>input_sequence_50317
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-----------------------------------------------------ATGGAGGAATGCCTTGATCAGCAGCAG
CAGCAGAAGAAGAACAG---CAATGGCCAGCTCCAGAGGCTCGAGGGCATCGAGGAGGAAGGCGGCCCGGCCCCGGCGGA
GAAGTGGCCTCCGACGACGGTGCGGGCGCCGGAGACCCCGACGGAGACGATGGAGTTCCTCGCAAGGTCCTGGAGCCTTT
CGGCCGCGGAGATATCCAAGGCGCTCAAGGTCCTGAGCAGCAAGGGCGTCTGCGACATCCCCGACGTGGGCGTCGTCGCG
GGCGCAGGTAAAGAGCAGAGGT---CGCCACCGCCGCCACTTGACGCGACAATGGCGGCGGCGCAGGCA-----------
----GGAGGAGGAGTGGCGAGCCCGCCGTTCTCTCCCAGGGCGGGCACCATGGACGCGCAGCTCCTTCGAGCCGCGGCCG
CCGCGGGGAGGGCAGGG---GGCAAGACGACGATGGGCGCGTGGATCAAGGAGCAGAAGGAGAAGAAGCGCGCCGAGGCC
CGGTCCCGCAACGCGCAGGCCTACGCGGCGACGTCCGTGGCCGGGGTCGCGGCGGCGGTGGCCGCGCTGGTCGCCGGCGC
GGTGTTCTCGTCCTCGCC---------------TCCTGCCCCCGCCGCGGCGCCGGAGCGCGGCCCGAGGGGCGACGGCG
GGGCGAAGACGGCGGCGGCCATCGCGTCGGCGGCGGCGCTGGTGGCGTCGCACTGCGTGGAGATGGCGCAGGCGATGGGC
GCGAGCCACGACCAGATCCTGGGGTCGATCCAGTCGGCCGTGAACGCGCAGGCGAGCGGCGACATCATGGCGCTGACAGC
CGGCGCGGCGACGGCGCTGCGCGGGGCCGCCATGCTGCGTGCCAGGCTCCACAAGGAGATCCAGGCCACCGCCCTGCCCG
GGGACGCCGGCAGGGCGGCCTCGGAGCGGGACATCTCGCCGCTCATCTTCGTGTCCAGAGGCGGCGAGCTCCTCAAGCGC
ACGAGGCAGGGTACGTCGTGCCACTCCGATCGTATCCGTCCGTGGATGATCGACCACCGGCCAAGAATCCATTACCGTAC
TCTGACACGAGTGCATGCATGTTTTGATCACAGGTATACTCCATTGGAAGCTTGTGACGGCTTACATAGACCCCAACTTC
CAGGTGATCATCAAGATGAAGAGCGCGCACATGGCGGGCACGTTCATCAAGACCAAGAAGTGTAAGCAAATTACT-----
--------------------------------------------------------------------------------
--------------AGTACTTCTGAATCCACTAGCGTGGTGGTACGTACGTGGACAGGCTCTGTAACTGTGACGTGTTTT
GCTC-------------ATTCAGGTGTTGTGGCGGACGTCCGGGCGGAGGTGGCGGCGTGGGCGGGCAGGGAGGTGGAGG
AGGGGGCCCGGCGGAGGGGCTACTTCGGGGTGCGGACGGAGGAGCGGATGATCGAGTTCGAGTGCCGGAGCAGGCAGGAG
CAGCACAAGTGGGTGCAGGGCATCACCGAGATGCTCAACCGCCGCGACAACATGAACATGAACATCACCCACCTTGT---
AAACTAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr3D_1_TraesCS3D01G163000
CAGAGACGCTCTTCCCGCCACGTTTCTCATCAAAATGTTGGGAGTTAGACCCTCTCAAAGAGTATCTCTCATATATTTTC
ATACCTACGAAACAAATAGATGGCCATATAACCAACAACCCCCAAATCCTCTTTCATCGCTCAGGCAAATAAGATGTGGC
TTTTACACAAATTACTAGAA-GGTCATGGGGCCGGC--------------------------------------------
--------------------------------------------------------------------------------
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-----GTATCCACTTTCTAAAACTAGCAACATATTTCTAAGTTAATGAAAAATCATCAGTCTTCAATGTATTTTGT----
-------------GTATGTGTCTAAGTCATACCCCGATATTTTTCAAGGAAAAAAA--CTTATAATATGAAATGCAGCAT
ATCAGGTG-----TTCTGTCAAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TAAGTGACCACTCGCACACCTAGCTAAGCTGGCTATCTTGCTCAAACATTAATCTGAA
ATGTGAGATCAAAACAACACTTGTGCTCTCATTCCAAATATCAAGAGACACCAGGGGCTCCACAAGAGAGCAGATTGCCA
AAAGATACTCTACTCAGCCGCAGTGCTGCCAAAAGCAACATTTTGAGCACTTTTATGGAGGCTTTAGTTAGCACCCACTA
TCAGCATGAGCCCCTCTAAGCACTGTTAATTAACAGCACTTCAT---GCTTTGTCTTTTCCTGGCTCCCATATATAGGAC
AAGCCTGACAGTGTCATCCCTGTGTACTTGACTGAACTCTCAGTTGCTTATGTCAGATAGTGAGCACTCTGCCGGTCAAG
CTCACTCTCAGCTCTAAGTTGTGTATCGCAGTTGCTTATGTCAGATAGTTAATACTCCAAGTTGTGTGTCTAGTTGATGC
TGATTGAGCTTTGTCCTAGCATCAAGCTCACTCTCAGCTCTA-------------CTCTCGTGTGTACGTGCCCAAAATT
CATGTGATTCTCAGCTGCAATCATGAGATACTAACTGCTGACATTTTTAAGCTGTAGAATGTTCGAATGT----TTGACT
TTGTGTAGTTTTGTTCAATACGAGTAACATTTACCTCCTGACTCTGTCAGGCAATGGAGGAATGCCTTGATCAGCAGCAG
CAGCAGAAGAAGAACAG---CAATGGCCAGCTCCAGAGGCTCGAGGGCATCGAGGAGGAAGGCGGCCCGGCCCCGGCGGA
GAAGTGGCCTCCGACGACGGTGCGGGCGCCGGAGACCCCGACGGAGACGATGGAGTTCCTCGCAAGGTCCTGGAGCCTTT
CGGCCGCGGAGATATCCAAGGCGCTCAAGGTCCTGAGCAGCAAGGGCGTCTGCGACATCCCCGACGTGGGCGTCGTCGCG
GGCGCAGGTAAAGAGCAGAGGT---CGCCACCGCCGCCACTTGACGCGACAATGGCGGCGGCGCAGGCA-----------
----GGAGGAGGAGTGGCGAGCCCGCCGTTCTCTCCCAGGGCGGGCACCATGGACGCGCAGCTCCTTCGAGCCGCGGCCG
CCGCGGGGAGGGCAGGG---GGCAAGACGACGATGGGCGCGTGGATCAAGGAGCAGAAGGAGAAGAAGCGCGCCGAGGCC
CGGTCCCGCAACGCGCAGGCCTACGCGGCGACGTCCGTGGCCGGGGTCGCGGCGGCGGTGGCCGCGCTGGTCGCCGGCGC
GGTGTTCTCGTCCTCGCC---------------TCCTGCCCCCGCCGCGGCGCCGGAGCGCGGCCCGAGGGGCGACGGCG
GGGCGAAGACGGCGGCGGCCATCGCGTCGGCGGCGGCGCTGGTGGCGTCGCACTGCGTGGAGATGGCGCAGGCGATGGGC
GCGAGCCACGACCAGATCCTGGGGTCGATCCAGTCGGCCGTGAACGCGCAGGCGAGCGGCGACATCATGGCGCTGACAGC
CGGCGCGGCGACGGCGCTGCGCGGGGCCGCCATGCTGCGTGCCAGGCTCCACAAGGAGATCCAGGCCACCGCCCTGCCCG
GGGACGCCGGCAGGGCGGCCTCGGAGCGGGACATCTCGCCGCTCATCTTCGTGTCCAGAGGCGGCGAGCTCCTCAAGCGC
ACGAGGCAGGGTACGTCGTGCCACTCCGATCGTATCCGTCCGTGGATGATCGACCACCGGCCAAGAATCCATTACCGTAC
TCTGACACGAGTGCATGCATGTTTTGATCACAGGTATACTCCATTGGAAGCTTGTGACGGCTTACATAGACCCCAACTTC
CAGGTGATCATCAAGATGAAGAGCGCGCACATGGCGGGCACGTTCATCAAGACCAAGAAGTGTAAGCAAATTACT-----
--------------------------------------------------------------------------------
--------------AGTACTTCTGAATCCACTAGCGTGGTGGTACGTACGTGGACAGGCTCTGTAACTGTGACGTGTTTT
GCTC-------------ATTCAGGTGTTGTGGCGGACGTCCGGGCGGAGGTGGCGGCGTGGGCGGGCAGGGAGGTGGAGG
AGGGGGCCCGGCGGAGGGGCTACTTCGGGGTGCGGACGGAGGAGCGGATGATCGAGTTCGAGTGCCGGAGCAGGCAGGAG
CAGCACAAGTGGGTGCAGGGCATCACCGAGATGCTCAACCGCCGCGACAACATGAACATGAACATCACCCACCTTGT---
AAACTAAATCAGTCAGATGCCATGGAAATGCAGCACTCAGTCGGTGCTATTCTGGTTTCGTGTGGTCGATCACATCTGCA
TGTATATATGTTACTCCTTGTGATTCAGCACCA-GCTTTGGTTGAATCGAACGAACTTTGGATGCGAGT-------ACTA
CTGTTCTGTGAACGCCACGAGTCCCCACTCTGCTCGTAGTTGAGTTGTAGCTA----GGGGCGGGGCGCTCTCCTCTGTT
TTCCCAAGTCCCAGGCTCCCAGAAA---------------------------CCGCCGCCGTCGCAGCGCCTCATCCTGT
AGCCG-----------CCTCCGCGTGTCATGTTCGCGCACGGCTCTCTCGCGAGGTAGGAGCAGTACT------ACTCCA
TGCCATTGAATCGCTGTTA--TACTACAGTACTTTTTTGCGCACCAGACGGCAGAAAGGAAATCCCTGAACTTTTCCTCT
CCGAATCGAAACACGAGAGGGCACCGGAATCCTTCCGGTCTCCGGCGGCGGCTCGCCCTA----------------AAAT
TTACTCGCGCGGCGATCTCCTGCATCCTAACGCCACGCCGCCCCCCTC-TTTTCTTGCTTGCTAGGTTTAGCCGGCTTGC
TCGAACCCGAAGGCCCCCGCTCGTCGCGGCCTCCCCGCTCCGCTACCTCCAGGTTACAATTCCTACTATGATGTT---AA
GCTTCTGTGATTTGCCCCTCATGAATTTCGGTCCCCTT--TATATTGTCAAAAAGAATCAAGTCATTTGTATGTTTCTAC
CTGTTCTTCCCCCCTGCTTGTGGCTTGTGCCCTTCAGCATTAACATAAGTTGTAGCTGCCTCGTACGTACTACAGTACGA
TGTTTATATGCCGGTGCTTTGGCTTGCAGGGATCAGTCGGTCCAAATAATTTGCCCTCCTCTGTCATGGAACGGGCGCAG
GGAGCTTCAAATAATGCGGCGAAACACAGGAAAACTAATCCACCTCTGCAGACATGGAGGCCAGTCTCGACACAAGCATC
TCCCCGGGAAGGTATTTGCTACCTGATTCCGTACCTTCAACTAAAAC
>chr3A_1
CAGAAACGCTCTTCCCGCCATGTTTCTCATCAAAATGTTGGGAGTTAGACCC-------GAGTATCTCTCCTATATTTTC
ATGCCTACGAACCAAATAGATGGCTATATAACCAACAACCCCCAAATCCTCTTTCGTTTCTCAAGCAAATAAGATGTGGC
TTTTACACAAATTACTAGAA-GTCCATGGGTCAGGTGAAGTCCATGGGTCAGGGGTTTTTTACCACGAAATCTGTTTATG
AGTGGTTAGAAAAAGATTTGTCAGGACCTGACTACAAGTTGATCTGGAAAGCTAGGATTCCTTTGAAAATTAAAATCTTC
CTCTGGCAGCTGTTTCAGAATGCCATCCCTACTAGGGACAACTTGCGGAAAAGGAACTGGCCCGGGAACCCAACATGTTC
ATTTTGCCATGATATTGAATCTGCGGATCATCTTTTCTTTGGGTGTGTGTTTGCTCGGTCTGTTTGGGGGGCGATTGGGT
CAGCCCTGGGAGCATCCTGCACTCCTAAAACCATTTGGCAAAGTTGGGCATGGCTCTATAAATATCTTCCTGGTGGTAAA
AAGCATTACATGACTATTGTTGCTGCTGTCTGTTGGGGCATTTGGTGCACTCGTAACAGGGTAACGTTTGACAAATGTAT
CATTCGCTCCCCGTTGGAGGCTGTTTTCACTGCATGCTCTTTTTTGATGTATTGGTCAGGTCTGCTGAAAGGGATCGACA
AGGAAAACGTCCAGGCTGGAGTGCAGAAGATGGTGCGCGCGGCTGCTTCGTTGGCGGATCGTTCTGCTACCAGGGGGAGG
CTCATGCTGGGAAATGGTGCTTGAAGTTGTTCTGCCCAGTAGACTTAGAAGTTTGTGATCTCACTGGGGTTTGATGCCCG
CTGAGATGTTCGGTGGTTCCTTTTGGTGGTGGTGTCCCGTACTTGGCTTCCTGGTTTCGTGGGATGTTCGTTTCGTGCTG
TTCGCTTTGAGGATGGGATGGTTGGTGTCAACAGGTTTTTGCCCCGTGGTGGATGACTCATTTTAGAGTCATTTGTTGCG
GGTTTCCTGTTGATGCTCCAACTCGCTCTCCCCTTTCGGTCTCCTTTTGCTTAGTCGTTTTCTAGTAGCCCAATGGGCGA
TGGCTGTAAAAACTACTGAGACTGCTGTATTTCCGTTAAGCAATTAATGGAAAGGGGTGTGAGCCCGGTTGGAAAAAAAA
AAGGTGTATCCACTTTCTAAAACTAGCAACATATTTCTAAGTTAATGAAAAATTATCAGTCTTCAATGTATTTTGT----
-------------GTATGTGTCTAAGCCATACTCCGATATTTCTCAAGAAAAAGAA--CTTATAATATGACATGCAGCAT
ATCAGTGTGGATATTCTGTCAAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TAAGTGACCACTCACACACCTAGCTTAGTTCTCTATCCTGCTCAAACGTTAATGTGAA
ATGTGAGATCAAAACAACACTTGTGCTCTCATTCCAAATATCAACAGACACCAGGGGCTCCACAAGAGAGCAGATTGCCA
AAAGAAACTCTACTCTGCCGCAGTGCTGCCAAAAGCAACATTTTGAGCACTTTTATGGAGGCTTTAGTTAGCACCCACTA
TCAGCATGAGCCCCTCTAAGCACTGTTAAGTAACAGCACTTCATCACGCTTTGTCTTTTCCTGGCTTCCATATATGGGAC
AAGCCTGACAGTGTCATCCGTGTGTGCTTGACTGAACTCTCAATTGCTTATGTCAGATAGTGAGTACTCTGCCGGTCAAG
CTCACTCTCAGCTCTAAGTTGTGTATCTCAGTTGCTTATGTCAGACAGTTAATACTCCAAGTTGTGTATCTAGTTGGTAC
TAATTGAGCTTTGTCCTAGCATCAAGCTCACTCTCAGCTCTACTCTGCCGCCGATCTCTCGTTTGTACGTGCCCAAAATT
CATGTGATTCAAAA------------------------------TTTTAATCTGTGGAATGTTCGAACATGTTGTTGACT
TTGTGTAATTTTGTTCAGTACGAGTAACATTTACCTCCTGACTCTCTCAGGCAATGGAGGAATGCCTTGATCAGCAGCAG
CAGAAGAAGAG---CAG---CAATGGTCAGCTCCAGAGGCTCGAGGGCATCGAGGAGGAAGGCGGCCCGGCCCCGGCGGA
GAAGTGGCCTCCGACGACGGTGCGGGCGCCGGAGACCCCGACGGAGACCATGGAGTTCCTCGCAAGGTCCTGGAGCCTTT
CGGCCGCGGAGATATCCAAGGCGCTCAAGGTCCTGAGCAGCAAGGGCGTCTGCGACATCCCCGACGTGGGCGTCGTCGCG
GGCGCAGGTAAAGAGCAGAGGT---CGCCGCCGCCGCCAGTTGACGCGGCAATGGCGGTGTCGCAGGCAGGCGACGGCGG
TGTGGGAGGAGGAGTGACGAGCCCGCCGTTCTCTCCCAGGGCCGGTAGCATGGACGCGCAGCTCCTCCGAGCCACCGCCG
CCGCGGGGAGGGCAGGGGGCGGCAAGACGACGATGGGCGCGTGGATCAAGGAGCAGAAGGAGAAGAAGCGCGCCGAGGCC
CGGTCCCGCAACGCGCAGGCCTACGCGGCGACGTCCGTGGCCGGGGTGGCGGCGGCGGTGGCCGCGCTGGTCGCCGGCGC
GGTGTTCTCGTCCTCACCCGCCCCTCCTCCTCCTCCCCCCGCCA---------------------CGAGGGGCGACGGCG
GGGCGAAGACGGCGGCGGCCATCGCGTCGGCGGCGGCGCTGGTGGCGTCGCACTGCGTGGAGATGGCGCAGGCGATGGGC
GCGAGCCACGACCAGATCCTGGGGTCGATCCAGTCGGCCGTGAACGCGCAGGCGAGCGGCGACATCATGGCGCTGACCGC
CGGCGCGGCGACGGCGCTGCGCGGGGCCGCCATGCTGCGGGCCAGGCTCCACAAGGAGATCCAGGCCACCGCCCTGCCCG
GGGACGCCGGCAGGGCGGCCCCGGAGCGGGACATCTCGCCGCTCATCTTCGTGTCCAGAGGCGGCGAGCTGCTCAAGCGC
ACGAGGCAGGGTACGTCATACTACTTCAA---------TCCGTGCATGATCGTTGGACAAAAATCCAGAGAGCTGACATG
ACATGCACGTATGTGTTG------------CAGGGATACTCCACTGGAAGCTTGTGACGGCGTACATAGACCCCAACTTC
CAGGTGATCATCAAGATGAAGAGCGCGCACATGGCGGGCACGTTCATCAAGACCAAGAAGTGTAAGCAGCACTCT-----
--------------------------------------------------------------------------------
-------------------TTCTGAATCCACTTCAGTAGTAGTACA----TGTATCACAGTCTCTAATATAACTCTGTAC
GTACGTCCTGGATTTTGTTTCAGGTGTTGTGGTGGGCGTCCGGGCGGAGGTGGCGGCGTGGGCGGGGAGGGAGGTGGAGG
AGGGGGGCCGGCGGAGGGGCTACTTCGGGGTGCGGACGGAGGAGCGGGTGATCGAGTTCGAGTGCCGGAGCAGGCAGGAG
CAGCACAGGTGGGTGCAGGGCATCACCGAGATGCTCAACCGCCGCGACAACATGAACATGAACATCACCCACCTTGTTGT
AAACTAAATCAGTCGAATGCCATGGAA--------CTCAGTCGGTGCTATTCTGGTTTCGTGTGATCGATCACATCTGC-
---ATGTATGTATATACTTGTGATTCAGTATTCTGCTGTTGCTGAACTGAACGAGCTCTGGTCTGGTCTGGATGCGACTA
GTGTTCTGTGAAGGCCACGAATCCCCCGACTC----CTCACCCTGTCTAGTATAGCCGGGGAAGGGCACTCTCCTCTGTT
TTTCCCTCCCAAGTCCCAGCAACGAGGGCACGGGCACTCGCCGGCGCCGCCGCCGCCGCCGCCGCAGCGCGTCATCCTCT
TCCTCTCCCT------CCTCCGCGTGTCATGTTCGCGCACGGCTCTCTCGCGAGGTA-----------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr3B_65
----------------------------------------------------------------TCTCTCCTATATTTTC
ATGCCCACGAACCAAGTAGATTGGTATATAACCCACAACCCTCAAATCCTCTTCTGTCGCTCAAGCAAATAAGATGTGGC
TTTTACACAAATCACTAGAATGGTCATGGGCTTCGT--------------------------------------------
--------------------------------------------------------------------------------
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----TGTATCCACTTTCTAAAACTAGCAATGTATTTCTAAGTTAATGAAGAACTCTCGATCTTCAATGGATTTTGTCACT
TTTGTGTAAGTCTGTATGTGTCTAAGTCATACTCCGATATTTCTCAAGAAAAAAAAACCTTATAATATGAAATGCAGCAT
ATCAGCTG-----TTCTGTCAACTAAGGGCATGTACAATGCATAGCCTCAAGGTGATGCCTCGCATGCCATGTAGGATCG
GATATGACGTAAAGTATGTTCGGTTAGGGAAGCGGGATCCTCTTCACGAGGCGGGTGCTTGAAAGAAAAAGTGTGGTCCG
GTGACAAAAGTTGAAAAGGTTGGAGTAAAAAGTAGAGATGGATGTGTGGTAGAGTCTTTATTTTTTATTTTTTTAATGAG
GCCCACTAATGGTAGCATTGGGGAGAAAAAATAAATATAGATGCCTCAAATTACTTTTTGTCACGGGGCATATTTATTCA
TATGCCACCATTGTACATGCCCTAAGTGGCCACTCACACACCTAGCTAAGCTCGCTATCTTGCTCAAACATTAATGTGAA
ATGTGAGATCAAAACAACACTTGTGCTCTCATTCCAAATATCAAGAGACGCCAGGGGCTCCACAAGAGAGCAGACTGCCA
AAAGATACTCTACTCTGCCGCAGTGCTGCCAAAAGCAACATTTTGAGCACTTTTATGGAGGCTTTAGTTAGCACCCACTA
TCAGCATGAGCCCCTCTAAGCACAGTTAATTAGCAGCACTTCATGCTGCTTTGTCTTTTCCTGGCTCCCATATATAGGAC
AAGCCTGACAGTGTCATCCGTGTGTACTTGACTGAACTCTCAGTTGCTTATGTCAGATAGTGAGCACTCTGCCGGTCAAG
CTCGCTCTCAGCTCTAAGTTGTGTATCTCAGTTGCTTATGTCAGATAGTGAGTAGTCTAAGTTGTGTATCTAGTTGATGC
TAATTGAGCTTTGTCCTAGCATCAAGCTCGCTCTCAGCTCTACTCG------------TCGTGTGTACGTGCCCAAAATT
CATTTGATTCTCAGCTGCAATCATCAGATGCTAACTGCTGACATTTTTAAGCTGTGGAATGTTCGAACATGCTGTTGACT
TTGTGTAATTTTGTTCAGTACGAGTAACATTTACCTCCTGACTCTCTCAGGCAATGGAGGAATGCCTTGATCAGCAGCAG
CAGCAGCAGAAGAAGAGCAACAATGGGCAGCTCCAGAGGCTTGAGGGCATCGAGGAGGAAGGCGGCCAGGCCCCGGCGGA
GAAGTGGCCTCCGACGACGGTGCGGGCGCCGGAGACCCCGACGGAGACCATGGAGTTCCTCGCAAGGTCCTGGAGCCTTT
CGGCCGCGGAGATATCCAAGGCGCTCAAGGTGCTGAGCAGCAAGGGCGTCTGCGACATCCCTGACGTCGGCGTCGTCGCG
GGCGCAGGTAAAGAGCAGAGACCGCCGCCGCCGCCACCACTTGACGCGACAATGGCGGCGGCGCAGGCA-----------
----GGAGGAGGAGTGGCGAGCCCGCCGTTCTCTCCCAGGGCGGGCAACATGGACGCGCAGCTCCTCCGGGCCGCCGCCG
CCGCGGGGAGGGCAGGGGGCGGCAAGACGACGATGGGCGCGTGGATCAAGGAGCAGAAGGAGAAGAAGCGCGCCGAGGCC
CGGTCCCGCAACGCGCAGGCGTACGCGGCGACGTCCGTGGCCGGGGTCGCGGCGGCGGTGGCCGCGCTGGTCGCCGGCGC
GGTGTTCTCGTCCTCGCCCGCTCCTCCTCCTCCTCCCCCCGCCGCCGCGGCGCCGGAGCGCGCCCAGAGGGGCGACGGCG
GGGCGAAGACGGCGGCGGCCATCGCGTCGGCGGCGGCGCTGGTGGCGTCGCACTGCGTGGAGATGGCGCAGGCGATGGGC
GCGAGCCACGAGCAGATCCTGGGGTCCATCCAGTCGGCCGTGAACGCGCAGTCGAGCGGCGACATCATGGCGCTGACCGC
CGGCGCGGCGACGGCGCTGCGCGGGGCCGCCATGCTGCGGGCGAGGCTCCACAAGGAGATCCAGGCCACCGCCCTGCCCG
GGGACGCCGGCAGGGCGGCGTCGGAGCGGGACATCTCGCCGCTCATCTTCGTGTCCAGAGGCGGCGAGCTCCTCAAGCGC
ACGAGGCAGGGTACGTC-----------------------CGTGGATGATCGACCACCGGCCAAGAATCCATTACCGTAC
TCTGACACGAGTGCATGCATGTTTTGATCACAGGTATCCTCCATTGGAAGCTTGTGACGGCGTACATAGACCCCAACTTC
CAGGTGGTCATCAAGATGAAGAGCGCGCACATGGCGGGAACGTTCATCAAGACCAAGAAGTGTAAGCAAGTTACTCCCTC
CGTTCGGAATTACTTGTCGTAAAAATGAATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTTCAAGACAAGTAA
TTCCGAACGGAGGGAGTACTTCTGAATCCACTAGAGTGGTGGTGCA----TGGACAAGCTCTGTAACTGCGACGTGTTTT
G------------TTTGATTCAGGTGTTGTGGTGGACGTCCGGTCGGAGGTGGCGGCGTGGGCGGGGAGGGAGGTGGAGG
AGGGTGGCCGTCGGAGGGGCTACTTCGGGGTCCGGACGGAGGAGCGGGTGATCGAGTTCGAGTGCCGGAGCAGGCAGGAG
CAGCACAAGTGGGTGCAGGGCATCACCGAGATGCTCAACCGCCGCGACAACATGAACATGAACATCACCCACCTTGT---
AAACTAAATCAGTCAGATGCCATGGAAATGCAGCACTCCGTCGGTGCTATTCTGGCTTCGTGTGATCGATCACATCTGCA
TGTATATATGTTACTCCTTGTGACTCAGTATTCTGCTTGTGTTGGAAAAAAATTCAGTACTATTCTGCTTGTGGTC----
--------TGAACGCCACGAATCCCCCGAGACTCGACTCACCGTGTATAGTATAGCTTGGGCACCTCTGTTTCC------
-------CCCAAGTCCCAGCGGCAG----------------------------CGCCGCCGCCGCAGCGCGTCGTGCTCT
CCCTCTCCCTCTCCCTCCTCCGGGTGTCATGTTCGCGCACGGCTCTCTCGCGAGGTAGGCAGGAGTACGACTCCACTCCA
TGCCATTGAATCGCTGTTTACTACCACCACTATTTTTTTGTGCACATACAGCAGAAAGGA--------AACTTTTCCCCT
CCGAATCGAAACACGAGAGGGCACCGGAATCCTTCCGGTCTCCGGCGGCGGCTCGCCCCCAACGCCACGAGGCACTAAAT
TTACTCGCGCGGCGATCTCCTGCGTCCTAACACCAAGCCGCCTCCCCCTTTTTCTTGCTTGCTAGGTTTAGCCGGCTTGC
TCGAACCCGAAGGCCCCCGCTGGTCGCTGCCTCCCCGCTCCGCTATCTCCAGGTTATAATTCCTACTGTATGATGTTAAA
GCTTCTGTGATTTGCCCCTGATGAATTTTGGTCCCCTTTATATATTGTCAAAAAGAATCGAGTGATTTGTATGTTTCTAC
CTGTTCTTCCCCCCTGCTTGTGGCTTGTGCCCTTCAGCATTAACATAAGTTGTAGCTGCCTCGTACGTACTACGGTACGA
TGTTTATATGCCGGTGCTTTGACTTGCAGGGATCAGTTGGTCCAAATAATTTGCCCTC---TGTCATGGAACGGTCGCAG
GGAGCTTCAAATAATGCGGCGAAACACAGGAAAACTAATCCACCCGTGCAGACATGGAGGCCAGTCTCAACACAAGCATC
TCCCCGGGAAGGTATTTGCTACCTGATTCTGTACCTTTAACTAAAA-
>SNPs
----S---------------S-------------------------------SSSSSSS-----------S---------
--S--------S------------S------------------------------S-------S----------------
------------------------------S-S--S--------------------------------------------
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-----------------------------------------------------S--------------------------
--------------------------------S---------S-----S-------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------S----------------S----------------------S----
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
---------------------------S---------------------------------------S------------
-S------------------------------------------------------------------------------
------------------------S----S-------------------------S-----------SS-----------
-------S---------S---------------------------S----------------------------------
--------------------------S-----------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------------S------------------S--------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------SS--S---------------------S-----------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------S-S-S---S-S-SSSSSSSSS------------------------------------------
-------------------------------------------------------------S------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
----------------------------------S----------SSSSS------S-----------------------
-SS-----------------------------S---------------------------------S-------------
------S----------------------------------------S--------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
----------------------------S-SSS------S------SS------S--------S--SS------------
S-------------------S-----SSS--SSSSSSSSSSSSSS-S---SSS---------S----S------------
--S--SSSS-SSSSS-SSS---S--------------------------------------S--------S-------S-
SS-SS------------------------------------------------------SSSSSSSSS------------
------------------S-----S--SSSSS------SSSSSS--S--S----------SSSSSSSS---------S--
----------------------------------------------------------SS--------------------
-----------------------S-------S---S------S---S---------------------------------
---------------------S-----S-----------------S----------S----------S-SSSS-S-----
-------------------S--------S------------------------------S---S----------------
-------------------------------------------------------------------------S------
---------------------S---------------S--------------------SSS-------------S-----
--------------------------------------------SS----------------------S-----------
-----------------------------S-------S--------S
>forward_1733
--------------------------------------------------------------------------------
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---------------------------------TCGCACACCTAGCTAAGCTG---------------------------
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>reverse_3728
--------------------------------------------------------------------------------
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-----------------------------------------------ACGTGGACAGGCTCTGTAAC-------------
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-----------------------------------------------
>forward_2670
--------------------------------------------------------------------------------
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----------GTAAAGAGCAGAGGTCGCCA--------------------------------------------------
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>reverse_4442
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-----------------------------------------CACCAGACGGCAGAAAGGAA-------------------
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-----------------------------------------------
