>input_sequence_50319
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------------------------------------------ATGGCGGCGCTCGCTCCGACGAAGATGCTCGGCACCCG
GCTCAACTTCGCCGGCTCCTCCAGGTACGCCACAGCGGCACCAACTGCTGGCGCACAGAAGATCGTCTCCCTCTTTGATC
GCTTCAAGAAGAAGCCCGCCCCGAAGCCGAAGCCCGCCCCCGTGGCCACCTCGAGCGTGGGCATCGACGACGAGCTCGCC
AAGTGGTACGGTGAGTACAAAGAAATCTGACGGGCTCTCAGCTGAGATTTCACTCTTATCAGATAACTTGTTCAGTTCTG
AATATTCGTGTGTGTCTAAATCTGTCTTCTATTTTGTTTCAGGTCCTGACAGGAGGATCTACTTGCCCAACGGTCTCCTT
GACCGGTCGGAGGTGCCGGAGTACCTCAACGGAGAGGTTCCCGGAGAGTAAGTCATAGGCCTCAACTCCATTTACTCTAC
ACACCATACACATCAGTCATGCTTTGTCATAGCTCTGCAAGAGCAAAGCACAATACTGTTTCCTTTAGCAGCATGGAGTA
CATCACAAGTTCTCACATAACTGAAATGCTCATGTATGTAAGCATAAGTGATATCCATCTGAACTAATTGCTTGCTTTCC
CTTTGGAGTTGCAGCTACGGCTATGATCCTTTTGGCCTGGGCAAGAAGCCAGAGGACTTCGCCAAGTAAGTACAGACAGT
AGTAATCTGCATTTTGCAAGTATAGACTAA--TCTGTGAAGTG--TTCTGTCAAATTTCAGAACATATTCTCTCGACTAA
GCGATCCTGCTCTACACC----TCAATGCTGCAGGTACCAGGCCTTTGAGCTCATCCATGCCAGGTGGGCCATGCTCGGC
GCCGCCGGATTCATCATCCCCGAGGCGCTCAACAAGTTCGGCGCAAACTGCGGTCCCGAGGCAGTTTGGTTCAAGGTA--
-ATTGCTGAATGCAGATCGTCATTTCTCACGGCTTCAGATTCAGAACTTTGGAAGTTTGAGCTCACGGTGCCATAAACAA
CATACATCCTGCAGACCGGCGCCCTGCTCCTTGACGGGAACACCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTC
ATCCTCGCCGTCGTCGCCGAGGTCGTCCTCGTCGGAGGCGCCGAGTACTACAGGATCACCAACGGGCTGGTCAGTATCCT
GAAACATAGATATGCGTTGCCGCAGC-----CAGGCGTCCTTGTAGTGACCAACGGTTTGGTCAACTTCTCCGGCAGGAA
TTTGACGACAAGCTCCACCCCGGTGGCCCATTCGACCCGCTCGGCCTCGCCACCGACCCCGACCAGGCGGCGCTGCTCAA
GGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGCTGGGCTTCTTCATCCAGGCCTACGTCACCGGCGAGG
GCCCCTTCGAGAACCTGTGCGCGCACCTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAG
AGGGTGCCCAGCCTGTGA--------------------------------------------------------------
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>chr4A_1_TraesCS4A01G226900
CTGTGCAAGTTCTCTGTTTGGGATGAGAAGGAAACTAAGTATTATATCACCCTCGCATAACTTAATCTTTGTTTCTCATG
GTTGAAATTCGTCAAGTTGCTACCTTATGGCATTTGCCACACCCGGAAGATAACTTCAATTTGCATGCAAAAGAATGTGT
ATTGTTCCATGGTTGCTCACCCTTTCCTCCTCTTCTCTATTCCAGGGACACCATTGCCGGTTTGTTTGACGAGTTGGTTG
TAAACACCAAAAAGCTTGCCACCGCAACTTCAAAACAGATTGAAAAATGGCACTGAGCTGCACCACCAGATGGCTGCTGC
TATTTGCTATCTTAGATGGTGATTAGTTGGATAGAGACTACCGTGTCACATTAATATCCCATTTTGAACATTTGTAAGTA
GGTTTGTATTCAAGTAGGGTTCTGACATTATGCTATAGGGATTGTTTGAAATTCTGGAAATGTTGAACATTGTGGTAGTT
AAGAAAGAAAATTCAAACCGATGAAGA-TTTTTATGATCGTTGTACATGTCGGCTTATGTTCTGTTACTGGTTTTGCTCA
TCTCATCTGCTAAAACTTGAGCCTGATTTGGTGCTGTCAAATTGTGATGGAACTCTCGGGGGTGTGTGTGGTCTGGAACT
CTTGTCTTGGTTCTCTCCATCTCTCATTGGATATCTGTCCCTATCTGTTATGTTTGGACCAATTGGTATCTCATGGCTCC
TGATAAACGAGATAGCAAGCGGCCCTAATGGTGCCACATCAGCACCCTCATCTGCCAAGTCAGCACATACCGCCCAATCA
GGCCCAAGCAACAGATAGCCCTCCTGAATACTGAGCCAATCACAGCCCCCTTGGCCTATCCTTGATGGGCCCACAACATC
CTCCAATCCTCATTTCCAACCATTTAAACTACCCCACATTTCCCTCCACAACC-ACCCATCACATCCTCCCTTCTTGCTG
AGCTGAGCACGCCCCTTCTCCCTCAACTTTGGGCTCGAGGCAATGGCGGCGCTCGCTCCGACGAAGATGCTCGGCACCCG
GCTCAACTTCGCCGGCTCCTCCAGGTACGCCACAGCGGCACCAACTGCTGGCGCACAGAAGATCGTCTCCCTCTTTGATC
GCTTCAAGAAGAAGCCCGCCCCGAAGCCGAAGCCCGCCCCCGTGGCCACCTCGAGCGTGGGCATCGACGACGAGCTCGCC
AAGTGGTACGGTGAGTACAAAGAAATCTGACGGGCTCTCAGCTGAGATTTCACTCTTATCAGATAACTTGTTCAGTTCTG
AATATTCGTGTGTGTCTAAATCTGTCTTCTATTTTGTTTCAGGTCCTGACAGGAGGATCTACTTGCCCAACGGTCTCCTT
GACCGGTCGGAGGTGCCGGAGTACCTCAACGGAGAGGTTCCCGGAGAGTAAGTCATAGGCCTCAACTCCATTTACTCTAC
ACACCATACACATCAGTCATGCTTTGTCATAGCTCTGCAAGAGCAAAGCACAATACTGTTTCCTTTAGCAGCATGGAGTA
CATCACAAGTTCTCACATAACTGAAATGCTCATGTATGTAAGCATAAGTGATATCCATCTGAACTAATTGCTTGCTTTCC
CTTTGGAGTTGCAGCTACGGCTATGATCCTTTTGGCCTGGGCAAGAAGCCAGAGGACTTCGCCAAGTAAGTACAGACAGT
AGTAATCTGCATTTTGCAAGTATAGACTAA--TCTGTGAAGTG--TTCTGTCAAATTTCAGAACATATTCTCTCGACTAA
GCGATCCTGCTCTACACC----TCAATGCTGCAGGTACCAGGCCTTTGAGCTCATCCATGCCAGGTGGGCCATGCTCGGC
GCCGCCGGATTCATCATCCCCGAGGCGCTCAACAAGTTCGGCGCAAACTGCGGTCCCGAGGCAGTTTGGTTCAAGGTA--
-ATTGCTGAATGCAGATCGTCATTTCTCACGGCTTCAGATTCAGAACTTTGGAAGTTTGAGCTCACGGTGCCATAAACAA
CATACATCCTGCAGACCGGCGCCCTGCTCCTTGACGGGAACACCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTC
ATCCTCGCCGTCGTCGCCGAGGTCGTCCTCGTCGGAGGCGCCGAGTACTACAGGATCACCAACGGGCTGGTCAGTATCCT
GAAACATAGATATGCGTTGCCGCAGC-----CAGGCGTCCTTGTAGTGACCAACGGTTTGGTCAACTTCTCCGGCAGGAA
TTTGACGACAAGCTCCACCCCGGTGGCCCATTCGACCCGCTCGGCCTCGCCACCGACCCCGACCAGGCGGCGCTGCTCAA
GGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGCTGGGCTTCTTCATCCAGGCCTACGTCACCGGCGAGG
GCCCCTTCGAGAACCTGTGCGCGCACCTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAG
AGGGTGCCCAGCCTGTGAGCTGGCCGTTTATTGCCCGTCCGCCGCCGTCGGTTGCTGATG-ATCAGCTGCGTG-----CG
CGCGATGCAGCAGCATGTGCTGTGTGAATTTTACCGGGAAAAGTT-TGAGAGTACGAATGTGCCGTACGTGTAAATTATC
AA-GGGCAGAAGAAACATGACCGTTCTGATTTCTGATGGGAGTATCGGAC------------------------------
-------------------------------------CACTGCTACTTGAGTAATTTCTGAAATGGTTTTCATCATCGTT
AAAAACCAGATTGACTCTTTTTGAAACTTGATTGGTT-------------------------------------AAGTCC
TTGCATATATATAGTGAACCCGTTATCGATTAG--TACATTGTATGCAT-AGATTACAAATATATTATTGCCGAATCTGA
AGTGCTGGAATTATACCAAAATCTTACAGACTCTAGGCTATGTTCTTCACATATAGCAAAATTTCTATGT-CAATAGTAA
--TTTAAAAAACTTTTGTATATCACAAGAATATAAAGACAACAT------------------------------------
-------------------------------------------GTATGTATCATATAGACCGAAGTTGCAAATGCATATT
GAATCC-AATATTTGACATACCAAAAAAGAACTCAAAAATACTTC-----TTTGAATGGTATTTTCTAAAATACCATTGA
CAACAAAT----TCAAATTTGCTACTATTGAGATCAAATGCGCGTATTTTTAG--TTTCTCCATTTTTGGATTAAAGTTT
GATCCAAAAAGTTAGATGGGACAGGGTAAATGCATGCAGTCGTGATTGAAGATGAATACATTGGAAGTTTTCATGCAAAG
AAAAAGAAAATGCATGCAGTATCAGTGCTTCCTAATTTTATTAAAGTTTTTCATGATTAATAGAGGTGCTACTAAAGTTC
ATGCATGGGCCCTCTAACACACTTGTATGTAAGGTGTCTTGCT-------------------------TCTACCACCAAT
G------GCCCATGCAAATAATATCTTACGGTGAGTTTGGTCCATGGTGCACATTGACCATGTTTACAATGCAATGGGCC
AAGCTGACTTGGCCCATCAGAAGGCCCAAATCATCCATTGCCCTTTGATCATTTTTTC
>chr4D_1
CTGTGCAAGTTCTCTGTTTGTGATGAGAAGGAAACTAAGTATTATCTCACCCTCGCATAGCTTAATCTTTGTTTCTCATG
GTTGAAATTCGTCAAGTTGCTACCTTATGGCATTTGCCACACCCAGAAGATAACTTCAATTTTCATGGAAAAGAATGTGT
ATTGTTCCATGGTTGCTCACCCTT---TCCTCTTCTCTATTCCAGGGATACCATTGCTGGTTTGTTTGACGAGTTGGTTG
TAAACACCAAAAAGCTTGCCACCGCAACTTCAAAACAGATTGAAAAATGGCACTGAGCTGCACCACCAGATGGCTGCTGC
TATTTGCTATCTTAGATGGTGATTAGTTGGATAGAAACTACTGTGTCACATTAATATCCCATTTTGAACATTTGTAAGTA
GGTTTGTATTCAAGTAGGGTTCTGACATTATGCTATAGGGCTTGTTTGAAATTCTGGAAATGTTGAACATTGTGGTAGTT
AAGAAAGAAAATTCGAACCGATGGATGCTTTTTATGATTGTTGCACATGTCGGCTTATGTTCTGTTACTAGTGTTGCTCA
TCTCATATATTAAAACTTGAGTCTGATTTGGTGCTGTCAAATTGTGATGGATCTCT-GGGTGTGTGTGTGGTCTGGAACT
CTTGTCTTGGTTCTCTCCATCTCTCATTGGATATCTGTCCCTATCTGTTATGTTTGGACCAATTGGTATCTCATGGCTCC
TGATAAACGAGATAACAAGCGGCCCTAATGGTGCCACATCAGCACCCTCATCTGCCAAGTCAGCACAGCCCGCCCAATCA
GGCCCAAGCAACAGATAGCCCTCCTGAATACTGAGCCAATCACAGCCCCCTTGGCCTATCCTTCATTGGCCCACAACATC
CTCCAATCCTCATTTCCAACCATTTAAACTACCCCACATTTCCCTCCACAATCAACCCATCACATCCTCCCTTCTTGCTG
AGCTGAGCACGCCCCTTCTCTCTCAACTTTGGGCTCGAGGCAATGGCGGCGCTCGCTCCGACGAAGATGCTCGGCACCCG
GCTCAACTTCGCCGGCTCCTCCAGGTACGCCACAGCGGCACCAACTGCTGGCGCACAGAAGATCGTCTCCCTCTTTGATC
GCTTCAAGAAGAAGCCTGCCCCGAAGCCGAAGCCCGCCCCCGTGGCCACCTCGAGCGTAGGCATCGACGACGAGCTCGCC
AAGTGGTACGGTGAGTACAGAGAAATCTGACGGGCTCGCAGCTGAGATTGCACTCTTTTCAGGTAACTTGTTCAGTTCTG
AATATTCGTATGTGTCTAAATCTGTTTTCTA-TTTGTTTCAGGCCCTGACAGGAGGATCTACTTGCCCAACGGACTCCTT
GACCGGTCGGAGGTGCCGGAGTACCTCAACGGAGAGGTTCCCGGAGAGTAAGTCATAGGCCTCC-CTCCATTTACTCTAC
ACACCATACGTT--AGTCATGCTTTGTCATAGCTCTGCAAGAGCAAAGCACAGTACTGTTTCCTTTAGCAGCATGTAGTA
CATCACAAGCTCTCCCATGACTGAAATGCTCATGTATGTAAACATAAGTGATATGCATCTGAACTAATTGCTTGCTTTCC
CTTTGGACTTGCAGCTACGGCTATGATCCTTTTGGTCTGGGCAAGAAGCCAGAGGACTTCGCCAAGTAAGTACAG----T
ACTAATCTGCATTTTGCAAGTATAGACTAAAATCTGTGAAGTG--TTCTGTCAAATTTCAGAATATGTTCTCTCGACTAA
GCAATCCTGTCCTGGTATTATTTCAATTCTGCAGGTACCAGGCCTTTGAGCTCATCCATGCCAGGTGGGCCATGCTCGGC
GCCGCCGGATTCATCATCCCCGAGGCGCTCAACAAGTTCGGCGCAAACTGCGGTCCCGAGGCCGTTTGGTTCAAGGTA--
-ATTGCTGAATGCTGATCGTCAGTTTTCACGGCTTCAGATTCAGAACTCTGCAAGTTTGAACTCACGGTGCCATAAACAA
CAT----CCTGCAGACTGGCGCCCTTCTCCTTGACGGCAACACCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTG
ATCCTCGCCGTCGTCGCCGAGGTCGTCCTCGTCGGAGGCGCCGAGTACTACAGGATCACCAACGGACTGGTCAGTATCCT
GAAACATAGATATTCGTTGCCGCAGCTCAGCCAGGCGTCCTTGTACTGACCAACGGTTTCGTCAACCTCTCCGGCAGGAA
TTTGATGACAAGCTCCACCCCGGTGGCCCATTCGACCCGCTCGGCCTCGCCACCGACCCCGACCAGGCGGCGCTGCTCAA
GGTGAAGGAGATCAAGAACGGACGGCTGGCCATGTTCTCCATGCTGGGCTTCTTCATCCAGGCCTACGTCACCGGCGAGG
GCCCCTTTGAGAACCTGTGCGCGCACCTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAG
AGGGTGCCCAGCCTGTGAGCTGGCCGTTGATTGCCCGTCCGCCGCCGTCGGCTGTTGATGGATCAGCTGCGTGCGATGCG
CGCGATGCAGCATCATGTGCTGTGTGAATTTTACCGGGGAAAAGTATGAGAGTACGAATGTGCCGTACGTGTAAATTATC
AA-GGGCAGAAGAAACATGATCGTTCTGATTTCTGATGGGAGTATCGGACCACTGCTTCAGCTTGTGCTTGATTTTTTAT
TTTCTTGCTGGAAACTTGTGCTTGATAACTGGTGCGACACTGCTACTTGAGTAATTTCTGAAATGGTTTTTATCATCGTT
AAGAACCAGATTGACTCTTT--GAAACTTGATTAGTT-------------------------------------AAGTCC
TTGCATATAGATGGCAAACTTGTTATTGATTACATTATATGCAGAGATTAAGATTATGAATATATTATTACCGAATTTGA
AGTGCTGGAATTATACCTAAATCTTACAGATTCTAGGCTATATTCTTCACAGACAGCAAAATTTCTATCTCCAATAGTAA
--TTAAAACTCTTTTGATATATCCCGAGAATATGAATATAATAT------------------------------------
-------------------------------------------GTATGCATCATATAGACCAAAGTTGCAAATTCAAATT
CAATCAAAATAGTTGACAACG--AAAAAACACTCAAAAATACTTACTCTATATGAATAGTATTTTCTAAAATATTGTTCA
CAATAAAAAAAATCAAATTTGCTGCCATTGAGATCACATATGTGTATTTTTTTTATTTCTCTACGTTTGGATTAAAGTTT
GTTCAAAAAA-TTAGATGGGACAAGACACTCGTGTTTTTTTAGCGAG---------------------------------
--------------------------------------------------------------------------------
------------TCTAACACACTTGACACTTTTTCTTAGGTGTACACACTTACACTTGTGGGTGTCCCTCTACCACCAAT
GGTAAAAGCCCATGCAAATAATGTCTAACGGTGAGTTTGGTCCATGGTGCACATTGACCATGTTTACAATGCAATGGGCC
AAGCTGAGTTGGCCCATCAGAAGGCCCAAATTATTCATTGCC----------------
>chr4B_1
CTGTGCAAGTTCTCTGTTTGTGATGAGAAGGAAATTAAGTATTATCTCACCCT-----------ATCTTTGTTTCTCATG
GCTGAGATTCGTCAAGTTGCTACCTTATGGCATTTGCCACACCCAGAAGATAACTTCAATTTGCATGCAAAAGAATGTGT
ATTGTTCCATGGTTGCTCACCCTTTCCTCCTCTTCTCTATTCCAGGGACACCATTGCCGGTTTATTTGACGAGTTGGTTG
TAAACACCAAAAAGCTTGCCACCGCAACTTCAAAACAGATTGAAAAATGGCACTGAGCTGCACCCCCAGATGGCTGCTGC
TATTTGCTATCTTAGATGGTGATTAGTTGGATAGAGACTACTGTGTCACATTAATATCCCATTTTGAACATTTGTAAGTA
GGTTTGTATTCAAGTAGGGTTCTGACATTATGCTATAGGGCTTGTTTGAAATTCTCAAAATGTTGAACATTGTGGTAGTT
AAGAAAGAAAGTTCGAACCGATGGATGCTTCTTATGATCGTTGTACATGTCGGGTTATGTTCTGTTACTGGTTTTGCTCA
TCTCATCTGTTAAAACTTGAGCCTGATTTGGTGCTGTCAAATTGTGATGGATCTCT-GGGGGTGTGTGTGGTCTGGAACT
CTTGTCTTGGTTCTCTCCATCTCTCATTGGATATCTGTCCCTATCTGTTATGTTTGGACCAATTGGTATCTCATGGCTCC
TGATAAACGAGATAACAAGCGGCCCTAATGGTGCCACATCAGCACCCTCATCTGCCAAGTCAGCACAGCCCGCCCAATCA
GGCCCAAGCAACAGATAGCCCTCCTGAATACTGAGCCAATCACAGCCCCCTCGGCCTATCCTTCATGGGCCCACAACATC
CTCCAATCCTCATTTCCATCCATTTAAACTACACCACATTTCCCTCCACAACC-ACCCATCACATCCTCCCTTCTTGCTG
AGCTGAGCACGCCCCTTCTCTCTCAACTTTGGGCT-GAGGCAATGGCGGCGCTCGCTCCGACGAAGATGCTCGGCACCCG
GCTCAACTTCGCCGGATCCTCCAGGTATGCCACAGCGGCACCAACTGCTGGCGCACAGAAGATCGTCTCCCTCTTTGATC
GCTTCAAGAAGAAGCCCGCCCCGAAGCCGAAGCCCGCACCCGTTGCCACCTCGAGCGTAGGCATCGACGACGAGCTCGCC
AAGTGGTACGGTGAGTACAGAGAAATCTGGGGGGCTCGCAGCTGAGATTGCACTCTTTTCAGGTAACTTGTTCAGTTCTG
AATATAAGTATGTATCTAACTCTGTCTTCTA-TTTGTTTCAGGCCCTGACAGGAGGATCTACTTGCCCAACGGTCTCCTT
GACCGGTCGGAGGTGCCGGAGTACCTCAACGGAGAGGTTCCCGGAGAGTAAGTCATAGGCCTCC-CTCCATTTAGCAGCA
------------------------------------------------------------------------------TA
CTTCACAAGTTCTCACATGACTGAAATGCTCATGTATGTAAGCATAAGTGATATGCATCTGAACTAATTGCTTGCTCTCC
CTTTGGACTTGCAGCTACGGCTATGATCCTTTTGGTCTGGGCAAGAAGCCAGAGGACTTCGCCAAGTAAGTACAG----T
AGTAATCTGCATTTTGCAAGTATAGACTAA--TCTGTGAAGTGTATTCTATCAAATTTCAGAACATATTATCTCGACTAA
GCAATGTTGTCCTGGTATTCTTTCAATTCTGCAGGTACCAGGCCTTTGAGCTCATCCATGCCAGGTGGGCCATGCTCGGC
GCCGCCGGATTCATCATCCCCGAGGCGCTCAACAAGTTCGGCGCAAACTGCGGCCCCGAGGCCGTTTGGTTCAAGGTAGT
AATTGCTGAATGCTGGTCGTCAGTTTTCACGGCTTCAGATTCAGAACTTTGGAAGTTTGAACTCACGGTGCCATAAACAA
CAT----CCTGCAGACCGGCGCCCTTCTCCTCGACGGCAACACCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTG
ATCCTCGCCGTCGTCGCCGAGGTCGTCCTCGTCGGAGGCGCCGAGTACTACAGGATCACCAACGGACTGGTCAGTATCCT
GAAACATAGATATTCGTTGCCGCAGCT-----AGGCGTCCTTGTACTGACCAACGGTTTCGTCAACTTCTCCGGCAGGAA
TTTGATGACAAGCTCCACCCAGGTGGCCCATTCGACCCGCTCGGCCTCGCCACCGACCCGGACCAGGCGGCGCTGCTCAA
GGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGCTGGGGTTCTTCATCCAGGCCTACGTCACCGGCGAGG
GCCCCTTCGAGAACCTGTGCGCGCACCTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAG
AGGGTGCCCAGCCTGTGAGCTGGCCGTTAATTGCCCGTCCGCCGCCGTCGGCTGTTGATG-ATCAGCTGCATG-----CG
CGCGATGCAGCATCATGTGCTGTGTGAATTTTACCGGGGAAAAGTATGAGAGTACGAATGTGCCGTACGTGTAAATTATC
AAGGGGCAGAAGAAACATGACCGTTCTGATTTCTGATGGGAGTATCGGAC------------------------------
-------------------------------------CACTGCTACTTGAGTAATTTCTGAAATGGTTTTCATCATCGTT
AAAAACCAGATTGACTCTTTTTGAAACTTGATTGGTTATTAAGTCCTTGCATATATTGACTTTCCGCAAAAAAAAAGTTC
TTGCATATAGATAGTAAACCTGTTATTGATTACATTATATTATATGCAT-AGATTACAAATATATTATTGCCGAATTTGA
AGTGCTGGAATTATACCAAAATCTTACAGATTCTAGGATATGTTCTTCACATGTAGTAAAATCTCTATCT-CAATAGTAA
TTTTTAAAAACTTTTGATATACCACAAGAATATAAAGATAACATGTACTCCCTCCGTTCCAAAATAGATGACCCAACTTT
GTATTAAATACAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTATGTATCATATAGACCGAAGTTGCAAATGCAAATT
GAATCC-AATAGTTGACAAACCATAAAAAAACTCAAAAATACTTC-----TATGGATAGTATTTTCTAAA----------
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>SNPs
--------------------S------------------------S-------------S--------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
----------------------------------------S---------------------------------------
--------------S--------S-SS-----------------------------------------------------
---------S-----------------------------------------S----S-----------------------
--------------------------------------------------------------------------------
--------------S----------------------------------------------------SS-----------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-------------------S-----------------S-----------S-------S----S-----------------
---------S---------------------S-----------S------------------------------------
---------------------------------------------------------------SS---------------
---------SSSSS--------------------------------------S----------------------S----
------------------S-----------------------------------S-------------------------
-------S---------------------------S---------------------------------------SSSS-
--------------------------------------------------------------------------------
--S------SS--SSSSS---------S----------------------------------------------------
--------------------------------------------------------------S-----------------
-------------S--------S--S----------------------------------S-------------------
---SSSS------------------S-----------S-----------------------------------------S
-----------------------------------------------------------------S--------------
-------------S-------------------------------S-------------S--------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S----------------------S--S-------------------------
------------S-------------------------S---SS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----S----S-----S-----S----S---S----------------------------------S---
------------------------------S-------------------------------------S-----------
----------SS---SS---------------------S-----------------------------------------
----------------------------------------------------------------------------S---
-----------S------S---------S----------------------S-----S---------------SSS--S-
---S---S---------------S-S----------S--SS-S--------SS--------S-SS---------------
-S--S-----S------------S-SS-SSS-SS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-------------SSSS-SSSSSS-SSSSS--------------------------------------
----------------------S---S-----------------------------------------------------
-------S-----------------------S--S-------SSSSSSSSSSSSSSSS
>forward_788
--------------------------------------------------------------------------------
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-----------------------------------------------TCATCTGCCAAGTCAGCACAT------------
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>reverse_1776
--------------------------------------------------------------------------------
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---------------ACCTCAATGCTGCAGGTACC---------------------------------------------
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>forward_1770
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TCTCGACTAA
GCGATCCTGC----------------------------------------------------------------------
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>reverse_3521
--------------------------------------------------------------------------------
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ATGCATGGGCCCTCTAACAC------------------------------------------------------------
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