>input_sequence_50427
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-------------------------------------------------------------------------------A
TGGCGACGGTGATGAGGAGATCAGTAACGGCGCTTAGCCTGAGCCAGAGCTCCCTTGCGCCATGCTCGAGGCTGGGACGC
TGCCAAATCCGTCGCGCTATGTGCTCCGGCGCGTGGCAGGAGGGGGAGTCCGAGGCGGCGGTGCGCGATGTCGTGTGCTT
GGGCTCCGGGAGCCTGGACGAGGTGGGAAGCAGGCTGGATCGCCTGAACTTTGCCATATCGCCGGCCCTGGTCAGGCGGG
TGATCGACTCGTGTAGCGAGAGGAGTGATTCGGGGAGGAGGCTGCTGCGGTTCCTGTCGTGGTGCCGCTCCAAGGATCCT
GCCGGATTGGGGGACGAGGAGCACGACAGAGCGGTTGCGGTGCTTGCACGGATGGGTGACCTCACTGCGATGAAAATCGC
CGTTGGAGATGGGGAGAAGGATGGCCGGAGGATGGCCCCCGAGACGTTCACCGCTGTGGTCGAGGCTCTTGTCAAGGCAG
GGAAGGAGGATGAGGCTGTTAGGTTGTTCAGAGGCTTGGAGAGGCAGAAATTGCTGCCTCAGCAAGGCCCGGGTGCTGGA
GGGGAAGGCATATGGTGCAGCAGCCTTGCCATGGTCCAGACATTGTGCATGAAGGGCTATGCTCGTGAGGCACAGGGCGT
TGTGTGGCACCATAAGAGCGAACTCTCAGCTGAGCCAATGGTCAGCATCGTTCAGCGTAGCCTCCTCCATGGATGGTGTG
TCCATGGAAATGCTAAGGAAGCTCGGAGAGTCCTTGATGATATCAAGTCCTCAGGCTGCCCATTGGGATTGCCGTCATTC
AACGACTTCCTAAACTGCGTGTGCCATAGAAACCTCAAGTTCAATCCTTCTGCACTTGTTCCTGAAGCTATGGATATCTT
AACAGAGATGAGGTCCTATGGTGTCACCCCTGATTCGTCCAGCTTCAACATCTTACTGTCTTGTTTGGGACGAGCAAGAA
GAGTGAAAGAAGCATACAGAATCCTCTATTTGATGAGGGAAGGAGAAGAAGGGTGCTCACCTGACTGGGTTAGCTACTAT
CTTGTAGTTAAGGTCCTCTATTTGACCGATAGAATTATCAGAGGGAAAAGGCTTGTAGAAGATATGCTTGAAAGTGGGGT
GCTTCCGACAGCAAAGTTTTTCCATGGCCTCATTGGCATCCTTTGTGGGACAGAGAAAGTTGATCATGCTCTTGACATGT
TCAGAATTATGAAGAGTTGTGAGTTAGTGGACACTCCTACATATGATCTGCTTATAGAAAAGCTTTCTAGGAACGGTAGG
TTCGAGGTTGCAAAGGAGTTATGGGATGATGCTACTAAGAATGGCATTGTGTTAGGGTGCTCATCGGATCTGTTGGATCC
CTTGAAGACAGAAGTATTCAGACCAGTTCGTCCTGCACAAAGACAGGCCTCTCAGAACTGTAAGAGCTTGATTCGAACTA
AGAAGGGTACTGCTGCTGGAGCAATAAATAAGTAG---------------------------------------------
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>chr3B_1_TraesCS3B01G419500
TCACGAACCACAAAACGCAGCACACGATCCACCATGTTCCAGATGCCGCTGATGCAGACCACAATCTGCATCCGCTCCTG
GACTACCTCCCAAACTCCGAGCTGGTGCTAGAGCAAACGTCGTTGCAACGACGGAGCCCGAGGACACATGTCCACCACGG
GGATGTTGTCGCCGCCACGCCATCCTTACTTGAACAGACTGATTTCCAAATCCATCCCAAC-CATAGGATTGATCGCCTC
GTCAGAGTAGGATATGAAGAAACCTTATTCAGTGCCGCCATCGACGCCGCCGAAGCCAAGATGATGATTAACCTAAAAAT
CTAAACTACGAGAGTAAAAAA-GATCCACACGCGTGGATCCTGCGACCCCCCTCACCACCGATGACTGAGGCCGCTGATG
TAGGGGCGGCCACCGGCGTAGGGGAGCCACCGGAGGGCGGCGGTGGGGGAGACTCTTGACGGCAAGTTCACCTTTTCTTT
CTTCGAGCGGAAGAAAGAAAAGCGAA------------------------------------------------------
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-------------------------CCGTTTGTTTCTGTCTCTTCTAATCTTAATCTATGTGCAATGGCTCTTATGGCAA
TTGTTAGCACAAATGTGGTGAT----------------------------------------------------------
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------TTTTCTACTGTTTTTTTAGTTTAATATACACTCACCTGTAG---------------------------------
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------------------------------------------------------------------------------GT
TT-TTTAAGTCTCATG------------------------TATTTTTTTAGGAAATTGTGAACTCTTGTTTTTTTGAAAC
TCTTGTGTGAAATAATTTTTTTCTCTGCACGTGGTTGGATTTGCTACGGGTTACCGGCCCAGT-----------------
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----------------------------------------------------TACCCACCCAAAGGCCGTGTG-------
--GCCTAGGTTCTCCTGGTTGGCCAGCAGTGCTTCTGTTCCGAAATCCGAACCCCGCCGCCGCCGCCGCCGCCGCCTCCG
CCCTCCTCCTCCGTCAGCCTCGCCCCGGAGCAGCGCGTCGTTGGCGGCGGAGGCCGTGTAAACCCATAAAGGTCAGTTCT
CCACGACCCACCACTCCCCCTCCCTCTCTGCTCCAGACCAAATTGTGACCGTATTGGGTTGGGGATTCACCGGGCCGTGA
TGGCGACGGTGATGAGGAGATCAGTAACGGCGCTTAGCCTGAGCCAGAGCTCCCTTGCGCCATGCTCGAGGCTGGGACGC
TGCCAAATCCGTCGCGCTATGTGCTCCGGCGCGTGGCAGGAGGGGGAGTCCGAGGCGGCGGTGCGCGATGTCGTGTGCTT
GGGCTCCGGGAGCCTGGACGAGGTGGGAAGCAGGCTGGATCGCCTGAACTTTGCCATATCGCCGGCCCTGGTCAGGCGGG
TGATCGACTCGTGTAGCGAGAGGAGTGATTCGGGGAGGAGGCTGCTGCGGTTCCTGTCGTGGTGCCGCTCCAAGGATCCT
GCCGGATTGGGGGACGAGGAGCACGACAGAGCGGTTGCGGTGCTTGCACGGATGGGTGACCTCACTGCGATGAAAATCGC
CGTTGGAGATGGGGAGAAGGATGGCCGGAGGATGGCCCCCGAGACGTTCACCGCTGTGGTCGAGGCTCTTGTCAAGGCAG
GGAAGGAGGATGAGGCTGTTAGGTTGTTCAGAGGCTTGGAGAGGCAGAAATTGCTGCCTCAGCAAGGCCCGGGTGCTGGA
GGGGAAGGCATATGGTGCAGCAGCCTTGCCATGGTCCAGACATTGTGCATGAAGGGCTATGCTCGTGAGGCACAGGGCGT
TGTGTGGCACCATAAGAGCGAACTCTCAGCTGAGCCAATGGTCAGCATCGTTCAGCGTAGCCTCCTCCATGGATGGTGTG
TCCATGGAAATGCTAAGGAAGCTCGGAGAGTCCTTGATGATATCAAGTCCTCAGGCTGCCCATTGGGATTGCCGTCATTC
AACGACTTCCTAAACTGCGTGTGCCATAGAAACCTCAAGTTCAATCCTTCTGCACTTGTTCCTGAAGCTATGGATATCTT
AACAGAGATGAGGTCCTATGGTGTCACCCCTGATTCGTCCAGCTTCAACATCTTACTGTCTTGTTTGGGACGAGCAAGAA
GAGTGAAAGAAGCATACAGAATCCTCTATTTGATGAGGGAAGGAGAAGAAGGGTGCTCACCTGACTGGGTTAGCTACTAT
CTTGTAGTTAAGGTCCTCTATTTGACCGATAGAATTATCAGAGGGAAAAGGCTTGTAGAAGATATGCTTGAAAGTGGGGT
GCTTCCGACAGCAAAGTTTTTCCATGGCCTCATTGGCATCCTTTGTGGGACAGAGAAAGTTGATCATGCTCTTGACATGT
TCAGAATTATGAAGAGTTGTGAGTTAGTGGACACTCCTACATATGATCTGCTTATAGAAAAGCTTTCTAGGAACGGTAGG
TTCGAGGTTGCAAAGGAGTTATGGGATGATGCTACTAAGAATGGCATTGTGTTAGGGTGCTCATCGGATCTGTTGGATCC
CTTGAAGACAGAAGTATTCAGACCAGTTCGTCCTGCACAAAGACAGGCCTCTCAGAACTGTAAGAGCTTGATTCGAACTA
AGAAGGGTACTGCTGCTGGAGCAATAAATAAGTAGGATACTCTGTCCCAGGACAAAGCAGGGAGTCTAGGTACTATGGGA
CT-AGTCAACTTATCCGAGCATATTTGCTTCTAATCC-TTTGGTTTGGAACTATGTGATGATGAGTTGATGACCCTTGTT
TCTGTTGTTACTTAATAAACTTAATTAATCAGTTGTCAAATCTTTCCTGAAACTTACATGTAATTACCCTATTTTTATGT
GGAA----TTCCATGACTACTGTTTTAATAAAGTCAAGTGAACTTACTATAATTCAGTGAAGCTGTTACTTTTGCTTTTA
GTATTTTATTGCCGTTCTGACCATTATAGTA-----GTTTGCAAAAATGACTGGCACTCTGGCAGTATTGTATAGCAACT
G----------TCCTTATGTTGAAGTTCTCTATCATAAAGTATACTGTTATGATTAGTTTTTT--TGTTTGCTGACCTTT
CCCCCTTTTCTTTATTGTCACTGTTACAGTTCTGTTTTAAGCGCATATCGAATTTTATGGACATATCTCAGGAGCAACAA
CAAGATTTTGGTGTGCTACTAAAGCAGGGGGCTGAAGGAGTGAGTCAAAACTCCAGACTTATATAGTTTTAGTTTCTCCC
TTACCTGTTTTCAATAGTTTGTTTGCTTGTTTGCAGAGGGTATTTGTTTCTACATTTGTTGGACGAAAATGCGTAATCAA
AGAGCGCTTCTCAAAGAAGTATCGACACCCATTGCTGGACTCAAAGCTGACTCTAAAACGCTTAAATGCTGTTAGTCTCC
TTAACCTATGTGCTTTTCTTTTGAGATAATCTACCCCTA--ACAGTTTTCTTTACGTTAAGATTAATTTTACAAACATTC
TTTCAAAGATGAATAGTATTGA--------TACCAAATTTCTTTCTTATTTTGTTTATCAAGCAGCAAAGAGTTTCATAT
GCTTTTCAGGATAGAATTATAACTCTTGTACAGTTTCGTAATGAAAGAGAATGATAGAATCATAGAGTGATCTGTGTTCA
CGTGTTAGGTTGTAACATGTACAAATGA
>chr2B_2
AACCACGAACCCC------GCACACGATCCACCAGCTTCCAGATGCCGTCGATGTAGACCACAATCTGCATCCGCTCCTA
GACTACCTCCCAAGCTCCATGCCGGCGCTGGAGCAAATGCCGTCGCAACGGCGGAGCCCGAGGACACAGGTCCACCACGA
GGATGTCACCGCCGCCACACCATCCTTGCTTCAACAGACTGATTTCCAAATCCATCCCCAATCATAGGACCGATCGCCTT
GTCGGAGTAGGATCTTAAGAAATTTTATTCAGCGCCGCCATCGCCGCCGCCGAAGCAAAGACGATGAACAACCTAAAAAT
CTAAACTACTAGAGCAAAAAACGATCCACACGCGTGGATCCGGCGACCCCCCTCACCACCGACGACCGA-----------
-------GGCCGGCGGCGGAGGGGAGCTGCCGGAGGGCGGCGGCGTCGGAAACTCCTGGCGGCAAGGTCGCCTTTTCTTT
CTTCGAGCGGAAGAAAGAAAAGTGATCTGCTGATGGCTCCATGATACTAGCATATGATACTCCCCATTGCAACCAACCTA
ACGAATGAAACACGACTTACTATTGCCACTATGCAGCAGGATGATTATAATTATGCTTACTTAAAAATTGAAATACAACT
TAAGCAACATCACAACATTGTGTCTCAAATTTAAATTATGTATATACTTTGGAACAATTTTTTATTCCCGTGAATCTCAC
GTGGTCAATATTCTACATGTCTATTGCACGGGCAAGCTTACTAGTCTATTGAAATGGGCCGGCTCATACCGCGTCTATAG
GAAATTCCGTCAAAATAGAAGGGCCAACACTTCTCCAACGCGAGAGCTATATCTCGCTTCACGCGAGACGGAAGCTGCTC
TCGGCTGAACGGAAAAGCTCCTCACGAAGCAACTGGGTCGACCGTTTCCTGTGTCTTTTGCTTCATTGGCTCACTATTTT
TTCGCTTGCTATTGTTTCTTTTGTTTCACTTTTTTCTTTTTTTCCCCTTTTGTTTCTCTTCGGTTTTGTTTATTTCTTTC
TTGTTTTCATCGGTTTTCTTTGTTCCCCTTTGTTTCTTTCTCTGCACTTGTTTCTTTGGTTTTTTTAATATTCTTTTTTC
TTTGATTTTTTTTTGGATTTCATTATTTTTTCGACTTTCTTTGTTTCTTTAGATTTTCATTCTATATTTTTCGTATACGT
CAAGAACATGTTTCTAACACATGATTATCATTTTTCAAATATAAGATTAATATTTTTTAATATAGGGTCAACACTTTTTC
TATACGCATTTTTAACATTTTCTAATGCTTGATTAATATTTTCTAAATGCAAGATTAAATATTTTTTGAATAGTGGTCAA
AAAAATTCTGTATGCATTTTAAATATTTTCAAATGCTTGATTAACATTTTTCAGATGGAACATAAGTATTTTTTAATACA
TGATCCACATTTTTTCTATATACATTTAATATTGTTCAAATGCTTGACTAATATTTTTCAAAAACAAGTTTAACATTTTT
TAGATATATTATAAGATTAATTTATTTAAATATACATTTAATATATTTTTAATGTTTGATTAACATTTATGAAATACTTT
TTAAATATTTTTTAATACATGGTCATTATTTTTGCTATACCCATTTAACATTTTCAAATACTTGATTAACATTTTTTAAA
TGCTTTATTACCATTTTTTAAATACATGATCAACTTTTTTCACACAATTTCTATTCAAAAAATCTCCCACGAGAAACATT
TTCTTTATACACATTTAACAATTTTCGTATGCTTGGCTAATATTTTTTTATGTAATTTTTTAGTAATATCTTTTTACAAT
ATTTGGAAGTATAAATGAGAGTAAAAATGAAATATAAAAACGTAAAAAAAGAAAGAAACGAGGTCCTGTAATTTTCCTCT
TTAAGACACAATCAGAACACCCAAGGCTGGTCATAATGGTAGTATCATAAATAGTATTGTGCATGTCCACTAGACAATTT
TGATGAGGTGTCATAGAACTAAATGAAAAAAAAGATGGTTGGCTATCATATCATAATACCGTATCATATCATGATACTGT
ATCATAATAAATGCTAGGCTACTATGTGTCACGCATGGCAATAAATAAAACACTACATGATACTAATATATGATATTATG
CATTACGGAGGTAATATCATACACTAGTATCATATGCATGATACTAGCATTTTTTTTGCATGGTAATACATGTCTCTTTA
TATCATAAGGATCATAGTACAAGGCACGTACAAACCGAACTGGCAAGACTGAAAAGACAACAAATCGTTAGCCTTTGCAC
AAAGGAACAACAAACAAGAAGTAAAATTACAATCAAGACCGAAGAAACCTCTAAACTTGACACCAACGCCCGTCACCAGC
CTCTGGAACCACCATAGCAGCCACCAAAGGGAAAAAATGACGAATCATCTTCACACCCGAGCTCGAAGCGGCTCCATCGC
TGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCACCAAAAGCGAAACCATTACCGTTGAACGAATCAGACCAGGGCAAC
ACCCCGGACACGCCATCAAACTCTAGATCTGGCACCTCCACACGACTAAGACGCCGGAGGAGAAAACCACACCTGCCATC
CACAAACCACGAACCCCGCACACGATCCACCATCTTCCAGATGCCGTCGATGCAGATCACAATCTGCATCCGCTTCTAGA
CTACCTCCCAAGCTCCATGCTGGCGCTGGAGCAAACGCCGTCGCAACGGCGGAGCCCGAGGACACAGGTCCACCACGAGG
ATGTCACCGCCGCCACACCATCCTTGCTTCAACAGAATGATTTCCAAATCCATACCAAATCATAGGACCGATCGCCTTGT
TGGAGTAGGATCTTAAGAAATTTTATTCAG------------------------CGCCGCCATCGCCGCCGCCGAAGCAA
AGACGATGAACAACCTAAAAATCTAAACTACTAGAGTAAAAAACGATCCACACGCGTGGATCCGGCGTCCCCCCTCACCA
CCGACGACTGAGGC------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CGCCGGCGGAGGGGAGCCGCCGGAGGGCGGGGCGTCGAAAACTCCTGGCGGCAAGGT
CG------------------------------------------------------------------------------
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---CCTTTTCTTTCTTCGAGCGGAAGAAAGAAAAGCGA------------------------------------------
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>chr3D_530
TTACATCA------------------------------------------------------------------------
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--------------------------------------------------------TATGTGCAATGGCTCTTATGGCAA
TCGTTAGCACAAATGTGGTGAT----------------------------------------------------------
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------TTTTCTACTA-TTTTTTAGTTTAATATAAACTCACCTGAAG---------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
TTCTTTAAGTCTCATG------------------------AACTTTTTTAGGAAATTATGAACTCTTGTTTATTTGAAAC
TCTTGTGTGAATTCTATTTTTTCTCTGCACGTGGTAGGATTTGCTACGGCTTACCGGCCCAGT-----------------
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----------------------------------------------------TACTCACCCAAAGGCCGTGTGGCCTTTG
AGGCCTAGGTTCTCCTGGTTGGCCAGCAGTGCTTCTGTTCCGAACCCTGAACCCCACCGCCGCCGCCGCCGCC-------
--CTCCTCTTCCGTCAGCCTCGCCGCGGAGCAGCGTCA--TTGGCGGCGGAGGCCGTGTAAACCCATAAAGGTCAGTTCT
CCACGACCCACCACTCCCCCTTCCTCTCTGCTCCAGACCAAGTTGTGACCGTATTGGGTTGGGGATTCACCGGGCCGTGA
TGGCGATGGTGATGAGGAGATCAGTAACGGCACTTAGCCTGAGCCAGAGCTCCCTCGCGCCAAGCTCGAGGCTGGGACGC
TGCCGAATCCGTCGCGCCATGTGCTCCGGCGCGTGGCAGGAGGGGGAGTCCGAGGCGGCGGTGCGCGACGTCGTGTGCTT
CGGCTCCGGGAGCCTGGACGAGGTGGGAAGCAGGCTGGATCGCCTGAACTTTGCCATATCGCCGGCCCTGGTCAGGCGGG
TGATCGACTCGTGTAGCGAGAGGAGTGATTCGGGCAGGAGGTTGCTGCGGTTCCTGTCGTGGTGCCGCTCCAAGGACCCC
GCCGGATTGGGGGATGAGGAGCACGACAGGGCGATTGCGGTGCTTGCACGGATGGGTGACCTCACTGCGATAAAAATCGC
CGTTGGAGATGGGGAGAAGGATGGGCGGAGGATGGCCCCGGAGACGTTCACCGCCGTGGTCGAGGCTCTTGTCAAGGCAG
GGAAGGAGGATGATGCTGTTAGGTTGTTCAGAGGCTTGGAGAGGCAGAAATTGCTGCCTCAGCAAGGCCCGGGTGCTGGA
GGGGAAGGCATATGGTGCAGCAGCCTTGCCATGGTCCAGACATTGTGCATGAAGGGCTATGCTCGCGAGGCGCAGGGTGT
TGTGTGGCACCATAAGAGCGAGCTCTCAGCGGAGCCCATGGTCAGCATCGTTCAGCGTAGCCTCCTCCATGGATGGTGTG
TCCATGGAAATGCTAAGGAAGCTCGGAGAGTCCTTGATGATATCAAGTCCTCAGGCTGCCCATTGGGATTGCCGTCGTTC
AACGACTTTCTAAACTGCGTGTGCCACAGAAATCTCAAGTTTAATCCTTCTGCGCTTGTTTCTGAGGCCATGGATATCTT
AACTGAGATGAGGTCCTATGGTGTTACCCCTGATTCCTCCAGCTTCAACATTTTACTCTCTTGTTTGGGACGAGCAAGAA
GAGTGAAAGAGGCATACAAAATCCTCTATTTGATGAGGGAAGGAGAAGAAGGGTGCTCACCTGACTGGGTTAGCTACTAT
CTTGTAGTTAAGGTCCTCTATTTGACCGATAGAATTATCAGAGGGAAAAGGCTTGTAGAAGATATGCTTGAAAGTGGGGT
GCTTCCGACAGCAAAGTTTTTCCATGGCCTCATCGGCATCCTTTGTGGAACAGAGAAAGTTGATCATGCTCTTGACATGT
TCAAAATTATGAAGAGTTGTGGGTTAGTGGACACTCATACATATGATCTGCTTATAGAAAAGCTTTCTAGGAGTGGTAGA
TTCGAGGTTGCAAAGGAGTTATGGGATGATGCTACTAAGAATGGCATTGTGTTAGGGTGCTCATCGGATCTGTTGGATCC
CTTGAAGACAGAAGTATTCAGACCAGTTCGTCCTGCACAAAGACAGACCTCTCAGAACTGTAAGAGCTTGATCCCAACTA
AGAAGGGTACTGCTGCTGGAGCAATAAATAAGTAGGATACTCTGTCCCAGGACAAAGCAGGGAGTCTAGGTACTATGGGA
CTAAGTCAACTTATCCGAGCATATTTGCTTCTAACCCTTTTGGTTTGGAACTATGTGA--------TGATGACCCTTGTT
TTAGTTGTTACTTAGTAAACTCAAGTAATCAGTTGTCAAACCTTTCCTGGAACCTACATGCAATTACCCTATTTTTATGT
GGAGTCCGTTCCATGACTACTGTTTTAATAAAGTCAAGTGAACTTACTATAATTCAGTGAAGCTGTTACTTTTGATTTTA
GTATTTTATTGCCATCTGC-CCATTATAGTACTCTAGTTTGCAAAAATGACTGGCACTCTGGCAGTATGGTGTAGCAACT
CTCC-------TCCTTATCTCGAAGTTCTCTATCATAAATTATATTGTTATGGTTAGTTTTTATCTGTTTGCTGACC-TT
CCCCTTTTTCTTTATTGTCACCGTTACAGTTCTGTTTTGAGTGCACATTGAACTTTATGGACATATCTGAGGAGCAACAA
CAAGATTTTGGTGTGCTACTAAAGCAGGGGGCTGAAGGAGTGAGTCAAAACTCCAGACTTGTATAGTTTCTATTTCTCCC
TTACCTGTTTTCAATAGTTTGTTTGCTTGTTTGCAGAGGGTATTTGTTTCGACATTTGTTGGACGAAAATGCGTAATCAA
AGAGCGTTTTTCAAAGAAGTATCGACACCCAGTGCTGGACTCAAAGTTGACTCTAAAACGCTTAAATGCTGTCAGTCTCC
TTAACCTATGTGCTTTTCTTTTGAGATAATCTACCCCTTTTCCAGTTTTCTTTACGTTAAGATTAATTGTACAAACATTC
TTTCAAAGATGTATAGTATTGCCGTATTGGTACCAAATTTCTTTCTTATTTTGTTTATCAAGCAGCAAAGGGTTTCATAT
GCTTTTAAGGATAGAATTATAACTCTTGTCCAGTTTCATATTGAATGAAGAAGATAGAACCATAGAGTGATCTGTAGTCA
CGTGTTAGGTTGTAACATGTACAAATGA
>chr3A_658
TGG-----------------------------------------------------------------------------
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-------------------------------------------------------------ACTCTTGTTTTTTTGAAAC
TCTTGTGTGAAATCTATTTTTTCTCTGCACGTGGCAGGATTTGCTACGGCTTACCGGCCCAGT-----------------
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----------------------------------------------------TACCCAAAGGGC----------------
--GCCTAGGTTCTCCTGGTTGGCCAGCAGTGCTTCTGTTCCGAACCCCGAACCCCGCCGC------CGCCGCC-------
--CTCCTCCTCCGTCAGCCTCGCCCCGGAGCAGCGCGTCGTTGGCGGCGGAGGCCGTGTAAACCCATAAAGGTCAGTTCT
CCACGACCCACCACTCCCGCTTCCTCTCTGCTCCAGACCAAATTGTGTCCGTATTGGGTTGGGGATTCACCGGGCCGTGA
TGGCGACGGTGATGAGGAGATCAGTAACAGCGCTTAGCCTGATCCAGAGCTCCCTCGCGCCAAGCTCGAGGCTGGGACGC
TGCCGAATCCGTCGCGCTATGTGCTCCGGCGCGTGGCAGGAGGGGGAATCCGAGGCGGCGGTGCGCGACGTCGTGTGCTT
CGGCTCCGGGAGCCTGGACGAGGTGGGAAGCAGGCTGGATCGCCTGAACCTGGCCATATCGCCGGCCCTGGTCAGGCGGG
TGATCGATTCTTGTAGCGAGAGGAGTGATTCAGGCAGGAGGCTGCTGCGGTTCCTATCGTGGTGCCGCTCTAAGGACCTC
GCCGGATTGGGGGATGAGGAGCACGACAGGGCGATTGCGGTGCTTGCCCGGATGGGTGACCTCACCGCTATGAAAATTGC
TGTCGGAGATGGGGAGAAGGATGGCCGTAGGATGGCTCCGGAGACGTTCACCGCTGTGGTCGAGGCTCTTGTCAAGGCAG
GGAAGGAGGATGAGGCTGTTAGGTTGTTCAGAGGCTTGGAGAGGCAGAAATTGCTGCCTCAGCAAGGCCCGGGTGCTGGA
GGGGAAGGCATATGGTGCAGCAGCCTTGCCATGGTCCAGACATTGTGCATGAAGGGCTATGCTCGTGAGGCGCAGGGTGT
TGTGTGGCACCATAAGAGCAAACTCTCAGCGGAGCCCATGGTCAGCATCGTTCAGCGTAGCCTCCTCCATGGATGGTGCG
TCCATGGAAATGCTAAGGAAGCTCGGAGAGTCCTTGATGATATCAAGTCCTCAGGCTGCCCATTGGGATTGCCGTCGTTC
AACGACTTTCTAAACTGCGTGTGCAATAGAAACCTCAAGTTTAATCCTTCTGCGCTTGTTTCTGAGGCCATGGATATCTT
AACTGAGATGAGGTCCTATGGTGTCACCCCTGATTCATCCAGCTTCAACATCTTACTGTCTTGTTTGGGACGAGCAAGAA
GAGTGAAAGAAGCATACAGAATCCTCTATTTGATGAGGGAAGGAGAAGAAGGGTGCTCACCTGACTGGGTTAGCTACTAT
CTTGTAGTTAAGGTCCTCTATTTGACCGATAGAATTATCAGAGGAAAAAGGCTTGTAGAAGATATGCTTGAAAGTGGGGT
GCTTCCGACAGCAAAGTTTTTCCATGACCTCATTGGCATCCTTTGTGGGACAGAGAAAGTTGATCATGCTCTTGACATGT
TCAGAATTATGAAAAGTTGTGAGTTAGCGGACACTCATACATATGATCTGCTTATAGAAAAGCTTTCTAGGAACGGTAGG
TTCGAGGTTGCAAAGGAGTTATGGGATGATGCTACTAAGAATGGCATTGTGTTAGGGTGCTCATCGGATCTGTTGGATCC
CTTGAAGACAGAAGTATTCAGACCAGTTCGTCCTGCACAAAGACAGACCTCTCAGAACTGTAAGAGCTTGATCCGAACTA
AGAAGGGTACTGCTGCTGGAGCAATAAATAAGTAGGATACTCTGTCCCAGGACAAAGCAGGGAGTCTAGGTACTATGGGA
CT-AGTCAACTTATCCGAGCATATTTGCTTCTAAACC-TTTGGTTTGGAACTATGT-ATGATGAGTTGATGACCCTTGTT
TTTGTTGTTACTTAATAAACTCAATTAATCAGTTGTCAAATCTTTCCTGAATCTTACATGTAATTACCCTATTTTTATGT
GGAATCCGTTCCATGACTACTGTTTTTAAT-AGTCAAGTGAAC-TACTATAATTCAGTGAAGCTGTTACTTTTGCTTTTA
GTATTTTATTGCCGTTCTG-CCATTATAGTA-----GTTTGCAAAAATGACTGGCACTCTGGCAGTATTGTATAGCAACT
GCCCTCCTTAATCCTTATGTCGAAGTTCTCTATCATAAAGTATACTGTTATGATTAGTTTTTT--TGTTTGCTGACCTTT
CCCCCTTTTCTTTATTGTCACTGTTACAGTTCTGTTTTAAGCGCACATCGAACTTTATGGACATATCTCAGGAGCAACAA
CAAGATTTTGGTGTGCTACTAAAGCAGGGGGCTGAAGGAGTGAGTCAAAACTCTAGACTTATATAGTTTCAGTTTGTCCC
GTACCTGTTTTCAATAGTTTGTTTGCTTGTTTGCAGAGGGTATTTGTTTCTACATTTGTTGGACGAAAATGCGTAATCAA
AGAGCGCTTTTCAAAGAAGTACCGTCACCCATTGCTGGACTCAAAGCTGACTCTAAAACGCTTAAATGCTGTCAGTCTCC
TTAACCTATGTGCTTTTCTTTTGAGATAATGTACCCCTT--CCAGTTTTCTTTATGTTAAGATTAATTGTACAAACATTC
TTTCAAAGATGAATAGTATTGA--------TACCAAATTTCTTTCTTATTTTGTTTATCAAGCAGCAAAGAGTTCCATAT
GCTTTTAAGGATAGAAGTATAACTCTTGTACAGTTTCATATTGAAAGAGAATGATAGAATCATAGAGTGATCTGTGTTCA
CGTGTTAGGTTGTAACATGTACAAATGA
>SNPs
-S--SSSSSS-SSSSSSSS---------------SS------------SS----S------------------------S
-------------S----SS--S--S---S-------S-S---S------S-----------------S----------S
------SSS---------S--------S---S--------------------------S-S--------SS--------S
---S---------S-S------SS--------S----------S------------S----S-----SS-----------
---------S----S--------------------------S--------------------S---S--SSSSSSSSSSS
SSSSSSS----SS-----S--------SS--------------S-SS---S----S--S-------S--S----------
----------------------S--S------------------------------------------------------
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---------------------------S---------S-----S-SSS-S--SS-S------------------------
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---------------S----------------------------S-----------------------------------
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------------------------------------------------------------------------------S-
---------------------------------------------------------S----------------------
-----------------------------------S-------------S------------------------------
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--------------------------------------------SS----------------------------SSS-SS
SS------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-------------------------------------------------------S------S-----------------
----S---------------------------------------------------------------------------
S-------------------------------------------------------------------------------
----------------------------------S-----------------------------------------S--S
--------------S--------------S---S----------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S-----S--
------------------------------S-----S-------------------------------------------
----------------------------------------------------------------------------S---
--------S--------------------------------S-----------S------S----S--S-----------
---S--------------------------------S-------------------------------------------
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------------------------------------S-------------------------------------------
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----------------------------------------------S-------------------------S-------
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----------------------------------S---------------------------------------------
-S-------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------------------------------------------S------S---------------------------
---------------------------------------------------------------------S----------
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---------S--------------------------------------------------------------S-------
--------------------------------------S--S--------------------------S-----------
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------S------------------------------S--S---------------------------------------
----------------------------
>forward_390
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--------------------------------------------------CCTCACCACCGATGACTGAG----------
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>reverse_3791
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------------------------------TGAGCCAATGGTCAGCATCG------------------------------
--------------------------------------------------------------------------------
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----------------------------
>forward_391
--------------------------------------------------------------------------------
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---------------------------------------------------CTCACCACCGATGACTGAGG---------
--------------------------------------------------------------------------------
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>reverse_3797
--------------------------------------------------------------------------------
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------------------------------------AATGGTCAGCATCGTTCAGC------------------------
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----------------------------
>forward_403
--------------------------------------------------------------------------------
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---------------------------------------------------------------GACTGAGGCCGCTGATG
TAG-----------------------------------------------------------------------------
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>reverse_4004
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---AGAGATGAGGTCCTATGGTGTCA------------------------------------------------------
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----------------------------
>forward_1890
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------------------------------GTGGTTGGATTTGCTACGGG------------------------------
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>reverse_4527
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----------------------------------------------GCCTCTCAGAACTGTAAGAGCT------------
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----------------------------
>forward_4037
--------------------------------------------------------------------------------
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-----------------ATGGTGTCACCCCTGATTCG-------------------------------------------
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>reverse_5290
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---------CTCAAAGAAGTATCGACACCCA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
