>input_sequence_50267
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----------------------------------------------------------------ATGGCTAGTCCTGGCA
CATTGCTGTTGGCGACGGTGCTCGTCATCCTATCAATTTTCGTAAGCCCCATCTCCGGCTACTGGAAGCCGAGCCGCACC
CGCACCAGGCGCCCTAGCAGCCGCCGGTCCTGGTCCTCGGGCGGCGCGACGTGGTACGGGAGTCCTTACGGCGCCGGCAG
CGACGGTAAGTCTCAC-----GTACATGTTCAGAGGGTGATTGAATACGTTTTAGTGTCATGACTAAAGTAGTGGGGCTA
AAACTTGCTAGCCTTCCCCATGCTTGGATCCAAATACTAAAAAGACTAAAACAAGTTAATGAGCATTTATTATCCTCCAA
ACCCTCCAATCCAGAACTCGCCTGTGTTAAAGGAGAAGAATTAAATAAGGAGAGAGAGGACTAATCCACATTTTAGTAGG
GGTACCTCTGACTAAAAAAATTAGTCTCAAGACTAGTTTTAGCCTCTCTTTAGTCAGGGGTGCTTGAAACTTTAGCCTCT
TAAAGACACTATTTTTAGTCAGACTAAAATAAGTCCCTTGGATTCAAGCACCCTCTCAGACTGCAGAGTATACACACTTG
TCAGAGTGAGACTTACTCTTTTTCCGTGGGCGAATTGCAGGTGGCGCGTGCGGTTACCAAAGCGCCGTCGGCCAGCACCC
GTTCTCGTCGATGATCGCCGCCGGCGGACCGTCCTTCTTCAAGAGCGGCAAAGGCTGCGGTGCATGTTATCAGGT----A
CGTAGATCGGTCGGCATATATGA------TCACATTTAGGATTTAGCACTTTCATGTGAATCAGCGTGCAAAGTGGATGT
ACGTTACAGGTCAAGTGCACCGGTAACAAGGCCTGCTCCGGTCGCCCGGTGACCGTCGTCATCGCCGACAACTGCCCCGA
CGGCATATGCGCCTCGGAGGATCATTTCGACATGAGCGGCACCGCCTTCGGCGCCATGGCCAACCGAGGGATGGCCGACC
GCCTCCGCTCCGCCGGGCAGCTCAAGATCCATTACGCGAGGTGAAAAATGCATTCGATCT---CGATCTGATAATCGCAG
TCAGCTTCACGTCGACCCACATGTGTGTTAATACTGCTTACTGAAGGCGTACGTGCGTAACACTGGTTAACTAA---TTT
CCTCAGGGTGCCCTGCAAGTACAACGGCATGAACATTGTCTTCAAGGTGGACGCGGGCTCCAACCCGTTCTACCTCTCCG
TGCTGATCATGTACCAGGCCGGCGACGGAGACCTCTCTGCCGTCGACATCATGCAGGGCGGCTGCGCGCCCGGCCACCAC
AACGACCACGGCGCGCCGTGGATGGCGATGCAGCAGTCCTGGGGCGCGCTGTGGCTCCTCCAGTCGAACAACGGGAAGCC
TCTCCAAGCCCCGTTCTCGTTCCGGCTCACCTCGGGTTCCGGCAAGGTGCTCGAGGTCACCAACGCCATCCCTTCCGGCT
GGACGGCCGGCACGTCCTACAGCTCCTCGGTGAACTACGCCAGCTAG---------------------------------
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>chr2D_1_TraesCS2D01G411100
AGAAAATGTTCTAAAATTGAAAAGGTGCGAATTTCCAACCCCCTTTTTTATTTTCTTTTATTTTCGTTTAATTTTTAATT
TGTACTCATTTTAAGTTTTGTAATTTTTGGT----------------GCAATTGCACTTTTCTTATACAATTGCATACTT
TAATACACTTTTACTTTATTGATGGGACATAAAAATGACTCCAACTTCATAAAACTCGAGGGCCTCTTTGATTCGCATGA
TTCTAAATATGCGGGAATAGAAAAAAACATAGGATTTGAATGTCATGCTCATGTCAATCCTACAGGATTTTGGTTTGTTT
GATTGCATCATAGGAAAAATGAAGAATTC-TTCAAAGAGGTTTGAGC-GATGCTGGAAATCCTATGGGAAGTAGTGAAAA
GAAATCTTTTGGAAAAAATCCTATAGGATTCAATTATATGAATCAAACAACCAACATA-GAAAAAAAATCTTAGGATTCT
AATCCTTCAAAATTCCCATGAAAATCCTTTGAATCAAAGGAACCCTGAGGGTTTGCCCTCCACACGCATGGAAAGTGTTG
GAAGTGCCTGGCATGGGCCGAATGGTGCGACAATTAGGTTACCTATTGACTCAAGACGGGCCATTTGAGTGTTTGA---C
CCACGTGCACATATATGGACGCAATCACGCAACTAACCCGGCCGGATGAGTCCTCTTTACCCAAAATCTCCGGAGTTGAC
AGAGCCTTCAGCGCCATGGCTCCGTCATCACAGGATCGGCCGCTCCGTCTCAGTTGACCGCCGTGCAAGTATGTGTGCGC
A-CCTCTCCCTAAACCTCAGTAGTCGCCGCCACGTTCGCCTCCATAATTCGTGTGTGCACGACTAAACGTATTCGCTCCC
ACGTTTATAACACCT-AAACCTCCTATATATACCACCCCGAATCGCACTAGCCCTGCAAGCAACACCGAGTTCTTCGTAG
TACTACTCAACAAACCTAGCTAGCCCATTGCCTTTCTGTCTCCTGACTGATAGCTAGATCATCAATGGCTAGTCCTGGCA
CATTGCTGTTGGCGACGGTGCTCGTCATCCTATCAATTTTCGTAAGCCCCATCTCCGGCTACTGGAAGCCGAGCCGCACC
CGCACCAGGCGCCCTAGCAGCCGCCGGTCCTGGTCCTCGGGCGGCGCGACGTGGTACGGGAGTCCTTACGGCGCCGGCAG
CGACGGTAAGTCTCAC-----GTACATGTTCAGAGGGTGATTGAATACGTTTTAGTGTCATGACTAAAGTAGTGGGGCTA
AAACTTGCTAGCCTTCCCCATGCTTGGATCCAAATACTAAAAAGACTAAAACAAGTTAATGAGCATTTATTATCCTCCAA
ACCCTCCAATCCAGAACTCGCCTGTGTTAAAGGAGAAGAATTAAATAAGGAGAGAGAGGACTAATCCACATTTTAGTAGG
GGTACCTCTGACTAAAAAAATTAGTCTCAAGACTAGTTTTAGCCTCTCTTTAGTCAGGGGTGCTTGAAACTTTAGCCTCT
TAAAGACACTATTTTTAGTCAGACTAAAATAAGTCCCTTGGATTCAAGCACCCTCTCAGACTGCAGAGTATACACACTTG
TCAGAGTGAGACTTACTCTTTTTCCGTGGGCGAATTGCAGGTGGCGCGTGCGGTTACCAAAGCGCCGTCGGCCAGCACCC
GTTCTCGTCGATGATCGCCGCCGGCGGACCGTCCTTCTTCAAGAGCGGCAAAGGCTGCGGTGCATGTTATCAGGT----A
CGTAGATCGGTCGGCATATATGA------TCACATTTAGGATTTAGCACTTTCATGTGAATCAGCGTGCAAAGTGGATGT
ACGTTACAGGTCAAGTGCACCGGTAACAAGGCCTGCTCCGGTCGCCCGGTGACCGTCGTCATCGCCGACAACTGCCCCGA
CGGCATATGCGCCTCGGAGGATCATTTCGACATGAGCGGCACCGCCTTCGGCGCCATGGCCAACCGAGGGATGGCCGACC
GCCTCCGCTCCGCCGGGCAGCTCAAGATCCATTACGCGAGGTGAAAAATGCATTCGATCT---CGATCTGATAATCGCAG
TCAGCTTCACGTCGACCCACATGTGTGTTAATACTGCTTACTGAAGGCGTACGTGCGTAACACTGGTTAACTAA---TTT
CCTCAGGGTGCCCTGCAAGTACAACGGCATGAACATTGTCTTCAAGGTGGACGCGGGCTCCAACCCGTTCTACCTCTCCG
TGCTGATCATGTACCAGGCCGGCGACGGAGACCTCTCTGCCGTCGACATCATGCAGGGCGGCTGCGCGCCCGGCCACCAC
AACGACCACGGCGCGCCGTGGATGGCGATGCAGCAGTCCTGGGGCGCGCTGTGGCTCCTCCAGTCGAACAACGGGAAGCC
TCTCCAAGCCCCGTTCTCGTTCCGGCTCACCTCGGGTTCCGGCAAGGTGCTCGAGGTCACCAACGCCATCCCTTCCGGCT
GGACGGCCGGCACGTCCTACAGCTCCTCGGTGAACTACGCCAGCTAGGGTGGCTGGCGCGGAGTGTATGCTTTAGATCTG
GTTCTGCAATTTGTGAGCTTTTACCTTGTCA-AGGCCGGTATCCGGTAATCGGCATGCATGCGCGTCCGGGAATTGTGAG
CGGCCGCGTCAGAAGAGGAAGAAAGTCAAGTGTTTCTGTGTTGTGTTCTTTGCTCTTCCCTCTCCGAGGCC-CTGCCTTG
CAGTTGTTTCCCTAGTGATGTCTTTTTCTTGAGCTGTAGTGATGCAGCAATAGATGCGATGTTTCTTGGGTCCATTTATC
GCTCAGGCTTTGGCTTGGGGGTGCTGAAACTTGGTATAAGAAAGTGGCCACGAAATCAGAAAAA-AAGAACTTGTTAACT
AAAAGCTAAAAATATGCAAAAGCTGGTTGGACAAACGGGATCATGAACGTTCGCCATAATGCCAAATACATCAAAAATAG
ACATTTTAGTAGATTTTACTTGGATTCTGAACTAGAGGAA---AATAAATAGACAAAAGGAGGAAAGATAATACAAATAA
TGACAAAAAAAAATCCACTTGTGCAGAAGTAAATATT-AACGCATTCGCAAATCACAGAGCATGACTAGGCACATAACCT
CTCTTTACTAAATATTTACATTGTCAACCTAAGTTACATCTTGGTAATGTGCAAACTAGAAAATATTTGACTACATGCAA
ATAAATTTTAAACCTATTTGTAAGTTGTCCAAGAATTGTTTCAAATCCTCAACCACCTGAGGCTTCGAATCATATCCAGC
CACTCTTATGTCCATTTGGGATGCGTTTGGTAGGTTGTATCCTTTTTGGGCTATTTTCATCTATGGCTAAGTTGGTTATG
GTTGAGTGAATACAAACACACAAA--AAA-TCATGTTTCACACATAGTTTGGCTATCTGCG---TTGCACCAGTGAACAA
TTTTATGACAAGTGTTTTGTTGGCAGGAGTTTTGGATTATGGTTGTCAACATGCAAAACATGATGCTTTGTTGTGCATGA
CCTATGTTGTGGTCACCCTT------------------------------------------------------------
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>chr2A_1
AGAAAATGTTCTAAAATTGAAAAGGTGTGTATTTTCCGACCCC-TTTTTGTTTACTCTAATTTTCGTTTAGTTTTGAATT
TGTGTTGCTTTTAAGTTTTGTATTTTTGTTGCAGTTGCACTTTTTCCGCAATTGCACTTTTCTTACATAATTGCATATTT
TAATACACTTGTACTTTACTGATGGGACATAAAAATGACTCCAACTTCATAAAACTTGAAGGCCTCTTTGATTGGCATGA
TTCTAAAAATGCAGGAATAGG-AAAAACATAGGGTTAGAACGTCATGCTCATGTCAGTCCTATAGGATTTCGGTTTGTTT
GGCACCATCGTAGGAAAAATGAAGAATTCATTCAAAGAGGTTTGATTGGATGCTGGAAATCCTATGGGAAGTAGTTAAAA
GAAATGCTTAGGAAAAATTCCTATAGGATTCAATCATATGAATCAAACAATCAATATAGGAAAAAAAATATTTGGATTCT
AATCCTCCAAAATTCCTATGAAAATTCTTTGAATCAAAGGAGCCCTGAGGGTTTGCCCTC--CACGCATGGAAAGTATTC
AAAATGCCTAGCATGGGCCGAATGGTGCAACAATTAGGTT----------------------------------------
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>chr2A_586
ATTGGCT-------------------------------------------------------------------------
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---------------------------------------------------CAAGATGGGCCGTTTGAGTGTTTGACCCC
CCACGTGCACATATATGGACGCAATCACGCAACTAACCCGGCCGGATGAGTCCTCTTTACCCAAAATCTCCG--------
------------------------TCATCACAGGATCCGCCGCTCCGGCTCAGTTGACCCCGGTGCATGCATGTATGCGC
ACCCTCTCCCTAAACCTCAGTAGTCGCCGCCACGTTCGCCTCCATAATTCGTGTGTGCACGACTAAACGTATTCGCTCCC
ACGTTTATAACTCCTAAACCCTCCTATATATACCACCCCTAATCGCACTAGTCCTGCAAGCAACACCGAGTTCTTCGTAG
TACCACTCAACAAACCTAGCTAGCCCCTTGGTTTTCTGTCTCCTGACTGAGAAA---ATCATCAATGGCTAGTCCAGGCA
CATTGCTGCTGGCGACGGTGCTCGTCATCCTATCAATTTTCGTAAGCCCCATCTCCGGCTACTGGAAGCCGAGCCGCACC
CGCACCAGGCGCCCTAGCAGCCGCCGGTCCTGGTCCTCCGGCGGCGCGACGTGGTACGGCAGCCCCTACGGCGCCGGCAG
CGACGGTAAGTCTCTC-----GTACATGTA--------------------------------------------------
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---------------------------------------------------------------CAGAGTATAAACACTTG
TCGGACTGAGACTTACTCTTTTTCCGTGGGCGAAATGCAGGTGGCGCGTGCGGCTATCAAAGAGCCGTCGGCCAGCACCC
GTTCTCGTCGATGATCGCCGCCGGCGGGCCCTCCTTCTTCAAGAGCGGCAAAGGCTGCGGTTCATGTTATCAGGTACGCA
CGTAGATCGGTCGGCATATATGA------TCACATTTAGGATTTAGCAATTTCATGTGAATCAGCGTGCAAAGTGGATGT
ACGTTACAGGTCAAGTGCACCGGTAACAAGGCCTGCTCCGGCCGCCCGGTGACCGTCGTCATCGCCGACAACTGCCCCGA
CGGTATATGCGCCTCGGAGGATCATTTCGACATGAGCGGCACCGCCTTCGGCGCCATGGCCAACCGAGGGATGGCCGACC
GCCTCCGCTCCGCTGGACAGCTCAAGATCCACTACGCGAGGTGAAAATGC------ATTTTTTTGACCTGACAATCCTAG
AGTG------------------------------TGTTTACCGAAGGCGTGCGTGCGTAACACTGGTCAGTTAA---TTT
CCTCAGGGTGCCCTGCAACTACAACGGCATGAACATTGTCTTCAAGGTGGACGCGGGCTCCAACCCCTTCTACCTCTCCG
TGCTGATCATGTACCAGGCCGGCGACGGAGACCTCTCTGCCGTCGACATCATGCAGGGCGGCTGCGCGCCCGGCCACCAC
AACGACCACGGCGCGCCGTGGATGGCGATGACGCAGTCGTGGGGCGCGCTGTGGCTCCTCCAGTCGAACAACGGGAAGCC
TCTCCAAGCCCCGTTCTCGTTCCGGCTCACCTCGGGTTCCGGCAAGGTCCTCGAGGTCACCAACGCCATCCCTTCCGGCT
GGTCGGCCGGCACGTCCTACAGCTCCTCGGCGAACTACGCCAGTTAGGGCGGTTGGCGCCGACTGTATGCTTTAGATCTC
GTTCTGCAATTTGTGAGCTTTTACCTTGTCAAAGGCCGGTATCCGGTAATCGGCATGCATGCGCGTCCGGGAATTGTGAG
CGGCCGCGTCAGAAGAGGAAGAAAGTCAAGTGTTCTTGTGTTGTGTTCTTTGCTCTTCCCTCTCCGAGGCCACTGCCTTG
CAGTTGTTT-CCTAGTGATGTCTTCTTCTTGAGTTGTACTGATGCAGCAATAGATGCGATGTTTCTTGGGTCCATTTATC
GCCCAGGCTATGG-TTTGGGGTGCTGAAACTTGGTATACGAAAATGGCCACAAAATCAGAAGAA-AAGAACTTGTTAACT
AAAAGCGGAAAATATGCAAAAGCTGGTTGGACAAACGGGATCATGAACGTTCGCCGTAATGCCAAATACATCAAAAATAG
ACATTTTAGTATATTTTACTTGCATTCTGAACTAGAGGAA---AA---ATAGACAAAAGGAGGAAAGATAACACAAATAA
TGACAAAA-AAATTGCACTTGTGCAGAAGTA-ATATTTAACACATTCGCAAATCACAGAGCATGACTAGGCACATAACCC
CACTTCACTAAATATTTGCATTCTCAACCAAAGTTACATCTTGGTAATGTGCAAACTAGAAAATATTTGACTGCATGCAA
ATAAATTTTTAACCTATTTGTAAGTTGTCCAAGAATTGTTTGAAATCCTCAACCACTCGAGGCTTTGAATCACATCCAGC
CACTCTTATGTCCATTTAGGATGCGTTTGGTAGGTTGCATCCTTTTTGGGCTATTTGCATCTGTGACTAAGGTGGGTCTG
GTTGAGTGAATACAACCAAAATAAATAAA-TCATGTTTCACACATAGTTTGGCTATCTGCAATATTGCACCATTGAGCAA
TTTTATGACAAGTTTTCGGTTGGCGGGAGTTCTGGATTATGGTTGTCAATGTGCAAAACATGATGCTTGGTTGTGCACGA
CCTATGTTGTGGTCACCCTTCTCACTAGTGGTGACATTACCATACATTACACTACATATGCAATATGAAATAAACATCGT
TTTAGTCATAACTAGTAATGAAATAGCAGTTCATCCTAACTACTAACAAATTGCAGTGCAAATTAATAGTCATATGGCTC
AGTAGGGGAAAGTTCGTCGATGCTGCACTTCATATCCTTGTGTTACCTCTGTTTGCCCACATTGTCGCAGCCCACTTCAA
CATTTTACTCTTTCAAGTTTTATTGTCATGTGTATCCACACCATGGCTGGAGTCATCAATATCATCAATCGTCACATCTT
CCTCCTCCGGCACAAGCTCATCACAACCTCGTTCTAGGATCCAGTTAAAGAGAATGCAACATGCAAGAGCAAGCCTAACT
AGGATGGGAAAAGAGTGGAATGACTTTTGATCCATGATCTTAAATCTATTCTTCAGAGCTCTAAATGGCCTCTCAGCCGT
AACTCTAAGGCTATAGTGTTTGAGATTGAACAATTTTGCAGCAGTCATAGGATGGTTACTTGAAGAGAATGGCACATGCT
TTTCTTGAAGGGTTGAAGGACACCAAGCCGACATGCATATCTTGCATCTCCTAGTTAGAACTTACCATTGGGTATATTGA
TCCCATCAGGTCTAGACATGCTATCAGTAGGAATGTTAGCACCATGGGTTGATCCTTCCCAGCCAGTTAACACATATACA
TGTGAAGTTCAGATCAAAGTCAACAGCAGCATGCACACTCTGGCTTGTGTAATATTTTTTACCCCCTCTATGTTGTAACA
TGTGACCTCGACACTCTATTAGTCACATCAGTATCATCTATTGTGCCAATACAATCCTGTGTTGGCATGAAAACACATTT
TTATGGCTCTATCACAACAATACAAGTATGTCATGGCATGAACTATGAGTAGTGCTCACCTTGAAATATGAATACCATCC
TGTGTTCATGCGAATCTTGGTAGGACTATTAACAGTTGGTGGCTTGATTATCTCTCCTCTGAGCTCCCCAATAGCATGCA
AGACTTTCTTGAAATACCTGGAAATGGTCTCATTGGAAATCCTGAATGTGCTGTGAATAACCCTGAACCTCTAATTATGA
CCTACAACATCAAGGAACATGACAACTTGATCTTCCATAGAGGTATGGATTCTTTCTTCTAGTAGCCCTGGTCCAAAATG
TATCCACAAGCTTGGCAAGAGGTGCTTGTCGCATTCGAAGCATGTTCAAAGTTGTTGTTGTTAACGCACAAGGGCCACAA
TCTAGATAATGAAATCACTTACATGTGACATAACAATGCCAAAGCATTATAAGCCTTAGGGCATATCGAACCCTCAAAAC
GCCTTCAACCGTCTGTACCACACGGTTCGGACATGTTTTGCCTTCCAACGTGGTCCTCCATCGGTCTGTTCGATGGTCCG
GACACACTTTCTCCTGCAAACTGGAGACAAACTAGGGGGCTTTGCGGGCGTCCGGAACGCTGCCACGCCCGCATCTGACT
AACCTGGCCCACCAAAAAACCCTCTCCTGCACCCGCACACTTTCCTGCCCTACTTTGGTCTGCATCGCTTCGAAGCATCA
CTGCCGCATTCATGCCGGCCCAGAGCGGATGCGACCTGTCACTAGAGTCGGCATTGAAGTGGCGTCTCGATCGAGAGCGA
TGCCACGCCGCTTCCCGATGCATGTCTCGCCTCTCCGAATTCAAACGACAGTAGTCCATCCGCCTCCCTCCATTAAACAC
ACACGGTTGTTGAGTAACTTGTTCCGGTGCCACCCGTCCATCCGTGTGCTGCCCACCATTAAGGACCTCGCTGCTTGGCC
TGCCCTCTGGCCTACTATTTAACCGGCCCCACAGGCGGGCAGTAGATCCGCATCCATCCACACTCTTCTGCTCTCTATCT
CCTCTCCACACCACACTTGCCATGGCCTACTAGAGCTCCAAAGGCCTTGTGGGATGACCTGTCGTCCGAACAGAAGGGGG
AGATCGCCGCCATTGTGGTCGGCTGCAGAGCGCCAGCCAGACGAGCTCACTGGAGGCTAGTGCTGCCGATGCGCCAATGG
CCGAGGCGGCCGATGATGAGCCGATGCCACCGTCCGTGCCGGCCAATGCCAACATCACCATGGGCGAGGCCCGTGCTCAC
TACATGGACATGGTGCTGGAAGAGCGGGAGGCCGCGTTCCGGTAGGCGCAAGCCGACCAAGCCTACAATCTCCGCCTCCT
CGACGAGTACCGGCATGCAAAAGGGTGACTCACTGCCGGCACGACCATTGCAATGGACATGGACGTGCCCGAGCAGGAGG
TGCTACTCAAGTCCTACAGCTCCGCCCGCGACATCCGCTGCGAGCACTAGCGCTACCACCAGTATCAGGCGGATTTAGAG
GCCGCCTACAAGGAGATGGACGAGGCGGTGGATGAGGTGTTCAGCAAGAGCGAGGACGAAGACGAGGTCGCCAGCTCGGC
CGCGCCCCGCCACCATGACCACGAAGCCGGCTCGTCCACGAGCGCCACCGACAATGAGGAAGAGTAGGCCATGGGAGGTC
GCCGACCCTTGTATCCCATGGAAGCCACTGCTTCTCCCCTCTTGTTGAAGCCAAGCTTGGTGGCCTCCTCATCGTCGGCC
GATTAGCCGCTTGCGGCGCAAGGAGGCGGATAGCTTCACTTCCCAGCGCTGATGTGCGCGGAGGAGGCGGGGCTTCATTC
TTCGGGGCTCATGGCAGGCCGGAGATGAAGAATGGGCACCGGTGGCCATTTTAGGTTAGTTCTAGAGTTCGGTCTAGTTG
AAATATGTCTAAATGTAATGAATTTGTTTCAGTTTAGATAAAAAACATCCAGTTTTATCTAAAAGTTATCCAAGTATGAA
TGAATATTGTCCGATGCATTCAAATATACATCAAATTTTTTCATTTTCACTTAAATTCTTCCAAATGTAACGGGACGCAT
GCCGACAGCTTTGGATTGTCGTTGCATCAGTCTCATGTCCTCAGACAAACGCGGTGTCCGGTTTAGTGGTCGGCGTTGGA
GGTGCACTTAGACACAACCAAAAACTAACTGTAGTTGCGCCACGTTCTCATGTCTGTAGTCATCCTATAATTAAAACTGT
CCTATATGTACCACCCAAATAATCCCTATATATAGATTTGCAAGTTAACCAGTCGTTACTATAAAACGGTACCTATATAT
ATACATGCCATCAAATAGTATCTTCTCTTCATTCCGTCAACCAAGAGAAAGGATGGCTTGCAGTCGAGGCATATTCCTAT
CTGCCACCTTCGCCGTCCTGTCAATCCTATCACTCCCAAGGGCGACGCACGGCTGGGCGAACGGTGGCGCAACGTGGTAC
GGCGGCCCTAACGGCGACGGCAGCGAAGGTACATTCATGGATATGACTTTGCACGCACGATAACCGGCAACAACGCGAGG
AAAACTCACTCTACTACGCCAATGCGATACGCAGGTGGCGCGTGTGGTTATAAAAGCGATGTCGGCCAGGACCCGTTCTC
GTCGTTGATCGCCGCCGGCGGAGTGGGCATCTTCAAGAACGGCAAAGGCTGCGGTTCATGCTATCAGGTGGACGACACAG
TCGTTCGTTTGTTCCATGTGCCACGTTTGACGTTCAGATTATTTTGCTGTGCTAATTAATCAAATGCCCTACAGGTCAGG
TGCAAAGAGAACCCGGAATGCTCCGGCAAACACGTGACCGTCGTCATCACCGACCAGTGCCCCGACGCGCAGTGCCAGAA
GAGGCCGCACTTCGACATGAGCGGCACCGCCTTCGGCGCCATGGCCAAGCCCGGGATGGCCGATAAACTGCGTAACGCCG
GAGTCCTCAATATCGAATTCGAGAGGTGAAAAACGCATTCGAGTTTTGTTTTACAGATCGATCTCGTCCGATTAACGTTG
TGCACATGCACGGATGTGCTGTGAATGATAGGGCGACCAACTGATGTTGGTGTCTTACTTTTCTTTCATCAGGGTGCCGT
GCAAGTACCATGGCAAGAAGATTAGCTTCAAGATGGACTCGGGCGCCAACCCATTCTACCTCGCCATGCTGGTCGAATAC
GAGGCCGGCGACGGAGACCTCAACTCCGTGGAAGTCATGGAGGCCGGCGGCAAAAAAGGCTACGCCAAGTGGGAAAAGAT
GCGGCAGTCGTGGGGCGCCCTGTGGTGCATGGACTCCAAGACCGGGAAGCCTCTGGAAGCCCCATTCTCCTTCCGGCTCA
CCTCGAGTTCCGGCAAGGTGCTCGTCGCCAACAATGTCGTCCCCGCCGGGTGGAATGCTGGGAAGTGCTACGAGTCCAAG
GTGAACTACCCC
>chr2B_587
TTGC--T-------------------------------------------------------------------------
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---------------------------------------------------CAAGATGGGCCGTTTGAGTATTTGACCCC
ACGTGCAC----ATATGGACGCAATCACGCAACTAACCCGGCCGGATGAGTCATCTTTACCCAAAATCTCCGGAGTTGAC
AGAGCCTTCAGCGCCATGGCCCCGTCATCAAAGGATGGCCCGCTCCGTCTGAGTTGACCACAGTGCAAGCATGTATGCGC
GCCCTCTCCCTAAACCTCAGTAGTCGCCAGCACGTTCGCCTCCATAATTCGTGTGTGCACGACTAAACGTATTCGCTCCC
ACGTTTATAACACGTAAACCATCCTATATATACCACCCCGAATCGCACTAGTCCTGCAAGCAACACCGAGTTCTTGGTA-
--CTACCCAACAAACCTAGCTAGCCCATTGGCTTTCTGTCTCCTGACTGATAGCTAGATTATCAATGGCTAGTCCAGGCA
CATTGCTGTTGGCGACGGTGCTCGTCATCCTATCAATTTTCGTAAGCCCCATCTCCGGCTACTGGAAGCCGAGCCGCACC
CGCACCAGGCGCCCTAGCAGCCGCCGGTCCTGGTCCTCTGGCGGCGCGACGTGGTACGGCAGCCCCTACGGCGCTGGCAG
CGACGGTAAGTCTCTCGTCTCGTACATGTA--------------------------------------------------
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---------------------------------------------------------------CAGAGTATAAACACTTG
TCAGACTGAGACTTGCTCTTTTTCCGTGGACGAAATGCAGGTGGCGCGTGCGGTTACCAAAGCGCCGTCGGCCAGCACCC
ATTCTCGTCGATGATCGCCGCCGGCGGACCTTCCTTCTTCAAGAGCGGCAAAGGCTGCGGTGCATGTTATCAGGT----A
CGTAGATTGGTCGGTATATACGA------TGACATTTAG-ATTTAGCACTTTCATGTGAGTCAGCGTGCAAAGTGGATGT
ACGTTACAGGTCAAGTGCACCGGTAACAAGGCCTGCTCCGGCCGCCCGGTGACTGTCGTCATCACTGACAACTGCCCCGA
CGGTATATGCGCCTCGGAGGATCATTTCGACATGAGCGGCACCGCCTTCGGCGCCATGGCCAACCGAGGGATGGCTGACC
GCCTCCGCTCCGCCGGACAGCTCAAGATCCACTACGCGAGGTGAAAATGC------ATTT---TGATCTGATAATCCTAG
AGTG------------------------------TGTTTACTGAAGGCGTGCGTGCGTGACACTGGTCAGTTAA---TTT
CCTCAGGGTGCCCTGCAACTACAACGGCATGAACATTGTCTTCAAGGTGGACGCGGGCTCCAACCCGTTCTACCTCTCCG
TGCTGATCATCTACCAGGCCGGCGACGGAGACCTCTCTGCCGTCGACATCATGCAGGGCGGCTGCGCGCCCGGCCACCAC
AACGATCACGGCGCGCCGTGGATGGCGATGAAGCAGTCCTGGGGCGCACTGTGGCTCCTCCAGTCGAACAACGGGAAGCC
TCTCCAAGCCCCGTTCTCGTTCCGGCTCACCTCGGGTTCCGGCAAGGTGCTCGAGGTCACCAACGCCATCCCTTCCGGCT
GGACGGCCGGCACGTCCTACAGCTCCTCGGTGAACTACGCCAGCTAGGGCGGCTGGCGCGGGCTGTATGCTTTAGATCTG
GTTCTGCAATTTGTGAGCTTTTACCTTGTCAAAGGCCGGTATCCGGTAATCGGCATGCATGCGCGTCCGGGAATTGTGAG
CGGCCGCGTCAGAAGAGGAAGAAAGTCAAGTGTTTTTGTGTTGTGTTCTTTGCTCTTCCCTCTCCGAGGCCACTGCCTTG
CAGTTGTTTCCCTAGTGATGTCTTCTTCTTGAGTTGTAGTGATGCAGCAATAGATGCGATGTTTCTTGGGTCCATTTATC
GCTCAGGCTTTGGTTTGGGGGTGCCGAAACTTGGTATACGAAAATGGCCACGAAATCAGAAAAATAAGATCTTGTTAACT
AAAAGCGGAAAATATGCAAAAGCTGGTTGGACAAACGGGATCATGAACGTTCGCCGTAATGCCAAATACATC-AAAATAG
ACATTTTCGTAGATTTTACTTGGATTCTGAACTAGAGGAAAGTAA---ATAGACAAAAGGAGGAAAGATAATACAAATAA
TGACAAAA-AAATTGCACTTGTGCAGAAGTA-ATATT-AAGGCATTTGCAAATCACAGAGCATGACTAGGCACATAACCT
CACTTTACTAAATATTTGCATTCTCAACCTAAG---CATCTTGGTAATGTGCAAACTAGAAAATATTTTATTACATGCAA
ATAAAGTTTAAACCTATTTGTAAGTTGTCCAAGAATTGTTTCAAATCCTCAACCACTTGAGGCTTCAAATCATATCCAGC
CACTCTTATGTCCATTTCAGATGCGTTTGGTAGGTTGCGTCCTTTTTGGGCTATTTGCATCTGTG--------------G
GTTGAGTGAATAAAGACAAAAAGA--AAGTTCATGTTTCACACATACTTTGGCTATCTGTATG-------CACTGAGCAG
TTTTATGACAAGTGTTTGGTTGGCATGAGTTCTAGATTATGGTTGTCAATGTGCAAAATATGATGTTTGGTTCTGCATGA
TCTATGTTGTGGTCACCCTT------------------------------------------------------------
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>chr2D_1608
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------------------------------------GCAGGTGGCGCGTGTGGTTATAAAAGCGATGTCGGCCAGGACCC
GTTCTCGTCGTTGATCGCCGCCGGCGGAGTGGGCATCTTCAAGAACGGCAAAGGCTGCGGTTCATGCTATCAGGTGGACG
ACACAGTCGTTTGTTCCATGTGCCACGTTTGACGTTTAG-ATTATTTTGGTGTGCTAATTAATCAAATGCCC--------
----TACAGGTCAGGTGCAAAGAGAACCCGGAATGCTCCGGCAAGCACGTGACCGTCGTCATCACCGACCAGTGCCCCGA
CGCGCAGTGTCAGAAGAGGCCGCACTTCGACATGAGCGGCACCGCCTTCGGCGCCATGGCCAAGCCCGGGATGGCCGATA
AACTGCGTAACGCCGGAGTCCTCAATATCGAATTCGAGAGGTCAAAAACGCATTCGAGTTTTGTTTTACAGATCGATCTC
GTCCGATTAACGTTCTGCACATGCACGTATGTGCTGTGATAGGGCGAGTAACAGATGTTGGTTTCTTATTACTTTTCTTT
CATCAGGGTGCCGTGCAAGTACCATGGCAAGAAGATTAGCTTCAAGATGGACTCGGGCGCCAACCCATTCTACCTCGCCA
TGCTGGTCGAATACGAGGCCGGCGACGGAGACCTTAACTCCGTGGAAGTCATGGAGGCCGGCGGCAAAAAAGGCTACGCC
AAGTGGGAAAA---------------GATGCGGCAGTCGTGGGGCGCCCTGTGGTGCATGGAGTCCAAGACCGGGAAGCC
TCTGGAAGCCCCATTCTCCTTCCGGCTCACCTCGAGTTCCGGCAAGGTGCTCG---------------------------
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------------------------TCGCCAATAATGTCGTCCCCGCCGGGTGGAATGCTGGGAAGTGCTACGAGTCCAAG
GTGAACTAC---
>chr2B_1608
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------------------------------------GCAGGTGGCGCGTGTGGTTATAAAAGCGATGTCGGCCAGGACCC
GTTCTCGTCGTTGATCGCCGCCGGCGGAGCGGGCATCTTCAAGAACGGCAAAGGCTGCGGTTCATGCTATCAGGTGGACG
ACACAGTCGTTTGTTCCATGTGCCACGTTTGACGTTCAG-ATTATTTTGGTGTGCTAATTAATCAAATGGCC--------
----TACAGATCAGGTGCAAAGAGAACCCGGAATGCTCCGGCAAACACGTAACCGTCGTCATTACCGACCAGTGCCCCGA
CGCGCAGTGTCAGAAGAGGCCGCACTTCGACATGAGCGGCACCGCCTTCGGCGCCTTGGCCAAGCCCGGGATGGCGGAGA
AACTACGTAACGCCGGAGTCCTCAATATCGAATTCGAGAGGTGAAAAAGGCATTCAAGTTTTGTCTTACAGATCGATCTC
GTCCGATTAACGTTCTGCACACGTACGGATGTGCTGTGATAGGCCGAGCATCAGATGTTGGTTTC---TTACTTTTCTTT
CATCAGGGTGCCATGCAAGTACCATGGCAAGAAGATTAGCTTCAAGATGGACTCGGGCGCCAACCCGTTCTACCTCGCCA
TGCTGGTCGAATACGAGGCCGGCGACGGAGACCTCAACTCCGTGGAAGTCATGGAGGCCGGCGGCAAAAAAGGCTACGCC
AAGTGGGAAAA---------------GATGCGGCAGTCGTGGGGCGCCCTGTGGTGCATGGAGTCCAAGACCGGGAAGCC
TCTGGAAGCCCCATTCTCCTTCCGGCTCACCTCGAGTTCCGGCAAGGTGCTCG---------------------------
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------------------------TCGCCAACAATGTCGTCCCCGCCGGGTGGAATGCTGGGAAGTGCTACGAGTCCAAG
GTGAACTACCCC
>SNPs
---------------------------S-S----S-SSS----S-----S---S--S-S-----------S----S----
---SS-SS--------------S----SSSS----------------------------------S-S---------S--
----------S-------S-------------------------------------S--S-------------S------
-------S----S-------SS-----------S--S---S---------------S-----S-------S---------
-SSSS----S-----------------------------------SS----------------------------S----
-----SS--S-------S----------------S---------------S---S--------------S--S-------
------S---------S--------S---------------S------------------SS--------------S--S
S--S-----S------------------S-----------SSSSSSSSSSS-----S-----S-----------------
--------------------------------------------------------------------------------
--------------------S--------------------------------------S-S-------S----S-----
--------------------------------------------------------------------------------
------------------S--------------------------------S----------------------------
------------------------------S--------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------S--------------------S--S--S--------------
--------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-------
-----S----------------------------S---------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
---S----------------------------------------------------------------------------
----------------S--------------S----------------S---------S----S------------S---
SSS-SS-S-SSSSSSSS-------SS--SSS-S---S------------------------------S-SS---------
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-------------------------------------------------S------------S-----------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------S--------S----------------------------------------------
-------------S------------------------S----S------------------------------------
------SS-----------------------------------------------S------------------------
---------------------------------------------SSS--------------------------------
--------S---S-S----------------S------------------------------------------------
-S---------------S----S---------------------------------------------------------
--------------------------------------------------------S-----------------------
-----------------S-------------------S------------------S-----S--S-----S---S-S--
------------------S-S---------------------------------------S-----------S---S---
-----------------S-------------S-----------------SS-----------------S-----------
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>forward_561
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-------------------------------------------------------------ACACGCATGGAAAGTGTTG
G-------------------------------------------------------------------------------
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>reverse_1570
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-------------------------------------------------ACCCTCTCAGACTGCAGAGT-----------
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>forward_1385
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-----CCAATCCAGAACTCGCCTGT-------------------------------------------------------
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>reverse_2814
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-------------CTTGGGGGTGCTGAAACTTG-----------------------------------------------
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------------
