>input_sequence_50400
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGGCGAACCCCT
CCAATTTCCAGATCACTCCCCGCGCCGCGTTCGTGGAGAGCAACGAGCTCAACTTCCGCAGTCTGTACCTGTTCCACACT
TCCCTCGGCGCAAACCAGACCCAGTCCACCGTAATAGACCCGAATGCTAGTACCGGTTTGGGTCAGACGGCTGTTAACAA
CTGGGCGATATGTGATAGCCCTAGCCCCGGTGCCACCGTCGTTGCACGTGCACATGGCCTGCATATCTATGCCGGTAACT
GGCAGAACACCTTCAGCATAACCTTTGAAGTTGAAAGGTACCTACACATATGCTTTCAGTTTCATACTCCCTCCGTCTTA
AAATTCTTATCTTAGATTTGTCTAGATACGGATGTACTTGATACATCCGTATCTAAACAAATCTAAGACAAGAATTTTAG
GACGGAGGGAGTATATGGTTATATATACCTTATATTAGCTGTCAACAAAAATATAAATGCACGGTTATATACCTTTGCCA
AGAAATGCATCTTCATGTGGATTAGTTAAGCTAC----ATTTGATTCTATTATTAGGTGGTGTTGCATATTTCAGTGCAT
GATACAGTTGCCGACCATCTGTGGACATGATACAGGTTTAA-GGGGTCAACGCTTCAGGTGATGGGGATATCTGTTGAGG
AAGGTGAGTGGGCTATTGTTGGTGGCACAGGACAGTTCGCAATGGCAAACGGTGTCATATACAAAAAGTTCCATGAGCAG
AGGAGCGACGGTAACATCATAGAACTCACTGTCCACGCGTTCTGTCCAGTGCTGAAAGGCTCGCCGGTGAGATGAATATC
CATAGAAATAGTTACTTATTTATTTATTTTTAATTAAAACATATTGCTATTTCTCTCCATAGAAACATTTGTTGACTTTT
GATCACGCCGATCCTTTTAATTTAAACAAACATCACATGATTATTATATC---TTGTAGAGCCTTCTCACAAAGCTTGGG
CCATGGGGTGGAAGTGGAGGGTCAGATAAAGACATCGTTGAGGCACCAAGGCGTCTAGAGAGCATCACAGTTAGCAGCGG
CTCGATTATTGATTCAATCAAATTTTCTTATGTTGACCAAGCTGGCCAGAAGCACACAAGTGGACCCTGGGGAGGATCCG
GAGGAAATCCGAACACGGTTCGATCTCCGAATT----AATTTTAATCTGATTTTCTCAATTCCATGTGTAAGCAACTCAA
CACTTCTTTTTTCTTTTGCATGCTATGCAGATCGTACTCGGGGCTTCTGAGTTTGTGAAGGAAGTTTCTGGAACATACGG
CATTTATGACGCAGACCAACACAACATAATAATGTCACTGAAATTCATCACCAATGTGAAGGCTTATGGGCCTTTCGGAG
AAGCGAATGGAACCCCTTTCACCATACCTGTGGAAAACAATAGCAGCATAGTGGGCTTCTTCGGGCGTAGTGGGATATAT
CTCGATGCGCTTGGTGTCTACGTGCGCCCGCTCTAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr2A_1_TraesCS2A01G033900
GTATCGCTGGTCGATAGAATTTGAGGGAATACTTGTTCTACCTTTAGCTCCATATTGGGTTCGACACTCTTATTTATCAA
AGAAGGCTACAAACGATCCCCTATACTTGTGGGTTATCAGTATGCTGCCGCAAGTATTGAGTTTGAGAATATGTGTGATC
TTAACGAACTTCCAGACCAGAATCCAGCCATATTTGAAGAGTTTGTTCAAATGCATCGACAAATTCGGCATCGAGCAACT
CACAAGTAACTGAAGGAAGATCTAATTGATCACCTGTGGACGGTTAAAGGAGGCAACAATGTTGGAGTATAATATTTGAA
CTTTTTTAAATTAAAACTATTGCTGCATTTAAACATTCGAACTATTCTAAACTATGTATGCAGCTATTTGAGTGTGCGGA
ATTTAAAAAAAAGTTGAGATCAGATGTATACGGATAGTTTTGGATGGCCAGTTTCCACAT---ACGTGTCCGCAGACAGA
TGCGATATCTGTTTTGCTGGTT-----TGGAGATGCCCTAACCAGCCCAATGAAAAATATCCCGAGGCACAGATGATCAC
GTCCATGCACATGGATTTATATCCTCTATTTGTTTACTTCCATGAGCCTTGAGCAGAGTGAAGATCTTACCTAGTTGTGA
TGCACAAGGTGTACGTCCGTCTTCGGTTATACAACGTGAAGCGTTACCCATACCTTCATTTATTACTGCCGGTGTATCTG
AGATCCAGTGATTTGCTTGCCGGTGAGACAGGTGCTCGTGATACACAAGCCTGAGTCAGCACCGATTCTCTGGCTTGGCG
GTGGACAATATCATAGATTATCCCATTGTTCAACGATTCCTTTCTATGTGGATGCTATGGTGTTCGTGATGCACATTGCC
ATGGAGTATGCGAGATGCGTGGGATGCTAGCGATCTATAAATACCACTCCCAACCTTCGAGTTCTCACACACAGCGAC--
-CTACTATCTCATAAGCCTATACCATCCGTTG----------AGCCA------CACCCAACTCCGCCATGGCGAACCCCT
CCAATTTCCAGATCACTCCCCGCGCCGCGTTCGTGGAGAGCAACGAGCTCAACTTCCGCAGTCTGTACCTGTTCCACACT
TCCCTCGGCGCAAACCAGACCCAGTCCACCGTAATAGACCCGAATGCTAGTACCGGTTTGGGTCAGACGGCTGTTAACAA
CTGGGCGATATGTGATAGCCCTAGCCCCGGTGCCACCGTCGTTGCACGTGCACATGGCCTGCATATCTATGCCGGTAACT
GGCAGAACACCTTCAGCATAACCTTTGAAGTTGAAAGGTACCTACACATATGCTTTCAGTTTCATACTCCCTCCGTCTTA
AAATTCTTATCTTAGATTTGTCTAGATACGGATGTACTTGATACATCCGTATCTAAACAAATCTAAGACAAGAATTTTAG
GACGGAGGGAGTATATGGTTATATATACCTTATATTAGCTGTCAACAAAAATATAAATGCACGGTTATATACCTTTGCCA
AGAAATGCATCTTCATGTGGATTAGTTAAGCTAC----ATTTGATTCTATTATTAGGTGGTGTTGCATATTTCAGTGCAT
GATACAGTTGCCGACCATCTGTGGACATGATACAGGTTTAA-GGGGTCAACGCTTCAGGTGATGGGGATATCTGTTGAGG
AAGGTGAGTGGGCTATTGTTGGTGGCACAGGACAGTTCGCAATGGCAAACGGTGTCATATACAAAAAGTTCCATGAGCAG
AGGAGCGACGGTAACATCATAGAACTCACTGTCCACGCGTTCTGTCCAGTGCTGAAAGGCTCGCCGGTGAGATGAATATC
CATAGAAATAGTTACTTATTTATTTATTTTTAATTAAAACATATTGCTATTTCTCTCCATAGAAACATTTGTTGACTTTT
GATCACGCCGATCCTTTTAATTTAAACAAACATCACATGATTATTATATC---TTGTAGAGCCTTCTCACAAAGCTTGGG
CCATGGGGTGGAAGTGGAGGGTCAGATAAAGACATCGTTGAGGCACCAAGGCGTCTAGAGAGCATCACAGTTAGCAGCGG
CTCGATTATTGATTCAATCAAATTTTCTTATGTTGACCAAGCTGGCCAGAAGCACACAAGTGGACCCTGGGGAGGATCCG
GAGGAAATCCGAACACGGTTCGATCTCCGAATT----AATTTTAATCTGATTTTCTCAATTCCATGTGTAAGCAACTCAA
CACTTCTTTTTTCTTTTGCATGCTATGCAGATCGTACTCGGGGCTTCTGAGTTTGTGAAGGAAGTTTCTGGAACATACGG
CATTTATGACGCAGACCAACACAACATAATAATGTCACTGAAATTCATCACCAATGTGAAGGCTTATGGGCCTTTCGGAG
AAGCGAATGGAACCCCTTTCACCATACCTGTGGAAAACAATAGCAGCATAGTGGGCTTCTTCGGGCGTAGTGGGATATAT
CTCGATGCGCTTGGTGTCTACGTGCGCCCGCTCTAAGCAACAACA-----GCTAATGTTCTTATTTTCGGCGTTTGTTTC
TCATTTCA----AATAAGAAGATGGGATCGTTG----TCCTTTCTCATCCGGAAGATCCTATGTAGCCACCCGGAC----
-TTTTAGGTCCCTTTGTTGTGATGAATAAAAATATCAGTTTTCTTAT-----ATATGTGCGATGTGTTTCCTG----TAT
GTGTCTTGATTGGGATGCATGTGACGTGAT---AACTATAAGAATTGAGTGGCAGGCACACTCCAGCATGGCTAGGAGCA
AAGCCTAAAGATCTCGTGTTGCAAGGTTGTTCGTTTGGTTTTTCGGGTTTTTTCTTGGACTATATCTTCTGGTTTCCAGA
TGAGCCACGCCATGTGCGCGCCATTTTCATGGTTTTCCGGTTTTCCTTAGCATTTGTTTGTTGGTTTTAGCCAGCCATGT
TCATGGTTCTTTCAATTTCCTTGGCATTCACCATTTTGGTTTTCACACAATCGCTACTAGTACATGTGTGTGCCATGTTT
ATGATTTTTCGCAGTTTTTCATTGGCATGTGTCACTCGGTTTTCAGATCACATGTGTGCGCGCACGCCATGTTCACATGC
AACGAGAGCATGATGAGAACACCATCACCATCCGGAGCAACATCAGTGTCAAGAAAATCTGCCATCATAGAAAGCAAGGA
CGACCACGCCGCCGCCCAGCCAAGAGGACTAGGCTCCATCGGCAACTCAGCCAGTGCCGGTCAGGTGACACGCCCTAGTC
TTTACTACACTTTTTTAGAGAAATCTTACAATAACAGTTGGTTAAACAATCAGTTGGCACAATCTGTTTGAAGCCTTCCA
GGCCTGTTATAAAATGTTAAATGTGTCACTCCCTCAAAGTAACAAGCAACTGAAACCTCAAAGAATAAACACACATACAA
CTAATCATATATAGAGCCAAGGACGCACATTTTAAACAAACAAGACATATGGAAAAATGACAAATCTATGATTTCTCCAT
AACCATAAAGGGCTCCTGACCTGAAC
>chr2B_137
--------------------------------------------------------------------------------
--------------------------------------------------------TTGAATTTGACAACATGGGTAATC
ATATCGAACTTCCAGACTAGAATCCGGGCACATTTCAAGAGTTTGTTCAATA-CATCAACAAATTCGGCATCGAGTAACT
CATGAGCAAGTGAAGGAAGATCTGAATGAGCATCTGTGGGCGGTTAAAGGAGAGAATAATATTTGAGTGTAATATTTGAA
CTTTTTACAATTAGAACTATTGCTGCATTTAAACATTCGAACTATTCTAAACTATGTATGCAGCTATTTGAGTGTGCGGA
CTTTAGAAGAAATGAGAC--CAGATGTATACGGATAGCTTTGGATGGCCGGTTTCCACATAGTACGTGCCCGAGGATGAA
TGCGATGTGTGTTTTGCGGGTTAGCGTTGGAGATGCTCTAAACAGCCCAATGAAAAATATCCGGAGGCACAGATGATCAC
GTCCATGCACATGGATTTATATCCTCTATTTGTTTACTTCCATGAGCCTTGAGCAGAGTGAAGATCTTACCCAGCTGTGA
GCACA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr2B_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTAGCGATCTATAAATACGACTCCCAACCTCCTAGTTCTCACACACAACAATCT
ACTAGTATCTCATAAGCCTACAACATCCCTTG----------AACCAGAGCCCCACCCAACTCACTAGTCACCATGG---
CCAATTTCCAGATAACTCCCCGCGCAGCGTTCGTGGAGAGCAATGAGCTCAACTTCCGCAGCCTGTACCTTTTCCACACT
CCCCTTGGTTCAAACCAGAATCAGTCAGGCATAATAGACTCGAATGTTACTACCGGTTTGGGTGCGACAGTCGTTAACAA
CTGGCCGATATGTGATGGCCCTAGCCCCGGCGCCACCGTTATTGCGCGTGCACAAGGCCTGCATATCTATGCCGGTAACT
GGCAGAATACTTTCAGCATAACATTCGAGGTTGAAAGGTACGTACGCATATGCATTCA----------------------
--------------------------------------------------------------------------------
-----------TACATGGTTA--------------------------------------------TATATATCTTTGTGA
AGAAATATATCTTCATGTTGATTACTTAAACCAC----AAATGATCATGTCATTAGGTAATACTGTATATTGCAGTGCAT
GATATAGTTAACAACCACATCTGAACGTGATATAGGTTTAA-GGGATCAACGCTTCAAGTGATGGGGATATCCGTCGAAG
AAGGTGAGTGGGCTATTGTTGGTGGGACAGGACAGTTCGCTATGGCGATCGGTGTCATCTACAAAAAGTTCCATGAACAA
AGGAGCGATGGTAACATCATAGAACTCACTGTCCATGGATTTTGTCCCATGCTGAAAGGTTCACAGGTGAGATGAATAAC
CAACATATACA-------------------------------ACTACTTTTTGTCTTCACCTAAATCTTCATTATTTTGT
GTCTGC----GTCCCTTTTATTCAAGAAAATACCACATAATTGTCTTATCATATTGTAGAGCCTTCGCACAAAGGTTGGA
CCATGGGGTGGAAATGGAGGCTCAGATAAAGACATCGTCGAGGCACCAAGACGTCTAGAGAGCATCACAGTTAGCAGCGG
CACTATCATTGATTCAATCAAATTTTCTTATGTCGACCAAGCTGGTCAGAAGCGCACTGTTGGACCCTGGGGAGGTTCTG
GAGGAAAACAAAATACGGTCAGTGGACTCTTTTAATAAAATTTTATGTGATTTTCTCAGTTTCATATGTAATCAACA-AG
CACTTCTTTATTCTTT----TGCGATGCAGTTCGTACTCGGCACTTCTGAGTTTGTGAAGGAAGTTTCTGGAACATTCGG
CCTTTATGGCAGAGACAACCACAACATAATAACATCACTGAAATTTGTCACCAACGTGAAGACATACGGGCCTTTCGGAC
AAGCGAAGGGAACCACTTTCACCATACCAGTGCAAAAGAATAGCAGCATCGTGGGCTTCTTCGGACGCAGTGGGATATAT
CTCGATGCACTTGGTGTCTACGTGCACCCTCTCTAAGCTACTAGCTAGCGGCTAATGCTCTCATTTTCGGTGTGTATTTC
TCAATCAATTTGAATAAGCGGAAGAGATCTAGTAGACTTTTCTCTTGTCTAGAAGATCCTATCAAGCCGCCCAACTGGCT
TTTTTATTTACCTTTGTTGTGATGAATAAAAGTATCGGTTTT----T-----ATATGTGGGATGTGATTTGCTTATATAT
GTGTCTTGCCTGGGATGCATGTGATGTGATGACAACTATAAGAGTTGAGT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr2D_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTAGCGATCTATAAATACGACTCCCAACCTTCTAGTTCTCACACACAACAATCT
ACTAGTATCTCATAAGCCTACAACATCCCTTGAACCAGAGC----------CCCTCCCAACTCAGTAGTCACCATGG---
CCAATTTCCAGATAACTCCCCGCGCCGCGTTCGTGGAGAGCAATGAGCTCAACTTCCGCAGCCTGTACCTTTTCCACACT
CCCCTTGGTTCAAACCAGAATCAGTCAGGCATAATAGACTCGAATGTTACTACCGGTTTGGGTGCAACCGTCGTTAACAA
CTGGCCGATATGTGATGGCCC-AGCCCCGGCGCCACCGTTGTTGCGCGTGCACAAGGCCTGCATATCTATGCCGGTAACT
GGCAGAATACTTTCAGCATAACATTCGAGGTTGAAAGGTACGTACACATATGCATTCA----------------------
--------------------------------------------------------------------------------
-----------TACATGGTTATATATA--------------------------------------TATATATCTTTGTGA
AGAAATATATGTTCATGTTGATTACTTAAACTAC----AGATGATTATATCATTAGGTAATACTGTATATTGGAGTGCAT
GATACAGTTACCAACCATATGTGAACGTGATATAGGTTTAA-GGGGTCAACGCTTCAAGTGATGGGGATATCCGTTGAAA
AAGGTGAGTGGGCTATTGTTGGTGGGACAGGACAGTTTGCTATGGCGACCGGTGTCATCTACAAAAAGTTTCATGAGCAA
AGGAGCGACGGTAACATCATAGAGCTCACTGTCCATGGATTCTGTCCCGTGCTTAAAGGTTCACAGGTGAGATGAATAAC
CAACATATACA-------------------------------ACTACTTTTTGTCTTCACCTAAATCTCCATTAGTTTGT
GTCCGC----GTCCCTTTTATTCAAGAAAATATCACATAATTGTGTTATCATATTGTAGAGCCTTCCCACAAAGGTTGGA
CCATGGGGTGGAAATGGAGGCTCAGATAAAGACATCGTAGAGGCACCAAGACATCTAGAGAGCATCACAGTTAGCAGCGG
CACTATCATTGATTCAATCAAATTTTCTTATGTCGACCAAGCTGGTCAGAAGTGCACTGTTGGACCCTGGGGAGGTTCCG
GAGGAAAACAAAATACGGTCAGTGGACTCTTTTAATAAAATTTTATGTGATTTTCTCAGTTTCATATGTAAGCAACAC-A
CACTTCTTTATTCTTT----CGCAATGCAGTTCGTACTCGGCACTTCTGAGTTTGTGAAGGAAGTTTCTGGAACGTTCGG
CCTTTATGGCAGAGACAACCACAACATAATAACATCACTGAAATTTGTCACCAACGTGAAGACATACGGGCCTTTCGGGC
AAGCGAAGGGAACCACTTTCACCATACCCGTGCAAAAGAATAGCAGCATCGTGGGCTTCTTCGGACGCAGTGGGATATAT
CTCGACGCGCTTGGTGTCTACGTGCACCCTCTCTAAGCTACTAGCTAGCGGCTAATGCTCTTACTTCCGGTGTGTATTTC
TCAATCAATTTGAATAACAGGACGGGATCTAGTAGACTTTTCTCTCGTCTAGAAGATCCTATCAAGCCACCCAACTGGCT
TTCTTAATTACCTTTGTTGTGATGAATAAAAGTATCAGTTTT----T-----ATATGTGGGATGTGATTTGCTTATATAC
GTGTCTTGCTTGGGATGCATGTGACGTGATGACAACTATAAGAATTGAGT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr2B_904
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GATCTATAAATACCACTCCCAACCTTCGAGTTCTCACACACAGCGAC--
-CTACTATCTCATAAGCCTATAGCACTGGTTGAGCCAGAGCTAGCCA------CACCCAACTCCGCCATGGCGAACCCCT
CCAATTTCCAGATCACTCCCCGCGCCGCGATCATGGAGAGCAATGAGCTCAACTTCCGCAGCCTGTACCTGTTCCACACT
TCCCTCGGCGCAAATCAGACCCAGTCCACGGTAATAGACCCGAATGCCACTACCGGTTTGGGTCAGACGGCTGTTAACAA
CTGGGCGATATGTGATAGCCCTAGCCCCGGTGCCACCGTCGTTGCACGCGCACAGGGCCTGCATATCTATGCCGGTAACT
GGCAGAATACTTTCAGCATAACCTTTGAGGTTGAAAGGTACGTACGCATAT-----------------------------
--------------------------------------------------------------------------------
------------------------------------------------AAATATAAATGCAAGGTTATATATCTTTGCCT
AGAAATGCATCTTCATGTGGATTAGTTAAGCTAC----ATTTGATTCTATTATTAGGTGGTATTGCATATTTCAGTGCAT
GATACAGTTGCCAACCATCTGTGGACATGATACAGGTTTAAGGGGGTCAACGCTTCAGGTGATGGGGATATCTGTTGAGG
AAGGTGAGTGGGCTATTGTTGGTGGGACAGGACAGTTCGCAATGGCAAACGGTGTCATATACAAAAAGTTCCATGAGCAG
AGGAGCGATGGTAACATCATAGAACTCACTGTCCACGCGTTCTGTCCCGTGCTGAATGGCTCGCCGGTGAGATGAATATG
CATAGAAATATTTACTTATTCATTTATTTTTAATTAGGAGATATTGCTATTTTTCTCCATAGAAATATTCATTGATTTTT
GTTCACACCGATCCTTTTCATTTAAGCAAACATCACATGGTTATTATATC---TTGTAGAGCCTTCTCACAAAGCTTGGA
CCATGGGGTGGAAGTGGAGGGTCGGATAAAGACATCGTTGAGGCACCAAGGCGTCTAGAGAGCATCACAGTTAGCAGCGG
CTTGATTGTTGATTCAATCAAATTTTCTTATGTTGACCAAGCTGGCCAGAAGCACACAGGTGGACCCTGGGGAGGATCCG
GAGGAAATCAAAACACGGTTCGATCTCTGAATT----GACTTTTATGTGATTTTCTCAATTCCATATGTAAGCAACTCAA
CACTTCTTTTTTCTTT----TGCTATGCAGATCGTACTCGGGGCTTCTGAGTTTGTGAAGGAAGTCTCTGGGACACACGG
CATTTTTGACAAAGACCAACACCACATAATAACGTCACTGAAATTCATCACCAATGTGAAGGCTTATGGGCCTTTCGGAG
AAGCAAAGGGAACCCCTTTCACCATACCTGCGGAAAAGAATAGCAGCATAGTGGGCTTTTTCGGGCGTAGTGGGATATAT
CTCGATGCGCTTGGTGTCTACGTGTCCAACTCTAGCTAAGCAA--TAGCGGCTAATGTTCTTATTTTCGGCGTTTGTTTC
TCAATTCA----AATAAGAAGATGAGATTGTTG----TCCTTTCTCATCCAGAAGATCCTATGTAGCCACCCGGAC----
-TTTTAGGTCCCTTTGTTGTGATGAATAAAAATATCAGTTTT----TCTTATATATGTGTGATGTGTTTTCTG----TAT
GTGTCTTGCTTGGGATGCATGTGACGTGAT---AACTATAAGAATTGAGTG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr3D_1476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGTTATATATCTTTGTGA
AGAAATATATCTTCATGTTGATTACTTAAACTACGTACAGATGATCATGTCATTAGGTAATACTGTATATTGTAGTGCAT
GATACAGTTAACAACCACATCTGAACGTGATATAGGTTTAA-GGGATCAACGCTTCAAGTGATGGGGATATCCGTTGAAG
AAGGTGAGTGGGCTATTGTTGGTGGGACAGGACAGTTCGCTATGGCGACTGGTGTCATCTACAAAAAGTTCCATGAACAA
AGGAGCGACGGTAACATCATAGAACTCACTGTCCATGGATTTTGTCCCATGCTGAAAGGTTCACAGGTGAGATGAATAAC
CAACATGTACA-------------------------------ACTACCTTTTGTCTTCACCTAAATCTTCATTAGTTTGT
GTCTGC----ATCCCTTTTATTCAAGAAAACATCACATAATTGTGTTATCATATTGTAGAGCCTTCCCACAAAGGTTGGA
CCATGGGGTGGAAATGGAGGCTCGGATAAAGACATCGTCAAGGCACCAAGACGTCTAGAGAGCATCACAGTTAGCAGGGG
CACTATCATTGATTCAATCAAATTTTCTTATGTCGACCAAGCTGGTCAGAAGCGCACTGTTGGACCCTGGGGAGGTTCTG
GAGGAAAACAAAATACGGTCAGTGGACTCTTTTAATGAAATTTTATGTGATTTTCTCAGTTTCATATGTAAGCAACA-AA
CACTTATTTATTCTTT----CACAATGCAGTTCGTACTCGGCACTTCTGAGTTTGTGAAGGAAGTTTCTGGAACATTCGG
CCTTTATGGCAGAGACAACCACAACATAATAACATCACTAAAATTTGTCACCAACGTGAAGACATACGGGCCTTTCGGAC
AAGCAAAGGGAACCACTTTCACCATACCTGT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr2D_1901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCTTTTATTCAAGAAAACATCACATAATTGTGTTATCATATTGTAGAGCCT-CCCACAAAGGTTGGA
CCATGGGGTGGAAATGGAGGCTCAGGTAAAGACATTATCGAGGCACCAAGACGTCTAGAGAGCATCACAGTTAGCAGCGG
CACTATTATTGATTCAATCAAATTTTCTTATGTCGACCAAGCTGGTCAGAAGCGCACTGTTGGGCCCTGTGGAGGTTCTG
GAGGTAAACAAAATACGATCAGTGGACTCTTTTAATGAAATTTTATGTGATTTTCTCAGTTTCATATTTAAGCAACA-AA
CACTTCTTTATTCTTT----CGCAATGCAGTTCGTACTCAGCACTTCCGAGTTTCTGAAGGAAGTTTCTGGAACATTCGC
CCTCTATGGCAGAGACAACCACAACATAATAACATCACTGAAATTTGTCACACACGTGAAGTCATACGGGCCTTTCGGAC
AAGCGAAGGGAACCACTTTCACCATACCCGTGCAAAAGACTAGCAGCATCGTGGGCTTCTTTGGACGTAGCGGGATATAT
CTCGACGCGCTTGCTGTCTATGTGCACCATCTCTAAGCTACTAGCTAGCGGCTAATGCTCTTATTTTC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----S--S---S--S---
S--S-------------S-------S-S--S----S--------------SSS----S-----------------S----
--SS--S--S-------------S-S---S--S------S------------SS--S---S--S----S-----------
------SS-----S------------------------------------------------------------------
S----S--S---SSS--SSS-----------------S-----------S------------------S---SS--SSS-
------S-S--------S------------------S----S--------------------S-----------------
-----------------------------------------------------------------------S--S-----
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------------
----------------------S---------------------------------------------------------
-------------------------------------------S-----------------S------------------
-------------------------------------------------S------------------------------
------------------------------------------------------S-------------------------
-------S--S-----------------S------------S-----------S----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS--S-------------SSSSSSSSSSSSSSSSSSSSS-------------S---------S--------
-------------------------------------------------------------S------------------
------------S-------------------------------------------------------------------
-------------------------S------------------------------------------------------
-----------------------------------------------S--------------------------------
----------S---------S---------------SS-S------------S------------S---SS----S----
-S----S-----------S------S-----------------------------------------------------S
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
---------SS----------------S-----------S---S--S------------------S--------------
----------------SSSS------------------------------------------------------------
----------SS--------------------S-----------------------------------------------
-------S-----------------------------S------------------------------------------
-------------------------S---S-------------SS-----------------------------------
---S----------------------------------------------S-----------------------------
------------------------------------------SSSS-------------S---------S----------
--------S------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_474
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TTTCCACATACGTGTCCGCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2171
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GAACACGGTTCGATCTCCGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTGATTTGCTTGCCGGTGAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CACTCCAGCATGGCTAGGAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
