTCAGCCTGCCGCTCTCG
CGCCGCTGGCACATCCTCGTCGGTGAGGAGGACAAGGCGGTGGCCGCCGCCGCGGGCGCCGACCGGCACCGCAACCTCTT
CCTCGTCTCCCTCGGCGAGCGCGGCGCCACCACGGCCGTGTCGCTGGTGTGCGTCCGGGCGGACGGCACGGCGCCGGGCG
CGCCGCAGTTCGCGTGCAAGCTCGCCGTGGAGAGCGACGGCTGCAGGC------TGACCCTGGAGTCGCCGCTGGTGTGC
AGCAGCTCCCTGTCCGGCGGCCT------GCCCGGCGAGGTCAAGTGCCTGCCGGTGCCCAAAGACTTTCTCTCCGGCGA
CAGTGTGCCCCTCAGCATCCACATCGAGAAGCTCCCGGTTGCCCCCGCTCCTCCTCTAGGACCAGGAGTGGCGCCGGCCT
GTACCTCCCCGGTCGCCGCCACGCCTCCTCCTTGCCCGGCGGCCACCATCCCGCCTTCCCGTCCGTCCTCCGCCGGCTCC
TCCGACAACGTCGCAGTCAAGACGGTGATCACCGATCAGAGCTACAAGAAACGGAAGTCTGCCAACCCAAGGAAGCTGTA
GGGAGGACGCTGATGGTCTGGGTCGACTACGATGATGAACGGCCGACTAGTAGTATGCTTAGCAATAAGCTACGTAGTAT
TTTGTAATGTGCAATCAGCGTTCTGTTTCTTTGTTAATCTGATGATGAAGTCCATGG----TTTTCAGTCTGAAATAACC
AGACACCGTGCATTCC---------------------------TTTTGTTGTAG--------------------------
------------------------------------------------------------------------------TT
ACTGATTCTGCCCGCACATCCTGCATGATATTGATGTGTGTGGTTACTGTGGGGTACATACGTGCTGCTACAGTTCTAGC
ACAGCATCTTCAACAGCTGCTGACGAAAAAAAAGCCCTTTTTCTTGAAATTTATGTGGTCCCGGATTTTGTTGTTGCTGA
TTCTGTACATTTGTGCTGCTACAGTTTTAGCACTTTTTAGTGTTAAGAAAGTCAGAACTTAGGTTTGGAGATTGTCTGAA
CTTTCTTACACTTTCAGATGACATGCAAAATCAACATGGGCGAGTACATGGCAGTTATTGTCACAGGCAGAGAAATCGGG
CGTTGATATCTAACCTATAAACCCTCAAGAAGTGTTAGGCAGGACCAAGGCCTCCACGTCGCCTTAAATCGCTATGAACA
GTACTTGTGCCACCGCATGTAAATTCCGTGCCCCGCCAAGGGCATTTTAGTCTTTTCACGAGCAG---------------
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------------GCAGCCTCCCGTCCCACTCGCCCCCCCTCCTCGTCGCCCTCCTCTCTCTCTCGCTAACCCCTCTCTCT
CTCTCTCTCTCTCCCATCACCCCTACCCACGCCGGCCGCTTCCATCAAGCTCCGACCGCCGCACGCCCCCGAGCATGTTC
GCGTGCCCCTCCTTTCCCTGCCGTGGCCGCGCGTCCTCTGCTCTGCCCAACCCACCCGCTCCACCTCCCCGCAGACGCGC
GCCGAGTCCGAGCGTGCCAAGTTCGCCGGCCCCCGCGCGCGCACCTGCACCGGCTCCACTTCGTCCGGCCCGCGCCACGA
CGCATCCGCCGCGTCGCCTCCTCCTGCGCCACGCCGGCTCCGCCACCCCCTGCAGTGGCTGCGCACCCACGGGCCGCCCG
CAGTGCCCGCACAAGTCGCCCCAATAGGAGAGCAGGTCTGGTGTGGTTTCATGGTGGGTTTTGAGGAGCAGGGGGACTGG
GGAGGGAGTTGGCCATCACTGCCTACCACTGCTTACGAGTCGTCTGCCCCA-----------------------------
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>chr3D_1079
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--------------------------------------CCTGACTGAATCTTGGTG-----GGAGAGGAGAGATGGGCCT
CGGCGGCGGCGGCGGAGATGGGATCCTGGCCG------TGGTGCCGATGGAAGCCATCCCGATGGCGGAGCCGCAGATCG
TCGCCGGCGGCAAGACCGTGGGCCTGCGGGCGGACCTGCTCGACTGCCATAACTGCCGCCTCCCCCTCAAGCCCCCGATA
TTCAAGGTGAGATCTGCCGGCCGCCCCTCTTCTCCAAGATTCGGTTTTTCGTTTTCGTGAATCCGGCATGGCGTGAGGGG
GTCACATCTGGTGTGAATCTTGG-----CGGCAGTGCGACGCCGAGCACCTCGTCTGCTCCTCCTGCCGCGGCGTCCACG
GCGAGGCCTGCGGCGGCCGCGCCGCCGTCCACTCCGCCCTCGCCGACATCTTCGCGGCCGCCGCCACGGTGCCCTGCGGC
TACGAGCGCTACGGCTGCGACGCCGGGGGCGTGGTGTACCACGAGGCCGCCGACCACCGGCGCGCGTGCCAGCACGCGCC
CTGCTGCTGCCCGGACCGCGCCGGGGCGGCCGGCATCGGGGGATGCGGCTTCGTCGGCTCCCGCCAGGATCTGCTCGACC
ACATCTCCGGCCCCGACCACTCGCGCCCCATCATCGTCGTCCGCTACGGCCAGCCGTGGAACCTCAGCCTGCCGCTCTCG
CGCCGCTGGCACATCCTCGTCGGCGAGGAGGACAAGGCGGTGGCCGCCGCCGCGGGCGCCGACCGGCACCGCAACCTCTT
CCTCGTCTCCCTCGGCGAGCGCGGCGCCACCACGGCCGTGTCGCTGGTGTGCGTCAGGGCGGACGGCACGGCGCCGAGCG
CGCCGCAGTTCGCGTGCAAGCTCGCCGTGGAGAGCGACGGCTGCAGGC------TGACCCTGGAGTCGCCTCTGGTGTGC
AGCAGTTCCCTGTCCGGCGGCCT------GCCCACCGAGGTCAAGTGCTTGCCGGTGCCGAAAGACTTTCTCTCCGGCGA
CAGTGTCCCACTCAGCATCCACATCGAGAAGCTTCTGGCTCTCCCTGCTCCTCCTCTAGGACTAGGAGTGTCGCCGGCCG
CTACATCTCCTGTCGCCGCCACCCCTCCTCCTTGTCCGGCCGCCACCATCCCGCCTTCTCGTCCGTCGT---CCGGCTCC
TCCGACAACGTCGCAGTCAAGACGGTGATAACAGATCAGAGCTACAAGAAACGGAAGTCTGCCAACCCAAGGAAGCTGTA
GGGAGGACGACGATGGGCTGGAGTAG-TACGATGATGAATGGTCGACCAGTAG---GCATAGCAATAAGCTACGTATTAT
TTTGTAATGTGCAATCAGTGTTCTGTTTCTTTAATC------TGATGAAGTCCATGG----TTTTTAGTCTGAAATAACC
AGACAGCCTGCATTCCCTTTGTTGAAGCCTGCCTGCATATTTTGTACTCCCTCCGTTCGGAATTATTTGTCGTGAAAATG
AATGTATCTAGAACTAAAATACGGCTAGACATATTCATTTCTGCGATAAGTAATTTCGAACGGACGGAGTAGTGGTTATT
ACTGATTCTGCCTGCACATCCGGCATGATAT------GTGTGGTTACTGTTCGGTACATATGTGCTGCTACAGTTTTAGC
ACAGCATCTTCAACAGCTGCC----AAAAGAAAACCCTTTTTCTTGAAATTTATGTGGTCCCAGATTTTGTTGTTACTGA
TTCTGTACATTTGTGCTGCTACAGTTTTAGCACTTTTTAGTGTTAAGAAACTCAGAACTTAGGTTTGAAGATTGTCTGAA
CTTTCCTACACTTTCAGATGACATGCAAAATCAACATGGGCCAGTATATGCCAGTTATTCTCACCGGCAGAGAAATCGTG
CGTTGCTAT-----------------------------------------------------------------------
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>chr3A_1100
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-----------------------------------------------------------GAGGAGAGGAGAGATGGGCCT
CGGCGGCGGCGGCGGGGAGGGGGTCCTGGCCG------TGGTGCCCATGGAAGCCATCCCGATGGCCGAGCCGCAGATCG
TCGCCGGCGGCAAGATCGTGGGCCTGCGGGCGGACCTGCTCGACTGCCACAACTGCCGCCTCCCCCTCAAGCCCCCGATA
TTCAAGGTGAGATCTGCCGGCCGCCCCTCTTCTCCAAGATTCCGTTTTTCGTTCTCTTGAATCTGGCATGGCGTGAGGGG
GTCACATCTGGCGTGAATCTTGG-----CGGCAGTGCGACGCCGAGCACCTCGTCTGCTCCTCCTGCCGCGGCCTCCACG
GCGAGGCCTGCGGCGGCCGCGCCGCCGTCCACTCCGCCCTCGCCGACATCTTCGCCGCCGCCGCCACCGTGCCCTGCGGC
TACGAGCGCTACGGCTGCGACGCGGGGGGCGTCGTGTACCACGAGGCCGCCGACCACCGCCGCGCGTGCCAGCACGCGCC
CTGCTGCTGCCCGGACCGCGCGGGCGCGGCCGGTATCGGGGGCTGCGGCTTCGTCGGCTCCCGCCAGGATCTGCTCGACC
ACATCTCCGGCCCCGACCACTCGCGCCCCATCATCGTCGTCCGCTACGGCCAGCCCTGGAACCTCAGCCTGCCGCTCTCG
CGCCGCTGGCACATCCTCGTCGGCGAGGAGGACAAGGCGGTGGCCGCCGCCGCGGGCGCCGAGCGGCACCGCAACCTCTT
CCTCGTCTCCCTCGGCGAGCGCGGCGCGACCACGGCCGTGTCGCTGGTGTGCGTCAGGGTGGACGGCACGGCGCCGAGCG
CGCCGCAGTTCGCGTGCAAGCTCGCCGTGGAGAGCGACGGCTGCAGGC------TGACCCTGGAGTCGCCTCTGGTGTGC
AGCAGTTCCCTGTCCGGCGGCCT------GCCCGCCGAGGTCAAGTGCCTGCCTGTGCCCAAAGACTTTCTCTCCGGCGA
CAGTGTGCCCCTCAGCATCCACATCGAGAAGCTTCCGGCTCCCCCTGCTCCTCCTCTAGGACTAGGAGTTGCGCCGGCCT
GTACTTCCCCGGTCGCCGCCACTCCTCCTCCTTGCCCGGCCGCCACCATCCCGCCTTCTCGTCCGTCCT---CCGGCTCC
TCCGACAACGTCGCAGTCAAGACGGTGATAACAGATCAGAGCTACAAGAAACGGAAGTCTGCCAACCCAAGGAAGCTGTA
GGGAGGAGGACAATGGGCCGGAGTAG-TACGATGATGAATGGCCGACTAGTAGTATGCATAGCAATAAGCTACGTATTAT
TTTGTAATGTGCAATCAGTGTTCTGTTTCTTTAATC------TGATGATGAAGTTCATGGTTTTTTAGTCTGAAATAACC
AGACAGCCTGCATTCCCTTTGCTGAAGCCATCCTGCCCTATTATTTTGTTGTGG--------------------------
------------------------------------------------------------------------------TT
ACTGATC--------------------ATAT------GTGTGGTTGCTGTTCGGTACATATGTGCTGCTACAGTTTAAGC
ACAGCATCTTCAACAGGTGCC----AAAAGAAAACCCTTTTTCTTGAAATTTATGTGGTCCCGGATTTTGTTGTTACTGA
TTCTGTGCATTTGTGCTGCTACAGTTTTAGAACTTT--AGTGCTAAGAAACTCAGAACTTAGGTTCGAAGATTGTCTGAA
CTTTCATACACTTCCA----------AAAATCAACATGGGCGAGTACATGGCAGTTATTCTCACAGGCAGAGAAACCGTA
CGTTGCTATAAATGGAACGACCAAACCATATACATATGCCATGTGCAACTTTTGTCTGGTTTTAAATTCAAGAAACATCA
TACTCTTTCACAGCTTTTTACTCGCTCTGTAAACTAATATAAGACGTTTTGAATCGTTGCTTTAGTGATCTAAAACATTT
TATATTAATGTACCGAGGGGGTAGATCATTGTGTACACTGCTTTTTTCATAGTCTATATATATTCTATGTTGCACCGATA
CGGCGACACCGATACAATGATACGAGTACGGCGATACGGGATACGGCAATCTGTAAAAACAGCAATTTGCTTTAGTGATC
TAAAACATTTTATATTAATGTACCGAGGGGGTAGATCATTGTGTACACTGCTTTTTTCATAGTCTATATATATTCTATGT
TGCACCGATACGGCGACACCGATACGATGATACGAGTACGGCGATACGGGATACGGCAATCTGTAAAAACAGCAATATGC
GATACGGCAAGTATATATATAAATAATTATAAAATGACATGTAATAAAAGCCAACATAATAAAATGTGTGAGATGAGATC
AAAATGTTGCCATGGAACTCCCTATAATGCCATGTTGTACTTCTATCTCCTTCCCTAGCAATAGACAGCAGCAACAACAT
CAGCAAGTAATAATTTTATCCCACAAACATCAACAAGCAGCAACACAGCAAGCACACACCACATGAAAGCCAGCAAGCAG
CCAAACATACATCAGATCCAAATTAGTATAGTACTACTACTACCTAATGAGAGAGTCTGCTACCACGGTCTATGGAAGCC
AGCAAGCAGCCAAGCATGCATCAAGATCAAGCACACATCAGTACATCACTAGGGGCTCGGGGTAATTGCTGTTTACCTTG
TGAGTTGCGACGGCGGTGGAGAAGAGCAGAAGATTCAAGCGGAGAGGCGATTCCAGCCGGTGGGGGCGAGTTGAGGCGGC
AGCGAGGCAATTCCAGGCGGCGCCGGTGAGCCACTCCAGGCGGCGAGTGACTCCAATCTGCGGCTGCGGCCGGCGGGGAG
GCTTGTCCAGCGGCGGCGGCTCCCTCGTGCAAGCTCCTATCGTGCGAACAAAACAAAAGAGAGGGAGCCCAGATGCTAGG
GTTAGCCATGGGCCTTCCAGTGGGCTGCCGTGTCGCTCCCGTATCGTAGACGATGCACAGGACGTATCAACGTTTTTTCT
TTTCTTTTTAAATCGGAAAATAGGATACTTCGCCGATACCCGTATCCTAGCTGTATCGTGCGTATCGCCGTATCGGGAAC
GTTTAGTACGTCGATACTCCAGTTTCTGGCGTATCGGTGCTTCCTAGTATATATTCTTAGACATCATCCTTTCCTTGGCT
CTTTCAATAGTCCTCTCTATGTGGTTGTGTCGTCATGTGCGTATTTGTCGCCCCTTCCCTAATAACGGTGAATACCAGAT
GCATTTTTCATCATTGTCGCGTATGTATGGTAGCGTATTTGCTGCCTCTCTTTGGTGTCATAATTAAGAGGGACACATAC
AAACATACATGTCTCTCCTTCGCCAACAGTTGCAACGATCCTACCTTTACCCCGCCTCATCCGCCTCTCCTGCACAAGAC
GATGAAGCACTTCAGGGCTGAAATGTTCTAACTGATCTACTTGTCGTCCAACTAAATTCTCAATTTAATCTAAAATAGAT
AACATTAATAAAAATAGTCTATCTCTCAATATTTTTTTTGTTTTGATACCTAATAGAAAATACTATGAACGCAGATTTAT
GAAACGGCATTGGATACAACAAGCCCAATGACCGTGTCAAGTGGGACATGATCTAGGCTAGAGTCCTTCTAGCGCAAGAA
AAAAAAAACAAAAGGAAGATAGAGAATTCTATGATTAATTTGTTTTGGATACTTGGTTTGTACTTTCTACTTCATAGAAT
AGACACGGGAAACAAAATTTTAGTTTGTTTGAGTGGTTCTTGGGTGTGGGGCATGTCATTGTGAGAGGCCGTCAAATGGG
GTGAGGTGAAATGATGCGCGACGCCTGTGGATGGGAGGAGGTGGGTTGGATGAGCATGACTACCACATGCACAAACTTAC
TTTTAGTAGCAATGAAAATACAAGTTCCAACCTACAAATGGTTTGTTGCATTGCTATGAAACAAGAAAATGATGGTTAAG
TCAACAATAAATGTTTGCAAAAAAGTCAACAATAAATGTTCACAAAAAAGCCAACAATAAATGACTTTTTTATTTTCATC
TGGATTATTATGTTACAAGGCATTTCTTTCTTCTTTTAACCATATCACTCGAGAAGATGTATATTTCTACCTCTACTTCT
CACCATTAGGTCAATCACCGGCTGCGAGGTCATTGCATCATTGCTCTCCTCCAGTGTCATCCCTACTCTGGTGAATCTCT
GCTGCTATACTAGTCTCCTACCTTGTGGTTTTTCTTGCGCAGCCGATGTTGCATCGTTGCTCCACTCTCATTCGCCTACT
CCAACGAATCTTTGCAACAATTCAATGCAAAAGAAGAATAACTCTACAAAATAAAAGGGCCAATGATTTCAGCACACTGT
TCCTATAGGTTAACCCACAATGCTCCTAGGCTCCTAGTATTGGGAGGCAAAATCTGTCCAACTTCTCAACTTAACACATT
TTCGCCAAAAATAAAAACTTCTCAATATGTTATAGCACTAAGCAGGCCTTGTTGCTAGCAGCACATGCCACATGTCTGGT
GAATGTGCTCCTGTGTCCACCCTCGTTTATTAAGAGTGCAGAGGCACAACTTAAGTTGTTTATTTGAGTAGCAGAAGTGA
TTAGTGAATGGAAATCAGAATTGAAGTGAGAATCTTGAGCATCTAATGAATAGAAACGGGCACCTGAGGGCTGAGGCATG
TCCAAAGTGCCATATGCCAAGTTACTCGGCTCCATATGTATTTATCTACCCCACCAAATTTGTCAAGAACATCAACTCGC
TGCATCCTGTGAACTGAGCGACTAATTTTTTTATAAACAAAAGCATCCTCTACCTTATTCACTGCAAGAGGCAAGAAAAC
ACATGTCCACCCGCCACCATCCCTCCTCCTCGTCCAGCCTCCTCCGACTCAAAGTCAGCGATGACAAATCAGAGCAACAA
AACCAGAAATATGGGAAGCCAAGGAAACTGTAGTGGGGATGATGATGATGGAGTAGTACGATATGAATGGTCGACTAGTA
TGCGTAGCAATAATTTATTTTGTAATGTTCAATCAGTGATCTGTTTCTTTAATCTGAAGTCCATGTTTTTTAGTCTGTAA
TAACCATACAGCGTGCATTCCCTTTGTTGAAGCCTGCCTGCACAGCCTGCATATTATTTGTGGTTACTGATTCTGTACAT
ATATGCTGCTACAGTTTTAGCAATTTAGTGTTAAGGAACTCAAAACTTAGGTTTGAAATTTTTCTTTACTTTCATACACT
TTGAGATGACATTATCCATATTTCAGAGGAATATAAAAATCAACATGGGCAAGTATTTGCCAATTATTCTCATGACAGAG
AACCCGTGTGTTTCTTGGGAACGACCAAACCATATAGATATGTGTCATCTGCAACTTTTGCATGGTTTTAAAAGACGATG
ATAAGAGATCAAAGCTACAAGAAACGGAAATCGGTGAACCCAGGGAAGCTGTAGGGAGGACGACGATGGGCTGGAGTAGT
ACGACATGAATTGGTCGACTAGTAGTATGCATAGCAATAAGCTATATTTTGTAATGTGCAATCAGCGTTCTGTTTCTTTA
ATCTGAAGTCCATGGTTTTTAGTCTGAAATAATCAGACACCGTGCATTCCTTTTGTTGAAG
>chr3A_1390
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------------------------------GCAGTGCGACGACGGGCATCTGATGTGCTCGTCCTGCCGCGGCGCGCACG
GCGAGGACTGCGGCCGCGTCGCCGCCCCCTGCCGCCTGGCA---GACGCCTACGCCGGCGCCGTCAAGCTGCCGTGCGAC
TACGTCAAGTTCGGCTGCGAGGCGGGGCTCGTCGTCTACCACGACTCCGTGGACCACCGCCGCGCGTGCCAGCACGCGCC
CTGCTGCTGCCCTGAGCGCGACGGGCCCTGGGGCGGCGGTGGCTGCGACTTCACCGGCTCCCGGGAAATGCTCCTCGAGC
ACATCTCCACGA---ACCACTCCCGCCAGGTCATCCTCATGCGCCACGGCCAGACGGGGAGGCTCAGCCTGCCACTGGCA
CGGCGCTGGCAGGTCCTCGTCGACCAGGACGACATGGCCA---------------------ACCGGCATCGGAGCGTGTT
CCTCGTGATCTTGGCCGAGCGCGACAAGGACGCCGCGGTGTCGCTGGTGTGCGTCAGGGCGGACGGCGACGCACCGGGCG
CGCCGCAGTTCTCGTACAAGCTCGCTGTGGAGCACACCGGCAGTGGCGCGAGAGTGACGTTCGAGTTGCCGGTCATGAAA
AGCAGCTCCCTGCCCGCTGGCACGCCATGGCCGGACGAGTTTACCTCCCTGTCGGTGCCGAAAGCGTATCTGTCTGACGA
CATTGTCCCCCTCAACATCCACATTGACAA--------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------SSS---------------------
--------------------------------SSSSSS-------------S--------S------------------S
-------------------S--------------------------------------------------------S---
--------------S-----------------S---------SS----S-------------------S-------SS-S
-SSS-----------S--SSSSSSSSSS----------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------S--------------------S--------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
---------------------------------S----S-S----S----------------S-----------------
----S-----------------S-----------------S-----------------S----------SSS--------
-----------------------------S--S-----------------------------------------------
---------SS-----S----SSSSSS------------S------------------S-----------------S---
------------------S-------------SS-SSSSSSS-----------------------S--------------
-----S-S--------------------------------------------S---------------------------
--------------------------------------------------------------------------------
------------S--------S---------SSSSSS-------------SS--------S--------------S----
--------------------SSSSS----S---S-----------------------------------------S----
--------------------------------------------------S----------------S------------
-----S-----------------------------------------------------S------------------S-
-----S---SS-SSSS-SS-S-SSS-S-S-SSSS-SS-S--S-SS---SSSS-SSSS-SSSSSSS-SSSSSSS-SS-S--
SSSSS-S-SS--S-SSS-SSSSSSSS-SSSSSS-SSSS-SSSS-SS--SSSSS-SSSSSSSSS-----------------
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--------------SS--SS--S---SS----S--SS-------SSSSS-SSSS--SSSSSSSSSSS-S-SSSS-SSSSS
SS-SSSSSS-S-SSS-SSS-SSSS-SS-SSSSSS-SS-S-SSSSSSS-SSSSSS-SSS-SSS-S-SSSSSSS-SS-SS-S
SSSSSSS-SSSSS--SSS-SSSSSSSSSS-SSSSSS-SSS--S-SS-SSSSSSSSSSSS----SS-SSSSSSSSSS-SSS
SSSSSS-S-SSSSSSSSSSSSS-SSSSS-SSS--SSS-SSSSSSSSSSS-SSSS-SSSSS-S--SSSSSSSS-SSS--SS
SSSSS-S--SS-SSSSSSSS-SSS-SS-SSSSSSS-SSSS-SSS--SSSSSSSS-SSSS-SSS-SSSSSSSSSSSS-S-S
SS-S-SSSS--SS-SS-SSSSSSSSSS-SS-SSSSSSSSSSSSSSSSSS--S-SSSSSSSSSSSSSSS-SSSS-SSSSS-
SSSSS-S--SSSS-S-SSSSS-SSS-S-SSSS-SSS--SSS--S-SSS-SS-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_989
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTGACCTCACCTTCGCTCAC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_2347
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTACGATGATGAACGGCCGA----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ACCTCACCTTCGCTCACAAG------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_3055
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------GCATGTAAATTCCGTGCCCC----------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------
