>input_sequence_50232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATGGCGTCGCCCATGCTCTCCACGGCCATGGCG
CCACTCCAGGTATGCTGTTCATGTTCCATTCCATGCTTGCGTTGCGTACTGCTTCCCTGTTTGTCACGCACGGTTATGTA
ACTGGACTGCCATCATCTGTGATTACTCGATC--------CAGGGGGGCATGCTGGAGTTCTCCGGGCTGAGGAGCTCGT
CGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCCTTCAGGACATACGCGGTATGACAT
GATCGGTGGAATGTAGTTGCTTGCTTGGTCGCATGCCATGGGAGCGTGTGT--GTGACGCGGCGGTGCTGTGCTTGCAGG
TGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCGATCAACGGGTTCGGGCGCATCGGG
CGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTCATCGCCATCAACGACACCGGAGGCGT
GAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTCGGCATCTTCGACGCGGACGTCAAGCCCGTGGGCGACAACG
CCATCTCCGTCGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACCTGCCGTGGGGTGAGATGGGCATC
GACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCATCTCGAGGCCGGCGCCAAGAAGGT
GCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGCCGACCTCTACACCCACGCCGACA
CCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGCTCGACCAAAAGTTCGGTACGTGC
CCGTCCCCTCTGTCTCTCAAGT---CTCAGCTGAATCTACTTCTTTGAGTAACT-AAAAAATGGAGGTGGCAATGGC--G
CAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGAC
CTGCGCCGTGCCCGCGCCGCGGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAAGGCCGTGGCGCTGGTGCTGCC
CAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCCGTGGTCGACCTTGTGGTGCAG
GTCTCCAAGAAGACCCT---CGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAACGAGCTCAAGGGCATCCT
CGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACCATCGACGCGTCGCTCAGCA
TGGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACA-----------------------------------
-----------------------ACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCGCCGACATCGTCGCCAACCAAT
GGAAGTGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr2B_1_TraesCS2B01G342200
AGGGAACCCACGAAGGCAACCAGTAGGGAACGACGATATCGCGAACGGGGAAGCGCGCTCGACGCTAAAGAAGGACTATC
GTAAGAGCAGGCAACAAGCGCGGCGGCCGGAACAACTGCCGCCGTAACCACGCAACAAGAGCAGCGGAGACGACGGCAAA
AAAAGAACAATGCGCGACAAGGGTTCGCCCACAACAGAGAAAAACAGATCTCAAAACAGATCAAGAGGTATTATAAAACA
TTAGAAGTATAAGGACTAAAGTGAAAAAAGAAAAAATCACAAAGGGAAACCGAAAACCGAAATTCACGGGAGAAGCCGTG
CGCGCGCCAAGTGTCACGCGCGGACCGCATCGGAAAAGTCTCAGGAGCGCTCCGCGCGTGACACTTGGCGCGCGGGGAGC
GCTCCGTTGCGGGGAGCGTTCCTCAATTAGTGATTTTGCAAGAATATGCCAAAACTTTTTGAAAAATATTGCGTGTAGTC
CATCGGGCCCAGGTGCCTTGAGATCGCCTATGCTGAACACTGTCCAGGCCTTATTGACGTTTAACTTTGTGGAGTCACCC
CCGAAACCCCGATCGGAACGGTGCTCTGCTCGACGTCCCGAGGATGGAACGCAGAATATCCAT----CGAGCGAGCATTA
CATCAACAATACACGATGTATGTACATTGCAACAATAATCACAAAATCCTCGAAAGAAAAAAAAATCACAAAAGAACAAG
AAAAAAAC---ATATGCGATCAGGCACATGACGAAGGAAGGGTCGCATGAATGAAGAAGAGAAAAGCCACATATCGACCG
GAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTATCCAAAATCTCATCTATCGCCCAA
TCGCGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCTAACTCGTATATACAGCCACGCCCG
CCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGATCCTTTGGACATGGCGTCGCCCATGCTCTCCACGGCCATGGCG
CCACTCCAGGTATGCTGTTCATGTTCCATTCCATGCTTGCGTTGCGTACTGCTTCCCTGTTTGTCACGCACGGTTATGTA
ACTGGACTGCCATCATCTGTGATTACTCGATC--------CAGGGGGGCATGCTGGAGTTCTCCGGGCTGAGGAGCTCGT
CGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCCTTCAGGACATACGCGGTATGACAT
GATCGGTGGAATGTAGTTGCTTGCTTGGTCGCATGCCATGGGAGCGTGTGT--GTGACGCGGCGGTGCTGTGCTTGCAGG
TGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCGATCAACGGGTTCGGGCGCATCGGG
CGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTCATCGCCATCAACGACACCGGAGGCGT
GAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTCGGCATCTTCGACGCGGACGTCAAGCCCGTGGGCGACAACG
CCATCTCCGTCGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACCTGCCGTGGGGTGAGATGGGCATC
GACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCATCTCGAGGCCGGCGCCAAGAAGGT
GCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGCCGACCTCTACACCCACGCCGACA
CCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGCTCGACCAAAAGTTCGGTACGTGC
CCGTCCCCTCTGTCTCTCAAGT---CTCAGCTGAATCTACTTCTTTGAGTAACT-AAAAAATGGAGGTGGCAATGGC--G
CAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGAC
CTGCGCCGTGCCCGCGCCGCGGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAAGGCCGTGGCGCTGGTGCTGCC
CAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCCGTGGTCGACCTTGTGGTGCAG
GTCTCCAAGAAGACCCT---CGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAACGAGCTCAAGGGCATCCT
CGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACCATCGACGCGTCGCTCAGCA
TGGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACA-----------------------------------
-----------------------ACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCGCCGACATCGTCGCCAACCAAT
GGAAGTGAACGCCGGA---CGGCGGCATTGCCCTGTGAAGTGACTCCTCTCGAAATTTTCCCCAGCCATCGTCACGGATG
ATCGATTCTTTGTAATGAGAATTCAGAGTATCGAACTCCCAACAGCTTCT-TTTTTTTCCTTTCTTTTCTTGTTCTTCTT
TTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAGGAAGTCTCAACGCTGTGCATCT
GTAATATATAC----TATCGTTTGCCAGGTTCTGATGTAGAATTCAACTCGTTCTTGGATTTGGAACCTTCCCATCATTT
TCACCTTTATTG--CTATCTAAAAATGCATGATCAACTCACAAAGAAAAGTTTGAACCATACACGAAAGTTACCATAAAA
TG--AAAAGTTTGAACTTCTAATGGCAATTGCAAAATTTAAGGGAGCACAACCATGCAGCCCATTATCAGAGTTTTTATG
TTATTTTTGCG-AAACTCATTATCAGAGTTATCCACACAAATTGACTCACAAGATAAGAGATTGCGATCTGTGCGTCAAA
CCTAGGTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGGTTGTATTTTCGTCGGACATCAT
GGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAAAGTGTGTGAGTGGTCAAGAATATATGGAAATCTTG
AGGGATAAATATTGCAGACCATACGG---ACAGACCACAG-GGGTGTCTTTCCGCTCTGAAGCACTCAAA----------
-----------------------TGGCCCGTGTCTAACTTAATAGAATCAAGATATTTAGAATTCAGAGTTGAGCTCTCT
CTACTCAATGCCCCATGATGAGATATA-----TGCAGTCTTTATCGATGAAATAGCAAGTACTAAGAACCATTCAAGTAA
ATTCTAGTGCAAGCTAACATGATATATTGAACTTCAACCAGGGTTATTTGGATGACACTACATACGCTAAGTGATGGCAC
TTTCAGGAAAAGAAAAACTACTCTGAAGGA
>chr2D_537
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACGTTTAACTTTGTCGAGTCACCC
CCGAAACTCCGATCGGAACGGTGCTCTGCTCGACGTCCAGAGGATGGAACGCAGAATATCCAT----CGAGCGGGCATTA
CATCAACAATACAGGATGGATGTACATTGCAACAAAT--------------------------AATCACAAAAGAAATAA
AAAAGGAAACTATATGCGATCAGGCACATGACAAAGGAAGGGTCACATGAACGAAGAAGAGAAAAGCCACATATCGACCG
GAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTATCCAAAATCTCATCTCTCGCCCAA
TCGCGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCTAACTCGTATATACAGCCACGCCCG
CCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGATCCTTTGGACATGGCGTCGCCCATGCTCTCCACCGCCATGGCG
CCACTCCAGGTATGTCCAC---GTTCCATTCCATGCTTGCGTCCTACAGTTCTTCCATGTTTGTCACGCACGGTTATGTA
AGTGATTTGCGTCCA---------ACTCGATC--------CAGGGGGGCATGCTGGAGTTCTCCGGGCTGAGGAGCTCGT
CGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTCTCCTTCAGGACATACGCGGTATGACAT
GATCGGTGGAATGTAG---CTTGCTTGGTCGCGTGCCATGGGAGCGTGTGTGCGTGACGCGGCGGTGCTGTGCTTGCAGG
TGAGCACCAGCGGCGGGTCGCGGAAGGCGCCGACGGAGGCCAAGCTCAAGGTGGCGATCAACGGGTTCGGGCGCATCGGG
CGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGATCGCCATCAACGACACCGGAGGCGT
GAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGGACGTCAAGCCCGTGGGCGACAACG
CCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACCTGCCGTGGGGCGAGATGGGCATC
GACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCATCTCGAGGCCGGCGCCAAGAAGGT
GCTCATCACCGCACCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGCCGACCTCTACACCCACGCCGACA
CCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGCTCGACCAAAAGTTCGGTACGTGC
CCGTCCCCTCTGTCTCTCAAGT---CTCCACTGAATCAACTTCTTTAAGTAACTAAAAAAATGGCGGCGGCTATGGC--G
CAGGCATCATCAAGGGAACCATGACCACCACCCACTCATACACCGGCGACCAGAGGCTACTGGACGCGAGCCACCGCGAC
CTGCGCCGTGCCCGCGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAAGGCCGTGGCGCTGGTGCTCCC
CAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCCGTCGTCGACCTCGTGGTGCAG
GTCTCCAAGAAGACCCT---CGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAACGAGCTCAAGGGCATCCT
CGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCCGGTGCTCCGACGTGTCCTCCACCATCGACGCGTCGCTCAGCA
TGGTCATGGGCGACGACATGGTCAAGGTCATCGCGTGGTACGACA-----------------------------------
-----------------------ACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCGCCGACATCGTCGCCAACCAAT
GGAAGTGAACGCCGGACGGCGGCGGCATTGCCCTGTGAAGTGACTCCTCTCGAAATTTTCCCCAGCCATCGTCACGGATG
ATCGATTCTTTGTAATGAGAATTCAGAGTATCGAGCTCCCAACAGCTTCTTTTTTTTTCCTTTCTTTTCTTGTTCTTCTT
TTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAGGAAGTCTCAACGCTGTGCATCT
GTAATATATACGTACTATCGTTTGCCAGGTTCTGATGTAGAATTCAACTTGTTCTTC------GAACATTTCCATCGTTT
TGACCTTTACTG--CTATCTAAACATGCATGATCAACTCAGAAAGAAAAGTTTGAACCATACACGAAAGTTACCATAAAA
TG--AAAAGTTTGAACTTCTGATGGGAATTGCAAAATTTAAGGGAGCACAACCATGCAGCCCATTATCAGAGTTTTTATG
TTATTTTTGCGAAAACTCATTATCAGAGTTATCCACACAAATTGATTCACAAGATAAGAGATTGCGATCTGCG-----AA
CCTAGGTGGATGATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGGTCGTATTTTCGTTGGACATCAT
GGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAGAGCGTGTGAGTGGTCAAGAATATATGGAAATCATG
AGGGATAAATATTGCTGACCATACAATGCACAGACCACAG-GGGTGTCGTTCCGCTCTGAAGCACTCAAATGGATCAAAA
CATCTCGAATCTCTATACCCAAATGGCCCGTGTCTAACTTAATAGAATCAAGATATTTAGAATTCAGAGTTGAGCTCTCT
CTACTCAATGCCCCATGATGAGACATA-----TGCAGTCTTTATCGATGAAATAGCAAGTACTAAGAACCATTCAAGTAA
ATTCTAGTACAAGCTAACATGATATATTGAACTTCAACCAGGGTTCTTCGGATGACACTAAATACACTAAGTGATGGCAC
TTTCAGGAAAAGAAACACTACTCTAAAGGA
>chr2A_537
ACGTTCAACG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TTTGTCGAGTCACCC
CAGAAACTCGGATCGAAACGGTGCTCTGCTCGACGTCCACAGAACGGAACGCACATTATCCAGCGAGCGAGCGAGCATTA
CATCAACAATACAGGATGTATGTACATTGCAACAAAT--------------------------AATCACAAAAGAACAAG
AAAAAAAC---ATATGCGATCAGGCACATGACGAAGGAAGGGTCACATGAATGAAGAAGCGAAAAGCCACATATCGACCG
GAATAGCGAAGTGTGGGAGCCGCGATGGCGGGCACTGGCAGCCATACATTGGGCTATCCAAAATCTCATCTCTCGCCCAA
TCCGGGCCTCACGATCTCAATTCCCACCCCGCGTGCACCACAAGCTCCAATCCCCTAACCCGTATATACAGCCACGCCCG
CCTCACCGTCCTTGATCTTCCCCCCTATCTGATCAGACCCTTTGGACATGGCGTCGCCCATGCTCTCCACGGCCATGGCG
CCACTCCAGGCATGTCC--CATGTTCCATTCCATGCCTGCGTCCTACAGTTCTTCCCTGTTTGTCACGCACGGTTCTGTA
AGTGATTTGCGTCCA---------ACTCGAATACTCGATTCAGGGGGGCATGCTGGAGTTCTCCGGGCTGAGGAGCTCGT
CGTCGCTGCCGCTCCGGCGGAATGCCACCTCCGACGACTTCATGTCCGCGGTTTCCTTCAGGACGTACGCGGTATGACAT
GATCGGCGGAATGTAG---CTTGCTTGGCCGCGTGCCATGGGAGCGTGTGTGCGTGACGCGGCGGCGCTGTGCTTGCAGG
TGAGCACCAGCGGCGGGTCGCGCAAGGCGCCGACGGAGGCCAAACTCAAGGTGGCGATCAACGGGTTCGGGCGCATCGGG
CGCAACTTCCTGCGGTGCTGGCACGGGCGCGGCGACAGCTCGCCGCTGGAGGTGATCGCCATCAACGACACCGGAGGCGT
GAAGCAGGCGTCCCACCTCCTCAAGTACGACTCCACGCTGGGCATCTTCGACGCGGACGTCAAGCCCGTGGGCGACAACG
CCATCTCCGTGGACGGCAAGGTGATCAAGGTGGTGTCCGACCGCAACCCCTCCAACCTGCCGTGGGGCGAGATGGGCATC
GACCTCGTCATCGAGGGCACCGGCGTCTTCGTCGACCGCGCCGGCGCGGGCAAGCATCTCGAGGCCGGCGCCAAGAAGGT
GCTCATCACCGCGCCCGGCAAGGGCGACATCCCCACCTACGTCTGCGGCGTCAACGCCGACCTCTACACCCACGCCGACA
CCATCATCAGCAACGCCTCCTGCACCACCAACTGCCTCGCCCCCTTCGTCAAGGTGCTCGACCAAAAGTTCGGTACGTGC
CCGTCACCCCGTCCCGTCTCTCTCCCTCAACTGAATCAACTTCTTTAAGTAACTAAAAA--TGGCGGTGGCAATGGC--G
CAGGCATCATCAAGGGAACCATGACCACAACCCACTCCTACACCGGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGAC
CTGCGCCGTGCCCGTGCCGCCGCGCTCAACATCGTGCCCACCTCCACCGGCGCGGCCAAGGCCGTGGCGCTGGTGCTGCC
CAACCTCAAGGGCAAGCTCAACGGGATCGCGCTCCGGGTGCCCACCCCCAA-CGTGTCCGTCGTCGACCTCGTGGTGCAG
GTCTCCAAGAAGACCCT---CGCCGAGGAGGTGAACCAGGCGTTCCGCGACGCCGCCGCCAACGAGCTCAAGGGCATCCT
CGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCAGGTGCTCCGACGTGTCCTCCACCATCGACGCGTCGCTCAGCA
TGGTCATGGGAGACGACATGGTCAAGGTCATCGCGTGGTACGACA-----------------------------------
-----------------------ACGAGTGGGGTTACTCCCAGAGGGTCGTCGACCTCGCCGACATCGTCGCCGACCAAT
GGAAGTGAACGCCGGACGGCGGCATTATTGCCCTGTGAAGTGACTCCTCTCGAAATTTTCCCCAGCCATCGTCACGGATG
ATCGATTCTTTGTAATGAGAATTCGAAGTATCGAGCTCCCAACAGCTTCT-TTTTTTTCCTTTCTTTTCTTGTTCTTCTT
TTTTCTTTCTCTGATTTTTCAGTGTCCAGACACGGATTATAATAGACTTCCTGCAAAGGAAGTCTCAACGCTGTGCATCT
GTAATATATAC----TATCGTTTGCCAGGTTCTGATGTAGAATTCAACTTGTTCTTC------GAACATTTCCATCGTTT
TGACCTTTACTG--CTATCTAAACATGCATGATCAACTCAGGAAGAAAAGTTTGAACCATACACGAAAGTTACCATAAAA
TG--AAAAGTTTGAACTTCTGATGGCAATTGCAAAATTAAAGGGAGCACAACCATGCAGCCCATTATCAGAGTTTTTATT
TCATTTGTGCGAAAACTCATTATCAGAGTTGTCCACACAAACTGACTCACAAGATAAGAGATTGCGATCTGCGCGCCGAG
TCTAGGTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAACTTTTGTGGGTCGTATTTTCATTGGACATCAT
GGTTCACATGTTTGCCATCC----TATATGCTTGGTGCCAATCAGT--GTGTGAGTGGTCAAGAATACATGGAACTCATC
AGGGATAGATATTGCAGACCATACAATGCACAGACCACAGAGGGTGTCTTTCCACTCTGAAGCATTCAGATGGATCAAAA
CATCTCGAATCTCTATACCCAAATGGCCCGTGTTTAACTTGATAGAATCAAGATATTTAGAATTCAGAGTTGAGCTCTCT
CTACTCAATGCCCCATGATAAGACATACTGTATGCAGTATTTATCGATGAAATAGCAAGTACTAAGAACCATTCAAGTAA
ATTCTAGTAGAAGCTAACATGATATATTGAACTTCAACCAGGGTTCTTTGGATGACACTTCATACGCTAAGTG-------
------------------------------
>chr4D_1831
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CAGCAACGCTTCCTGCACCACCAACTGCCTCGCGCCATTCGCCAAGGTCCTGGACGAGGAGTTCGGTAAGAA-
------CCGTTGCCCCTCTTTT---TTCACCTTGATCTGAGCCAGTTCTGATCGACTGTCCCGTGGTGCGCGCGCGCGTG
CAGGAATCGTGAAGGGGACCATGACCACGACGCACTCGTACACGGGCGACCAGAGGCTGCTGGACGCGTCCCACCGCGAC
CTGCGGAGGGCGAGGGCGGCGGCGCTGAACATCGTGCCGACGAGCACGGGCGCCGCCAAGGCCGTCTCCCTGGTGCTGCC
GCAGCTCAAGGGCAAGCTCAACGGCATCGCGCTCCGCGTGCCCACGCCCAA-CGTCTCCGTGGTGGACCTCGTCATCAAC
ACCGTCAAGACCGGCATCACCGCCGACGACGTGAACGCGGCGTTCCGCAAGGCCGCCGACGGGCCGCTCAAGGGCATCCT
CGACGTCTGCGACGAGCCGCTCGTGTCCGTCGACTTCCGCTGCTCCGACGTCTCCACCAGCATCGACGCTTCCCTCACCA
TGGTCATGGGCGACGACATGGTCAAGGTCGTCGCCTGGTACGACA-----------------------------------
-----------------------ACGAGTGGGGCTAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr2D_2154
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CTCAACGGGAT--CGCTCCGGGTGCCCACCCCCAAACGTATCCGTGGTCGACCTCGCGGTGCAG
GTCTCCAAGAAGACCCT---CGACGAGGAGGTGAACCAGGCGTTCCACGACGGCGCGGCCAACGAGCTCAATGCCTTCCT
CGACGCCTGCCATGAGCCGCTCGTGTCCATTGATTTCAGGTGCTCCGACGTGTCCTCCACCATCGACGCGTCGCTCAGCA
TGATCATGGGAGACGACATGGT-AAGGTCATCGCATGGTACGACGAGTGGGGTCGCTCAGCATGGTCATGGGAGACGACA
TGGTAAGGTCATCGCATGGTACGACGAGTGGGGTTACTCCCAGAGGGTAGTCGACCTCGCCGACACCATCGCCAACCAAT
GGAAGTGAACGCCG-----------CATTGCCCTGTGAAGTGACTCCTCA--AAATTTTCCCCAGCCATCGTCACGGATG
ATCGATTCTTTGTAATGAGAATTCAAAGTGTCAAGCTCCCAACAGCTTCT-T-------CTTTCTTTTGTT----TTCTT
CTTTCTTTCTCTGATTTT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr2D_2697
CAACGCACGAGCATTCTACTAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TATAC----TATCGTTTGCCCGATTCTGATGTAGAATTCAACTCGTTCTTC------GAACCTTTCCATCATTT
TGACCTTTTATTGTCTATCTAAACATGCATGATCAACTCAAAAAGAAAAGTTTGAACCATAAACGGAAGTTACCATAAAA
AATAAAAAAATTGAACTTCTGATGGCAATTGCAAAATTTAAGGGAGCACAACCATGCAGCTCATTATCAGGGTTGAT---
----------------TCATTATCAGAGTTATCCACACAAACTGACTCACAAGCAAAGAGATTGTGATCTGCGTGCCGAG
CCTAGTTG---GATGATGGCATGAACTACTTAGAGAGTAGACCCACAGCTTTTGTGGGTAGTATTTTCGTTGGACATCAT
GGTTCACATGTTTGCCATCCTTTATATATCCTTGGTGCCAATCAGA--GTGTGAGTGGTCAAGAATACATGGAACTCATG
AGAGATGAATATTGCAGGCCATACAATGCACAGACCACAGAGGGTGTCTTTCCACTCTGAAGCACTCAAATGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>SNPs
-S-SSSS---SS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S---------
-------S------------------------------S-----------------------------------------
-------------S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
--------------------------------------------S-----------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------SSSSS-----------------------SSSSS-S-S-----------------------------
-S--SSS---SSS--SSSSSSSSS--------------------------------------------------------
--------------------------------------------------------------------------------
----------------SSS-------------S-----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------S----------------------------------------
----------S--------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S----------------S-----------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------SSSSSSS-------S---------
-S-------S-------------S----------------S---------------------------------------
--------------------S-----------------------------------------------------------
-----------------------------------------------------------------------S---S-S--
-----------------------------------------------------------S----------S---------
--------------------------------------------S--S-----------------------------S--
------------------------SS------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------S------------------------------------S----------------------------------
---------------S--------S-----
>forward_514
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GCCTTGAGATCGCCTATGCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_2231
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGTGGTGCAG
GTCTCCAAGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_1059
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CCACTCCAGGTATGCTGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_3112
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TGCGTCAAA
CCTAGGTGGAT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
