>input_sequence_50237
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---------ATGGCCAATTTCAAGATCACTAGTTACGCCGGCGTACTGGTGGAAAACAGCAAGCTTGACTTCCAAAGCTT
GTATTTGCGCAGGATCATTTCTGGGGATAAGAAAAACCAGTATGTAGTGATAGATGGATTTGGTACTACTGACCTTGGTC
TCACAACCATCAACGACTGGGCAATATATGATGGTGTGGCCCCTGGCGCAAAGCTAGTCGCTCGTGCAAAAGGCATGCGT
ATGAATG------CTGCTGGCTGGTGCAATTTATTCATCATAGTGTTCGAGCTTGACAGGTAACTTGTATGTGTTTTGTC
CTGTAATGTGCTAACATGTTACATTTTT----TTAGCATCACATTGTCTTGGTACATGTATATG--ATATTTGTGAACCA
CATAGGTTCAAAGGATCCACGCTTGAGGTAATGGGAGCAACTACTGATGAACAAGGGGAATGGGCTATTGTTGGTGGGAC
TGGTGACTTCACTATGGCGCGTGGTGTCATCCAGAGAAAAATACATCAAAAAGAAGCTGAT------GGAGATGTA----
--TTAGAGCTTACTATCGATGCATTCTGCCGCATGAAGGTGAGTGCTTCTACTACTTCCGACACCGCCAACCAGGCGCAG
TCCAAGAGGGCGCCAGCTCCTCACATGTTCCGGGAGATTGTTGCCGGGGAGAAGGTCACCAATGTAGCTGCACTGGAAGA
TCAGGTTTCCACCGGGATCTTCTTGACTGGGAAAACAAAGGTTTACTTCTTATGAACATGAACCAAA--------CTATA
TGATATGGAAAGATTTACCTTCTG-AACATGGCTTATGCTTCAAAC-----TTTCTGCAATGGTGCAGAAGTACTGGGTG
GATGAGAGGACTAGGCACAACTGCTTCATGCTGTTCCCCAGAGGCCTGGCCATCACTTGGAGCGAAGAACCCCAATACTG
GACTTGGCAACCCCTGAAAGAAGGAAGG-TAGTTAAGAATCATAAACATG------------------------------
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-------------------------------------------TGTATATG-----------------------------
------------------TATACATTATCACAGTTGTTCATGAATCATAAACATATGTATATGTATACACTATCAGCTAT
TTTCATTTGTTCATGCATCTTGCCTCAAGAATTATATCTACTTACCATGTTCTGAAACTGACATGTTACCATCAGTGCTG
CCGAAGCTGGAATCGAGATGGTGGCGCTGAAGAACGTCTGCTGGTTGGAGGTCCAAGGGAAGCTGGAACTGCCCCATCTC
ACACCAGGAGTCACCTATGAGGTTTTCTTCGAGGTGATGCTCGACGATACGGCCTACGGGTGGTCGACGCCGGTGAACTT
CCGGCTCAAGTTCCCCGACGGGACGATCCAGCAGCACAAGGAGAACCTGCAGGAGAAGCCCAGGGGGGAGTGGCTGCAGG
TCAAGGTTGGGGAGGTTAAGCCACACAATGGGCAGAATGGAGAGGCAGAGATCTCCATGATTGAGTCTGATGGTGGGCAG
TGGAAGAGGGGGCTCCTCATCAAGGGCATCAAGATCATCCCAAAAGAATGA-----------------------------
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>chr3D_1_TraesCS3D01G135800
CCACGTCGTCGTGTTCATCCCCGGGGATTAAGTCAGACAAGTATGCAATACATGCATGTGACATGTCAAGCTGGAATCAT
ATCATAATAAAAGAGAAGACCTGATGACATCTCACCGAGGACTTGCTTATTTATAACTAGTCTTCAAGGTCCTTCTAATT
TACTGCAAACGAATTATTAGCATCTTGATGATGCGATCTGATCCTTACATGTGAGGTGGTGACCGAGATAAACTTTTCAG
TAACATGTTGCGCCCCACCGTAGCTGGTAAAATAATTTGGAGAGTG---TCATGAGCGGAAAGGAATGATAGTGCAATCT
GCGGGGACGATCGTCGGTGAATTTGATCAAACATGCACAT--------GGCACACATAAATACGAAACTGAAATAATAAT
TCATGGTTATGCGATTGATAGGCTTGCGAAGACTCACCCGCTCACCGGAGATCCTGTGGGCG------------ACTTAT
CTCACCACCCTAAGAAGGAATAATCGTCTCTGTTTCCCTTGGGCGTCCTGCTCAACTCGCATGGAGTTCAGGAATGAAGG
GCCAGGGGGTAGCCGTGGTACATCCAGAAGGTGCTAAACCAAAGATAACCTTAATAAGACCATTT---------------
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--GTCCTCAGTAAGGCGTAGACATGACGGTGAATACTTTTAAAAGAATCATTCAAGGAGTAGCAGCACTCATGTG-----
----------CTCTTATTGCATCCATGCCAT----GTGCAATAGCTGTACTCATGTGCTCTTTGGCATGATGTAT-----
-------TAGTTATCTCGAGCATGAGCC-----TACT--CATGTGCTGTTGCCATTGCCGATCTGTAGACCAGTATGAAG
TCAGAATCATCGTCATTATATATT--CTAAACAGAGAAGTCAATGGAGAGATAGCCAATCAACAAGCTGGGACTAATCGT
AAAGACT--TGAAGCAAGACTTGGT------ACTTGGTAGCTTTCTATGGATGCTATAAA--------------TACCCC
TCGCCAAATCAAACAAGGCAAAAGAAAAGCTGTCCTCTCTCACCCCCCCACCA------------------CCACC----
-----ACCAATGGCCAATTTCAAGATCACTAGTTACGCCGGCGTACTGGTGGAAAACAGCAAGCTTGACTTCCAAAGCTT
GTATTTGCGCAGGATCATTTCTGGGGATAAGAAAAACCAGTATGTAGTGATAGATGGATTTGGTACTACTGACCTTGGTC
TCACAACCATCAACGACTGGGCAATATATGATGGTGTGGCCCCTGGCGCAAAGCTAGTCGCTCGTGCAAAAGGCATGCGT
ATGAATG------CTGCTGGCTGGTGCAATTTATTCATCATAGTGTTCGAGCTTGACAGGTAACTTGTATGTGTTTTGTC
CTGTAATGTGCTAACATGTTACATTTTT----TTAGCATCACATTGTCTTGGTACATGTATATG--ATATTTGTGAACCA
CATAGGTTCAAAGGATCCACGCTTGAGGTAATGGGAGCAACTACTGATGAACAAGGGGAATGGGCTATTGTTGGTGGGAC
TGGTGACTTCACTATGGCGCGTGGTGTCATCCAGAGAAAAATACATCAAAAAGAAGCTGAT------GGAGATGTA----
--TTAGAGCTTACTATCGATGCATTCTGCCGCATGAAGGTGAGTGCTTCTACTACTTCCGACACCGCCAACCAGGCGCAG
TCCAAGAGGGCGCCAGCTCCTCACATGTTCCGGGAGATTGTTGCCGGGGAGAAGGTCACCAATGTAGCTGCACTGGAAGA
TCAGGTTTCCACCGGGATCTTCTTGACTGGGAAAACAAAGGTTTACTTCTTATGAACATGAACCAAA--------CTATA
TGATATGGAAAGATTTACCTTCTG-AACATGGCTTATGCTTCAAAC-----TTTCTGCAATGGTGCAGAAGTACTGGGTG
GATGAGAGGACTAGGCACAACTGCTTCATGCTGTTCCCCAGAGGCCTGGCCATCACTTGGAGCGAAGAACCCCAATACTG
GACTTGGCAACCCCTGAAAGAAGGAAGG-TAGTTAAGAATCATAAACATG------------------------------
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-------------------------------------------TGTATATG-----------------------------
------------------TATACATTATCACAGTTGTTCATGAATCATAAACATATGTATATGTATACACTATCAGCTAT
TTTCATTTGTTCATGCATCTTGCCTCAAGAATTATATCTACTTACCATGTTCTGAAACTGACATGTTACCATCAGTGCTG
CCGAAGCTGGAATCGAGATGGTGGCGCTGAAGAACGTCTGCTGGTTGGAGGTCCAAGGGAAGCTGGAACTGCCCCATCTC
ACACCAGGAGTCACCTATGAGGTTTTCTTCGAGGTGATGCTCGACGATACGGCCTACGGGTGGTCGACGCCGGTGAACTT
CCGGCTCAAGTTCCCCGACGGGACGATCCAGCAGCACAAGGAGAACCTGCAGGAGAAGCCCAGGGGGGAGTGGCTGCAGG
TCAAGGTTGGGGAGGTTAAGCCACACAATGGGCAGAATGGAGAGGCAGAGATCTCCATGATTGAGTCTGATGGTGGGCAG
TGGAAGAGGGGGCTCCTCATCAAGGGCATCAAGATCATCCCAAAAGAATGAATGGCTTGGTTGTGTTCTGTTACCAACCA
TCGTTGGCTGCTGTTTGTCAACTGCCCTAGCCCCCCCTAAGATCAGTTTGATGCATGGGAATAATATTTTCAGTGATATA
AAAATTCAAGAGTTCTGAATGAATTTTATGTGGTCATTTATTAATTTATTTTGCAAATTATGTCTTCAAGAAGTTGCACT
AGAAAGAATATGAGATCACTTTCCTTGGTTGCTATAA-------------------------------------------
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------------------------------------------------------------ACCTCTAAGTACTGGTTATC
TGACTACAAAAAGACT---ATTTATTCAGTGCTGCACTAACTTCTGTTTTTTTTCTGTAACATATACCAAGCTTACCAAA
AATTACTCTTAACATTTATCTAAATACGAGTCGCTACAGAGGACA-ACTTAGAGAAGGCACAAAGCTTATAAATCACCAC
TCAGCTAGGTTAACACGTTACAAGCTTAACATGTTTACTGATT-----------------GGATCATGTCAGCAACAGAG
TCAAGGAGAATTCAAGCCT--AACTTGATCAAGG-------AGTCGTTTAACAGATAACAATGACATGGTCACATTTTAT
TGTGTCAAATAAGCAAGTATGATTCAAATTACATTGCCACCCCAGAGCTCATGAAAACAAAAAACAAAGCTCTAATTGTC
CCACTTTAATGGGATTCTGTTCCCATTTCTCAATCGGCATCAAATGAACAGAGGAAATCTGCTCAACTGAAAATCTGGTA
GCCGGACTTGAAATTGTACAACATGGCTTCATGGGCTGATCTTCCATTTTAAGTGGAAGGAAATTCTAAAACGACTGGAT
GCTAGGTACAGGCCGAGGCATGGGCTTATCTTGCAAGAAATGCTCAAAAAGCTTCAAGGCTTGCCGTGGACGATGGAGGG
GAACCTCATGTCCTGCGCCTCGGATTGTCACCAACGTCAAGCCTTTGTACACTTGGCACCAACCAGCAACCTAAGCAAGA
TACACACCATTAGAGTTTGATGAGCATATATGTAGCAAAATGAAAA-GGGAATAAAACTGCCAGT
>chr3D_37
------------------------------------ACGAGAATACAATACTTGCATGTGGCATGTCAAGCTGGGGTC--
ATTATAAGAAAAGAGAAGACCTGGTGAGATATCATCGAGGACTTGATTATTTATAACTAGTCTTCAAGGTCCTTCTAATT
TAATGCAAACGAATTAGCATCT------TGATGCGATCCGATCCTTCACATGTAAAT--TGAGAGAGGTAAGATTTTCTG
TAACATGTTGCGCTCCACCGTAACTGGTAAAATAATTTGGAGACAGTGTTCATGAGCCAAAAGGAATGATAATGCAATAT
GCGGGCAGGGCCATTGGTGAATTTGATCAAGCATGCACATTTGCACAAGGCACACACGAGTATGAACCTGAAACAATACT
CCATGGATAGGCGATTGATAGGCTTGCGAAGACTCACCGGAGATCACTTGGGTTAAAACATGACCATTTTCTCAACTTAT
CTCACGGCCCCATGAAGGAACAATCGTCTCGGTTTCCGTCGGTCATCATGCTTAACTCCCACGGAGTTCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCATACAAATTGCCGGCCATGCATAGAATCAAGCCATCGCACCATCCACCA
TGGTCCTCATCAAGGCGTAGACTTGACGGTGAATACTTTTAACGGAAGTGTTTATGGAGTAACAGCACTTTGTCAAGATG
TATTAGGCATCTTTT---GCATCCATGTGACGTGCAAT-AATAGCTGTACTCATGTGCTGTTTGGCATGATGTAT-----
-------TAGGTGTCTCGAGCATGATGGGCCTAGCTGTACATGTTCTGTT----------ATCTCTACATCATTATGAAG
ATAAGCC-------ATTATGTACTTAAAAAACAGATGAGTCGTTGGAGAGATAGCCAACCAACAAGCTGAGACTAAATGT
AAAGACT--TGTGAAACTAATTGGAAGCAAGACTTGGTAGCGTTCTGTCGATGCTATAAA--------------T-----
---------CACACAAGGCAAAAGAGAAGCTCTACACTTGATAGGTATCCTCAGTTGTCC-TCACCCCCTCCACCCGCTC
CTCCTCCCAATGGACAATTTCAAGATCACTAGTTACGCCAATGCGCTGGTGGAAAACACTAAGCTTGACTTCCAAAGCTT
GTATCTGCACAGGATCAGGTCTGGGGATAAGAAAAACCAGTATGTGGTGATAGATGGAGTTGGTGCTACTGACATTTGTC
TCACAACCATCAACGACTGGGCAATATATGATGGTGCGGCCGTGGACGCAAAGCTAGTTGCTCATGCAAAAGGCATGCAT
ATGAATGCTGCCGCTGCTGACTGCTGCAATTTATTCATCATAGTGTTCGAGCTTGACAGGTAACTTGTATGTGTTTTGTC
TTGTAATGTGCTAGCATGTTATC-TTTT----TTAGTATCACATTTTCTTGGTGTGTGCATCTG--ATATTTGTGAATCA
CATAGCTTCAAAGGATCCACGCTTGCAGTAATGGGAGCAACTACAGAGGAACAAGGTGAATGGGCTATTGTTGGTGGGAC
TGGTCAGTTCGCTATGGCGCGTGGTGTCATCCAGAGGAAAATGCATCAAAAATTAGCTGAT------GGACAAGGAGATG
TGTTAGAGCTTACTATCGAGGCATTCTGCCGCAGGAAGGTGAGCGTTCTA------------------------------
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>chr3B_596
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----------------------------------------------------------------------------ACCA
TGGTCCTCATTAAGGCGTAGACTTGACGGTGAATACTTTTAACGGAAGTGTTTATGGAGTAACAGCACTTTGTCATGATG
TATTAGGCATCTTTT---GCATCCATGTGACGTGCAAT-AATAGCTGTACTCATGTGCTGTTTGGTATGATGTAT-----
-------TAGGTGTGTCGAGCATGATGGGCCTAGCTGTACATGTTCTGTT----------ATCTCTACATCATTATGAAG
ATAAGCC-------ATTATGTACTTAAAAAACAGATGAGTCGTTGGAGAGATAGCCAACCAACAAGCTGAGACTAAATGT
AAAGACT--TGTGAAACTAATTTGAACCAAGACTTGGTAGCGTTCTGTCGATGCTATAAA--------------T-----
---------CACACAAGGCAAAAGAGAAGCTCTACACTTGATAGGTATCCTCAGTTGTCC-TCACCCCCTCCACCCCCTC
CTCCTCTCAATGGACAATTTCAAGATCACTAGTTACGCCAATGCGCTGGTGGAAAACACTAAGCTTGACTTCCAAAGCTT
GTATCTGCACAGGATCAGGTCTGGGGATAAGAAAAACCAGTATGTAGTGATAGATGGAGTTGGTGCTACTGACATTTGTC
TCACAACCATCAACGACTGGGCAATATATGATGGTGTGGCCGCGCATGCAAAGCTAGTTGCTCATGCAAAAGGCATGCAT
ATGAATGCTGCCGCTGCTGACTGCTGCAATTTATTCATCATAGTGTTCGAGCTTGACAGGTAACTTGTATGTGTTTTGTC
TTGTAATGTGCTAGCATGTTATC-TTTT----TTAGTATCACATTTTCTTGGTGTGTGCATCTG--ATATTTGTGAATCA
CATAGCTTCAAAGGATCCACGCTTGCGGTAATGGGAGCAACTACTGAGGAACAAGGTGAATGGGCTATTGTTGGTGGGAC
TGGTCAGTTCGCTATGGCGCGTGGTGTCATCCAGAGGAAAATGCATCAAAAATTAGCTGATGGACAAGGAGATGTA----
--TTAGAGCTTACTATCGAGGCATTCTGCCGCAGGAAGGTGA--------------------------------------
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>chr7D_603
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--GTCCCCAGCAAGGCGTAGACTTGATGGTGAATACTTTTAACATAAGTGTTCAAGGAGAAGCAGCACTCATGTG-----
----------CTCTT---GCATTCATGTCACGTACGTGCAATAGCTGTACTCATGTTCTCTTTGGCAGTTTGGCCTGATT
TATTAGCTACGTATATCCAGCATGAGCCAACAGTACT--CATGTGTTGTTGCA------GATCTCGAGATCATTATGATG
ATAGAAAAGTCGTCACTATGTATT--AAAAACAGATGAGTGGTTGGAGAGATAGCCAATCAGCAAGCTGGGACTAAACTT
GAAGACT--TGTGAGACTAATTTGAAGCAAGGCTTGGCAGCGTTCTATGGATGCTATAAA--------------TACCCC
TATC--------------CAAGAGAAAAGCTCTACACTTCATAGGTATCCTCAGTTGTTCTTCACCCCCACCCACC----
-----CCAAATGGCCAATTTCAAGGTCACTGGTTATGCCGGGGCAC---TGGAAAACACTAAGCTTGACTTCCAAAGCTT
GTATTTGCATAGGATTAATTCTGGGGATAAGAAAAACCAGTATGTAGTGATAGATGGATTTGGTACTACTGACCTTGGTC
TCACAACCATCAACGACTGGGCAATATATGATGGTGTGGCCCCGGACGCAAAGCTAGTCGCTCGTGCAAAAGGCATTCGT
GTGAATG------CTGCTGACTGGTGCAATTTATTCATCATAGTGTTCGAGCTTGACAGGTAACTTGTCTGTGTTTTGTC
CTGTAATGTGCTAACATGTTACTCTTCTTTAGCTAGCATCACATTGTCTTGGTACATGCATATG--ATATTTGTGAATCA
CACAGTTTTAAAGGATCCACGCTTTCTGTAATGGGAGCAACTGCTGAGGAACAAGGTGAATGGGCTATTGTTGGTGGGAC
TGGCGACTTCGCTATGGCTCGTGGTGTCATCCAGAGAAAAATACATCAAAAGGTAGCAGAT------GGAGATGTA----
--TTAGAGCTTACTATCGATGCAGTCTGCCACAGGAAGGTGAG-------------------------------------
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>chr7B_812
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---------TCGTTATTATGTATT--AAAAACAGATGAGTGGTCGGAGAGATAGCCAATCAGCAAGCTGGGACTAAACGT
GAAGACTTGTGTGAGACTAATTTGAAGCAAGGCTTGGCAGCGCTCTATGGATGCTATAAATAGGCCTCTTCAAGT-----
---------CACACAAGCCAAAAGAAAAGCTCTACACTCGATAGGTATCCCCAGCTGTTCTCTCACAC------------
-----CCCCATGGCCAATTTCAAGGTCACTAGTCATTCGGGCGCACTGGTGGAAAACACTAAGCTTGACTTCCAAAGCTT
GTATTTGCACAGGTTCATTTCTGGGGATAAGAAAAACCAGTATGTAGTGATAGATGGATTTGGTAGTACTGACCTTGGTC
TCACAACCATCAACAACTGGGCGATATATGATGGTGCGGCCTCGGATGCAAAGCTAGTCGCTCATGCAAAAGGCATGCGT
ATGAA------CGCTGCTGACTGGTGCAATTTATTCATCATAGTGTTCGAGCTTGACAGGTAACTTGTGTGTGTTTTGTC
CTGTAATGTGCTAACATGTTCTT-TCTC----CTACTATCACATTCTCTTTGTAGAAGCATATGATATATTTGTGAATCA
CATAGGTTCAAAGGATCCACGCTTTCTGTGATGGGGACAACCACTGAGGAACAAGGTGAATGGGCTATTGTTGGTGGGAC
AGGTGACTTCGCTATGGCGCGTGGTGTCATCCATAGAAAAATACATCAAAAAGTAGCTGAT------GGAGATGTA----
--TTAGAGCTTACTATCGATGCATTCTGCCACAGGAAGGTGAG-------------------------------------
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>chr3D_1572
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--------------------------------------------GCTTCTACTCCTTCCGACACCGCCAACCAGGCCCAG
TCCAAGAGGGCGCCGGCTCCTCACGTGTTCCGGGAGATCGTCGCCGGGGAGAATGTCGCCGACATAGCCGCGCTGGAAGA
TCAGGTCTCCAAGGGGATCTTCTTGGCCGGGAAAACAAAGGTATACTTCTTCTGAGCATTGAACTA--ATATGTGCTGTA
AAATATCATAAGATTTTGCTTCCTCAACATGGCTTATGCTTCAAACTTTTTTTTTTGCAATGTTACAGAAGTACTGGGTG
GACGAAAGGACCAGGCACAACTGCTTCATGCTGTTCCCCAGAGGCCTACACATCACCTGGAGCGAAGACCCCAAGTACTG
GACTTGGCACCCCCTGAAAGAAGGAAGGTTAGTTAAGAATCATAAACATG------------------------------
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-------------------------------------------TGTATATG-----------------------------
------------------TATACATACTTAACGTG---------------------------------------------
----------------------------------------------CTGTTCTGAACCTGAAATGTTCAAATCAGTGACG
CCGAAGCCGGAATCGAGACGGTGGCACTGCAGAACGTTTGTTGGCTGGAGGTCCAAGGGAAGCTGGAGCTGTCCCATCTC
ACGCCAGGAGTCACCTACGAGGTCTTCTTTGAGATAAAGATCGATGACCCGGCCTGCGGGTGGTCGACCCCGGTGAACTT
CCGGCTGAAGTTCCCCGACGGGACGATCCAGCAGCACAAGGAGAACCTGGAGGAGAAGCCCAGGGGGAAGTGGCTGCTGG
TCAAGGTTGGGGAGGTTAAGCCGCACAAGGGGCAGAATGGAGAGGCAGAGATCTCCATGTTTGAGTATGACGGTGGGCAG
TGGAAGAGGGGGCTCCTCATCAAGGGCATCAAGATCACCCCCAAAGAATGAATGATCTGGTTTTGTTTTGTTACCAACCA
TCGTTTGCCGCTGTTTGTCGACTATGA----------TAAGATCAGTTTGATGCATGGGAATAATATTT-CACTGTCACA
AAATATCAAGAGTTCTGAATGAATGTTATGT-------------------------------------------------
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>chr3A_1572
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--------------------------------------------GCTTCTACTACTTCTGACACCGCCAACCAGGCGCAG
TCCAAGAGGGCGCCGGCTCCTCACATGTTCCGGGAGATCGTCGCCGGGGAGAATGTCGCCGACGTAGCCGCGCTGGAAGA
TCAGGTCTGCAAGGGGATCTTCTTGGCCGGGAAAACAAAGGTATACTTCTTCTCAACATGGAACTGATATATACGCTGTA
AAATATCATAAGATTTTGCTTTCTGAACTTA----------------------TTTGCAATGGTGCAGAAGTACTGGGTG
GATGAAAAAACCAGGCACAACTGCTTCATGCTGTTCCCCAGAGGCCTACACATCACCTGGAGCGAAGACCCCAAGTACTG
GACTTGGCACCCCCTGCGAGAAGGAAGGTTAGTTAAGAATCATGAACATG------------------------------
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-------------------------------------------TATATGTGTACAGTACTGGCTATTTACAGTTGTTCAA
GCGTCTTGCCTCAGGAATTATACATACTTAACGTG---------------------------------------------
----------------------------------------------TTGTTCTGAACCTGAAATTTTACCATCAGCGACG
CCGAAGCCGGAATCGAGACGGTGGCGCTGCAGAACGTCTGCTGGCTGGAGGTCCAAGGGAAGCTGGAGCTGTCCCATCTC
ACACCAGGAGCCACCTATGAGGTTTTCTTCGAGGTGAGGCTCGACGACCCGGCTTACGGATGGTCGATGCCGGTGAACCT
CCGGCTCAAGTTCCCTGATGGCACGATCCAGCAGCACAAGGAGAACCTGGAGGAGAAGCCCAGGGGGAAGTGGCTGCTGG
TCAAGGTTGGGGAGGTTAAGCCACACAAGGGGCAGAATGGAGAGGCTGAGATCTCCATGTTTGAGTATGATGGTGGGCAG
TGGAAGAGGGGGCTCCTCATCAAGGGCATCAAGATCATCCCAAAAGAATGAATGATCTGATTGTGCTTTGTTACGAACAA
TCGCTGGCTGTTGTTTGTCGGCTACG----------CTAAGATCAGTTTGATGCATGGGAATAATAT-------------
------CAAGAGTTTT----------------------------------------------------------------
-GAATGAATCTGAGATCACTTTCCTTGGTTGATATAA-------------------------------------------
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-------------------------------------------------------------CCACTGAGTACTGGTTGTC
TGACTACAAAAAGACTGTCATTCATTCAGTGCTGCACTAACTTCTGTTC--TTTCTGTAACATATGGCAAGCTGACAAAA
AATTACTCA-AATATTTATCTAAATACTAGTCGCTACAGAGGACAG-CTTAGAGAAGGCACAAAGCTTAAAAAACACCAC
TCAGCTAGGTCAACACATTACAAGCTTAACACGTTCCTTGACATGTTTGTTGA-----TCGGATCATGTCAGTAACAGGG
TCAGGGAGAATTCAAGCCTGCAACATGATCAAGGGTGGTACAGTTGCTTAACAGATAACAGTGGCATGGTCACATTTTAT
TGTGTCAAATAAGCAAGTGTGATTCAAATTACATTTTGACCTCAGAGCTCATGAAACTG-AAAACAAAGCTCTAATTGTC
CCAATTTAATGGGATTCTGTTCCGGATTCTCAACGGATATCAAATGAACAGAGAAAATCTGTTCAACTGAAAATGTGGGA
ACCGAACTTGAAATTGTACAACATGGCTTCATTCACTGATCTTCCATTTTAAGTGGAAGAAAATTCTAAAATGACTGAAT
GCTAGGTACAGGCCGAGGCATGGGCTTATCTTGCAAGAAATGCTCAAAAAGCTTCAAGGCTTGCCGTGGACGATGGAGGG
GAACCTCATGTCCTGCGCCTCGGATTGTCACCAACGTCAAACCTTTGTGCACTTGGCACCAACCAGCAACCTAAGCAAGA
TCCACACCATTAGAGAATGGTGAGCATAGATGTAGCAAAGTGAACAGGGGAATAAAACTG-----
>chr3B_1572
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--------------------------------------------GCTTCTACTACTTCCGACACCGCCAACCAGGCCCAG
TCCAAGAGGGCGCCGGCTCCTCACATGCTCCGGGAGATCGTCGCCGGGGAGAATGTCGCCGACGTAGCCGCGCTGGAAGA
TCAGGTCTCCACCGGGATCTTCTTGGCCGGGAAAACAAAGGTATACTTCTTCTCAACATTGAACTGATATATGG--TGTA
CAATATCATAAGATTTTGCTTTCTGAACAC-------GCTTCAAAC-----TTTTTGCGATGGTGCAGAAGTACTGGGTA
GATGAGAGGACCAGGCACAACTGCTTCATGCTGTTCCCCAGAGGCCTGCACATCACCTGGAGCGAAGACCCCAAATACTG
GACTTGGCACCCCCTGAAAGAAGGAAGGTTAGTTAATAATCATAAAAAATGGGGATAAGTATGTTTTACATCCCTCAACT
CTTTCGAAAGTATACAAATGATCCTTCAACTCCGAAACCATCAAAACTTAGTCCCTCAACTTTCAAAACCGGATAAATTT
AGTCCCTCATACCGCTTTCACGTGATTTTTTCTGACATGAAGTGGTTTTGACTAAAACAAGATACATCATACAGGCTAGG
CTGCCACGTCAGCGTGCAAATGTGCAGGGCCCACTTGTCAGTGTCAAGAAGAAAGAATAATAGCTTATTATAAAAATAAA
TTGCATACACAAGTTTCGAACCTGAGACCATAAGCAAGATAATGCACTAGCTAACCACTACACCAACATGGTATTTGGTA
AACATGTTCACAATAATGTTGATATTAATTCATTTAAAAGCGATTTTTCTTTTTTTTGCAGTTTCAGTTCTCTACATATA
TGTTAGTAATTCTTTTCAGGACTCATATAGCTAACTCATCTGCGTACCCAGCAGGAGATTCGGTGTTAGATTATAACAAT
ATATAAAAATATAGCTGTTATCATGCCGGGTGCGTTTCCATAAATAATATATAAAGTAAATCTGTATATTCGCTGTCGTA
GATCATCGGTTCGATTCGAGTCACACCGCACCAGAAGAGTTCTTTTGCGTGCCATTCTATTTTTTTCTTAGTTCCAGTTT
CGGTCACTGACAGGTTGGTCCCATTCAGTTTCAATCAAAAACCACTCCACGTCAGCAAAAAAAAATCCAAAAGCGGTATG
AGGGACTAAATTTATCCGGTTTTGAAAGTTGGGGGACTAAAGTTTGTTGGTTTTTGAGTTGAGGGACCATTTCTATACTT
CCGAAAGAGTTGAGGGATGAAAAATATACTTATCCCTAAAAAATGTGTATA-----------------------------
------------------TATACATACTTAACCTG---------------------------------------------
----------------------------------------------ATGTTCTGAACCTGAAATGTTCAAATCAGCGAGG
CCGAAGCCGGAATCGAGACGGTGGCGCTGCAGAACGTCTGCTGGCTGGAGGTCCAAGGGAAGCTGGAGCTGTCCCTTCTC
ACACCAGGAGTCACCTACGAGGTCTTCTTCGAGGTGAAGCTCAATGACCCAGCCTACGGATGGTCGACGCCGGTGAACCT
CCGGCTCAAGTTCCCCGACGGTACGATCCAGCAGCACAAGGAGAACCTGGAGGAGAAGCCCAGGGGGAAGTGGCTGCAGG
TCAAGGTTGGGGAGGTTAAGCCGCACAAGGGGCAGAATGGAGAGGCAGAGATCTCCATGTTTGAGTATGATGGTGGGCAG
TGGAAGAGGGGGCTCCTCATCAAGGGCATCAAGATCATCCCAAAAGAATGAAGGATATGGTTTTGTTTTGTTACCAACCA
TCATTTGCTGTTGTTTGTTGACTATGA----------TAAGATCAGTTTGATGCATGGGAATAATATTTTCACTGTTACA
AAATATCAAAAGTTCTAAATGAATGTTATGTCTTGAAGAAA-----------------------------AAGTTGCACT
AGAAAGATTCTTATATCACTTTCCTTGGTTACTATAAACCTCTGAGTACTAGCTATCTGACTAAAATAATACTACTTCCA
ATGTTCACTTTCATAAGACGTTGTAAATATTTCAGACAGCGCCCAAAACAGTTCAACGTCGCTGTCTGAAACGTCTTATA
AAAAAGAACGGAGGGGAGTATCATGTATTCAATGCTACACTAATATTTGTTTTTCTGTAACATATGTCAAGCTTACCAAA
AATTACTCGAACATTTATTTATCTGAATACGAGTTGCTACAGAGGACAACTTAGAGAAGGCACAAAGCTTAGAAATCACC
ACAACTAGGTTAACAAGCATGGGAAAGGCAATGGATCATGTTTGTTGATTGGATCATGTCAGCAATAAGGTCAGGGAGAA
TTCAAGCCTGCAACAGTTTTATTATCATCACCTGGGAGGCAATGGTAGGGGGGCTTGAGATGGCTGGAGATGGTGGTGCG
CATGTAGACGTTGGGTCTCTGCATGTCGAAATCCGCCACCCTCAGCAGCTCATTCTTCTTGATGTCAACAGCAATCACCT
TCGACGTCCTGGCTGCTGGCATTGGTCAGGAGGTACAGGACGCCGTCTTCGTGGGAGCTGAGGATGGGCTTGCAAACAAA
GAGAGACTGGGGCAAGCGATAGTTGGAGATTTCACGAGAGCTGAGCTGGTACTCCTCCTTGAAACGCAGGTCATCCAATC
CCAGGCCCCCATCGAGCCCCTCCAAGGTCCATGTGACCACCGTCCAGCCACTAGGGGTTTGCGAGCGCCGGCCGGGCTCG
GCGTGGACCTGAAGGTCGACGAACCTGATGATGCCGGAGTCTTTCACTGAGACGATGTCCCGGAAATGGTACGCCATGTC
GGTGCCCAGAGGGAGATGGTTCCGCGGCTGTCTTGGCTTGGGAAGGGGGAGATAGCAAAGCGGGGTGCAGGGGGTGTCGT
CGGCGAGCACGTCGCAGAGGAGCATGCCCCTCCACAGGTCGACCCAACCCATGACACCATCAATGGCGATGACCATGTCG
CAGCTGTAGTCGTCCGGCGGCGGCGGCTGCGGAGAAGCAGCCGGCCTGCGGCTCCAGAAACTGGCCTCGGAGTCGTAGGT
GCACAGGTAGTATCCGGAATGGTCCGGGCAGAAGTAGTCGTAGGCGAGCGTCGCGATCCTGTAGGCATCAGCATCATCCT
CGTTGTTGCTGCGGCAGTAACGCATGATGCCAATATCACTGGCGCAGAAGCAGAGAGTTCCCATGGTTGGCAGCATGCCG
TCGCTGAGCTGCGGGAGCCGGGTGAGCCGCGGCTTCCCCGACGGCGAGGGTGCCGAGTAGTAGACGAAGTAGTCGTGGTT
GCCTATGCGGATGCGGGAGCAACGGTCGTCTCCGTGGCAGAGAGTGAAGAGGGCGAGCTCGCCGTCCGTGGCGATCATCC
ATGGCTCGCCGACGAACAAGCGGGGGGTGTCTTCTTCTTCTTCCTCTTTGCCGTGATCGGCGGGGCAGTGGGCGAGGCAG
CAGAAGTGGGAGACGCGGGGCGGCTGGGCGAGGCAAAGGGTGACCCGCAGATTGATCTGCTTGCCGTCCAGGTCCCGGGT
GAACTGGCAGTCGGCGGTGGTGTGGTTCTCCTTGTCGGCCATGTAGGCGGCCCTGTCCAGGAGGACCTCCCCCCAGTCCC
AGTCAGAGTCGCTCGCCGCCGCATCATCATCTGCCGCCGGCGGACGTAGTGAGGCCTCGTCATAGCCTTTGAGCGACATG
GTGGATCTGGATCTCGCACAGGCCTTGACGATCGTCCTCCAAGGAAGGACCATTGAGTATTTATTCAGAGGGACAAGGAA
AGTCAGGTTCTAGTCAGGACCGGATTCATGGACGGACACGAAACGGAGAGGAAGACTTCTCCTCCTGGTAGATATATGGC
ACGGCGGAAGGAGAAGAGAATAATGCACAGGGGATGATGGTATTACACTTCACGGTTGTACAGCTGCTGTGATCCTTCGG
TTACAGCCTTAAAACAGATCCATCACATGGAGCGAAGACCCCAAATGCTGGACTTGGCAAGTATTGAAAGAAGAACGGTA
GTTAAGACTTAACAGTAACAACATAACTATTTTCAGTTGTTCAACCATCTTCCTCAGGAATTATATGTACTAACCGTGCC
GTTCTGAACCTGATGATGGTACCATCAGCAACCCCGAAGCCGAAATCAAGACGGTAGTGCTGCAAAACTGGCTCGAGGTC
CAAGGGAAGCTGGAGTTGTCCCATCTCACACCAGGAGGAACCTATGAGCTTTTCTTCAAGGTGATGCCCAACGACCCGGC
ATAAACTCCGGCTCAAGTTCCCCGACGCCGACGGCACAATCCAGCAGCACAAGGAGAACCTGCATGAGAAGCCCAGGGGA
AGTGGCTGCAGCTCAAGGCTGGGGAGGTTAATCCACACGAGGCAGAATGGGAGAGGCTGAGATCTCCAGGTTTGAGTATG
ATGGTGGGCAGTGGAAGAGGGGGATCCTCATCACTGAGTATGTTTCCTTGCTTGATATAAACCACTGAGTATTGGTTGTC
TGACTACGAAAAGACTGTCATTTATTTAGTGCTGCACTAACTTCTGTTC--TTTCTGTAACATATGCCAAGCTGACCCAA
AATTACTCA-AATATTTATCTAAATACAAGTCGCTACAGAGGACTGACTTAGAGAAGGCACAAAGCTTATAAATCACCAC
TCAGCTAGGTTAACACATTACAAGCTTAACACGTTCCTTGACATGTTTGTCTGATTGGTCGGATCATGCCAGCAACAGGG
TCAAGGAGAATTCAAGCTTGCAACATGATCAAGGGTGGTACAGTTGCTTAACAGATAACAGTAGCATGGTCACATTTTAT
TGTGTCAAATAAGCAAGTATGATTCAAATTACATTGTGACCTCAGAGCTCATGAAACTG-AAAACAAAGCTCTAATTGTC
CCAATTTAATGGGATTCTGTTCCGATTTCTCAACCAATATCAAATGAACAGAGAAAATCTGTTCAACTGAAAATGTGGGA
ACCGAACTTGAAATTGTACAGCATGGCTTCATGCACTGATCTTCCATTTTAAGTGGAAGAAAACTCTAAAATGACTGAAT
GCTAGGTACAGGCCGAGGCATGGGCTTATCTTGCAAGAAATGCTCAAAAAGCTTCAAGGCTTGCCGTGGACGATGGAGGG
GAACCTCATGTCCTGCACCTCGGATTGTCACCAACGTCAAACCTTTGTACACTTGGCACCAACCAGCAACCTAAGCAAGA
TCCACACCATTAGAGAATGGTGAGCATAGATGTAGCAAAGTGAACAGGGGAATAAAACTG-----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--S--S------S--------S-------------SS--SS
--S----S---------------S---S--S---S----------S----------------------------------
--S-------------SS-S-SSSSSSS----------S-------SSSSSSS-SS-SS---SS---S---SS-----S-
-------------S--------S--------------------SS------------SS------------S------S-
-----S-S-SS-S-S---------------S-------------------------SS-S--S---S------S----S-
S-----S--S----------------------------S-SSSS-SSSS-SSSSSSSSSSS-------------------
-----SS---S-S-------S---------S------S-S--S-S--S----S-----S--S-------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-------------------S----SSS------------------------------
---------------SSS---------S--S-------------------------------------------------
----------S-----------------------------------------SSSSSSS-----S----S--S-------
SS----SSS----------S------SS-------SS----SS---------------------------------S---
-----------SSSS-SS-S----S----------------S--------------------------------------
-SS-SSSSS--S-------------------S-S-S---SSSSSSSSS-S------------------------------
-----S-------------------------------------S--------------SS--------------------
--------S-----------------------------------------------------------------------
-------------------------------------------S-S----------------------------------
-------------------S------------------------------------------------------------
----------------------SS----------------------------------S------------------S--
-------------------------S---------------------S--------S-----------------------
----------S------------------------------------------S--------------------------
---------------------------------S---------S------------------------------------
--------------S-----------------------S--S-----------S---S--S-S-----S--S--------
------S------------------S-S--------------S--------S--------S-S-S------------S--
SS----SSS-------SS----SS------------------------------S-------------------------
-----------S------------------------------------SS------S-----------S---S-------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------SS-S-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S----S---------------SS-
-------S----------S----------S--------------S----------------------S---S--------
-------------------------------------S---------SS-------------------------------
-------------------------------------------------S-----------------S------------
----------------------------S------------------------------S------S-------------
------------------------------------------------------SSS----------S------------
-------------------S---S-SSSSSSSSSSS------------------------------------S--S--S-
---SS-------------------S------SS-S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
---------S----------------------------------------------------------------------
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---------------------------------------------------------------S--S----------S--
------------------------------------------------SSS--------------S-------S------
--------SS--S--------------S----------------------------------------------------
----------------S--------------S---SSS---SS-----------------------------------S-
------------------------S-------------------S-S-------------S--S----------------
------------------------------------SS---S--------------SSSS--------------------
---S-------------------S---------S--SS---------------S-------S------------S---S-
S---S----------------------------SS------------------------S-----------S-----S--
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
-S-------------SS--S--------S----------S----S---------------SSSSS
>forward_1098
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--------------------------------------TCATGTGCTGTTGCCATTGC----------------------
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>reverse_2309
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--------------------------------------------------------------------ACCCCAATACTG
GACTTGGC------------------------------------------------------------------------
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>forward_2054
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----------------------------------AGATTGTTGCCGGGGAGAAG--------------------------
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>reverse_7241
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----------------------------------------GCCTTTGTACACTTGGCACC--------------------
-----------------------------------------------------------------
