>input_sequence_50356
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----------------------------------------ATGGGCTTTTCACCGCATGCGAAGCATTTCCTAGGCATTG
TTATCTTGTTGCTTGCATGCACCATCGTCCACAACGCGACAGAGCTGAGTCTTCCCATGCCGCTCCTGCGCTGGTTTCAC
GATTTCCCATACACCCACCACCTCCTCCTGATGGGTCTTCTTCCCGCCACCGTGGCCGCCATATTCCTGACCATGAAGTT
GCGTCCCTGTACCGCATACCTCATCGACTATGCTTGCTTTAAGGGTAGTACCAACTGCCGCGTCCCGATTTCCACCTTCA
TCGAGCATATGCACCTGACACCGTTCTTGGACGGTCGCAGCATCAAGTTCATGACGCGTTTGCTGGAACGCAGTGGCATC
GGCAACGAGTCGAACCTGCCC-CCCACTATCCACTACATCCCCGTGTACCGAAGCTTGATGGAAGCCCGTGCTGAAGCAG
AGCTGGTCGTCTTCTCTGCCATTGACGACCTGTTCGCGAAGACTGGCGCCGCCCCTGACGCCGTGAGCATACTCGTCGTC
AACTGCAGCGTATTCGCCCCAGTGCCGTCCATCAGCGACATGATCGTGAGCAGATACAAGCTCCACCATGACATCCGCTG
CCTAAACCTATCAGGCATGGGGTGTAGCGCGGGTGTGACGGCGGTGGGCCTCGCGACCAGGCTACTGCAGGCGACGCGGC
GGCAACATGGTGCGCAGTTCGCTATGGTCGTCTCCACGGAAACGCTCACCTCCAACTTCTACGAGGGCAAGGAGCGGCCC
ATGCAGCTGTCCAACATGCTATTCCGCGTGGGCGGCGCTGCCGCGCTCCTGTCCACGTCCAAGGAAAAGGCGCGGTTCCG
TCTCAGGCACTTCGTGCGAACCATCACGGGTGCCGCAAGTGATGCCGCCTACAAGTGTATCTTCCAGGAGGAGGATGCCG
AGGGACACTTAGGGATGAACCTGTCCAAGGACCTCCCGGCCGTCGCGGCCGACGCTCTAAAGGCCAACATCACTGCCATC
GGCCCCCTCATCCTGCCACTCGCCGAGCAGCTGCTCTTTGCATTACATGCAGCAGCGTCTTTCGTATGGAGCAAGCTGCC
CATCGACACCAAGCGGGTCTTCAGTCCGTACGTCCCGGATTTCCGCAAGGCTTTCGATCACTTCTGCATCCACACAGGGG
GCCCTACGGCGATCGATGGTGTACAGCGCATCCTCGAGCTATCGGACGAACACGTGGAGCCAGCGCGCATGACCCTTTAC
AGGTTTGGGAACACATCAAGCAGCTCAGTGTGGTACGAGCTGGCGTACGTCGAGGCCAAGGGCCGGATGTCCAAGGCTGA
TCGTGTTTGGATGATTGGGTTTGGGTCCGGGTTTGAGTGCGTTAGCGCTGTCTGGGAGTGCATTCGGCCGGCGGACGACC
CGGACAAAGCATGGGCTGAGTGCATACATCGATACCCGGCCGGTGAGCATTCCCGTGCGCCGGAGATCATCGAATGCTAG
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>chr4D_1_TraesCS4D01G008200
CACTCTTTGGTGAGGTAGCATCCAAGTTCCATCCATATCCATATCTATCTCATAGAGGAGTGAGTTCACCTCGATTTCGT
TGGCACGTGCGTGAGCTCTTGTCATAGGTCCACGTGGTGCTTGATGAGTTGGTGTAGAGTCCATGAGGATGACCGAAGGA
TGCTCCACATCATATTACCTCTTGTTTTTACACTTACCCTACAACAAATGCCTACCTCCTTTAATTACTTGAACACATTT
TGTGAGCTTGTGGACAGAGAGCGTTCGTACGTGGACACACAAGGCACGCATTAAAAAAAGGGGTGGGTGGAAGTTGGCTG
TATGTATTCATTAATTACCGTGCAAATTTGAATTTCAATTATAGTATTTTTTTCAAAATTTTCAATTATAGTACTTCCTC
TATTTTTATATACAAGGTCACAAACTTAGATTACAGATATGTAGCTAAAAATTTAATGACTAGATTGCAAGCTAGCATTT
TTTTCAGTTACTGGATCATTAATACGTTACATGCATGCAAGGAAGGAATAGAAAAATGAGTGGATGTTGAGTGAGTAAGT
ATTAAACATGTTGCTAGTATGAGGAAATACAAAAATGCTAAACCTACGAAAGAGCCCCCCCCCCCTCCCCCGTGATTTAC
AGGGAGTTGGGCCCCTCACTCCTCTAAACACGAAACCTATTCTTTCACGTTGGCCAATACGTAAACTTAAGTAGTTCCTT
TACGTAAGTGTACCATTGCCAGAGAAAATATCATTAATTTTTGCCTCGATTAGTGTTGATGGTCATGTATCGATGTAAAA
TGTATTTTTCATAGTGCCTTGTATAAGTAAATGGAGGGAGTATGGATTCCTTCACGCAACCTACATAAGTTTTACGATAA
ATTTCCAATAAAATCTCCATAAATTCCCAATAAAATTCTCCACGCCGCATCGCGTCTATAAATAACACCTCCGGCTGGTC
AGAGAACTTGGAGCTTTGGACTGGCTAGCTGTTAAACACCATGGGCTTTTCACCGCATGCGAAGCATTTCCTAGGCATTG
TTATCTTGTTGCTTGCATGCACCATCGTCCACAACGCGACAGAGCTGAGTCTTCCCATGCCGCTCCTGCGCTGGTTTCAC
GATTTCCCATACACCCACCACCTCCTCCTGATGGGTCTTCTTCCCGCCACCGTGGCCGCCATATTCCTGACCATGAAGTT
GCGTCCCTGTACCGCATACCTCATCGACTATGCTTGCTTTAAGGGTAGTACCAACTGCCGCGTCCCGATTTCCACCTTCA
TCGAGCATATGCACCTGACACCGTTCTTGGACGGTCGCAGCATCAAGTTCATGACGCGTTTGCTGGAACGCAGTGGCATC
GGCAACGAGTCGAACCTGCCC-CCCACTATCCACTACATCCCCGTGTACCGAAGCTTGATGGAAGCCCGTGCTGAAGCAG
AGCTGGTCGTCTTCTCTGCCATTGACGACCTGTTCGCGAAGACTGGCGCCGCCCCTGACGCCGTGAGCATACTCGTCGTC
AACTGCAGCGTATTCGCCCCAGTGCCGTCCATCAGCGACATGATCGTGAGCAGATACAAGCTCCACCATGACATCCGCTG
CCTAAACCTATCAGGCATGGGGTGTAGCGCGGGTGTGACGGCGGTGGGCCTCGCGACCAGGCTACTGCAGGCGACGCGGC
GGCAACATGGTGCGCAGTTCGCTATGGTCGTCTCCACGGAAACGCTCACCTCCAACTTCTACGAGGGCAAGGAGCGGCCC
ATGCAGCTGTCCAACATGCTATTCCGCGTGGGCGGCGCTGCCGCGCTCCTGTCCACGTCCAAGGAAAAGGCGCGGTTCCG
TCTCAGGCACTTCGTGCGAACCATCACGGGTGCCGCAAGTGATGCCGCCTACAAGTGTATCTTCCAGGAGGAGGATGCCG
AGGGACACTTAGGGATGAACCTGTCCAAGGACCTCCCGGCCGTCGCGGCCGACGCTCTAAAGGCCAACATCACTGCCATC
GGCCCCCTCATCCTGCCACTCGCCGAGCAGCTGCTCTTTGCATTACATGCAGCAGCGTCTTTCGTATGGAGCAAGCTGCC
CATCGACACCAAGCGGGTCTTCAGTCCGTACGTCCCGGATTTCCGCAAGGCTTTCGATCACTTCTGCATCCACACAGGGG
GCCCTACGGCGATCGATGGTGTACAGCGCATCCTCGAGCTATCGGACGAACACGTGGAGCCAGCGCGCATGACCCTTTAC
AGGTTTGGGAACACATCAAGCAGCTCAGTGTGGTACGAGCTGGCGTACGTCGAGGCCAAGGGCCGGATGTCCAAGGCTGA
TCGTGTTTGGATGATTGGGTTTGGGTCCGGGTTTGAGTGCGTTAGCGCTGTCTGGGAGTGCATTCGGCCGGCGGACGACC
CGGACAAAGCATGGGCTGAGTGCATACATCGATACCCGGCCGGTGAGCATTCCCGTGCGCCGGAGATCATCGAATGCTAG
CTAGCGCGCTCAACCACGAACGTAACCCCAGCGTTGTGCAGTGCGCATTATACTCCCTTCGTTTCAAAATAAATGTCAAG
GTTTCAGTTCAAATACTCACTCGGTTTCAAAATAAGTGTTGTAATTTTAGTTCAAGTTTGAACCGAAAGCACAAAACTTA
TTTTGAAATGAAATTAGAACTGAAACCAGGACACATATTTTAGAACGGAGGGAGTATACTAATAGGGTGTACGTGGAGCA
ATAATCATTGTGTATGCCAGTGCAGTGTGTGTTATAATTAAGCTCAAGGGCTTAGATGTCTGGATATTTTATGCATGCAT
GTATACTACTTCCTCAATGATTATTAGTGCAGCTGCACTAATTGGATGCATCGAGTGAACCGTCACGCGCACTCACTAGT
AGAAAAAGAGGTTTCCATACGCCCCCATTAGTCCCCAAAATAATCGAACCGCGATCAAAGGGGTCTTTAGTCGCGGTTCG
GTAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTA---------
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-----------------------------------------------------------------------GTCCCGGTT
GGCCTGGCCAACCGGGACTAAAGGTTCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACAAACCGGGACTAAAGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
TGTACTAAAGGGCCCATCAAACTCTA-CCCCCC---TGGACCGCCTTTTCAGTTTTAGAAAAATCAAAAGAAAATGATGG
AAATGTCAAAAAAGTAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACGAATTCGGATGAAAAAGTTT-
TTATATGAAAAATCATCTACTCGAAAAGTTACATCCGAATTTAAC
>chr7D_1209
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--------GTACCGTATACCTCGTCGACTATGCTTGCTTCCAGGGTATTGGCAGCTGTCGTATGCCAAGAGCCACGTTCA
TCGAGCATATTCACCTCAACCCATTGTTCGATGAGCACAGCGTCTCCTTCATGACGCGCATGCTCGAAAGCAGCGCCATC
GGCGAGGAGACCAGACTGCCCGCCGGCGACCTGTATATGCCGGCACAGAAT-AGCTTCCAGGAGGCCCGCGCCGAGGCGG
AGCTGGTCGTCTTCTCGGCCATCGACGACCTATTCGCCAAGACGGTGGTCACCGCAGACGCCATCGACATACTAGTAGTC
AACTGCAGCGTCTTCGCCCCAGTGCCGTCCATCAGCGACATGATCGTGAACAGATACAAGCTCCGTGATGACGTCCGCGC
CGTAAACCTTTCCGGTATGGGATGCAGCGCCGGCGTGATCTCGGCGGGTCTCGCGGCCGGCCTGCTGCAAGCAACGGGCC
ACGGCGCGA---CGCAGCACGCTCTGGTCGTCTCCACGGAGATCATCACTTGTAACTTCTACACCGGCAAGGAGAGGCCC
ATGCAGCTCTCCAACGTCCTGTTCCGGGTCGGCGGCGCGGCCGTGCTGCTGTCCACGTCCGAGGACAGGGCGCGGTTCCG
CCTCTCGCACCTCGTCCGCACGAGCACCACGGGCACGCACGACGGCTCCTACTCGTGCGTCTTCCAGGAAGAGGACGGCG
AGGGCAACTTAGGTGTCAACCTGTCCAAGGATCTACTGGCCGTCGCCGGCAACGCCCTGAAAGCCAACATCAGAGCCGTC
GCGCCCCTCGTGCTCCCTCTCTCGGAGCAGCTGCTCTTCGC---------------------------------------
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>chr7A_1212
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-----------CCGTATACCTCATCGACTATGCTTGCTTCCATGGTATTGGCAGCTGTCGTATGCCAAAAGCCACGTTCA
TCGAGCATATTCACCTCAACCCATTGTTCGATGACCACAGCGTCTCCTTCATGACGCGCATGCTCGAAAGCAGCGGCATC
GGCGAGGAGACCAGACTGCCC-CCGGCGACCTGTATATGCCGGCACAGAAT-AGCTTCCAGGAGGCCCGCGGCGAGGCGG
AGCTGGTCGTCTTCTCGGCCATCGACGACCTATTCGCCAAGACGGTGGTCACCGCAGACGCCATCGACATACTAGTAGTA
AACTGCAGCGTCTTCGCCCCAGTGCCGTCCATCAGCGACATGATCGTGAACAGATACAAGCTCCGTGATGACGTCCGCGC
CGTAAACCTTTCCGGTATGGGATGCAGCGCCGGCGTGATCTCGGTGGGTCTCGCGGCCGGCCTGCTGCAAGCAACGGGCC
ACGGCGCGA---CGAAGCACGCTCTGGTCGTCTCCACGGAGATCATCACTTGTAACTTCTACACCGGCAAGGAGAGGCCC
ATGCAGCTCTCCAACGTCCTGTTCCGGGTCGGCGGCGCGGCCGTGCTGCTGTCCACATCGGAGGACAGGGCGCGGTTCCG
CCTCGCGCACCTCGTCCGGACGAGCACCACGGGCACGCACGACAGCTCCTACTCGTGCGTCTTCCAGGAAGAGGACGGCG
AGGGCATCTTAGGTGTCAACCTGTCCAAGGATCTCCTGGCCGTCGCCGGCAACGCTCTCAAGGCCAACATCACAGCCGTC
GCGCCCCTCGTCCTCCCTCTCTCCGAGCAGCTGCTCTTCGC---------------------------------------
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>chr5D_2868
GCACTCG-------------------------------------------------------------------------
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-------------------------------------------------------------------------CACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTAGTCCCCAAAATAATCGAACCGGGACTAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAGTACTGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGTACTAAAGGGACCATCAAACTCCCCCCCCGGAGCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGGAAATGT
CAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATTTCGACT
TTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAACAGTTTTTTATAT
GAAAAATCATCTACTCGAGAAGTTACATCCGAATTTAAATAGACCAATAAATCTCTCTGGAATCTCTCTGGAGGTTTCTT
GGTTAAAACAGACCAATAAATGGTCGAGTGTGCCACAACGTGCAAACGGTGTCGAAAGTCATTCAAACTTGACATGGATG
CCTCACAATGGCATGCCCACCTGCTTACAGAAGTTGAGATCATTTCAAAGATGTCCAAAAATGAACCATCTTCAACGAAT
GGTGTTTGGGTAGGCGACAAGGGTCTGGTTGAAAGCACGTTGTTTTTTGATATCTACCAACTTGTTTGTATTTTCGACAA
GTTTTGCATTTTTGTGGAGTTTTTGTGTGAAAAAAGGCCAATAAATGGCTAGGCGTAACGCAACGTGCAAACGGTATCGA
AAGTCATTCAAACCTGACATGGATGCCTCATATGTCCGTGCAAGATTGTTGCAAGAAGTTGGGGTCATTTATCCATAGTG
CAGAAAAACAACAGAGGAGAGGAGTATGTCACACTAGGCCAGACAGGTGCATCCGTGAGCATGTTGTTTTCTAGATTTGA
ATTCTTCTGTTATTTGCAATTTTTGTCATTATCTATCAACATGAAAATTTTCTTATGTCCTAATCATTTCTTGAAATTAG
TCCACAATTTTGGAATTTCAAATTGTGCATGAAAATTTTACAAACTTGAACACTTTTTCCAAAATTCTTAACAAATTCCC
AACAATAGATGAAAATTTTGAAGACATATTGCAATCCACTTAATTTTATTTAATAATTTATCATTTTTTTAAACACAAAC
ATTTCTTAAATTTGTGAACAAAAAACCAAAAAACTAGAACATTTCTTGAAATTTTAGGTTTTTTTATGTCATAGAAAATA
TTTGAAAACAAGAATATGTTTTGTTATTCCAAATAATAATTAATAATAAATTTTTAAAAAGAGAAAAATGAATTATAAGA
AAAAAAGAGAATAAAAACTAAATAATAGATAGAAAAAAATCACTTAGGCCTCGGCCTTGGCCCGTCGGGTGCCTGTTGAA
CCGTTCCTAGCGTTACTTTTCTGTTTCTTTTTCGTTTTTTCCTGTTCCTCTTTTCCTTTTCTCTCATTTTTCCAATTTCT
TTTTTACGTTTTCCTATTTTATTTTTCTTTTTTATTGCCTTTCGTTTTCATTTTTCCTTTTTTCATGCTTACTTTATTTT
CACCAATTTTTCAGAAATTCTAAATGATGTTTGCATTTTTTTCAAATTTGTTTAATTCTCTAAAGCTATGTTCCTATTTT
GAAATTTTGTTCAGAAATTCCAAGAAAAGTATAAAATTTCAAGACATGTTAGCTTCTTTTTAAAAAAATGTCTGAAATAT
AGAAAATACTCCCTCCGTCCCATAATATAAGAATGTTTTTGATACTAGTGTAGTGTCAAAAACGTTCTTATATTATGGGA
CAGAGGGAGTAGAACCTAAAAAGTTGTTAACTTCTTTCAAAAAAGTTCAAAAATTGAAAAAAAACATATACTTCGAAATA
TCAAAAAATTTTGAATTTTTTCTCACAAATTAAAAAACTTTCGGAAATTTAAAAATTGTTACCTTTTCCAAATTATTTTC
GCCAATTTATTAAAGGTGTAAGGTTTGCAAAGAAAGAAACTACAAATGCAAAAAAAGTTTAGCGAATTTCACAAAATGTT
TGTGTTTTCAAAATTTTGTTCATAATCTAAAAAATGACCATGTTTTCAATTTTGTTCCGATTCTCAAAATATATTCACGT
TGTCAAAAAATTGTTTGTAATTCCAAACTATTTGTGTTTTCAATTTTGTTTTTGTTTTTCGCAAAAATAGTTTTTTAGAT
TCTCAAAAAAATTCGGGTTTTCACAAAATTTAAAAAGTGTTCAGCTTTTGAAAACAATTTATAAATTATTTTAAAAAATT
TGTTCTCAGAGTCGCTAGCGCCACTAATTCTTATAAATTTGCATAGGTCATTAGTCACTTGGACTTGCTAGCACCACCTG
CTTTATTCTCCCTATAACATGTGTGTGCTCTGCGGTTTGATTCATGTGAGGTCTAGGGTTTGATTCCCGGGCATACTTTT
TTTATTACGTTTATTTCGCCCCAAAGAGGTGTTCTTGCACAGCGTTGCCGATGGGTCGTCTCATATGTACTCGCACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTAGTCCCCAAAATAATCGAACCGGGACTAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAGTCCCGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACTCTC-CCCCCCCGGTGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATAG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAAAAGTTTT
TTATATGAAAAATCATCTACTCGAGAAGTTACATCCGAATTTAA-
>chr4D_2870
ACG-----------------------------------------------------------------------------
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-------------------------------------------------------------------------CACTAGT
AGAAAAAGAGGCTTCCATACACCCCCATTAGTCCCCAAAATAATCGAACCGGGACTAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
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------------------------------------------------------------------------TCCCGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAATCGTGGTTGGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACTCCC-CCCCCCCT-TGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATATCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAAAAGTTTT
TTATATGAAAAATCATCTACTCGAAAAGTTACATCCGGTTTTAAC
>chr6D_2872
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------------------------------------------------------------------------TCACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTAGTCCCCAAAATAATTGAACCGCGACCAAAGGGGTCTTTGGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
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------------------------------------------------------------------------TCCCGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACTCTA-CCCCCC---TGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAAATTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAAAAGTTTT
TTATATGAAAAATCATCTACTCGAAAAGTTACATCCGAATTTAAC
>chr2D_2872
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------------------------------------------------------------------------TCACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTGGTCCCCAAAATAATCGAACCGCGACCAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
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------------------------------------------------------------------------TCTCGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTTGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACT--A-CCCCCC---TGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACAAACTCGGATGAAAAAGTTTT
TTACATGAAAAATCATCTACTCGAAAAGTTACATCCGAATTTAAC
>chr2D_2872
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------------------------------------------------------------------------TCACTAGT
AGAAAAAGAGGCTTCCATACGCCCACATTAGTCCCCAAAATAATCGAACCGCGACCAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
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------------------------------------------------------------------------TCCCGGTT
GGCCTGGCCAACCGAGACTAAAGGTCCTCAGGCTGGCCCGAAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACTC----CCCCC---AGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACGTTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACAAACTCGGATGAAAAAGTTTT
TTACATGAAAAATCATCTACTCGAAAAGTTACATCCGAATTTAAC
>chr4D_2873
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-------------------------------------------------------------------------CACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTAGTCCCCAAAATAATCGAACCGCGACCAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
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------------------------------------------------------------------------TCCCGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAATGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACTCTACCCCCCC---TGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAAAAGTTTT
TTATATGAAAAATCATCTACTCGAGAAA-----------------
>chr7D_2873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTAGTCCCCAAAATAATCGAACCGCGATCAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TCCCGGTT
GGCCTGGCCAACCGGAACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAAAGGTTAGTCCTTTAGTCGTGGTTAGCCAGACCAACC
GGTACTAAAGGGCCCATCAAACTC----CCCCC---CGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAAATTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAAAAGTTTT
TTATATGAAAAATCATCTACTCGAAAAGTTACATCCGAATTTAAC
>chr1D_2873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CACTAGT
AGAAAAAGAGGCTTCCATACGCCCCCATTAGTC-CCCAAATAATCGAACCGCGACCAAAGGGGTCTTTAGTCGCGGTTCG
GGAGGAGACCCGCGACCAACTATCTGGGCCCAGCGCGCTCGGTCGACAGCTGGCGGACGGGAGGGGCTTTAG--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TCCCGGTT
GGCCTGGCCAACCGGGACTAAAGGTCCTCAGGCTGGCCCGAAGGCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTAA
AGGTTAGTCCTTTAGTCGCGGTTGGCCAGACCAACCGGGACTGAAGG-TAGTCCTTTAGTCGCGGTTGGCCAGACCAACC
GGGACTAAAGGGCCCATCAAACTCTA-CCCCCC---TGGACCGCCTTTTCAGTTTTAGAAAAACCAAAAGAAAATGATGG
AAATGTCAAAAAAATAAAATAAAATAAGTTTCTCATGTGATATGTGGTCTAGTTGTTGGGAAAATTAACAAATATGAATT
TCGACTTTATTTGCAAAATCTCTCTGGAATTTCTTAAAATGGGCATAACTTTTGCATACGAACTCGGATGAAAAAGTTTT
TTATATGAAAAATCATCTACTTGAAAAGTT---------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------S------------------------SS------S-SS--S---S--SS-S--S-SSS----S----
----------S-----S-SS--S--S--S--S-SS-S----S--SSS-----------SS----S---S----S------
---S-S---S-S-SS---------SS-S-S-SSSSSSSS--SSSSSSSSSSS-----SSS---S-----S--S--S--S-
----------------S-----S--------S-----S-----S-SS-S-S--S-S------S-SSS------S--S---
-----------S-------------------------------------S--------------SSS-----S-----SS
-S-------S--S--S-----S--S-----S--S----SSS-------S------S--S-S--S-----S--S---S-S-
SSSSSSSSSSSS-----SS----S----------------S-SSS----S-SS---------SSS---------S-----
--------S------S-S--S-----S--S--------S----S---S------------S----S-S------------
S---SS----S----S--S--S-S---SSSS-S-S-SSSS--S-S-S-----SS---SS----------S-----S-S--
----SS-------SS-S--------------S----S---------S-S-S-------S--------------S---S--
-SS------S----S--S---S----------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
-----------S--------------------------------------------------------------------
-S------------------------------------------------------------------------------
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-------------------------S------------------------------------------------------
-------------------------------S------------------------------------------------
S--------------------------------------------------------------S----------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------------------------------------
>forward_85
-----------------------------------------------------------------TCACCTCGATTTCGT
TGGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_1517
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGTC
AACTGCAGCGTATTCG----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>forward_1063
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCTTGTTGCTTGCATGCACC---------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_2049
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------GCAGCAGCGTCTTTCGTATG------------
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---------------------------------------------
>forward_1412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------ACTACATCCCCGTGTACCGA----------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_2421
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------TGCATACATCGATACCCGGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_2068
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCAGCAGCGTCTTTCGTATG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_2892
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------TTTCCATACGCCCCCATTAGT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------
