>input_sequence_50398
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----------------------------------------ATGGCACGGACGGCTCCGGTCGCCGACACCGACACCATCG
CCGTCCTCGGCGGCGACCTCCTGCGGGAGGTCTTCCTCCACCTCCCCACCCCCGCCGACCTCCTCCGTGCGGCGCTCGCC
TGCAAGCCCTTCCTCCACGCCGCCCGCAGCGCCCGCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTTCGCCTGCCCGCT
CCTCCTCGGCTGCTTCGTCCACCGCCCCAGTGAAGACCGCTGCCGCGAAGACCCCAGCCCTCTCCTTCTCCTCGCCCCCC
TTCCCGCCGCCGCGCGCCGCGTCGTCGAGGCCGGCGACTTCGCGCTCTCCTTCCTGCCCGACCGCGGCTCGTCGGGCCCC
GACCCGTGGAGGGTCTTGGACAGCCGCAGCGGCCGGCCTCTGCTGTGGGATCGGGCGTCCGCGGAGCAGCCCGTCGCCGA
TCCGTGGAAGGTCTTGGACTGCCGCAACGGCCGCCTCCTGCTGCGCAATCGGGTGTCCCGAGAGCTGGCCGTCGCCGATC
CCCTGACCCGGCGCTGGGCCTCTCTCCCCGCGCCCCCGGCTGAGCGCCCCGTGGGGTACGGCCTCGTCACCGACGACGGC
TGCTCGTCGGCGTTCCAGGCGTTCTGCCTTTCAGAAGACGGCGGCGGCTCCCCCGGGCTTCGCGCCCTGGTCCTCTCCTC
CAGCGAGCTCCGCTGGGCCGACGCCGCTGTCCTCGCGGGCCAGTATAATCTCGAGGACTCCCGGGTGATGCAAGCCAACG
GGTCGCTGTACTGGAAGCTCAAGGGCGGGGAGCGCATGGTTGCGCTCAACACGGAGACGATGGAGTTCTCCTTGCTGGAG
CTCCCTGATTTCGCTCGGCAGTTCAGCTTCGATGTCATTGAGAAGGGGGACGATGATGCTGGCGGGCTCTACCTGCTCAC
CATGCTCGGATGCTGCATCGAGGTTTGGGGCGGCTGGGATGATGGCAGCGGTGTGCTAACATGGACACTGGTGGACAAGT
CGGTGAAGTTCCAGAGGGCCATGGCGGACATGATTGGTTCACCACAGTTTTACCGGCATGGGCTGGTTGTCATTGGGGTG
GTTGCGGGTGTGGTCTTCTTGCGCAATAAGGATCGCCTGCTCTCCATTGATTTGGAAACTATGAAGCTCAGGATGTTGGC
TCAGAAAGACACGTGCCCATCGGCCCTGATGTATCCTTACACGATGGCGTGGCCGCCTTCATGCCTGAACCCTACTGAAG
AAGGTGCTTGATAAGATGGTAGCCCTACTATGCAAGTTTTGGCCAACAATCTGATCATAAG---------AAATATTTGA
ACCAAACGATACAGTTTATAACTTCTTAACAATTTCTTAGTTGCTTTAGCTTTTGCGGGCATAAAAAGAACATGCTGCTT
GACACTCCAAAACTTA---CTTCGTTAGCATCGTGCTGGGGTG-AATCTTCTGACATGCTGAATACCCTGATTCTGCTGC
AGGAATGTGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>chr1D_1_TraesCS1D01G092600
CGCGTCGGACTCGGTCAACCCCATTTTGAGGAATTGGTTGTTGAATCGGCGTCGGCGGCAAGCGGACCTCTGCTCGGTGG
TCCTGGACCGATCCTCGACTCAGGCCAACGTGAGGTCTGGTCGGACGTAGCAAACGCCGCCCGACACGCCGCATTGTGAT
TCTCCCAACGAGGCAGCCGCGACCTCGGCTAGCTCCAACCATCGAGCCTTCTCACGTCGACGCACACTGCCACACCCGTA
TCCAGGACGACGGCAACAACGCACGACCGCAGGCCCCGCTCCAACCCGAATCGGGCTTGAGCGCCCATACCCACCACCGT
GCGGCCCCTACATGCATTTCGCGCTGCCACACACCAACGCCACCAACATGCCGAGAGATCCCACCCCACCACCGCGCGCG
AGTATGAGAAAGCGACCACCAGAAAAATGCATCCCCCTTCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTACTGTAGTACGTATTTTCCATTCCT
CTTCTTCTTCATGAAAAGGCATAACGAACGGTTGCTCAAAAAAGCTAGAAAAAAGCAAGGCCTTCCATAAAACTGGAGGG
GTTATATTACAAGATTGCCATTGAGCAACACGTCCCACGCGTCGAAACCACCTCGGCTTGAGACTTGAGAGTGAGGCCCC
GTCGATTGCTCGCATTCCGACCCCCATTCTGCGCCGCCACATGGCACGGACGGCTCCGGTCGCCGACACCGACACCATCG
CCGTCCTCGGCGGCGACCTCCTGCGGGAGGTCTTCCTCCACCTCCCCACCCCCGCCGACCTCCTCCGTGCGGCGCTCGCC
TGCAAGCCCTTCCTCCACGCCGCCCGCAGCGCCCGCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTTCGCCTGCCCGCT
CCTCCTCGGCTGCTTCGTCCACCGCCCCAGTGAAGACCGCTGCCGCGAAGACCCCAGCCCTCTCCTTCTCCTCGCCCCCC
TTCCCGCCGCCGCGCGCCGCGTCGTCGAGGCCGGCGACTTCGCGCTCTCCTTCCTGCCCGACCGCGGCTCGTCGGGCCCC
GACCCGTGGAGGGTCTTGGACAGCCGCAGCGGCCGGCCTCTGCTGTGGGATCGGGCGTCCGCGGAGCAGCCCGTCGCCGA
TCCGTGGAAGGTCTTGGACTGCCGCAACGGCCGCCTCCTGCTGCGCAATCGGGTGTCCCGAGAGCTGGCCGTCGCCGATC
CCCTGACCCGGCGCTGGGCCTCTCTCCCCGCGCCCCCGGCTGAGCGCCCCGTGGGGTACGGCCTCGTCACCGACGACGGC
TGCTCGTCGGCGTTCCAGGCGTTCTGCCTTTCAGAAGACGGCGGCGGCTCCCCCGGGCTTCGCGCCCTGGTCCTCTCCTC
CAGCGAGCTCCGCTGGGCCGACGCCGCTGTCCTCGCGGGCCAGTATAATCTCGAGGACTCCCGGGTGATGCAAGCCAACG
GGTCGCTGTACTGGAAGCTCAAGGGCGGGGAGCGCATGGTTGCGCTCAACACGGAGACGATGGAGTTCTCCTTGCTGGAG
CTCCCTGATTTCGCTCGGCAGTTCAGCTTCGATGTCATTGAGAAGGGGGACGATGATGCTGGCGGGCTCTACCTGCTCAC
CATGCTCGGATGCTGCATCGAGGTTTGGGGCGGCTGGGATGATGGCAGCGGTGTGCTAACATGGACACTGGTGGACAAGT
CGGTGAAGTTCCAGAGGGCCATGGCGGACATGATTGGTTCACCACAGTTTTACCGGCATGGGCTGGTTGTCATTGGGGTG
GTTGCGGGTGTGGTCTTCTTGCGCAATAAGGATCGCCTGCTCTCCATTGATTTGGAAACTATGAAGCTCAGGATGTTGGC
TCAGAAAGACACGTGCCCATCGGCCCTGATGTATCCTTACACGATGGCGTGGCCGCCTTCATGCCTGAACCCTACTGAAG
AAGGTGCTTGATAAGATGGTAGCCCTACTATGCAAGTTTTGGCCAACAATCTGATCATAAG---------AAATATTTGA
ACCAAACGATACAGTTTATAACTTCTTAACAATTTCTTAGTTGCTTTAGCTTTTGCGGGCATAAAAAGAACATGCTGCTT
GACACTCCAAAACTTA---CTTCGTTAGCATCGTGCTGGGGTG-AATCTTCTGACATGCTGAATACCCTGATTCTGCTGC
AGGAATGTGAGGCTCACTACAGCTTATGATGTTAATAAGGTTTTGTGCAGAGGTAACGAAGAGGAAGGAATTCGATCATC
CATACGATGATTGCGGCGCAACCAGTCTAACCGCGCCTAAATGCCTGAACCTCGTATGATGTAATTAGTTAGTGT-TACG
GTCTTG---TTATGTGTGTGGTCACC--ATAATCCGACTTTGCAATCTGGGGAATGCGGTATGTAGCATGCTTCCTTCCT
GATTG-----TTGTACCAGTTCATCTGTCTGACTGTCTCCTCAAA--TGTGTGATACAATCCTGGTTGGGGTTGGAGTGT
ATCTATCATCCTGTCTCCTTCGATACAGATGCATGGATTGTATCCCAGTCTAATAAATGGGCTTCCAGAATCATGCACAG
GGAAGAAACTGAAGAGTGAAG-AGAGCTAGCTTGGCTATGGCAGCGAGTGCTGTGA--------CTACGTTAGATGTTGA
TAAATAGTTCC---ATCAGTGTGTGTTTGAGCATTCTTATCTAACCTCTGAAGAATTTATGAGATGCACCACGGATGGAG
ACATCAGCCTCAGGTTTTGGGGCCTGTTTCCTCACTTCGTCTGGGTCC-----AAGGTTTTGTAAGCAAGTAAACTCTGG
TTTCACAGAGGCAGGCTATCCTGGTCTTCCTAATTTTCCATAATGTATGCATATGAGTGGACTTGTGCAACTTCAATGGC
AAGCGTCAATTTCTGATGT-------------------------------------------------------------
-------------------------------------------TCAGACATGCTTTGCCTCTGACGGTGCAGTTTT----
-------------------------------------TGTTCAAGCCTCTGCGGGCCTTCACATGTTACTGTCAAAGTGA
TCATCCTTTCACTGTGCCCATACATTCAGAAAAGACACAGGGATATATCATCACAATTGATGTTGTTGAATTTTCTTTTT
GACAGCAGCAATTGCTTGTTGATACCCATTAGGCGTTGAATAATGAAAGAGAACGCAAGTCAACAAGCTTTCAAGGAAGT
ACTGATCAGGCCTTCGGATTGATCTCCAAGACGACTTGTAAAACGTGGACGCCACGAACTCGAAC
>chr1A_873
--------------------------------------------------------------------------------
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------------------------------------------------------------------------CTGGAGGG
GTTATATTACAAGATTGCCATTGAGCAACACGTCCCACGCGTCGAAAGTCGAAACTACCTCGGCCTGAGAGTGAGGCCCC
GTCGATTGCTCGCATTCCGATCCCCATTCTGCGCCGCCACATGGCACGGACGGCTCCGGTCGCCGACGCCGACACCATCG
CTGTCCTCGGCGGCGACCTCCTGCGGGAGGTCTTCCTCCACCTCCCCACCCCTGCCGACCTCCTCCGCGCGGCGCTCGCC
TGCAAGCCCTTCATCCACGCCGCCCGCAGCGCCCGCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTCCGCCTGCCCGCT
CCTCCTCGGCTGCTTCGTCCACCGCCCCAGTGAGGACCGCTGCCGCGAAGACCCCAGCCCTCTCCTTCTCCCCGCCCCCC
TTCCCGCCGCCGCGCGCCGCGTCGTCGAGGGCGGCGACTTCGCGCTCTCCTTTCTGCCCGACCGCGGCTCGTCGGGCCCC
GACCCGTGGAGGGTCTTGGACAGCCGCAGCGGCCGGCCCCTGCTGTGGGATCGGGCGTCCGCGGAGCAGCCCGTCGCCGA
TCCGTGGAAGGTCTTGGACTGCCGCAACGGCCGCCTCCTGCTGCGCAATCGGGTGTCCGGAGAGCTGGCCGTCGCCGATC
CCTTGACCCGGCGCTGGGCCTCTCTCCCCGCGCCCCCGGCTGAGCGCCCCGTGGGGTACGGCCTCGTCACCGACGACGGC
TGCTCGTCGGTGTTCCAGGCGTTCTGCCTTTCAGAAGACGGCGGGGGCTCCTCCGGGCTCCGCGCCCTGGTCCTCTCCTC
CAGCGAGCTCCGATGGGCCGACGCCGCTGTCCTCGCGGGCCAGTACAATCTCGAGGACTCCCGGGTGATGCAAGCCAACG
GGTCGCTTTACTGGAAGCTCAAGGGCGGGGAGCGCATGGTTGCGCTCAACACGGCGACGATGGCGTTCTCCTTGCTGGAG
CTCCCGGATTTCGCGCGGCAGTTCAGCTTCGATGTCATTGAGAAGGGGGACGACGATGCTGGCGGGCTCTACCTGCTCAC
CATGCTCGGATGCTGCATCGAGGTATGGGGCGGCTGGGATGATGGCAGCGGTGTGCTAACATGGACACTGGTGGACAAGT
CGGTGAGGTTCCAAAGGGCCATGGCGGAGATGATTGGTTCACCACAGTTTTACCGGCATGGGCTGGTTGTCATTGCGGTG
GTTGCCGGTGTGGTCTTCTTGCGCAATAAGGATCGCCTGCTCTCCATTGATTTGGAAACTATGAAGCTGAGGATGTTGGT
TCGGAAAGACGAGTGCCCATCGGCCCTGATGTATCCTTACACGATGGCGTGGCCGCCTTCATGCTTGAACCCTACTGAAC
AAGGTGCTGGATAAGATGGTACCCCTACT-TGCAAGTTTTGGCCAACAATCTGATTATTATAC-----ATAAATATTTGA
ACCAAACAATTCAGTTTATAACTT---AACATTTTCTTCTTGGCTTTAGCTTTTGTGGAGATAAAAAGAGCATGCTGATC
-ACACTCCAAAACTTATTACTTTGTTCGCATCTTGGTTGGGTTAAATCTTCTGATACGCTGAATACCCTGATTCTGCTGC
AGAAATGTGAGGCTCACTACATCTTATGATGATAATAAGGTTTTGTGCAGAGGTAACGAAGAGGAAGGAATTCAATCATC
CATACGATGGTTGCGGCGCAACCAGTTGT-----GCCTAAATGTCTGAACCTCGTACGATGTAATTAGTTACTTTTATGT
TCTTGGTGTGTGTTTGTGTGGTCACTCTATAATCCGACTTCGTAATCTGGGGAATGCAGTATGTAGCACGCTTCCTTCCT
GACTGTTGTATTGTACCAGTTCATCTGTCT--------CCTCAAATTTGTGTGATACAATCCTAGTCGAGGTTGGAGTG-
-----------TGTCTCCTTCGATACAGATGCATGGATTATATCTCAGTGTAATAAATGGGCTTACAGAATCATGCACAG
GTAATAAACTGAAGACTGAAG-AG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>chr1B_883
--------------------------------------------------------------------------------
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--TATATTACAAGGTTGCCATTCAGCAACACGTCCCACGCGTCGAAACCACCTCGGCTTGAGA-------GTGAGGCCCC
GTCGATTGCTCGCATTCCGATCCCCATTCTGCGCCCCCACATGGCACGGACGGCTCCGGTCGCCGAC------ACCATCG
CCGTCCTCGGCGACGACCTCCTGCGGGAGGTCTTCCTCCATCTCCCCACCCCCGCCGACCTCCTCCGCGCCGCCCTCGCC
TGCAAGCCCTTCCTCCACGCCGCCCGCAGCGCCCGCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTTCGCCTGCCCGCT
CCTCCTCGGCTGCTTCGTCCACCGC---------------TGCCGCGAAGACCCCAGCCCTCTCCTTCTCCCCGCCCCCC
TTCCCGCCGCCGCGCGCCGCGTCGTCGAGGGCGGCGACTTCGCGCTCTCCTTCCTGCCCGACCTCGGCTCGTCGGGCCCC
GACCCGTGGAAGGTCTTGGACAGTCGCAGCGGCTGGCCCCTGCTGTGGGACCGGGCGTCCGCGGAGCAGCCCGTCGCCGA
TCCGTGGAAGGTCTTGGACTGCCGCAACGGCCGCCTACTGCTGCGCAATCGGGTGTCCCGAGAGCTGGCCGTCGCCGATC
CCCTGACCAGGCGCTGGGTCTCTCTCCCCGCGCCCCTGGCCGAGCGCCCCGTGGGGTACGGCCTCGTCACCGACGACGGT
TGCTCGTCGGCGTTCCAGGCGTTCTGCGTTTCAGAAGACGGCGGCGGCTCCTCCGGGCTCCGCGCCCAGGTGCTCTCCTC
CAGCGAGCTCCGCTGGGCCGACGCTGCTGTCCTCGCGGGCCAGCATACTCTCGCGGACTCTCGGGTGATGCAAGCGAACG
GGTCGCTCTACTGGAAGCTCAAGGGCGGGGAGCGCATGGTCGCACTCAACACGGCGACGATGGCGTTCTCCTTGCTGGAG
CTCCCTGATTTCGCGCGGCAGTTCAGCTTCGACGTCATTGAGAAGGGGGACGACGATGCTGGCGGGCTCTACCTACTCAC
TATGCTCGGATTCTGCGTCGAGGTTTGGGGCGGCTGGGATGATGGCAGCGGTGTGCTAACATGGACACTGGTGGAGAAGT
CGGTCAGGTTCCAGAGGGCCATGGCGGAGATGATTCGTTCATCACAGTTTTTCCGGCATGGACTAGTTGTCATTGGGGTG
GTTGCCGGTGTGGTCTTCTTGCGCAATAAGGATCGCCTGCTCTCCATTGATCTGGAAACAATGAAGCTCAGGCTGTTGGC
TCGGAAAGACAAGTGCCCATCGACCCTGATGTATCCTTACACGATGGCATGGCCACCTTCATGCCTGAACCCTACTGAAC
AAGGTGCTTGATAAGATGGTAGCCCTACT-TGCAAGTTTTGGCCAACAATCTGATTATTATACTGTACATAGATATTTGA
ACCAAACAAGT-AGTTTATAA---CTTAACATTTTCTTAGTGGCTTTAGCTTTTGCGGACATACAAAGAACATGCTGCTT
TACACTCCAAAACTTA---CTTTGCTCGCATCTTGGTTGGGTGAAATCTTCTGATATGCTGAATACCCTGATTTTGCTGC
AGGAATGTGAGGCTCACTACAGCTTATGATGATAAGAAGGTTTTGTGCAGAGGTAACGAAGACGAAGGAATTCAATCATC
CATACGATGGTTGCGGCGCAACCAGTCTAACCGCGCCTGAACGTCTGAACCTCATATGATGTAATTAGTTAAGTCCTACG
GTCTTG---GTATGTGTGTGGTCACTATATAACCCGACTTTGTAATCTGGGGAATGCAGTATGTAGGACGCTTCCTTGCT
GATTGT----TTGTACCAGTTCATCTGTCTGACTGTCTCCTCAAATATGTGTGATACAATCCTGGCTGGGGTTGGACTGT
ATCTATCAT-CTGTCTCCTTCGATACAGATGCATGGATTGTATCTCAGTCTAATAAATGGGCTTCGAGAATCATGCACAG
GGCATAAACTGAAGAAGACTGAAGAGATAGCCTGGCTATGGCAGCGAGTGCTGTGAGCCTGTGACTACGGTTAAGGTTGA
TAAATAGTTCTACTATCAGTTTGTGTTTGAGCCATCTTATCTAACCTCTGAAGAATTCCGGAGATGCGCCACAGATGGGG
CCATCTGCCTCAGAATTTGGCGCCTTTTTCCTCAGTGTATCTTGGTCGAGGTTAAGGTTTTGTAGGCAAGTAAACTCTGG
TTTCACAGAGACGGGTTATCCCTGTCTTCCTAATTTCCTATCATGTATGCATATGGACTTGCAACTACTGCCTCCGATTC
TAAATATAAGTCTTTAGAGATTCCAGTATGAACTACATACGGAGCAAAATGAATGAATCTACACTCTAAAATATGTCTCT
ACAAAGACTTATGTTTAGAAACGGAGGGAGTACAATGCAAGTGTCAGACATGCTTTCCCTCTGACGGTGCAGTTTTGTTC
AAGTGTCAGACATGCTTTCCCTCTGACGGTGCAGTTTTGTTCAAGCGTCT--GGGCCTTGACATGTTACTATGAAAGTGA
TCATCCTTCCACCGTGCCCATACATTCAGAAAAGACACAGGGATG--TCATCACAATTGATGTTGATT-------TTTTT
TACAGCAACAATTGCTGTTGTTA---------------------------------------------------------
-----------------------------------------------------------------
>chr1D_1442
--------------------------------------------------------------------------------
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-CCGTGGCAGCTCCTCGACTGCCGCAACGGCCGCCTCCTGCTGCGCAGCAGGTCGTCCCAGGAGCTCGTCGTCGCCGACC
CGCTGGCCCGGCGCTGGGTCTCGCTCCCCGCGCTCCCCGGCGACCACCCCGTGGGCTACGGCCTCGTCGCCGACGACGGC
GACTACTCGGTGTTCCAGGCCGCCTGCATTTCCCGAGTCGGCGACA---CCACCGAGTTGCGCGCCTTCCTCCTCTCCTC
CGCCGAGCTCCGGTGGGCGGACGTGGGCGGCCTCGCGCAGCAGCCCAATCTCGCGGCCTCCCGGGCGATGCAAGCCAACC
AGTCGCTGTACTGGACGCTAGTGGGTGGACAGCACATGCTGGCGCTCAACACGGCGACGACGGAGCTCGTCGTGCTGCCG
CTCCCGCCTTTCCTGCGGGAGCTCGGTTTCGACGTCATCGAGAAGGGGGAGGACGTCGCCGGCGGGCTCCATGTGCTCAC
CATGCGTGGCTTCTGCATCGAGGTTTGGGTCGGCGAGGACGACGGCGCCGGTGGCCTGGCGTGGACGCTGCTGGACAAGT
CGGTGAGGTTCCACAGGGCGATTGCAGAGATGATTGGCTCGGAACACTTTTACCATCTCACACTGGATGTCATCGGGGTG
GCTGCCGGTGTTGTGTTCTTGCGCAATGGCAGTTGTCTGTTCTGCATTCATCTTGAGACTATGAAGATGACGAAGCTCTC
TGAGAACGAGAGTTGCCCGTCTGCGCTGATATATCCTTACACGATAGCGTGGCCGCCAGTGTTCTTGAACCCTACTGAAG
AAGGTGCTTGATAAGGTGATA-----------------------------------------------------------
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>chr1B_1442
--------------------------------------------------------------------------------
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-CCGTGGCAGCTCCTCGACTGCCGCAACGGTCGCCTCCTTCTGCGCAGCCGCTCGTCCCAGGAGCTCGCCGTCGCCGACC
CGCTGGCCCGGCGGTGGGTCTCGCTCCCCGCGCTCCCCGGCGATCACCCCGTGGGGTATGCCCTCGTCCCCGACGACGGC
GACTATTCGGTGTTCCAGGCGGCCTGCATTTCCCGAGTCGGCGACA---CCACGGAGCTGCGCGCCTTCCTCCTCTCCTC
CGCCGAGCTTCGGTGGGCGGACGTGGGCGGCCTCGCGCAGCAGCCCAATCTCGCGGCCTCCCGGGCGATGCAAGCGAACC
GGTCGCTGTACTGGAAGCTAGTGGGTGGACAGCACATGCTGGCGCTCAACACGGCGACGACGGAGCTCGCCGTGCTGCCG
CTCCCGCCTTTCCTGCGGGAGCTCAGTTTCGACGTCATCGAGAAGGGGGAGGACGGCGCCGGTGGGCTCCATGTGCTCAC
CATGCGTGGCTTCTGCATCGAGGTTTGGGTCGGCGAGGACGACGGCGCCGGTGGCCTGGCGTGGACGCTGGTGGACAAGT
CGGTGAGGTTCCACAGGGCGATTGCAGAGATGATTGGCTCGGAACACTTTTACCATCTCACACTGGATGTCATCGGGGTG
GCTGCGGGTGTTGTGTTCTTGCGCAATGGCAGTTGTCTGTTCTGCATTCATCTTGAGACTATGAAGATGACGAAGCTCTC
TGAGAACGAGAGTTGCCCGTCTGCACTGATATATCCTTACACGATAGCGTGGCCGCCAGCGATCTTGAACCCTACTGAAG
AAGGTGCTTGATAAGGTGATA-----------------------------------------------------------
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-----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
----------------------------------------------------------------S---------------
--------------------S----------------------------------------------S------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
---------------------------------S-------------------------------------S--------
------------------------------S-------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------S--------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------S--------------------------------------S--------------------------
--------------------------------------------------------------------------------
------S---------------------S---------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------------------------S-------------------------S--S-S-------------------
-------S--S--------------------S---------S----------------S---------------------
S---------------------S---S-----S--S-S----------------S-------------------------
-------------------------------S-----------------------------------------S------
---------S---------------------------------S---------------------------S-S------
---------S---------------S----------------S--------------S----------S-----------
--------------------------------------------------------------------------------
---------S----------------------------------S-----------------------------------
----S----------S----------S----S-------------------------------------S-SS-S-----
----------S---------S-----------SS-----------------------SSS-------S----S-----S-
S----S-------SS-----S----S--------S-SSS---S----S----------------S---------------
----------S-S--S-----SS-------------S-S--S-------------SSSSSS-SSS-S-SS-S--SSSSS-
S-SSSSS--S-SS-S-SSS-------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------------------------------------S---SS-------S----------S-S-------
--------S---S-------------------------------SSS------------------S-SSSSSSSS-----
S------S--------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGTGAT
TCTCCCAACGAGGC------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_1855
--------------------------------------------------------------------------------
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--------------TCGGCAGTTCAGCTTCGATG----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_837
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GGCATAACGAACGGTTGCTC-------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------GTGCTGGGGTGAATCTTCTGA---------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_2007
--------------------------------------------------------------------------------
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-------------------------------------------------------------------CTGGTGGACAAGT
CGGTGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_3019
--------------------------------------------------------------------------------
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----------------------------------------------------------ATGAGATGCACCACGGATGG--
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
