>input_sequence_50349
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---ATGCCGGCCGCTTCGTCGTCGGCCGCGGCAACGCCGGCAACCAGCCGCGGCGGCGGTCGGGTCTCCGCTTTCACGAT
GCGCGCGGTGGCACGCATGTCGAGGGCGCGATGGTTCATCTTCCTGAGGCGGGTATACCAGTACCAGAACGGCCCGAGGT
CCGACCTGGGCTCCAACCCTTTCAACTCGTCCGGCTGGCTCGCTCTCGAGCTCGGCGTGATCGTCGCGCAGATGGTCATC
ACCACCACCGTCGTGGCCACCTCCCCAAAGGAACGCCCCGCGTGGCCGCTTCGGCTCTGGGTGTGCGCGTACAACGTCGG
CAACGTGCTCAGCCTCCCACTCCTCTACTGGCGCCACCGACATTCATCGGCCGCCGGACGAGGCGACGACCCGGAGATGC
ACGGCGCCGGTGACGCTCTAAGGTTCAAGCTTGATACCTTAATGTTGCGCGGAACGTACAAATTGAACATTTTACATGCT
TAAGTTTCTTGACGAAATTCTTTGTGTACTAATTTCAGGAACAGCTCGTATCTGATGAACAAGGCTCGGGCGTTCCTGGA
GCTCTTCTTCGCGATGTGGTTTGTGATGGGCAACGTGTGGGTGTTCGACGCGCGGCTCGGGTCGTTCCACCGCGCGCCGC
GGCTGTACGCGCTCTGCATCGGCCTGCTCGCCTGGAATGCCGTCGTCTACTCGCTCCCCTTCCTCCTCTTCCTCCTGCTC
TGCTGCTTCGTCCCGGTCGTCGGGTACGCGCTCGGGTACAACATGAACTCGGCCTCCGTCGGCCGGGGCGCCTCCGACGA
GCAGCTGGACGCGCTGCCGCGATGGCGGTTCAAGGAGCCCGACGTGCCGAGAGACCGCGAGAAAGACGATGAAGTAAGTA
CTTGCCGATTTCACCCGCATTTCTCTGCATATTTTCAGGCACAGGTC----------------------CTGGTCTGGAT
AAGTAGAAGCAAAGATAGCAGCATTTTCTTTTAGGTGAGGTCAGAAAATGGAGTACCAAAGAGGAC-----GGATTCACC
AAACATTGGCGACCTAAACTTTTAAACGTGCGCGAGCAACTCGAACATGATCCCTTTTTGGGCGATACTAAGATAAGAAG
CACTAACTTTGCCTTTTGGGACGGTGCCTAAGCTCACAAGCATCTCCTTG-----------CAATTTAGCAACATGGCAA
AACATGGCCTGTTCCTTTTCTCTCTCGTTGAAACATGAACT-GGTGCTATTAGTTATGGTGAACATTTGGCATGCGTGTT
TAGTCCATGGA----TGAAAATATTGTGTAATCAACTTGCTTCAGTTCGCAACAAAAGATAGTTTTTTTTCTCTCTGAAA
TTGTTTCGCGTGTAAACGCAGGAGTGCTGCATATGCCTGGCGCAGTACAGGGAGAAAGAGGAGGTGAGGCAGCTGCCCTG
CACACACATGTTCCACCTGAAATGCGTGGACAGGTGGCTGAGGATCATCTCCTCTTGCCCTCTCTGCAAGCAAGAGCTCA
GCTGA---------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G255300
GATGTTTGTACTACACAGTGTAGGCAGATTCACTGAAAGGCGCGAGTAAGTGTGTTGCACAACCTGCGAAAATGTGTTGT
GCATTAAGGCTGGTCACAATAAGAGTATCATAGCTAGTATCACGCATGCCAACTAGACATTTACGTTGAGGTGACACATA
ATTTAGTGAGAGGAGAGAGGATTGAGTATCATGATATGATACCGTATCATATTAAATGATGTAGTAGTATATGTCTTGCA
TGGCGATAAATGAT-CCAATATGATACCAAACTATTATATTATGCATTATAGAGGTAATATTATACACTAGTATCATATG
CATGGTCCTAGTATATGATACTTCCCATTGTGACTAGTCTAACTAAGGTGTGTTGCATGACGCGTAAAGATGTGATGCGC
GACACATGAAGGTGTGTTGCGCTGCGCACCGCTTACGTGAAGTTATGTTGTGTAACGCATGCAAGGTGTGTTGTGCGGCG
CGTAAAGGTGTATTGCATGAC-GAAGCACAAGCACACCACCAACAGGGAGCATAAGTAAAAAAAAT-TGATGATGTGT-G
AGCACAAGTTTGTTATATTTGGTAGCACAAGTTACGTCCAAAAATAG----------TTTGTCGAAACTTATCAACACGA
AATCTAGTTTCAAATATCTCAACACTAAGATAGCTTAGTATCCCAAAACATTAACTAGAAGTTGATCTTGGTCGAGAGGG
AGCCAAGTCATCTACCCACTGTAACCAGATGGATCTCCTTGCTTCCCACCTACACAACACCAGACACAAGCCAGAGCCAG
AGGAGCCAAGAGGAAGCACACGGCGGGAAGGAGACGGTTAGGCCAACCGTTTTTGCCCCTTCGTTCACCCCTCCACTCTT
GGCGCCAAAGCAAAGCCGTTAGATTATTGG--------------------------------------------------
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-----------------------------------------------------------TCACCATCTCAAACCCAACTC
GCCTCTTCCCTCCCACCCATTTATCCCTCGAGGCGCGAAGCCAACCATGCCAATGCCCCTCGTCCCCACCACCGACCACC
ATAATGCCGGCCGCTTCGTCGTCGGCCGCGGCAACGCCGGCAACCAGCCGCGGCGGCGGTCGGGTCTCCGCTTTCACGAT
GCGCGCGGTGGCACGCATGTCGAGGGCGCGATGGTTCATCTTCCTGAGGCGGGTATACCAGTACCAGAACGGCCCGAGGT
CCGACCTGGGCTCCAACCCTTTCAACTCGTCCGGCTGGCTCGCTCTCGAGCTCGGCGTGATCGTCGCGCAGATGGTCATC
ACCACCACCGTCGTGGCCACCTCCCCAAAGGAACGCCCCGCGTGGCCGCTTCGGCTCTGGGTGTGCGCGTACAACGTCGG
CAACGTGCTCAGCCTCCCACTCCTCTACTGGCGCCACCGACATTCATCGGCCGCCGGACGAGGCGACGACCCGGAGATGC
ACGGCGCCGGTGACGCTCTAAGGTTCAAGCTTGATACCTTAATGTTGCGCGGAACGTACAAATTGAACATTTTACATGCT
TAAGTTTCTTGACGAAATTCTTTGTGTACTAATTTCAGGAACAGCTCGTATCTGATGAACAAGGCTCGGGCGTTCCTGGA
GCTCTTCTTCGCGATGTGGTTTGTGATGGGCAACGTGTGGGTGTTCGACGCGCGGCTCGGGTCGTTCCACCGCGCGCCGC
GGCTGTACGCGCTCTGCATCGGCCTGCTCGCCTGGAATGCCGTCGTCTACTCGCTCCCCTTCCTCCTCTTCCTCCTGCTC
TGCTGCTTCGTCCCGGTCGTCGGGTACGCGCTCGGGTACAACATGAACTCGGCCTCCGTCGGCCGGGGCGCCTCCGACGA
GCAGCTGGACGCGCTGCCGCGATGGCGGTTCAAGGAGCCCGACGTGCCGAGAGACCGCGAGAAAGACGATGAAGTAAGTA
CTTGCCGATTTCACCCGCATTTCTCTGCATATTTTCAGGCACAGGTC----------------------CTGGTCTGGAT
AAGTAGAAGCAAAGATAGCAGCATTTTCTTTTAGGTGAGGTCAGAAAATGGAGTACCAAAGAGGAC-----GGATTCACC
AAACATTGGCGACCTAAACTTTTAAACGTGCGCGAGCAACTCGAACATGATCCCTTTTTGGGCGATACTAAGATAAGAAG
CACTAACTTTGCCTTTTGGGACGGTGCCTAAGCTCACAAGCATCTCCTTG-----------CAATTTAGCAACATGGCAA
AACATGGCCTGTTCCTTTTCTCTCTCGTTGAAACATGAACT-GGTGCTATTAGTTATGGTGAACATTTGGCATGCGTGTT
TAGTCCATGGA----TGAAAATATTGTGTAATCAACTTGCTTCAGTTCGCAACAAAAGATAGTTTTTTTTCTCTCTGAAA
TTGTTTCGCGTGTAAACGCAGGAGTGCTGCATATGCCTGGCGCAGTACAGGGAGAAAGAGGAGGTGAGGCAGCTGCCCTG
CACACACATGTTCCACCTGAAATGCGTGGACAGGTGGCTGAGGATCATCTCCTCTTGCCCTCTCTGCAAGCAAGAGCTCA
GCTGACCGATGGCTGCACATATACGGCGCAACGGTGATTGATCAGTGGAGCTTGCATTCCAAGCCAGAGATGCGTCGATC
GGATGGCGCGGCGCGCTCCGACGCATGCAGCGCACCTCACTGACCTCTTTCGCCAACCCTCTACTAACCTAGACACTGAC
CAGCGATGGAGACACCTCTGTTGCAGCTCGAGATAGATTAATTTACCAGCTTGGGCAGGTGGGAAATGTGTAAAGAAATT
GTTGTAGCCATGAGCAGGCG-------GCCTACAATACAAGTACTGTTTGTTCTCCGCTTAGCTCATTAATTGTACCATG
CCAACAGCCAAGAACTGCCAGATGCTGTTGTTCTTGCGAAAGCACATCTCAACAATTACAAGAACATGCATAGATGGACA
CAAAAACAAGGGGAAATAAGAAATAGGCCATTGCAATTCTTTTATCAATAATCTCGTAGCAAGAAAGCAAATACATGTGT
ATATGTATAAGCTCTGTTTTTTT----AGCAAAATGTATACGCTCCCTTCGGAACATAATTAATAAATACCGAGGATCAC
ACTTAGCCCGACAAAGTGCCTG-----AGCATCTCCAACAACCTTTGCATATTGGATCGCTAAAGACCGATGATAGAAAG
AGAAGAGAGAAGGTTTAGCAATCCAATATGGTTTTTTTCTTTTGCTTTGGTATCCTTTGTATATTGGATTGCTATATTTA
CACAAAACACACAATAACATGTGGAGATAGTTTGTCATGGACGCATGGCACACTAGCATATGCACATTTATACATATACT
GGCAAAACTCTCGTACACGTACA------CACATGCGTACATGTACATGTACACGTACACACGCACACACGCGTACCCGT
ACATGTACACACCCTAGTACGCGTACAACACACATGCACACAACACACTAGTACACACACTCACACGTGCATAACACACG
CGTACACAGTACATG----AAAAAAAACACGTACACACCACACACGCGTATACAACACACAAATAATACAC
>chr3B_1
GATATTTGTACTACACCGTGTAGGCAGATTCACTGAAAGGCGCGAGTAGGTGTGTTGCACAACCTGCGAAGATGTGTTGT
GTGTTAAGGCTGGTCACAATAAGAGTATCATAGCTAGTGTCATAGATGCCAACTAGACATTTACGTTGAGGTGACACATA
ATTTAATGAGAGGAGAGAGGATTGAGTACCATGATATGATACCGTATCATATTACATGATGTAGTAGTATATGTCTTGCA
TGGTGATAAATGATGCCAATATGATACCAAACTATTATACTATGCATTATAGAGGTAATATTATACACTAGTATCATATG
CATGGTCCTAGTATATGGTACTTCCCATTGTGACTAGCCTAACTAAGGTGTGTTGCAGGACGCGTAAAGATGTGGTGCGC
GACACACGAAGGTGTGTTGCGCTGCGCGCCGCTTACGTGAAGTTATGTTGTGTAACGCATGCAAGGTGTGTTGTGCGGCG
CGTAAAGGTGTATTGCATGACAGAAGCACAAGCACACCACCAACTGGGAGCATAAGTAAAAAGAAAATGATGATGTGT-G
AGCACAAGTTTGTTATATTTGGTAGCACAAGTTCGGTCCAAAAATAG----------TTTGTCGAAACTTATCAACACGA
AATCTAGTTTCAAACATCTCAACACTAAGATAGCTTAGTATCCCAAAACATTAACTAGAAGTTGATCTTGGTCGAGAGGG
AGCCAAGTCATCTACCCACTGTAACCAGATGGATCTCCTTGCTTCCCACCTACACAACACCAGACACAAGCCAGAGGCAG
AGGAGCCAAGAGGAAGCATACGGCGGGAAGGAGACGGTTAGGCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACCATCTCAAACCCAACTC
GCCTCTTCCCTCCCACCCATTTATCCCTCGAGGCGCGAAACCAACCATGCCAATGCCCCTCGTCCCCACCACCGACCACC
ATAATGCCGGCCGCTTCGTCGTCGGCCGCGGCAACGGCCGGAACCAGCCGCGGCGGCGGTCGGGTCTCCGCTTTCACCAT
GCGCGCGGTGGCGCGCATGTCGAGGGCGCGGTGGTTCATCTTCCTGAGGCGGGTATACCAGTACCAGAACGGCCCGAGGT
CCGACCTGGGCTCCAACCCTTTCAACTCGTCCGGCTGGCTCGCTCTCGAGCTCGGCGTGATCGTCGCGCAGATGGTCATC
ACCATGGGCGTCGTGGCCACCTCCCCCAAGGAACGCCCCGCGTGGCCGCTTCGGCTCTGGGTCTGCGCGTACAACGTCGG
CAACGTGCTCAGCCTCCCACTCCTCTACTGGCGCCACCGACATTCATCGGCCGCCGGGCGAGGCGACGACCCCGAGATGC
ACGGCGCCGGTGACGCTCTAAGGTTCAAGCTTGATACCTTAATGTTGTGCAGAACGTACAAATTTAACA--TTACATGCT
TAAGCTTCTTGACGAAATTCTTTGTGTACTAATTTCAGGAACAGCTCGTATCTGATGAACAAGGCTCGGGCGTTCCTGGA
GCTCTTCTTCGCGATGTGGTTTGTGATGGGCAACGTGTGGGTGTTCGACTCGCGGCTCGGGTCGTTCCACCGCGCGCCGA
GGTTGTACGCGCTCTGCATCGGCCTGCTCGCCTGGAACGCCGTCGTCTACTCGCTCCCCTTCCTCCTCTTCCTCCTGCTC
TGCTGCTTCGTCCCGGTCGTTGGGTACGCGCTTGGGTACAACATGAACTCGGCCTCCGTTGGCCGGGGCGCCTCCGACGA
GCAGCTGGACGCGCTGCCGCGGTGGCGGTTCAAGGAGCCCGACGTGCCGAGAGACCGCGAGAAGGACGATCAAGTAAGTA
CTTGCCGATTTCACCCGCATTTC----------------------TC----------------------CTGGTCTGGAT
AAGTAGAAGCAAAGATAGCAGCATTTTCTTTTAGGTGAGGTCAGAAAATGGAGTACCAAAGAGGACAGCAGGGATTCACC
AAACATTGGCGACCTAAACTTATAAACGTGCGCGAGCAACTCGAGCATGATCCCTTTTTGGGCGATACTAAGATAAGAAG
CACTAACTTTGCCTTTTGGGACGGTGCCTAAGCTCACAAGCATCTCCTTGCAATGAGTTTGCAATTTAGCAACATGGCAA
AACATGGCCTGTTCCTTTTCTTTCTCGTTGAAACATGAACT-GTCCTAACTAGTTATGGTGAACATTTGGCATGAGTGTT
TAGTCCATGCATGGTTGAGAATATTGTGTAATTAACTTGCTGC-------------------------------------
------------TAAACGCAGGAGTGCTGCATATGCCTGGCGCAGTACAGGGAGAAGGAGGAGGTGAGGCAGCTGCCGTG
CACACACATGTTCCACCTGAAATGCGTGGACAGGTGGCTGAGGATCATCTCCTCTTGCCCTCTCTGCAAGCAAGAGCTCA
GCTGACCGATGGCTGCACATATACGGCGCAACGGTGATTGATCAGTGGAGCTTGCATTCTAAGCCAGAGATGCGTCGATC
GGATGGCGCGGCGCGCTCCGATGCATGCAGCGCACCTCACTGACCTCTTTCGCCAACCCTCTACTAACATTGACACTGAC
CAGCGATGGAGACACCTCTGTTGCAGCTCGAGATAGATTGATTTACCAGCTTGGGCAGGTGGGAAATGTGTAAAGAAATT
GTTGTGTCCATGAGCAGGCGCCAGGCGGCCTACGATGCAAGTACCTTACGATCTCCGCTTAGCTCATTAATTGTACCATG
CCAACAGCCAAGAACTGCTAGATGCTGTTGTTCTTGCGTTGGCACATCTCAACAACTACAAGAACATGCATAGATGGACA
CAAAACCAAGGGGATCAATAA-----------------------------------------------------------
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>chr3A_506
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---------------------------ACAAGCACACCACGAACAGGGAGCATAAGTA---------TGATGATGTGGGG
AGCACAAGTTTGTTATATTTGGTAACACAAGTTTCGGATAGTTACATCCGAAAGTAATTTGTCGAAACTTATCAACACGA
AATCTAGTTTCAAATATCTGAACACTAAGATGGCTTAGTATCCCAAAACATTGATTAGAAGTTGATCTTGGTCGAGAGGG
AGCCAAGTCATCTACCCACTGTAACCAGATGGATCTCCTTGCTTCCCACCTACACAAAACCAGACACAAGCCAGAGCCAG
AGGAGCCAAGAGGAAGCATACGGCGGGAAGGAGACAGTTAGGCCAACCGTTTCCCCCCCTTCGTTCACCCCTCCACTCTT
GGCGCCAAAGCAAAGCCGTTAGATTATTGG--------------------------------------------------
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-----------------------------------------------------------TCACCATCTCAAACCCAACTC
GCCTCTTCCCTCCCACCCATTTATCCCTCGAGGCGCGAAGCCAACCATGCCAATGCCCCTCGTCCCCACCACCGACCACC
--AATGCCGGCCGCTTCGTCGTCGGCCACGGCAACGCCGGCAACCAGCCGCGGCGGCAGTCGGGTCTCCGCTTTCACGAT
GCGCGCGGTGGCGCGCATGTCGAGGGCGCGGTGGTTCATCTTCCTGAGGCGGGTATACCAGTACCAGAACGGCCCGAGGT
CTGACCTGGGCTCCAACCCTTTCAACTCATCCGGCTGGCTCGCTCTTGAGCTCGGCGTGATCGTCGCGCAGATGGTCATC
ACCACCACCGTTGTGGCCACCTCCCCAAAGGAACGCCCCGCGTGGCCGCTTCGGCTCTGGGTCTGCGCGTACAACGTCGG
CAACGTGCTCAGCCTCCCACTCCTCTACTGGCGCCACCGACATTCATCGGCCGCCGGACGAGGCGACGACCCCGAGATGC
ACGGTGCCGGTGACGCTCTAAGGTTCAAGCTTGATACCTTAATGTTGTGCGGAACGTGCAAATTTAACA--TTACATGCT
TAAGTTTCTTGACGAAATTCTTTGTGTACTAATTTCAGGAACAGCTCGTATCTGATGAACAAGGCTCGGGCGTTCCTGGA
GCTCTTCTTCGCGATGTGGTTTGTGATGGGCAACGTGTGGGTGTTCGACGCGCGGCTCGGGTCGTTCCACCGCGCCCCGC
GGCTGTACGCGCTCTGCATCGGCCTGCTCGCGTGGAACGCCGTCGTCTACTCGCTCCCCTTCCTCCTCTTCCTCCTGCTC
TGCTGCTTCGTCCCGGTCGTCGGGTACGCGCTCGGGTACAACATGAACTCGGCCTCGGTCGGCCGAGGCGCCTCCGACGA
GCAGCTGGACGCGCTGCCGCGGTGGCGGTTCAAGGAGCCCGACGTGCCGAGAGACCGCGAGAAGGACGATCAAGTAAGTA
CTTGCCGATTTCACCCGCATTTC----------------------TCTGCATATTTTCAGGCACAGGTCCTGGTCTGGAT
AAGTACAAGCAAAGATAGCAGCATTTTCTTTTAGGTGAGGTCAGAAAATGGAGTACCAAAGAGGACAGCAAGGATTCACC
AAACATTGGCGACCTAAACTTATAAACGTGCGCGAGCAACTCGAGCATGATCCCTTTTTGGGCGATACTAAGATAAGAAG
CACTAACTTTGCCTTTTGGGACGGTGCCTAAGCTCACAAGCATCTCC-----------TTGCAATTTAGCAACATGGCAA
AACATGGCCTGTCCCTTTTCTCTCTCAATGAAACATGAACTAGTCCTAACTAGTTATGGTGAACATTTGGCACGAGTGTT
TAATTCATACATGGTTGAAAATATTGTGTAATCAACTTGTTTCAATTCACAACAAAAGATAGTTTTTTT-CTCTTTGTAA
TTGTTTCGCGTGTAAACGCAGGAGTGCTGCATATGCCTGGCGCAGTACAGGGAGAAAGAGGAGGTGAGGCAGCTGCCCTG
CACACACATGTTCCACCTGAAATGCGTGGACAGGTGGCTGAGGATCATCTCCTCTTGCCCTCTCTGCAAGCAAGAGCTCA
GCTGACCGATGGCTGCACATATACGGCGCAACGGTGATTGATCAGTGGAGCTTGCATTCTAATCCAGAGATGCGTCGATC
GGATGGCGCGGCGCGCTCCGACGCATGCAGCGCACCTCACTGACCTCTTTCGCCAACCCTCTACTAACCTAGACACTGAC
CAGCGATGGAGACACCTATGTTGCAGCTCGGGATAGATTAATTTACCAGCTTGGGCAGGTGGGAAATGTGTAAAGAAATT
GTTGTATCCATGAGCAGGCG-------GCCTACGATGCAAGTACCGTTTGTTCTCCCGTTAGCTCATTAATTGTACCATG
CCAACAGCCAAGAACTGCTAGATGCTGTTGTTCTTGCGTTGGCACATCTCAACAATTACAAGAACAC----AGATGGACA
CAAAAACAAGGGGAAATAAGAAATAAATCACTGCAATTCTTTTATCAATAATCTCATAGCAT--------ATACATGTGT
ATATGTATAAGCTCTGTTTTTTTTGTGAGCAAAATGTATACACCCTCTTCAAAACATAATTAATAAATACCGAGGAT-AC
ACTTAGCCCGACAAAGTGCCTGCTAAGAGCATCTCCAACAACCTTTATATATTGGATCGCTAAAGATTGATGATAGAAAG
AGAAGAGAGAAGGTTTAGCAATCCAATATGTG-------TTTTGCTTTGGTAGCCTTTGTATATTGGATTGCTATATTTG
CACAAAACACACAATGACATATGAGGATAATTTATCATAGACGCATCACACACTAGCATACGTACATTTATACATATACT
AGCACAACTCTCATACACGTACACACGCACACACGTGTACATGTACACGTACACCTACACACGCACACA-----------
-------------CTAGTACGCGTACAACACACAGACACACAAT------------------ACACATGCACAACACACA
CGTACACACACGTGCATGAAAAAAACACACGTACACACCACACACACGTATACAACAGACACATAA-----
>SNPs
---S------------S-------------------------------S---------------------S---------
-SS-----------------------------------S---SSS-----------------------------------
-----S----------------------S-------------------------S-------------------------
---S-----------------------------------S----------------------------------------
-----------------S-------------------S-------------------S----------------S-----
------S--------------------S----------------------------------------------------
--------------------------------------------------------------S--S--------------
---------------------------------S----------------------------------------------
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------------------S---------------------------------SSS-------------------------
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------------S-----------------S-------------------------------------------------
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--------------------------------------------------------------S-----------------
------------------------------------------------------------------------S-------
-----------------------------------------------S----------------S----SS---------
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-------------------------------------S------------------------------------------
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---------------------S-----------------------------------------S------S---------
-----------------------SSSSSSSSSSSSSSSSSSSSSS-----------------------------------
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---------------------S----------------------S-----------------------------------
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-------------------------------------------SSSSS-S------------------------S-----
---------S----------------------------------S---S--------------------S----S--S--
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-----------------------------------------------------------S--------------------
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------S--------------------------S--S-------S-----------------------------------
------------------S-------------------SSS---------------------------------------
-------------------------SSS--S------------------------S-----SSSSSSSSS----------
-----------------------------------------S-S-S----SS-------------------------S--
----------------------------------------------SS------------------SS------------
------------------------------SSSSSSSSS-------------S--------------------------S
---------------S----S--SS----S---S----S-------SS------------S-S-----------------
S---S-------S--------------------S-S-----------S------S--------------SSSSSSSSSSS
SSSSSSSSSSSSS---------------------SS-------SSSSSSSSSSSSSSSSSSS----S----S-------S
--------SSSSSSS----------S-------------------S-----------S---S----SSSSS
>forward_49
-----------------------------TCACTGAAAGGCGCGAGTAA-------------------------------
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>reverse_1631
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------------------------------ATGGTTCATCTTCCTGAGGCG-----------------------------
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>forward_819
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-------------------------------------------------------------------------------G
AGGAGCCAAGAGGAAGCAC-------------------------------------------------------------
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>reverse_3100
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-----------------------------------------------------------CAAGCCAGAGATGCGTCGAT-
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