>input_sequence_50290
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----------------------------------------------------------------------ATGGCGTCGC
CCATGCTCTCCACGGCCATGGCGCCACTCCAGGCATGTCC--CATGTTCCATTCCATGCCTGCGTCCTACAGTTCTTCCC
TGTTTGTCACGCACGGTTCTGTAAGTGATTTGCGTCCA---------ACTCGAATACTCGATTCAGGGGGGCATGCTGGA
GTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTTTCCT
TCAGGACGTACGCGGTATGACATGATCGGCGGAATGTAG---CTTGCTTGGCCGCGTGCCATGGGAGCGTGTGTGCGTGA
CGCGGCGGCGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGCAAGGCGCCGACGGAGGCCAAACTCAAGGTGGCGA
TCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGATC
GCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGGA
CGTCAAGCCCGTGGGCGACAACGCCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACC
TGCCGTGGGGCGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCAT
CTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCGCCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGC
CGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGC
TCGACCAAAAGTTCGGTACGTGCCCGTCACCCCGTCCCGTCTCTCTCCCTCAACTGAATCAACTTCTTTAAGTAACTAAA
AA--TGGCGGTGGCAATGGCGCAGGCATCATCAAGGGAACCATGACCACAACCCACTCCTACACCGGCGACCAGAGGCTG
CTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGTGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAA
GGCCGTGGCGCTGGTGCTGCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCC
GTCGTCGACCTCGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAA
CGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACCA
TCGACGCGTCGCTCAG-------------------------------------------------------------CAT
GGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCG
CCGACATCGTCGCCGACCAATGGAAGTGA---------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr2A_1_TraesCS2A01G344600
TCTTGATACAATCCCTTTTTTATCTTCCTGTAGACCTTCAGAATGATTTTTTGGTTGTGCGACCCAAAGAGAATGGTGTT
TTTGGGTTGTACCAAGTCTGAAACCGAGTGGATTTATTTTTTGTCCATATTTTTCTATTCTATTTTTTATTGGGAATCAA
ATGTTAGATGGATCTACAAGCAATATTGCACCATCCATGGACAAATCTAAACAGCAGTAGGCGGTTGGATTAGCCGTCGT
GCTAATGTCATATAGCAAACATTGTCCATGAAGTACTTCCGAATAAATATTGTAAACAGAGCTGAAAAGGATGGTGTCGA
CACCCGTCCTCGTGTCTCCGCCAGAAAACAGGGGCAAGGAAAGGTGAAAAGGCCCTTTTTTGCGAATGAAATGGCTTTAT
TTCATCTGCCACTATTCAAAAATCCTCAGTTTCCTTTTTTAATAAACACAAACGTTCATATATAAATGCACACACAAACG
CTAATGACTGGAGATACCATTATCTTTCTAACCATACTGAGGACCCATTATTGAC-ATCTTCATATGGCCAGCTCACAAC
GTTCAACGTTTGTCGAGTCACCCCAGAAACTCGGATCGAAACGGTGCTCTGCTCGACGTCCACAGAACGGAACGCACATT
ATCCAGCGAGCGAGCGAGCATTACATCAACAATACAGGATGTATGTACATTGCAACAAAT--------------------
------AATCACAAAAGAACAAGAAAAAAAC---ATATGCGATCAGGCACATGACGAAGGAAGGGTCACATGAATGAAGA
AGCGAAAAGCCACATATCGACCGGAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTAT
CCAAAATCTCATCTCTCGCCCAATCCGGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCTA
ACCCGTATATACAGCCACGCCCGCCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGACCCTTTGGACATGGCGTCGC
CCATGCTCTCCACGGCCATGGCGCCACTCCAGGCATGTCC--CATGTTCCATTCCATGCCTGCGTCCTACAGTTCTTCCC
TGTTTGTCACGCACGGTTCTGTAAGTGATTTGCGTCCA---------ACTCGAATACTCGATTCAGGGGGGCATGCTGGA
GTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTTTCCT
TCAGGACGTACGCGGTATGACATGATCGGCGGAATGTAG---CTTGCTTGGCCGCGTGCCATGGGAGCGTGTGTGCGTGA
CGCGGCGGCGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGCAAGGCGCCGACGGAGGCCAAACTCAAGGTGGCGA
TCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGATC
GCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGGA
CGTCAAGCCCGTGGGCGACAACGCCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACC
TGCCGTGGGGCGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCAT
CTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCGCCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGC
CGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGC
TCGACCAAAAGTTCGGTACGTGCCCGTCACCCCGTCCCGTCTCTCTCCCTCAACTGAATCAACTTCTTTAAGTAACTAAA
AA--TGGCGGTGGCAATGGCGCAGGCATCATCAAGGGAACCATGACCACAACCCACTCCTACACCGGCGACCAGAGGCTG
CTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGTGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAA
GGCCGTGGCGCTGGTGCTGCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCC
GTCGTCGACCTCGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAA
CGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACCA
TCGACGCGTCGCTCAG-------------------------------------------------------------CAT
GGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCG
CCGACATCGTCGCCGACCAATGGAAGTGAACGCCGGACGGCGGCATTATTGCCCTGTGAAGTGACTCCTCTCGAAATTTT
CCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCGAAGTATCGAGCTCCCAACAGCTTCT-TTTTTTTC
CTTTCTTTTCTTGTTCTTCTTTTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAGG
AAGTCTCAACGCTGTGCATCTGTAATATATAC----TATCGTTTGCCAGGTTCTGATGTAGAATTCAACTTGTTCTTC--
----GAACATTTCCATCGTTTTGACCTTTACTG--CTATCTAAACATGCATGATCAACTCAGGAAGAAAAGTTTGAACCA
TACACGAAAGTTACCATAAAATG--AAAAGTTTGAACTTCTGATGGCAATTGCAAAATTAAAGGGAGCACAACCATGCAG
CCCATTATCAGAGTTTTTATTTCATTTGTGCGAAAACTCATTATCAGAGTTGTCCACACAAACTGACTCACAAGATAAGA
GATTGCGATCTGCGCGCCGAGTCTAGGTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGGT
CGTATTTTCATTGGACATCATGGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAGT--GTGTGAGTGGT
CAAGAATACATGGAACTCATCAGGGATAGATATTGCAGACCATACAATGCACAGACCACAGAGGGTGTCTTTCCACTCTG
AAGCATTCAGATGGATCAAAACATCTCGAATCTCTATACCCAAATGGCC-------------------------------
--CGTGTTTAACTTGATAGAATCAAGATATTTAGAATTCAGAGTTGAGCTCTCTCTACTCAATGCCCCATGATAAGACAT
ACTGTATGCAGTATTTATCGATGAAATAGCAAGTACTAAGAACCATTCAAGTAAATTCTAGTAGAAGCTAACATGATATA
TTGAACTTCAACCAGGGTTCTTTGGATGACACTTCATACGCTAAGT
>chr2D_517
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------CTGACGACCCGTTATTGACAATCTTTATATGGCCAGCTCATAAC
GTTTAAC-TTTGTCGAGTCACCCCCGAAACTCCGATCGGAACGGTGCTCTGCTCGACGTCCAGAGGATGGAACGCAGAAT
ATCCAT----CGAGCGGGCATTACATCAACAATACAGGATGGATGTACATTGCAACAAAT--------------------
------AATCACAAAAGAAATAAAAAAGGAAACTATATGCGATCAGGCACATGACAAAGGAAGGGTCACATGAACGAAGA
AGAGAAAAGCCACATATCGACCGGAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTAT
CCAAAATCTCATCTCTCGCCCAATCGCGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCTA
ACTCGTATATACAGCCACGCCCGCCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGATCCTTTGGACATGGCGTCGC
CCATGCTCTCCACCGCCATGGCGCCACTCCAGGTATGTCCAC---GTTCCATTCCATGCTTGCGTCCTACAGTTCTTCCA
TGTTTGTCACGCACGGTTATGTAAGTGATTTGCGTCCA---------ACTCGATC--------CAGGGGGGCATGCTGGA
GTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCCT
TCAGGACATACGCGGTATGACATGATCGGTGGAATGTAG---CTTGCTTGGTCGCGTGCCATGGGAGCGTGTGTGCGTGA
CGCGGCGGTGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCGA
TCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGATC
GCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGGA
CGTCAAGCCCGTGGGCGACAACGCCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACC
TGCCGTGGGGCGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCAT
CTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGC
CGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGC
TCGACCAAAAGTTCGGTACGTGCCCGTCCCCTCTGTCTCTCAAGT---CTCCACTGAATCAACTTCTTTAAGTAACTAAA
AAAATGGCGGCGGCTATGGCGCAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCTA
CTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGCGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAA
GGCCGTGGCGCTGGTGCTCCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCC
GTCGTCGACCTCGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAA
CGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCCGGTGCTCCGACGTGTCCTCCACCA
TCGACGCGTCGCTCAG-------------------------------------------------------------CAT
GGTCATGGGCGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCG
CCGACATCGTCGCCAACCAATGGAAGTGAACGCCGGACGGCGGCGGCATTGCCCTGTGAAGTGACTCCTCTCGAAATTTT
CCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCAGAGTATCGAGCTCCCAACAGCTTCTTTTTTTTTC
CTTTCTTTTCTTGTTCTTCTTTTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAGG
AAGTCTCAACGCTGTGCATCTGTAATATATACGTACTATCGTTTGCCAGGTTCTGATGTAGAATTCAACTTGTTCTTC--
----GAACATTTCCATCGTTTTGACCTTTACTG--CTATCTAAACATGCATGATCAACTCAGAAAGAAAAGTTTGAACCA
TACACGAAAGTTACCATAAAATG--AAAAGTTTGAACTTCTGATGGGAATTGCAAAATTTAAGGGAGCACAACCATGCAG
CCCATTATCAGAGTTTTTATGTTATTTTTGCGAAAACTCATTATCAGAGTTATCCACACAAATTGATTCACAAGATAAGA
GATTGCGATCTGCG-----AACCTAGGTGGATGATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGGT
CGTATTTTCGTTGGACATCATGGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAGAGCGTGTGAGTGGT
CAAGAATATATGGAAATCATGAGGGATAAATATTGCTGACCATACAATGCACAGACCACAG-GGGTGTCGTTCCGCTCTG
AAGCACTCAAATGGATCAAAACATCTCGAATCTCTATACCCAAATGGCC-------------------------------
--CGTGTCTAACTTAATAGAATCAAGATATTTAGAATTCAGAGTTGAGCTCTCTCTACTCAATGCCCCATGATGAGACAT
A-----TGCAGTCTTTATCGATGAAATAGCAAGTACTAAGAACCATTCAAGTAAATTCTAGTACAAGCTAACATGATATA
TTGAACTTCAACCAGGGTTCTTCGGATGACACTAAATACACTAAGT
>chr2B_558
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
GTTTAAC-TTTGTGGAGTCACCCCCGAAACCCCGATCGGAACGGTGCTCTGCTCGACGTCCCGAGGATGGAACGCAGAAT
ATCCAT----CGAGCGAGCATTACATCAACAATACACGATGTATGTACATTGCAACAATAATCACAAAATCCTCGAAAGA
AAAAAAAATCACAAAAGAACAAGAAAAAAAC---ATATGCGATCAGGCACATGACGAAGGAAGGGTCGCATGAATGAAGA
AGAGAAAAGCCACATATCGACCGGAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTAT
CCAAAATCTCATCTATCGCCCAATCGCGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCTA
ACTCGTATATACAGCCACGCCCGCCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGATCCTTTGGACATGGCGTCGC
CCATGCTCTCCACGGCCATGGCGCCACTCCAGGTATGCTGTTCATGTTCCATTCCATGCTTGCGTTGCGTACTGCTTCCC
TGTTTGTCACGCACGGTTATGTAACTGGACTGCCATCATCTGTGATTACTCGATC--------CAGGGGGGCATGCTGGA
GTTCTCCGGGCTGAGGAGCTCGTCGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCCT
TCAGGACATACGCGGTATGACATGATCGGTGGAATGTAGTTGCTTGCTTGGTCGCATGCCATGGGAGCGTGTGT--GTGA
CGCGGCGGTGCTGTGCTTGCAGGTGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCGA
TCAACGGGTTCGGGCGCATCGGGCGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTCATC
GCCATCAACGACACCGGAGGCGTGAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTCGGCATCTTCGACGCGGA
CGTCAAGCCCGTGGGCGACAACGCCATCTCCGTCGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACC
TGCCGTGGGGTGAGATGGGCATCGACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCAT
CTCGAGGCCGGCGCCAAGAAGGTGCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGC
CGACCTCTACACCCACGCCGACACCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGC
TCGACCAAAAGTTCGGTACGTGCCCGTCCCCTCTGTCTCTCAAGT---CTCAGCTGAATCTACTTCTTTGAGTAACT-AA
AAAATGGAGGTGGCAATGGCGCAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCTG
CTGGACGCGAGCCACCGCGACCTGCGCCGTGCCCGCGCCGCGGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAA
GGCCGTGGCGCTGGTGCTGCCCAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCC
GTGGTCGACCTTGTGGTGCAGGTCTCCAAGAAGACCCTCGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAA
CGAGCTCAAGGGCATCCTCGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACCA
TCGACGCGTCGCTCAG-------------------------------------------------------------CAT
GGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACAACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCG
CCGACATCGTCGCCAACCAATGGAAGTGAACGCCGGA---CGGCGGCATTGCCCTGTGAAGTGACTCCTCTCGAAATTTT
CCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCAGAGTATCGAACTCCCAACAGCTTCT-TTTTTTTC
CTTTCTTTTCTTGTTCTTCTTTTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAGG
AAGTCTCAACGCTGTGCATCTGTAATATATAC----TATCGTTTGCCAGGTTCTGATGTAGAATTCAACTCGTTCTTGGA
TTTGGAACCTTCCCATCATTTTCACCTTTATTG--CTATCTAAAAATGCATGATCAACTCACAAAGAAAAGTTTGAACCA
TACACGAAAGTTACCATAAAATG--AAAAGTTTGAACTTCTAATGGCAATTGCAAAATTTAAGGGAGCACAACCATGCAG
CCCATTATCAGAGTTTTTATGTTATTTTTGCG-AAACTCATTATCAGAGTTATCCACACAAATTGACTCACAAGATAAGA
GATTGCGATCTGTGCGTCAAACCTAGGTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGGT
TGTATTTTCGTCGGACATCATGGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAAAGTGTGTGAGTGGT
CAAGAATATATGGAAATCTTGAGGGATAAATATTGCAGACCATACGG---ACAGACCACAG-GGGTGTCTTTCCGCTCTG
AAGCACTCAAA---------------------------------TGGCC-------------------------------
--CGTGTCTAACTTAATAGAATCAAGATATTTAGAATTCAGAGTTGAGCTCTCTCTACTCAATGCCCCATGATGAGATAT
A-----TGCAGTCTTTATCGATGAAATAGCAAGTACTAAGAACCATTCAAGTAAATTCTAGTGCAAGCTAACATGATATA
TTGAACTTCAACCAGGGTTATTTGGATGACACTACATACGCTAAGT
>chr2D_2152
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-------------------------------------CTCAACGGGAT--CGCTCCGGGTGCCCACCCCCAAACGTATCC
GTGGTCGACCTCGCGGTGCAGGTCTCCAAGAAGACCCTCGACGAGGAGGTGAACCAGGCGTTCCACGACGGCGCGGCCAA
CGAGCTCAATGCCTTCCTCGACGCCTGCCATGAGCCGCTCGTGTCCATTGATTTCAGGTGCTCCGACGTGTCCTCCACCA
TCGACGCGTCGCTCAGCATGATCATGGGAGACGACATGGTAAGGTCATCGCATGGTACGACGAGTGGGGTCGCTCAGCAT
GGTCATGGGAGACGACATGGT-AAGGTCATCGCATGGTACGAC---GAGTGGGGTTACTCCCAGAGGGTAGTCGACCTCG
CCGACACCATCGCCAACCAATGGAAGTGAACGCCG-----------CATTGCCCTGTGAAGTGACTCCTCA--AAATTTT
CCCCAGCCATCGTCACGGATGATCGATTCTTTGTAATGAGAATTCAAAGTGTCAAGCTCCCAACAGCTTCT-T-------
CTTTCTTTTGTT----TTCTTCTTTCTTTCTCTGATTTT-----------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr2D_2698
CAACGCACGAGCATTCTACTAG----------------------------------------------------------
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---------------------------TATAC----TATCGTTTGCCCGATTCTGATGTAGAATTCAACTCGTTCTTC--
----GAACCTTTCCATCATTTTGACCTTTTATTGTCTATCTAAACATGCATGATCAACTCAAAAAGAAAAGTTTGAACCA
TAAACGGAAGTTACCATAAAAAATAAAAAAATTGAACTTCTGATGGCAATTGCAAAATTTAAGGGAGCACAACCATGCAG
CTCATTATCAGGGTTGAT-------------------TCATTATCAGAGTTATCCACACAAACTGACTCACAAGCAAAGA
GATTGTGATCTGCGTGCCGAGCCTAGTTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAGCTTTTGTGGGT
AGTATTTTCGTTGGACATCATGGTTCACATGTTTGCCATCCTTTATATATCCTTGGTGCCAATCAGA--GTGTGAGTGGT
CAAGAATACATGGAACTCATGAGAGATGAATATTGCAGGCCATACAATGCACAGACCACAGAGGGTGTCTTTCCACTCTG
AAGCACTCAAA---------------------------------TGGATCAAAACATCTCGAATCTCTATACCCAAATGG
TTCGTGTTTAACTTAATAGAATCAAGATATTTTGAATTCAGAGTTGAGCTCTCTGTACTCAATGCCCCATGATGAGACAT
A-----TGCGGTCTTTATCAATGAAATAGCAAGTACTTCGTTCAATTCAAGTAATTTCTAG---AAGCTAACATGATATA
TTGAACTTCGACCAGGGTTCTTTGGATGACACTACATATGCCAAGT
>SNPs
SSSS-SSSS-SSSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----S--------------S--------------S---
---S---S----------------S-------S-----S-----------------------S--S-S--------S-S-
-----SSSSS----------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------------------------SS-----------------------------------------------------
--S---------------------------------------------------------S-------------------
---------------------------------S-------------------------S--------------------
------------------S----------------------------------SSSSSSSSSS-----------------
---------------------------------------------------------------------------S----
-------S---------------------S---------------------S----------------------------
--------S------------------------------------S--------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--S-SSS-SS--SSSSSSS--------------------------------
-------------------------------------------------S--------S---------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------SSS---------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------------------------------------------S--------------------
--------------------S-S----S-----------------------S----------------------------
---------------------S----------------------------------------------------------
---------S--------------------------------------------------------S-------------
--------------------S-------S---------------------------------------------------
-----S---S----------------------------------------------------------------------
--------------S----------------------------------------------------------S------
-SSSSS------S--------------------------------------------------S----------------
---------------------------------S------------
>forward_251
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-----------------------------------------------------------------------AGCCGTCGT
GCTAATGTCAT---------------------------------------------------------------------
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>reverse_1310
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-----------------------------CGGAATGTAGCTTGCTTGGC-------------------------------
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>forward_360
--------------------------------------------------------------------------------
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--------------------CCAGAAAACAGGGGCAAGGA----------------------------------------
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>reverse_1954
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---------------------------------GTCCCGTCTCTCTCCCTCAA---------------------------
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----------------------------------------------
>forward_1332
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--------------------------------CGGAATGTAGCTTGCTTGGC----------------------------
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>reverse_3020
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-----------------------------------------------------------AAAGGGAGCACAACCATGCA-
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----------------------------------------------
