>input_sequence_50401
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-----------------------------------------------------------------ATGTCAGGCATGTCG
GCGGCTGTCACTGCAACTGGTAATTAACATGCATACACATGCACCTGACAGAATGAGTAGATTTTAATTGTCTGGTCCTT
AATCAGTTTTTCTTCGGCTAACTCGTGTTCTTGCCTCGATTCATCCAGTATCGGCCGTCTGTGCGACCGTGGCGGTGTTC
ATAACGATGGCCGTGATCAGGCGATGCCGCCACGTGAGGAAGAAAATGCA-----CAAGAAGATCGTGACCAAGATCATG
GAGGAGATAAGTAGGAGGAACCGGGACCGGCGAGCAGCCCCGGACGACGGCGCCGGCGTGGACGACGTGGTCATCGAGAT
TGGTCCGGTGGAGAAGTTTCTCCACGAGATCTTGAACGAGAAGCCGATGCGATTCAGCTCCGGGCAGCTGGCGTCGTGCA
CCGGGAACTACTCCACCGAGCTCGGCTCCGGCGGCTTCGGG-------GTGGTCTACAAGGGGGAGCTTCCCAACGGGCT
GCCCGTGGCGGTGAAGGTTCTCAAGGTGTCCATGAACAAGAAGGTGCGGGAGGGGTTCATGGCGGAGATCGGCACCATCG
GCCGGACCTACCACGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACCCGGACACCAAGGCGCTCGTCTACGAGTAC
CTCGAGAACGGATCGCTGGAGAAGTACCTCTACCGCGACGGGGAAGTCGACGGCGACAGCGACGGCGGGGAGGAGAGGAG
GGAGAGGCTCGAGTGGCGGACGCTGCACAACATCGCCGTCGGCACGGCCAAGGGGATCCGGTATCTGCACGAGGAGTGCC
AGCACAGGATCGTGCACTACGACATCAAGCCGCCCAACATCCTCCTCACCGCCGACTTCACCCCCAAGGTGGCCGACTTC
GGGCTGGCCCGGCTGGGCGAGCGCGAGAACACGCACATGTCGTCGCTCACGGGCGGCGGGCGCGGGACGCCGGGGTACGC
CGCGCCGGAGCTGTGGATGGCGCTGCCGACGACAGAGAAGTGCGACGTTTACAGCTTCGGCATGGTGCTGTTTGAGATCC
TAGGGCAGCGCCGGAATTACGACGCCCGGCTGGAGGACGAGAGCCGCGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAC
GAGCAAGGGGACATGGAGTGCATCGTGTCTGCGGCCGCCGGCATCGGGGAGGCTGACCGGGAGAAGGCGGAGACCATGTG
TAAGGTGGCGCTATGGTGCGTCCAATTCCAGCCGTCGGCGCGGCCGACGATGAGCAGCGTAGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCGGTGAACCCGTTCCACTACGTGTCGAGCGGCGGCAGCTCCAGCGGCTGGGCGTTGTCGA
G------------CGGCAC------CGGCACGTACACGAGCAGCAGCCGGGACAAGGGGAGGGACAGCGAGGTCTCGGCA
GCAAGCGCTCCTGCTCCTAAGCCGAGCGTTGCAATGGTGAAG-----CAAGTCCATTGA---------------------
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>chr2A_1_TraesCS2A01G503700
GTAAACTTAGACGGTGATCTTCATGTATCCTGCAAAGCCCACATGAAACGAAATAGATGCAAACAAA--------CGCAC
GCACGCAATGCGTGAGCCATCATGTACACCGTGAGTCATTGGAG-AGTGCAGGCACAGCACGCGGTCACGCGAGC-GTCC
GTCCACGTCCGCGCGGGACGTGAGTGCGGCCACAGGCCTCACCGCTTGCGACGACGGGCCAGCGCAGGAAGGTGCGCCCG
GCTGCCGCTGAAGCGTTGGACGTG-----GCAGCGGCGTCGATGCCTGATGAAGATGGCGACGGAGTAGACACGTGTTGT
AGACGACAGATGACGGCGGACGATGCAAACCGATCATAGATCGAAAAACCAAAAAAGAACACCGATCAATTGATCGGTGA
GAGAGAAAAACCTCAATTAATGGATC-GAGAAAAAGACTTTTTAGGATAGCCGATCGACCGGATCGGCGGACGAACCCTA
GATACGGGTCGCACAGCCCCCGGTGACGATCATGAAGATCGACCGCCCCGGGGGCGGCGCGGTGCGGAAGCGGCATCGAT
GGCTAGGGTTTTGGATCGAGATTAGGCTGATACCATGCTAGAAGGGAGAAAGGAATTGGTGAAATAGTTTGATGTATTGC
TTGAGCCTCGCAGGCATATATATAAGAGTACAATGATCTACTTGAAGTACAAGGCAAGGCAGAATAATATCCTACGCTAT
CCTATCTTTCCTTAGAATCAATATACTCAACATATCAATCAGCGCCCTGCCTTCTTCTTTCTTGATCGTCTGACATATGC
CATGACGCAGATACCGTTTACAAGTCCAAGCACGCT---------TCAGTTTCGTCAACTTTACCTGTCGAATCAATCAG
TCCCTTGCCAGCATTATCACTATCTTCCCGCTGAGCCATTTTATTAGGGAGGAGTACTAGAGAGTAGAATGATTATCAAC
CCTTGTCTGACCAATGTCATGAACTCGTAATGCAGGAAGCAAGAAGGCGTTGAGAGCTTGGCGGCATGTCAGGCATGTCG
GCGGCTGTCACTGCAACTGGTAATTAACATGCATACACATGCACCTGACAGAATGAGTAGATTTTAATTGTCTGGTCCTT
AATCAGTTTTTCTTCGGCTAACTCGTGTTCTTGCCTCGATTCATCCAGTATCGGCCGTCTGTGCGACCGTGGCGGTGTTC
ATAACGATGGCCGTGATCAGGCGATGCCGCCACGTGAGGAAGAAAATGCA-----CAAGAAGATCGTGACCAAGATCATG
GAGGAGATAAGTAGGAGGAACCGGGACCGGCGAGCAGCCCCGGACGACGGCGCCGGCGTGGACGACGTGGTCATCGAGAT
TGGTCCGGTGGAGAAGTTTCTCCACGAGATCTTGAACGAGAAGCCGATGCGATTCAGCTCCGGGCAGCTGGCGTCGTGCA
CCGGGAACTACTCCACCGAGCTCGGCTCCGGCGGCTTCGGG-------GTGGTCTACAAGGGGGAGCTTCCCAACGGGCT
GCCCGTGGCGGTGAAGGTTCTCAAGGTGTCCATGAACAAGAAGGTGCGGGAGGGGTTCATGGCGGAGATCGGCACCATCG
GCCGGACCTACCACGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACCCGGACACCAAGGCGCTCGTCTACGAGTAC
CTCGAGAACGGATCGCTGGAGAAGTACCTCTACCGCGACGGGGAAGTCGACGGCGACAGCGACGGCGGGGAGGAGAGGAG
GGAGAGGCTCGAGTGGCGGACGCTGCACAACATCGCCGTCGGCACGGCCAAGGGGATCCGGTATCTGCACGAGGAGTGCC
AGCACAGGATCGTGCACTACGACATCAAGCCGCCCAACATCCTCCTCACCGCCGACTTCACCCCCAAGGTGGCCGACTTC
GGGCTGGCCCGGCTGGGCGAGCGCGAGAACACGCACATGTCGTCGCTCACGGGCGGCGGGCGCGGGACGCCGGGGTACGC
CGCGCCGGAGCTGTGGATGGCGCTGCCGACGACAGAGAAGTGCGACGTTTACAGCTTCGGCATGGTGCTGTTTGAGATCC
TAGGGCAGCGCCGGAATTACGACGCCCGGCTGGAGGACGAGAGCCGCGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAC
GAGCAAGGGGACATGGAGTGCATCGTGTCTGCGGCCGCCGGCATCGGGGAGGCTGACCGGGAGAAGGCGGAGACCATGTG
TAAGGTGGCGCTATGGTGCGTCCAATTCCAGCCGTCGGCGCGGCCGACGATGAGCAGCGTAGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCGGTGAACCCGTTCCACTACGTGTCGAGCGGCGGCAGCTCCAGCGGCTGGGCGTTGTCGA
G------------CGGCAC------CGGCACGTACACGAGCAGCAGCCGGGACAAGGGGAGGGACAGCGAGGTCTCGGCA
GCAAGCGCTCCTGCTCCTAAGCCGAGCGTTGCAATGGTGAAG-----CAAGTCCATTGATCCAGTGACGGCATAGG-GTG
AAGCTCCACACGGAGTCTTGCTCTGTTTCCAGTTTACACAAGTAGGAAATGTTTTTTCTCACAAAAAA-GTAAGA--AAT
GTTTTGTAAATTAGCATTATTGACTTATGATTTTTGGG--GAATGCTTTTTTTAAGAAAAGAAAGGCTTCCCCTTTCTAT
TTCCAT--------------------------------------------------------------------------
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-----------------------------------------TAAG-----------------------------------
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----------------------------------------------------------GGAAACCAATAGTACGAGCTAC
AAGCAGAACCACAGCCAAACTCCCAAACTCTGAGA--------------CAGCACACGTGCAAAACAAGAGCAGGAGAGG
GGAGTTA------CTCAAGTCTTAGCAAAATAAACAGGAACATGACCAAACAAAGACACTCGACACCACTTAGACCACTA
TTACTACTACT-------------------------------------------------------------AGAGAAGA
AGCACTCCATCTCCAACAGCTTGCATCAAGCGAGGCC-----------------------------------------AC
CCTTAGGAAGCTTTATACACATCACTTGCTACATGTTTTAGTAGCCTTGTTCCCAAATCCAACATCCTTTTGTTTTGTCC
CTTTGCCTGCAAAATAGACCAAGCCATTATTCCGCAAGCCAAGTCTGAACAACTGCATGTGAAGCAAAGTCTCCATCGCA
TCCAAAACCTTGACTTTGCCTATTGCAGGTCCTCCAATCACGCTATGGCATTCTCCACATGAGTTGATACCTTAGAAATC
TTGGTGCAGACATGTACCAAGGTGTCAACAAAAACAGGGCTTCACGATCACCCGGTGAAGCTAGTTATGTTGATGTTGCG
GGTGCACACGACCGGCCCCTATCCAATCAAGGTGTCAAAGAGCGTCATACGCCAGCCTTTGTTTTTCTTTGAAGGAGAAG
TCTGGAACTCGTTGATGGCCAGATCAAAGAGGACTGATCACACGTAGAACAGTGACTTCGCACGAAGACCACTAGGGCCT
CCGCCTGGCCGATTATTTTGCGAGACACGAGATCCCAAGATCAACCATATCTCGATGCCCACCCCCGGTGAAAGGTGAAG
GTCGTCACCATCATGTCTGGGGCCGATGCTCGGTG
>chr7D_1
GTAAACTTAGACGTTGATCTTCATGTATCCGGTAAAGCC------AAACGAAACTGGCGCAAACAAACAACGACCCGCAT
GCACTCAATGCATGAGCCATCCTGTACACTGTGAGTCATTGGAGCTGTGCAGGCACATCACGCGGGCACGCGAGC-GACC
GTCCACGTCCGCGCGGGACGTGAGTGCGGCCACATGCGACACGGCTTGCGACGACGGGCCAGCGCAGGAAGGTGCGCTCG
GCCGCCGCTAAAGTGCTGGACGTC-----GCAGCGGCCTCGATGCCAGATGAAGATGGCGACGGAGTAGACATATGTTGT
AGACGACGAATGGAGGCGGACGATGCAAACCGATCTTAGATCGGAAAATTAAAAAAGAACATCCACCAATCGATCGGCCA
GAGAGAAAAATCTCAATCAATGGATT-AAGAAAAA--CTCTTTAGGGCAGCCGGTCAATACAACCGGCGGACGAACCCTA
GATACAGGCGGCGCGGATCCCGGTAGCGATCATGGAGATCGACCGCTCCGGAGGCGGCGCAGTGCGGAAGCGGCGGC---
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--------------------------------------G---GTTAGGGTTTTGTATCGAGTTTAGACTGATACCATGTT
A-----------------------------------------------------------------------GAAGGGAG
AGAG--GTATTGATGAAATTG-TTGTTGTATTGCTTGAGCCTCGTGGACACATATATAAAAATAC---------------
----------------------------------AACGACTAACATGGAGTGCAAGACAAATCAGAATACTTACCAGTCT
A-------------------------------------------------------------------------------
------------------TGCTATGTTTCCAATATAATCACGTTACTCAACA----------------------------
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-----------------------------------
>chr5A_1
GTAAACTTAGACGTTGATCTTCATGTATCCTGCAAAGCCCACATGAAACGAAACAGGTGCAAACAAA--------CGCAT
GCACGCAATGCGTGAGCCATCATGTACACGGTGAGTCGTTGAAGCAGTGCAGGCACGCCATGTGGGCACGCGAGC-GTCT
GTCCACGTCCGCGCGGGACGTGAGTGCGGCCACAGGCCTCACGGCTTGCGACGACGGGCCAGCGCAGGAAGGTGCGCCCG
GCTGCCGCTGAAGCGTTGGACGTG-----GCAGCGGCGTAGATGCTTGATGAAGATGGCGACGGAGTAAACACGTGTTGT
AGATGACAGACGACGGCGGACGACGCAAATTGATC------CGGAAAACCAAAAAGGAACACCGATCAATTGATCGGCGA
GAGAGAAAAACCTCAATCAATGGATC-GAGAAAAAGACTCTCTAGGATAGCCGATCGACCGAATCGGCGGATGAATCCTA
GGTACGGGTCGCGCAGCCCCCGATGACGATCATGAAGATCGACCGCCCCCGGGGCGGCG---------------------
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------------------------------------GTG---GCTAGGATTTTGGATCAAGATTATGCTGGTACCATGTT
A-----------------------------------------------------------------------GAAGGGAG
AGAG--GGATTGATGGAATAGTTTGATATATTGTTTGAGCCTCGTGGGCATATATATAGGA-------------------
-------------------------------GTAAATGATCATCTTGAAATACAAGTCAAGGTAGAGTAATATCCTACGC
TATCCCAGCT----------------------------------------------------------------------
-------------------------TTTCTAATACAATCACGTTACTCAACA----------------------------
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-----------------------------------
>chr7B_1
GTAAACTTAGACGTTGACCTTCATGTATCCTGCAAAGCCCACATGAAACGAAACAGGTGCAAACAAA--------CGCAT
GCACGTAATGCATGGGCCATCCTGTACGCCGCGAGTCATTGGAGCA-------CACACCACGCATGCACGCGAGC-GGCC
GTCCACGTCCGCACGGGACGTCAGTGCGGCCACAGGCCACACGGCTTGGGACGACGGGCCAGCGCAGGAAGGTGCGTCCG
GCTGCCGCTGAAGCGTTGGACGTG-----GCAGCGGCGTCGATGCTTGATGAAGACGGTGGCAGAGTAGACACGTGTTGT
AGACAACAGACGGCGGCGAACGACATAAACCGATCGTAGATCGAAAAACCAGAAAAAAACACCGATCAATTGATCAGCGA
GAGAGAAAAACCTCAATCAATGGATC-GAGAAAAAGACTCTCTAGGGTAGCCGATCAATACGACCGGTAGACGAACCCTA
GGTACGGGCGGCGCGGCCCCCGGCGGCGGTCATGGAGGCTGACCGCCC--------------------------------
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-------------------------------------CGAGAGCAGCGTGCGGGTGCGGAAGTGGCGGCGG---------
-------------------------------------------CTAGGGTTTAGAACCCGGAA---ACTGATACCATGTT
A-----------------------------------------------------------------------GAAGAGAG
AGATGAGGATTGGTGGAATTG-TTGTTGTATTGCTTGAGCCTCGTAGGCATATATATAGGA-------------------
-------------------------------GTACATGATCATCTTAGAGTACAAGGGAAGGTAGAATAATATCCTACGC
TATCCTAGCT----------------------------------------------------------------------
-------------------------TTTCTAATA--ATCATGATACTCAACA----------------------------
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-----------------------------------
>chr3B_1
GTAAACTT-GATGTTGATCTTCATGTATGCTGCAAAGTCCACATGAAACACAACAGGTGCAAACAGGATGTGACCCGC--
-------ATGCACGGGCCATCATGTACACCGTGAGTCGGTGGAGCAGCGCA-GCACACCACGCGGGCACGCGAGC-GAAC
GTAAAGGTTCGCGCGGGACGTGAGTGCGGCCACAGGCCACACAGCTTGCGACGATGAGCCAGCGCAGGAAGGTGCGCCCG
GCCGCCGCTCAAGCGTTGGACGTCGTGATGCAGCTGCCTCGATGCATGATGAAGATGTCGACGAAGTAGACACGTGTTGT
AGA----------AGACGGGCGACGCAAATAGAACGTAGATCAGAAAATCAAAAAAGAACAACGATCAATCGATCGACAA
GAGAGAAAATCCT-AATCAACAGATCGGAAAAAAAGACTCTCTAGGGCAGCCGGTCAACACGACCGGCCGACGAACCCTA
GGTACGGGCGGCGCGGCCCT-GGTGGCGGTCATGGAGACCGACCGCCC--------------------------------
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-------------------------------------CAAGAGCAGCGCGCGGTG-------------------------
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-----------------------------------
>chr7D_3
--AAATTTAGACGTTGATCTTCATGTATCCTGCAAAGCCCACGTGAAACGAAACAGGTGCAAACAAA--------CGCAT
GCACGCAATGCATGAGCCATCCTGTACACCGTGAGTCATTGGAGCAATGCAGGCACACCACGCGGGCACGCGAGCTGACC
GTCCACGTCCGCGCTGGACGTGAGTGCGCCCACAGGCCACACGGCTTGCGACGACGGGCCAGCACAGGAAGGTGCGCCCG
GCTGCCGCTGAAGCGTTGGACGAG-----GCAGTGGCGTCGATGCCTGATGAAGATGGCGATGCAGTAGACACGTGTTGT
AGACGACAGACGGCGACGGACGACGCAAACCGATCATAGATCGGAAAAT-AAAAAAGAACACCGATCAATTGATCGGTGA
GAGAGAAAAATCTCAATCAATGGATC-GAGAAAAAGACTCTTTATGGTAGCCGATCAACTGGATCGGCGGACGAACTCTA
GATACGGGTCGCGCAGCCCCCGATGGCGATCATGAAGATCGACCGCCC--------------------------------
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-------------------------------------CGGGGGCGGCGCGGT----------------------------
------------------------GTGTAAGCGGCGGTG---ACTAGGGTTTTGGATCGAGGTTAGGCTGATACCATGTT
A-----------------------------------------------------------------------GAAGGAAG
AGAG--GGATTGATGGAATAGTTGTTGTTATTGCTTAAGCCTCATGGGC--ATATATAGGA-------------------
-------------------------------GTACATGATTATCTTGAAGTACAAGACAAGGTAGAATAATATCCTACGC
TATCCTAACT----------------------------------------------------------------------
-------------------------TTTTTAATA--ATCACGATACTTAACA----------------------------
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-----------------------------------
>chr2B_735
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------------------------------CATATCAATCAGTGCCCTGCTGCCTTCTTTCTTAATCGTCTGACATATGC
CATGACGCAGATACCGTTTACAAGTCCGAGCACGCTACACAGCAATCAGTATCGTCAACTTTACCTGTCGAATCAATCAG
TCTCCTGCCATCGTTATCACCATCTTCCCGCTGAGCCATTTATTAGAAGTACTACAG---------GAATGATTATTAAC
CCTTGTCTGACCAATGTCATAAACTCGTAATGCAGGAAGCAAGAAGTCGTTGAGAGCTCGG--GCATGTCAGGCATGTCG
GCGGCTGTCACTGCAACTGGTAAG----ATCCATACACCTGCACCTCACAGAATGAGTAGATTTTAACTGTCTAGTCCTT
GATCAATTTTTCATCAGCTAACTC--GTTCTTGTCTCGGTTCATCCAGTATCGGCGGTCTGTGCGACCGTGGCAGTGTTC
ATAACGATGGCCGTGATCAGGCGATGCCGCCACGTGAGGAAGAAAATGCA-----CAAGAAGATCGTGACCAAGATCATG
GACGAGATCAGCAGAAGGAACCGGGACCGGAGAGCGGCTCCGGACGACGGCGCCGCCGTGGACGACGTGGTCATCGAGAT
AGGCCCCGTGGAGAAGTTTCTGCACGAGATACTCAACGAGAAGCCGATGCGGTTCAGCTCCGAGCAGCTGGCGTCGTGCA
CCGGGAACTACTCCACCGAGCTCGGCTCCGGCGGCTTCGGG-------GTGGTCTACAAGGGGGAGCTCCCCAACGGGCT
GCCCGTGGCGGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTTCAGGAAGGGTTCATGGCGGAGATCGGCACCATCG
GCCGGACCTACCACGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACCCGGACACCAAGGCGCTTGTCTATGAGTAC
CTGGAGAATGGCTCGCTGGAGAAGTACCTCTACCACCATGGGGAAGGAGACGGCGACAGCGACGGCGGGGAGGAGAGGAG
GGAAAGGCTCGATTGGCGGACACTGCACAGCATCGCCGTCGGCACCGCGAAGGGGATCCGGTACCTGCATGAGGAGTGCC
AGCACAGGATCGTCCACTACGATATCAAGCCGCCCAACATCCTCCTCACCGCCGACTTCACGCCCAAGGTGGCCGACTTC
GGGCTGGCCCGGCTGGGCGAGCGCGAGAACACCCACATGTCGTCGCTGACGGGCGGTGGGCGCGGGACGCCGGGCTATGC
GGCGCCGGAGCTCTGGATGGCACTGCCGACGACGGAGAGGTGCGACGTGTACAGCTTCGGCATGGTGCTGTTCGAGATCC
TGGGGCGGCGCCGGAACTACGACGCCCAGCTGGAGGACGAGAGCCGGGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAC
GAGCAGGGGGACATGGAGTGCATTGTCTCCGCGGCCGCCGGCATCGGGGAGGCGGACCGGGAGAAGGCGGAGACCATGTG
CAAGGTGGCGCTGTGGTGCGTGCAGTTCCAGCCTTCGGCGCGGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCGGTGAACCCGTTCCACTATGTGTCGGGCGGTGGCAGCTCCAGCGGCTGGGCGTTGTCGA
GTGGCACCGGCACCGGCGC------CGGCACGTATACGAGCAGCAGCCGGGACACGGGGAGGGACAGCGAGGTCTCGGCA
GCAAGTGCTCCTGCTCCTAAGCCGAGTGATGCAATGGTGACGGATGCCAAGTCCATTGATCCAGTGACGGCATAGG-GTG
AAGCTCCACACGGAGTCT---TCTGTTTCCAGTTTA----AGTAGGAAATGTTTTTTCTAGCAAAAAAAAAGTCAGGAAT
GTTTTGTAAATTAGCATTATTGACTTATGATTTTTCAGGAGAATG-TTTTTTTAAGAAAAGAAAGGCTTCCCCTTCCGAT
TTCCATTAGGGATTAGGACTGCAAACGAGTCGAGCTCGAGCGAGTTGGAGTTGGCTCAGCTCAGCTCATGTGAAAATTCA
AGCGAGCTCGAACTGAGTGAAGCTCATGATCGAGCTGTAGAACATGACTCGTGCTCAACTTGTAACGATCTCGAGTCGAT
CTTGAGCTAGTTTCGAGCTAAATGAGATGGTAAAAATTATAAATCGATTGATGAAAAACAAAAAAACTAAGGTGAATATA
CTGGGAATCTTTGCCGCAAATAGAAGATATTAAACACATAGTCGACCACGTGCCATAATTAGGTCAAATCTTCTCTGCAC
TTAATTCAGTTTCCATGTTCGTTGGTAAATAAAATGGAGACAAATTATGGACAACATATATGGTAATAAATTATCTTATT
TTCATTTAATATATGGCATGATCATTTAACATAATAATATTCTGTCGAGCTAAAATCGAGCGAGCCAACATTGGCTCAAG
ATCGGCTTGTTTCTCGGTCGAGCTACATAAAGTGTTCAAACTCAGCTTGTTTCTTTTCGAGTCGATCTCGAGTCGAGTCA
AAAAACGAATCGATCTCGAGCGGCTCACGAGCCTCGAGCTTTCCTTGCAGCCCTATTAGGGATCCAATAGTACGAGCTAC
AAACAGAACCACACCCAAACTTCCAAATATCTCACCCCCTACTGTCAGGCAGCACACGTGCAAAACAAGAGCAGGAGAGG
GGAGTTAACATATCTCAAGTCTTAGCAAAATAAACAGGAACATGACCAAACAAAGGCACTCGACACCACTTAGACCACTA
TTACTACTACT-------------------------------------------------------------AGA-----
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-----------------------------------
>chr2D_748
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-------------------------------------------GCCCTGCTGCCTTCTTTCTTAATCGTCTGACATATGC
CATGACGCAGATACCGTTTACAAGTCCAAGCACGCTCCACAACAATCAGTTTCGTCAACTTTACCTGTCGAATCAATCAG
TCTCTTGCCAGCATTATCACTATCTTCACGCTGAGCCATTTAACT----AGGAGTAATGGAGAGTAGAATGATTATT-AC
GCTTGTCTGACTAATATCATAAACTCGTAATGCAGGAAGCAAGAAGGCGTTGAGAGCTTGG--GCATGTCAGGCATGTCG
GCGGCTGTCACTGCAACTGGTAAG----ATACATACACCTGCACCTGACAGAATGAGTAGACTTTAACTGTATGGTCCTT
GATCAGTTTTTCATCAGCTAACTC--GTTCTTGTCTCGGTTCATCCAGTATCGGCGGTATGTGCGACCGTGGCGGTGTTC
ATAACGATGGCTGTGATCAGGCGATGCCGTCATGTGAGGAAGAAAATGCA-----CAAGAAGATCGTGACAAAGATCATG
GAGGAGATCAGCAGAAGGAACCGGGACCGGCGAGCAGCCCCGGACGACGGCGGCGCCGTGGACGACGTGGTCATCGAGAT
CGGCCCGGTGGAGAAGTTCCTACACGAGATACTCAACGAGAAGCCGATGCGGTTCAGCTCCGAGCAGCTGGTGTCGTGCA
CCGGGAACTACTCCACCGAGCTCGGCTCGGGCGGCTTCGGG-------GTGGTCTACAAAGGGGAGCTCCCCAACGGGCT
GCCCGTGGCGGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTGCAGGAAGGGTTCATGGCGGAGATCGGCACCATCG
GCCGGACCTACCACGTGCACCTCGTGAGGCTCTACGGCTTCTGCTTCGACCCGGACACCAAGGCGCTGGTCTATGAGTAC
GTGGAGAACGGCTCCTTGGAGAAGTACCTCTACCGAGACGGGGAAGGCGATGGT------GACGGCGGGGAGGAGAGGAG
GGAGAAGCTTGAGTGGCGGACGCTGCACAGCATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTGCACGAGGAGTGCC
AGCACAGGATCGTGCACTACGACATCAAGCCGCCCAACATCCTCCTCACCGCCGACTTCACGCCCAAGGTGGCCGACTTC
GGGCTGGCCCGGCTGGGCGAGCGCGAGAACACGCACATGTCGTCGCTCACGGGCGGCGGGCGCGGGACGCCGGGGTACGC
CGCGCCGGAGTTGTGGATGGCGCTGCCGACGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTCTTGTTCGAGATCC
TGGGGCGACGCCGGAACTACGACGCCCGGCTGGAAGACGAGAGCCGAGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAC
GAGCAAGGGGACATGGAGTGCATCGTGTCCGCGGCCGCCGGCATCGAGGAGGCTGACCGGGAGAAGGCGGAGACCATGTG
TAAGGTGGCCCTGTGGTGCGTCCAGTTCCAGCCGTCGGCGCGGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCGGTGAACCCGTTCCACTACGTGTCGAGCGGCGGCAGCTCCAGCGGTTGGGCGTTGTCGA
G------------CGGCAC------CGGCACGTACACGAGCAGCAGCCGGGACACGGGGAGGGACAGCGAGGTCTCGGCA
GCAAGCGCTCCTGCTCCTAAGCCGAGCGATGCAATGGTGAAGGATGCCAAGTCCATTGATCCAGTGACGGCATAGG-GTG
AAGCTCCACACGGAGTCTTGCTCTGTTTCCAGTTTACACAAGTAGGAAATGTTTTTTCTCGCAAAAAAAGTAAGA--AAT
GTTTTGTAAATTAGCATTATTGACTTATGATTTTTGGG--GAATG-TTTTTTTAAGAAAAGAAAGGCTTCCCCTTCCTAT
TTCCATTAGACTGCTCACAATGGGGAGTAACACAGAGTAGTAACTTGCCGATGTTACTAGTCTATGTTACTACCTCCATA
ATGGGTAGTAAGATATGAGTGGTATCATGAAAGAGTTCATTTATTAGGCTATAGACTCATTATGCCTTGAAATGTGTGAT
GTTACAGTAACTACCTAAGTTATCACAGACCCCTCTCTCCTCATTAATTAGCTGCCACATAAGCAATTTTGTATTGAAAT
GTGTGATGTTACTAGTTAAGTACTCCCATTGTGACTAGTCTTAAG-----------------------------------
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----------------------------------------------------------GGAAACCAATAATACGAGCTAC
AAGCAGAACAA---------------------------------------------------------------------
----------------------TAGCAAAATAAGCAGGAACATAACCAAACAAAGGCACTCGAGGCCACTTAGACCACTA
TTACTACTACTCTCTCCGTCCCAACATAAGTGTCTTGAGCTTAGACACTTATTTTGGGACGTAGAAAGTACTAGAGAAGA
AGCACTCCGTCTCCAACAGCTAGCATCAAGGAGGCGTTCTAGATATTCATCCTCCCAGCCTTGGCACGTTGTACCACTAC
CCTTGCGAAGCTTTATACACATCACTTGCTACATGTTCTAGTAGCCTTGTTCCCAAATCCAACACCTTTTTGTTTTGTTC
CTTTGTCTGCAAAATAGACCAAGCCATTATTC------------------------------------------------
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-----------------------------------
>chr2B_921
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-----------------------------------------------------------------AGAATGATTCTT-AC
CCTTGTTTGATTAATGGCATAAACTCATAATGCAGGAAAGCAAGAGCGCGCT-GAGCTTGG--GCATGTCAGGAATGTCG
GCAGTTGTCACTGCAGTTGGTAAG----ATATATAGGCCTGCACTTAACAGTATGAGTAGATTTTGATTGTCTGGTCCTT
ACTTAATTTTCCACCAACTAACTCGTGTTCTTGTCTCAATTCTTCCGGTATTGGCAGTGTGTGCGGCCGTCGCAGTAGTA
ATAGCGTTGGTCGTGATCAGGCGATGTCGCCGTCTGAGGAAAAAAATGCTCAATGCAAGAAGATAGTGACCAAGATCATG
GAGGGGACCAGCGGAAGGAACTGGGACCGGCGAGCAGCCCCGGAGTATGGTACTTCCATGGACGATATGGTGATTGAGGT
CGACCCCCTCGAGACGTTTCTGCATGAGATCCTCAACGAGAAGCTGATGCGGTTCAATGCGGAGAAGCTGGCGTCGTGCA
CTAGGAACTATTCCATCGAGCACGGCTCCTACTGCTTCGGGTGGTCATGTGGTATACATGGGGGAGCTCCCCAGCGTGCT
GCCCGTGGCGGTGAAGGTGTTCAAGGTGTCCATGAAGAAGAAGGTGCAGGAAGGGTCCATGGCGGAGATCGACACCATCG
CCGAAACCTACCATGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTTGACCCGCACACCAAGGAGCTGGTCTACAAGTAC
TTGGATAGTGGATCGCTCAAGAAGTACCTCTACCGTGACAGGGAAGGCGATGGT------GGT------GAGGAGAGGAG
GGAGAGGCTCGAGTGGCGGACACTGCACAACATCGCCATT-----------GGGGATCCGGTACCTGCACGATGAGTGCG
AGCAGAGGATCATGCACTAAACATC-------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>chr2A_1091
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------TCCTT
GATTAGTTTTCCACCAGCTAACTCA-GTTTTTGTC-----TTATCCAGTATCGGCGGTCTGTGCGACCGTGGCAGTAGTG
ATAACCATCCTGATGATCAGAGGATGCCGCCGTTGGAGGTGGAAAGTTTA-----CAAGAAGTTCATGGCCAAGATCTCC
GACGAGGTCAACAGAAGGAACCGAGAGCTGGAAGCAT------------GCGCTGCCGTGAACGATGTGGTGATCGAGAT
CGGCCCCGTGGAGAAGTTCCTCCACGAGATCCTCAACGAGAAGCCGATGAGGTTCAGCTCGGAGCAGCTGGCGTCGTGCA
CCGGGGACTACTCCACCGAGCTCGGCTCCGGCGGCTTCGGG-------GTGGTCTACAAGGGGGAGCTCCCTAACGGGCT
GCCGGTGGCGGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTGCAGGAGGGGTTCATGGCGGAGATCGGCACCATCG
GCCGGACCTACCACGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACCCCAACACCAAGGCGCTCGTCTACGAGTAC
CTCGAGAACGGCTCGCTGGAGAAGTACCTCTACCGCGACGGGGAAGGCGCCGGCGAGGGC------------GGGAGAAA
GGAGAGGCTCGAGTGGCGGACGCTGCACAGCATCGCCATCGGCACGGCCAAGGGGATAAGATACCTCCACGAGGAGTGTC
AGCAGAGGATCGTGCACTACGACATCAAGCCGGCCAACATCCTCCTCACCGCCGACTTCACGCCCAAGGTGGCGGACTTC
GGGCTGGCCAGGCTGGGCGAGCGCGAGAACCCGCACATGTCGTCGCTGACGGGCGGCGGGCGCGGGACGCCAGGATACGC
TGCGCCGGAGCTGTGGATGGCGCTGCCCACGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGGTGCTGTTCGAGATCC
TGGGGCGGCGCCGGAACTACGACGCCCAGCTGGAGGACGAGAGCCGCGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAC
GAGCAGGGGAACATGGAGTCCATCGTGTCCGCGGCCGCCGGCGTCGGGGAGGCGGACCGGGAGAAGGCGGAGACCATGTG
CAAGGTGGCGCTGTGGTGCGTGCAGTTCCAGCCGTCGGCGCGGCCGACCATGAGCAGCGTGGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCAGTGAACCCGTTCCACTACGTGTCGGGCGGCGGCAGCTCCAGCAGCTGGGCGCTGTCGA
G------------CGGCACCGGCACCGGCACGTTCACGAGCAGCAGCCGTGATACGGGATGGGACAACAAGGTCTCGGCA
GCAAGCACTCCTCG---TAAGCCGACAGATGAAATGGTGAAAGGTGTCAAGTCCACTGAGCCAGTGACGACATAGG-G--
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-----------------------------------
>chr2D_1091
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---------------------------------------------------------------------------TCCTT
GATTAGTTTTCCACCAGCTTACTCA-GTTCTTGTCTCGATTTATCCAGTATCGGCGGTCTGTGCGACTGTTGCGGTAGTG
ATAACCATCGCCGTGATCAGACGATGCCGCCGTTGGAGGTGGAAAGTTTA-----CAAGAAGTTCATGGCCAAGATCACC
GACGAGATCAACAGAAGGAACCGAGAGCTGGAAGCAT------------GCGCCGCAGTGAACGACGTGGTGATCGAGAT
CGGCCCCGTGGAGAAGTTTCTGCATGAGATCCTCAACGAGAAGCCGATGAGGTTCAGCTCGGAGCAGCTGGCGTCGTGCA
CCGGGAAATACTCCACCGAGCTGGGCTCCGGCGGCTTCGGG-------GTGGTCTACAAGGGGGAGCTCCCCAACGGGCT
GCCCGTGGCGGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTGCAGGAAGGGTTCATGGCGGAGATCGGCACCATCG
GCCGGACCTACCACGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACCCGGACACCAAGGCGCTCGTCTACGAGTAC
CTCGAGAACGGCTCGCTGGAGAAGTACCTATACCGCGACGGGGAAGGCGCGGGCGACGGC------------GAGAGAAA
GGAGAGGCTCGAGTGGCGGACGCTGCACAGCATCGCCATCGGCACGGCCAAGGGGATCAGGTACCTGCACGAGGAGTTCC
AGCAGAGGATCGTGCACTACGATATCAAGCCGGCAAACATTCTACTCACCGCCGACTTCACGCCCAAGGTGGCAGACTTC
GGGCTGGCCAGGCTGGGCGAGCGCGAGAACCCGCACATGTCATCGCTGACCGGCGGCGGGCGCGGGACGCCGGGATACGC
GGCGCCGGAGCTGTGGATGGCGCTGCCGACGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGGTGCTGTTCGAGATCC
TGGGGCGGCGCCGGAACTACGACGCCCAGCTGGAGGACGAGAGCCGAGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAC
GAGCAAGGGGACATGGAGTGCATCGTGTCCGCGGCGGCCGGCATCGGGGAGGCGGACCGGGAGAAGGCGGAGACCATGTG
CAAGGTGGCGCTGTGGTGCGTCCAGTTCCAGCCGTCGGCGCGGCCGACCATGAGCAGCGTGGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCGGTGAACCCGTTCCACTACGTGTCGGGCGGCGGCAGCTCCAGCAGCTGGGCGCTATCGA
G------------CAGCACCGGCACCGGCACGTTCACCAGCAGCAGCCGTGATACGGGATGGGACAGCAAGGTCTCGGCA
GCAAGTACTCCTGG---TAAGCCGACAGATGCAATGGTGAAAAGTGTCGAGTCCACTGATCCAGTGACGACATAGGCGTG
GAGCTCCCCACGGAGGCTTGCTCTGCTTCCAGTTTACAT--GTAGGAAATGTTTT-------------------------
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-----------------------------------
>chr2B_1114
TAACTC--------------------------------------------------------------------------
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-----------------------C--GTTCTTGTCTCGATTTATCCAGTATCGGCGGTCTGTGCGACCGTGGCAGTAGTG
ATAACCATCGTTGTGATCAGACGATGCCGCCGTTCGAGGAAGAAATTTTA-----CAAGAAGATCATGGCCAAGATCTCC
GAAGAGATCAACAGAAGGAACAGACAGCTGGAAGCAT------------GCGATGCCATCAACGACGTGGTGATCGAGAT
CGGCCCCGTGGAGAAGTTCCTCCACGACATCCTCAACGAGAAGCCGATGCGGTTCAGCTCCGAGCAGCTGGCATCGTGCA
CCGAGAACTACTCCACCGAGCTCGGCTCCGGCGGCTTCGGG-------GTGGTCTACAAGGGGGAGCTCCCCAACGGGCT
GCCCGTGGCGGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTGCAGGAAGGGTTCATGGCAGAGATCGGCACCATCG
GCCGAACCTACCACGTGCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACCCGGACACCAAGGCGCTCGTCTACGAGTAC
CTCGAGAACGGCTCGCTGGAGAAGTACCTCTACCGCGACGGGGAGGGCGCCGGCACCGGC------------GAGAGAAA
GGAGAGGCTCGAGTGGCAGACGCTGCACGGCATCGCCATCGGCACGGCCAAGGGGATAAGGTACCTCCACGAGGAGTGTC
AGCAGAGGATCGTGCACTACGACATCAAGCCGGCCAACATCCTCCTGACCGCTGACTTCACGCCCAAGGTGGCGGACTTC
GGGCTGGCCAGGCTCGGGGAGCGCGAGAACACGCACATGTCGTCGCTGACGGGAGGCGGTCGCGGGACGCCGGGGTACGC
AGCGCCGGAGCTGTGGATGGCGCTGCCGACGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGGTGCTGTTCGAGATCC
TGGGCCGGCGCCGGAACTACGACGCCCAGCTGGAGGACGAGAGCCGTGAGTGGTTCCCCAAGTGGGTGTGGGACAAGTAT
GAGCAGGGGGGCATGGAGTCCATCGTGTCCGCGGCGGCCTGCGTCGGGGAGGCGGACCGGGAGAAGGCGGAGACCATGTG
CAAGGTGGCGCTGTGGTGCGTCCAGTTCCAGCCGTCGGCGCGGCCGACCATGAGCAGCGTGGTGCGGATGCTGGAGGGGG
AGAT--GGCCATCGTGCCGCCGGTGAACCCGTTCCACTACGTGTCGGGCGGCGGCAGCTCCAGCAGCTGGGCGCTGTCGA
G------------CGGCACCGGCACCGGCACGTTCACCAGCAGCAGCCGTGATACGGGATGGGACAGCAAGGTCTCGGCA
GCAAGTACTCCTCG---TAAGCCGACAGTTGCAATGGTGATAGGTGTCAAGTCCACTGATCCAGTGACGACACAGG-G--
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-----------------------------------
>chr2B_2879
--------------------------------------------------------------------------------
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-----------------------------------CC-----------------------------------------AT
CCTTGCGAAGATTTATACACATCACTTGCTAC-TGTTTTAGTAGCCTTGTTCTCAAATCCAGCACCCTTTTGTTTTGTTC
CTTTGTCTGCAAAATAGACCAAGCCATTATTCCGCAAGTCAAGTCTGAAGAACTACATGTGAAGCAAAGTCTCCATCAGA
TCCAAGACCCTCATTTTGCCTCTTGCAGGTCCTCCAATCATGCTATGACAA---------------ATACCTTAGAAATC
TTGGTGCAGACATGTACTAAGGTGTCAACAAAATTAGAGCTTCGCAATACCCCGGTGAAGCTAGTTATGTTGATGTTGCG
GGTGCACACGACCGACTCCTATCCAATCATGGTGTCAAAGAGCATCATACGCTAGTCTTTGTTTTCCTTCGAAGGAGAAG
TCCGGAACTCGCTGATGGCCAGATCAAACAGGACTGATCACACGTAGAACAATGACTTTGCTCGAAGACCACTAGGGCCA
CCGTCTGGCCGATTATTTTGCGAGACTCAAGATCCCAAGATCAACCATATCTCGATGTCCACCTCCGGCAGAAGGAGGAG
GTTGTCACCACCATGTCCGGGGCCGACGCCCG---
>SNPs
-------------S---------------------------------------S--S----------------------S
---------------------------------------------------------S-------S--------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------S----------------------------------------
------------S-----------------------------------------------S-------------SS-SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-------SSS----------S----------------
--------------------------------------------------------------------------------
--S--------------------------------------S---SSS--------S-S-----------------S---
--------------------S----------------------------------------SS-----------------
-----------------------SSSSS--S-------S-----------------------------------------
------------S--S-----------------S---------------------S------------------------
--------------------------------------------------------------------------------
--------S--S--S----------------------------------------S------------------------
S--S---------------------------S-S-----------------S----------S-----------------
--------------------------------------------------------------------S-----------
------------------S----------------------------S--------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
---------------------------------------------------------------S----------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
---------------------------------S--------------S-----------------------S-------
-S----S---------S---------------------------------------------------------------
-----------------------------S--------------------------------------------------
------------S-----------S-----------------------------------S-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------------------------------------------S-----------------------------S----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------S-------S-----SSSSSSSS---------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------S------------S--------SSS-S---------------------------------------------
----SS----------------------------------------------------------S-------------S-
-----S--------------------------------S----------S----S----------------------SS-
-----S---S-S-S-------S------------------S------S--SSSSSSSSSSSSSSSS--------------
-----------------S---------------SS--S-----S-S--SS------------------------------
--------------S-S------------S-------------S--------S--S---------S---S----------
--S--------S----------------S----------------------S------S--S-----------------S
---S----------------------S-S----------------------------S-----S----SSS----S-S--
--S-------S------S--------S--S--SSS
>forward_652
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TGTATTGC
TTGAGCCTCGCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>reverse_2049
--------------------------------------------------------------------------------
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------------------------------------------------TTACAGCTTCGGCATGGTGC------------
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-----------------------------------
>forward_922
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------TCTTCCCGCTGAGCCATTTT--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------
>reverse_3633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------AGGCCACCCTTAGGAAGCTT----------------------------
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-----------------------------------
