>input_sequence_50170
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------ATGCGGCCTCCGCTTCCCCTCCTCCCGCCGCACCTCCTCCGCCGCCTCGACGGCCGCACCCTCTCCACGCCGCT
GCTCGACCCCCTCATCCGCACCACCTCTTCCTCGCCCTCCACCCCGCACCACTCCTTCTCCCTCTACCTCCTCCTCCTCC
GCTCCGCGCTGCGGCCCTCCCACCTCACCTTCCCCTTCCTTGGCCGCGCCGCCGCTCGCCTCGCCTCCCCGCGCCTCGCC
CTCTCGCTCCACGCGCACCCGCTCCGGCTCGGGCTCCTCCCCTGGGACATCTATGTCGCGAATTCACTCGTCCACATGTA
CGCGGCCTGCGCGCTCCCCGACCTCGCCCGCCGCCTATTCGACGAAATACCGCGGCCGAACCTTGTTTCCTGGAATGCCC
TTCTCGATGGCTACGCCAAGTGCCACGACCTCCTCTCCGCCCGCTGCGTGTTCGACCGGATGCCCCAGCGGGACGTGGTC
TCCTGGAGCGCCATGATCGACGGGTGCGTCAAGTGCGGGGAGCATCGTGAGGCGCTGGCGTTGTTTGAGATGATGGAGAC
CACGGGGGCTGGCAATGGTGTTAGAGCGAATGATGTCACAATGGTCAGTGTGATAGGCGCGTGTGCTCATCTGGGGGACC
TTGGGCGGGGAAGGCAGATGCATCGGTACCTTCAGGAGCGTGGCTTCCTGCTGAACCTCAGGCTCGCCACCTCTCTTGTG
GACATGTATGCCAAGTGCGGGGCAATCAGCGAGGCGCTTGAGGTGTTTCGGGTCGTGCCAGTGACCAGCACCGATGTTCT
GATATGGAACGCTGTGATTGGTGGACTTGCAGTGCATGGGTTGAGCATGGAGTCGGTGGAGATTTTCCAGGAGATGCAAC
ATTCTGGTGTTGTCCCAGATGAGATCACATACCTTGGTTTGTTAAGTGCTTGCGTACATGGTGGTCTAGTGGGTGAGGCC
TGGAGGTTATTTCACTCACTTGAAGCTCAAGGGCTCAGACCACATGTTGAGCACTATGCTTGTCTTGTAGATGTGCTTGG
TCGAGCGGGCCGCTTGGAGGAAGCATACGGTGTTGTTAAGAGTATGCCAATGGAACCCAATGTGTCTGTACTTGGTGCTC
TCTTGAATGCATGCCATCTGCATGGATGGGTAGAGTTGGGGGAGGTAGTCGGCAGGCAGCTTGTTCAATTGCAGCCAGAT
CATGATGGCAGGTACATTGGGTTGTCCAATATCTATGCTATTGCTAGGCGGTGGCAAGAGGCAAAGAAAGCAAGAAAGGT
GATGGAGGAGAGAGGAGTGAAAAAGATCCCTGGGTTTAGCGAGATTGATGTCGGTGGAAGGCTCCACAGGTTTATTGCCC
ATGACAAGGCTCATTCTGGCTCAAGAGAGATATATGCGTTGCTTAATCTTATAACGGTGGAGATGAAAATGAAGGATGAT
GTTGCCATTCCAGAGTACTTCT-TACATACAGATAGGACAATGGGTGCCTAA----------------------------
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>chr1A_1_TraesCS1A01G141200
GTGGTTAATGGACAATAATTTCATTTTTAGCATGTCGATTATTGAATTACCACACAAAAATTGATTGTGCTACCTAGTTC
ATGTTTA-TGGTGCACTCTTTTATCAGTGAGTTAGGATTGTGTCAATCCCTTACTCCTTTGATCATATCATCTTGGTCCT
AAAAAGAAAGATTGTTCTCGAGCTTAGTAACATATCGATGGTTTGTGATTTTCCGAATATCTTCTCGAAAGTATTACTAG
GTTGTCCCCAGACCGTTATCTTGAGTTCGTGATCAAGTTGAGTTT--CCTCTAAACCACGCCTTCTCCGAGAATTTGTGT
TGGATACCCTTGAGCTAGTTGGTTATGCTTAAATAACAACTTGGAGAGCTGGAAGATAAAAGCTTTGCCTAATGTAGTTC
ATTC-AAAGGAATATCGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGAAGGAAGATGGTATCTTCAT
CAATTGACCTTCGTGATCAATTGTTGGATCTATTGTCCGGCGGGGCAAAGATCATGCA-CGCATCTGTTGCATGGCTGGA
TGGTGGTGGCTCTAGATGAGGGTCGGGAGGGAGAAAATGAAGATTGGCTGCTGTTGAGAAACACATGATTGACTGCTGAG
AGAGAAGAGCGATGAGATAGATTTTATAGAGACAAACACCTAAGGAGATAAGATTCAACAACGATGTATGAATCACGGGG
ACACGCGTCGAGCAGCCGAGGCGGTCGACTCACTGACTGTAATTAGCCGATTGACAGGAAAGCTTTTCC-TTATCATAGG
AGGATGATTGGACGAATGGATGATGGGAACAAAAATGAAACATGAAACTGTGGTAGAGATAGGGATTTTCTACGGACAGT
GTTTTTATACTTCATTA----------------------------------------AAAGCAGATCTCGCATGTGAGAA
AATGGAGTGACCAAACGTTGTTGTTGCAAAATAATGCCGGCTCGATCAATTCCCGCGCTTGCTCTCCTCCTTCCGGTTTG
AGACGAATGCGGCCTCCGCTTCCCCTCCTCCCGCCGCACCTCCTCCGCCGCCTCGACGGCCGCACCCTCTCCACGCCGCT
GCTCGACCCCCTCATCCGCACCACCTCTTCCTCGCCCTCCACCCCGCACCACTCCTTCTCCCTCTACCTCCTCCTCCTCC
GCTCCGCGCTGCGGCCCTCCCACCTCACCTTCCCCTTCCTTGGCCGCGCCGCCGCTCGCCTCGCCTCCCCGCGCCTCGCC
CTCTCGCTCCACGCGCACCCGCTCCGGCTCGGGCTCCTCCCCTGGGACATCTATGTCGCGAATTCACTCGTCCACATGTA
CGCGGCCTGCGCGCTCCCCGACCTCGCCCGCCGCCTATTCGACGAAATACCGCGGCCGAACCTTGTTTCCTGGAATGCCC
TTCTCGATGGCTACGCCAAGTGCCACGACCTCCTCTCCGCCCGCTGCGTGTTCGACCGGATGCCCCAGCGGGACGTGGTC
TCCTGGAGCGCCATGATCGACGGGTGCGTCAAGTGCGGGGAGCATCGTGAGGCGCTGGCGTTGTTTGAGATGATGGAGAC
CACGGGGGCTGGCAATGGTGTTAGAGCGAATGATGTCACAATGGTCAGTGTGATAGGCGCGTGTGCTCATCTGGGGGACC
TTGGGCGGGGAAGGCAGATGCATCGGTACCTTCAGGAGCGTGGCTTCCTGCTGAACCTCAGGCTCGCCACCTCTCTTGTG
GACATGTATGCCAAGTGCGGGGCAATCAGCGAGGCGCTTGAGGTGTTTCGGGTCGTGCCAGTGACCAGCACCGATGTTCT
GATATGGAACGCTGTGATTGGTGGACTTGCAGTGCATGGGTTGAGCATGGAGTCGGTGGAGATTTTCCAGGAGATGCAAC
ATTCTGGTGTTGTCCCAGATGAGATCACATACCTTGGTTTGTTAAGTGCTTGCGTACATGGTGGTCTAGTGGGTGAGGCC
TGGAGGTTATTTCACTCACTTGAAGCTCAAGGGCTCAGACCACATGTTGAGCACTATGCTTGTCTTGTAGATGTGCTTGG
TCGAGCGGGCCGCTTGGAGGAAGCATACGGTGTTGTTAAGAGTATGCCAATGGAACCCAATGTGTCTGTACTTGGTGCTC
TCTTGAATGCATGCCATCTGCATGGATGGGTAGAGTTGGGGGAGGTAGTCGGCAGGCAGCTTGTTCAATTGCAGCCAGAT
CATGATGGCAGGTACATTGGGTTGTCCAATATCTATGCTATTGCTAGGCGGTGGCAAGAGGCAAAGAAAGCAAGAAAGGT
GATGGAGGAGAGAGGAGTGAAAAAGATCCCTGGGTTTAGCGAGATTGATGTCGGTGGAAGGCTCCACAGGTTTATTGCCC
ATGACAAGGCTCATTCTGGCTCAAGAGAGATATATGCGTTGCTTAATCTTATAACGGTGGAGATGAAAATGAAGGATGAT
GTTGCCATTCCAGAGTACTTCT-TACATACAGATAGGACAATGGGTGCCTAATGGATCTCTCAAAAGTAAGTTC---TGC
AGCATTCTGATCATGCATTCTGCCTGAATCAGGGGAAATTCATTGTAGCTCTTGGTTCTGGTTACTTATGCAGACTTGGT
TTGTGTTGAAAATTTGACTGCCAAACATAACCTAGTTGTGTGGAGATCCATCAAGAGCCAGATATTTGAAGAGGAGATGA
AATACATTTGTGCGCTGCTACAGGAAGCAGAGCTATAGAAGAAGTATGACGTGTGCATATAGTCTTGAGATTCTTTGAGC
TGCCAGCGGAAAAGTGCATTCTGTTGCTGGACAGCAATCAGAGAGTACCAAACATCTTCAGTAACTGTTTCACCTATGGC
TTCTGCTTGTATGGATTATTGATCATCAGATAGATAGATAAGGGCAAGAACATTCCAAAGACCACTGACTATTTATGCCA
GATGGTGCTGAACCATGTCGTAGAGATTTCATCAATATACATTACAAGTATGCTTCACAAATTGATACGCTGGCCATAGT
TTTTCTCAAGAATCTGCAGTTGTAGAAATGTACCAATTGCTAGGATCATGTGCCAGAACTGTGTATGTAGCCTGTGCTGA
GCTTTGCCCGTTAACGAGATCTCTGGTTGTGTATAGCGCTCAAAGGTGAAACCACACTGCACTTATTCCTATTTTATTTT
TTTAATCTTGGTTCCCAAAATTCGTGTTGCTTAGTTATATATTTCTATCAGGCCAAACATCCGGAGCATGCTATATTTCA
TATGCGATTTGTGCTATGAATAGTGAAATTATTTTCCTGAAAGTCATATGGTACTTTACTAAAGAAACAATGTTTTGTTT
AATACAGAGTACACAAAGAGCAGTTAGCAAAATAACATGACCTGTGAATCCACCTTTTT--CCCCACATTTTCTCCTTTT
TTTCTTGTTTTATAATAACCTC-TCTTCACATTATCAATTTAATTTTGTAAAAGTTAGAACACATTAATTCTATTTTTTA
TGGATATACACAGGCAAA
>chr1A_1
GTAGTTAATGGACAATAATCTTATTCTTAGTATGTTGGTTATTGAATCACCATTCTAAGATTGATCGTGCTACCTAGTCC
TTATTTCCTGGTGCACTCTTTGATTGATGAGTTAGGATTTTGTCAAGTCCTCGCTCATTTGATCATATCATCTTGC-CCT
GAAAAGCAAGATTGTTCTCGAGCTTAGTAACATATCGGTGGTTCGTGATTT-CCGAAGATCTTCTCGGAAGTATTACTAG
GTCGTCACCTGACCGTTATGTTGAGCTCGTGATCAAGTTGGTTTCT---TGTGAACCACCCTTTCTCCAAGAATCTGTGT
TGGATATCCCTGAGCTAGTTGGTTAAGC-TAGACAACAACTTGGAGAATTGGAAGATAAAAACTT-GCCTGACTTAGTTC
ATGT-TAAGGGATATCTT-TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTG--AAGAAAGATGGTATCTTCAT
CAATTGGTCCTTGTGAACAATTGTTGGATCTATT----------------------------------------------
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>chr1D_1
GTAGTTAATGGACAATAATTTTATTCTTAGCGTGTCGATTATAG-ATTACCACACAAAGATTGATTGTGCTACCTAGTCC
ATGTTTA-TGGTGCACTCTTTGATCACTGAGTTAGGATTGTGTCAATCCCTCACTCCTTTGATCATATCATTTTGGTCCT
GAAAAGAAAGATTGTTACCAAGCCTAGTAACATATCGATGGTTCGTGATTTTTCGAATATCTTCTCGAAAGTATTACTAG
GTTGTCCCCTGACCGTTATGTTGAGTTCGTGATCAAGTTGGTTTT--CCTCTAAACCACCCTTTCTCCGAGAATCTGTGT
TGGATACCCCTGAGCTAGTTGGTTATGCTTAAACAATAACTTGGAGAGTTGAAAGATAAAGGATTTGCCTAATGTAGTTC
ATTC-AAAGGGATATCTT-T-----------------------TGTGTGTGTGTGTTG--AAGAAAGATGATATCTTTAT
CAATTGACCTTCGTGATCAATTGTTGGATCTATTGTACGGCGGGGCGGAGATCATGCGTCGCATCTGTTGCATGGCTGAA
TGGTGGTGGCTCTAGATGAGAGTCGGTAGGGAGAAAGTGAAGAGTGGCTGCTG-------------------------AG
AGAGAAGAGCGACGAGATAGATTTTCTAGAGACAAACATCTGAGAAGATAAGGTTCAACAACGATGTGTGAATCACATGG
ACACGCGTCGAGCAGCCGATGCGGTCGACCCACTGGCTGTAATCAGCCGACTGATAGGAAAGCTTTTCCCTTATCATAGG
-GGAAGGTTGGACGAATGGATGATGGGAAAG-AAATGAAACATGAAATTGTGATAGGGATAGAGA--------------T
GTTTTTATACTTCATTAGCAAGAAATAATAAAAATGATAACATTTTATACTTGCTGAAAAGCCGATCTCGCATGTGAGGA
AATGGAGTGACCAAACGTTGTTGTTGCAAAATAATGCCGGCTCAATCAATTCCCGCCCTTGCTCTCCTCCTTCCGGTTCG
AGACGAATGCGGCCTCCG------CTCCTCCCGCCGCACCTCCTCCGCCGCCTTGACGGCCGCACCCTCTCCACGCCGCT
GCTCGACCCCCTCATCCGCACCACCTCTTCCTCGCCCTCCACCCCGCACCACTCCTTCTCCCTCTACCTCCTCCTCCTCC
GCTCCGCGCTGCGGCCCTCCCACCTCACCTTCCCCTTCCTTGGCCGCGCCGCCGCTCGCCTCGCCTCCCCGCGCCTCGCC
CTCTCGCTCCACGCGCACCCGCTCCGGCTCGGGCTCCTCCCCTGGGACATCTATGTCGCGAACTCTCTCGTCCACATGTA
CGCGGCCTGCGCCCTCCCGGACCTCGCCCGCCGCCTGTTCGACGAAATACCGCGGCCGAACCTTGTCTCCTGGAATGCAC
TTCTCGATGGCTACGCCAAGTGCCACGACCTCCTCTCCGCCCGCTGTGTGTTCGACCGGATGCCCCAGCGGGACGTGGTC
TCCTGGAGCGCCATGATTGACGGGTGCGTCAAGTGCGGGGAGCATCGTGAGGCGCTGGCGTTGTTCGAGATGATGGAGAC
CACGGGGGCTGGCAATGGTGTTAGAGCGAATGATATCACAATGGTCAGTGTGCTAGGCGCGTGTGCTCATCTGGGGGACC
TTGGGCGGGGAAGGCAGATGCATCGTTACCTTCAGGAGCGTGGCTTCCTGCTGAACCTCAGGCTCGCCACCTCTCTTGTG
GACATGTATGCCAAGTGCGGGGCAATCAGCGAGGCGCTTGAGGTGTTTCGGGCCATGCCAGTGACCAGCACCGATGTTCT
GATATGGAATGCTGTGATTGGTGGACTTGCAGTGCATGGGTTGACCATGGAGTCGGTGCAGATTTTCCAGGAGATGCAAC
ATTCTGGTGTTGTGCCAGATGAGATCACATACCTTGGTTTGTTAAGTGCTTGCGTACATGGTGGTCTAGTGGGTGAGGCC
TGGAGGTTATTTCGCTCACTTGAAGCTCAAGGGCTCAGACCACATGTCGAGCACTATGCTTGTCTTGTAGATGTGCTTGG
TCGAGCGGGCCGCTTGGAGGAAGCATATGGTGTTGTTAAGAGTATGCCAATGGAACCCAATGTGTCTGTACTTGGTGCTC
TCTTGAATGCATGCCATCTGCATGGATGGGTAGAGTTAGGGGAGGTAGTCGGCAGGCAGCTTGTCCAATTGCAGCCAGAT
CATGATGGCAGGTACATTGGGTTGTCCAATATCTATGCTATTGCTAGGCGGTGGCAAGAGGCAAAGAAAGCAAGAAAGGT
GATGGAGGAGAGAGGAGTGAAAAAGATCCCTGGGTTTAGCGAGATTGATGTCGGTGGAAGGCTCCACAGGTTTATTGCCC
ATGACAAGGCTCATTCTGGCTCAAGAGAGATATATGCGTTGCTTAATCTTATAACGGTGGAGATGAAAATGAAGGATGAT
GTTGTCATTCCAGAATACTTCTGTACATACAGATAGGACAATGGGTGCCTAATGGATCTCTCAAAAGTAAGTTCTCCTGC
AGGATTCTGATCATGCATCTTGTCTGAATCAGGGGAAATTCATTGTAGCTCTTGGTTCTGGTTACTTATGCAGACTTGGT
TTTTGTTGAAAATTTGACTGCCAAACATAACCTAGTTGTGAGGAGATCCATCAAGAGCCAGATATTTGAAGAGGAGATGA
AATACATTTGTGCGCTGCTACAGGAAGCAGAGCTATAGAAGAAGTATGACGTGTGCATATGGTCTTGAGATTCTTTGAGC
TGCCAGCAGAAAAGTGCATTCTGTTGCTGGACGGCAATCAGAGAGTA---AACATCTTCAGTAACTGTTTCACCTATGGC
TTCTGCTTGTATGGATGATTGATCATC----AGATAGATAAGGGCAAGAACATTCCAAAGACTGCTGACTATTTATGCCA
GATGATGCTGAACCATGTCGTAGAGATTTCATCAATATACATTACAAGTATGCTTCACAAATTGATACACTGGCCATAGT
TTTTCTCAAGAATCTGCAGTTGTAAAAATGTACCAATTGCTAGGATCATGTGCCAGAACTGCGTATGTAGCCTGTGCTGA
GCTTTGCCCGTTAACCAGATCTCTGGTTGTGTATAGCGCTCAAAGGTGAAACCACACTGTACTTATTCCTATTTTATTTT
TT-AATCTTAGTTCCCAAAATTAGTGTTGCTTAGTTATATATTTTTGTCATGCCAAACATCCGGAGCACGCTATATTTCA
TATGCGATTTGTGCTATGAATAGTGAAATTATTTTCCTGAAAGTCATATGGTACTTTACTAAAGAAACAATGTTTTGTTT
AATATAGAGTACACAAAGAGCAGTTAGCAAAATAACATGACCTGTGAATCCGCCTTTTTCC-CCCACATTTTCTCC-TTT
TTTCTTGTTTTATAATAACCTCATCTTCTCATTATCAATTTAATTATGTAAAAGTTATAACACATTGATTCTATTTTTTA
TGGATATACACAGGCAAA
>chr4A_1
GTGGTTAATGGACAATAATCTC-TCCTTAGCGTGTTGGTTATTGAGTCACCATCCTAAGGTTGATCGTGCTACCTAGTCC
GTTTTTCCTGGTGCACTCTTCGATCAATTAGTTAGGATTGTGTCAATCCCTCACTCTTTTGATCATATCATCTTGC-CCT
GAAAAGCAAGGTTGTTCTCGAGCTTAGTAACATACCGGCGGTTCGTGATTTTCCGAATATCTTCTCGAAAGTATTACCAG
GTGGTCCCCTGACCGTTATGTTGAGCTCGTGATCAAGTTGGTTTCT---TGTGAACCACCCTTTCTCCAATAATCTGTGT
TGGATACCCCTGAGCCAGTTGGTTCAGC-TAAACAACAACTTGGAGAGTTGGAAGATAAAAGCTT-GTCCGACTTAGTTC
ATCACTAAGGGATATCCT-TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTG--AAGAAAGATGATATCTTCGT
TGATTGATCCTCGTGATCAGTTGTCGGTGCTATTGTC-------------------------------------------
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>chr1B_4
GTTAAA--TGGACAATAACGTCATCCTTAGCGAGTTGACTATTGAATCATCACCCTAAGGTTGATCGTGCTACCTAGTCC
A-TTTTCCTGGTGCACTCCTCGATTGATGAGATAGGATTTTGTTAAGTCCTCGCTCATTTGATCATATCGTCTTGC-CCT
GAAAAGCAAGATTGTTCTCGAGCTTAGTAACATATCGGTGGTTCGTGATTTTCCGTATATCTTCTCGGAAGTATTACCAG
GTTGTCACCTGACCGCTATGTTGAGTTCGTGATCAAGATG-GTCT--CCTGTAAACCACCCCTTCTCCAAGAATCTGTGT
GGGATACCCCTGAGCTAGTTGGTCAAGC-TAAACAACAACTTGGAGAGTTGGAAGATAAAAGCTT-GCCTGACTTAGTTC
ATGT-TAAGGGATATCTT-TTTTT-TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTG--AAGAAAGATGGTATCTTCAT
CAATTGGTCCTTGTGAACAATTGTTGGATCTATTATC-------------------------------------------
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>chr6B_4
---GTTAATGGACAATAATTTCATTCTTAGCGTGTTGGTTTTTGAATCACCATTCTAAGATAGATTGTGCTACCTAGTCC
TTATTTCCTGGTGCACTCTTTGATTTATGAGTTAGGATTTTGTCAAGTCCTCGCTCATTTGATCATATCATCTTGC-CCT
GAAAAGCAAGATTGTTCTCGAGCTTAGTAACATATCGGTGGTTCGTGATTTTCCGTATATCTTCTCGGAAGTATTACCAG
GTTGTCACCTGACCGCTATGTTGAGTTTGTGATCAAGTTGATTTATACCTGTAAACCACCCTTTCTCCAAGAATTAGTGT
CGGATACCCCTGAGCTAGTTGGTCAAGC-TAAACAACAACTTGGAGAGTTGGAAGATAAAAGCTT-GTCCGACTTAGTTC
ATGT-TAAGGGATATCTTGT-------TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTG--AAGCAAGATGATATCTTCAT
CAATTGGTCCTTGTGAACAATTGTTGGATCTATTATC-------------------------------------------
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>chr3A_4
---GTTAATGGACATTAATATCATTCTTAGCGTGATGGTTATTGAATCATCACCCTAAGGTTGATCGTGCTACCTAGTCC
TTATTTCCTGGTGCACTCTTCGATCAACGAGTTAGGATTTTGCCAAACCCTTGCTCTATTGATCATATCGTCTTGC-CCT
GAAAAGCAAGATTGTTCTCGAGCTTAGTAACATATCGGTGGTTCGTGATGTTCCGAATATCTTCTCGGAAGTATTACTAG
GTTGTCACCTGACCGCTATGTTGAGTTCGTGATCATGTTGGTTTT--CCTCCAAACCACCCATTCTCCAAGAATCTGTGT
GGGATACCCCTGAGCTAGTTTGTTAAGC-CAAACAACAACTTGGAGAGTTGGAAGATAAAAGCTT-GTCTGACTTAGTTC
ATGT-TAAGGGATATCTT-TTTG--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTG--AAGAAAGATGATATCTCCAT
CGATTGGTCCTCGTGATCAGTTGTTGGATCTATTG---------------------------------------------
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>chr1B_894
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-----------------------------------------------------------AGCAGATCTCGCATGTGAGGA
AATGGAGTGACCAAACGTTGTTGTTGCAAAATAATGCCGGCTCAATCAATTCCCGCGCTTGCTCTCCTCCTTCCGATTCC
TGACGAATGCGGCCTCCG------CTCCTCCCGCCGCAGCTCCTCCGCCGCCTCGACGGCCGCATCCTCTCCACGCCGCT
GCTCGACCCCCTCATCCGCACCACCTCTTCCTCGCCCTCCACCCCGCACCACTCCTTCTCCCTCTACATCCTCCTCCTCC
GCTCCGCGCTGCGGCCCTCCCACCTCACCTTCCCCTTCCTTGGCCGCGCCGCCGCTCGCCTCGCCTCCCCGCGCCTCGCC
CTCTCGCTCCACGCGCACCCGCTTCGGCTCGGGCTCCTCCCCTGGGACATCTATGTTGCGAATTCACTCGTCCACATGTA
CGCGGCCTGCGCGCTCCCGGACCTCGCCCGCCGCCTATTCGACGAAATACCACGGCCGAACCTTGTCTCCTGGAATGCCC
TTCTCGATGGCTACGCCAAGTGCCACGACCTCCTCTCCGCCCGCTGTTTGTTCGACCGGATGCCCCGGCGGGACGTGGTC
TCCTGGAGTGCCATGATCGACGGGTGCGTCAAGTGCGGGGAGCATCGTGAGGCGCTGGCGTTGTTCGAGATGATGGAGAC
CACGGGGGCTGGCAATGGTGTTAGAGCGAATGATGTCACAATGGTCAGTGTGCTAGGCGCGTGTGCTCATCTGGGGGACC
TTGGGCGGGGAAGGCAGATGCATCGGTACCTTCAGGAGCGTGGCTTCCTGCTGAACCTCAGGCTCGCCACCTCTCTTGTG
GACATGTATGCCAAGTGCGGGGCAATCAGCGAGGCGCTTGAGGTGTTTCGGGCCGTGCCAGTGACCAGCACCGATGTTCT
GATATGGAACGCTGTGATTGGTGGACTTGCAGTGCATGGGTTGACCATGGAGTCGGTGCAGATTTTCCAGGAGATGCAAC
ATTCTGGTGTTGTGCCAGATGAGATCACATACCTTGGTTTGTTAAGTGCTTGCGTACATGGTGGTCTAGTGGGTGAGGCC
TGGAGGTTATTTCGCTCACTTGAAGCTCAAGGGCTCAGACCACATGTCGAGCACTATGCTTGTCTTGTAGATGTGCTTGG
TCGAGCGGGCCGCTTGGAGGAAGCATATGGTGTTGTTAAGAGTATGCCAATGGAACCCAATGTGTCTGTACTTGGTGCTC
TCTTGAATGCATGCCATCTGCATGGATGGGTAGAGTTAGGGGAGGTAGTCGGCAGGCAGCTTGTCCAATTGCAGCCAGAT
CATGATGGCAGGTACATTGGGTTGTCCAATATCTATGCTATTGCTAGGCGGTGGCAAGAGGCAAAGAAAGCAAGAAAGGT
GATGGAGGAGAGAGGAGTGAAAAAGATCCCCGGGTTTAGCGAGATTGATGTCGGTGGAAGGCTCCACAGATTTATTGCCC
ATGACAAGGCTCATTCTGGCTCAAGAGAGATATATGCGTTGCTTAATCTTATAACGGTGGAGATGAAAATGAAGGATGAT
GTTGCCATTCCAGAGTACTTCTGTACATACAGACAGGACAATGGGTGCTTAATGGATCTCT-AAAAGTAAGTTCTCCTGC
AGCATTCTGATCATGCATCCTGTCTGAATCAGGGGAAGTTCATTGTAGCTCTTGGTTCTGGTTACTTATGCAGGCTTGGT
TTGTGTTGAAAATTTGACTGCCAAACATAACCTAGTTGTGAGGAGATCCATCAAGAGCCAGATATTTGAAGAG---ATGA
AATACATTTGTGCGCTGCTACAGGAAGCAGAGCTATAGAAGAAGTATGACGTGTGCATATAGTCTTGAGATTCTTTGAGC
TGCCAGCAGAAAAGTGCATTCTGTTGCTGGACAGCAACCAGAGAGTA---AACATCTTCAGTATCTGTTTCACCTATGGC
TTCTGCTTGTATGGATGATTGATCATC----AGATAGATAAGGGCAAGAACATTCCAAAGACCGCTGACTATTTATGCCA
TATGGTGCTGAACCATGTCGTAGAGATTTCATCAATATACATTACAAGTATGCTTCACAAATTGATACACTGGCCATAGT
TTTTCTCAAGAATCTGCAGTTGTAAAAATGTACCAATTGCTAGGATCATGTGCCAGAACTGCGTATGTAGCCTGTGCTGA
GCTTTGCCCGTTAACGAGATCTCTGGTTGTGTATAGCGCTCAAAGGTGAAACCACACTGTACTTATTCCTATTTTATTTT
TT-AATCTTGGTTCCCAAAATTAGTGTTGCTTAGTTATATATTTTTATCATGCCAAACATCCGGAGCATGCTATATTTCC
TATGCGATTTGTGCTATGAATAGTGAAATTATTTTCCTGAAAGTCATATGGTACTTTACTGAAGAAACAATGTTTTGTTT
AATATAAAGTACACAAAGAGCAGTTAGCAAAATAACATGACCTGTGAATCCACCTTTTTCCCCCCACATTTTCTCC-TTT
CTTCTTGTTTTATAATAACCTCCTCTTCTCATTATCCATTTAATTATGTAAAAGTTATAACACATTGATTCTATTATTTA
TGGATATACACAGGCAAA
>SNPs
-------------------------S--------------------------------S-------------------S-
---------------------S----S-----------------------------------------------------
S------------------------------------------S------------------------------------
---------S---------S---------------------------------------S--------------------
---------S-----------------------S--------------S-------------------------------
----------S-----S-S---------------------------------------SS---S----------------
----------------------------------------------SS---------S--------------------S-
--------------------S-----S---------S------S---------SSSSSSSSSSSSSSSSSSSSSSSSS--
------------S------------S------------S--S--S-------S--------------S--------SS--
-------------------S---------S-----S-------S------S---S-------------------------
S---S-S----------------------SSS---------------S----S---S-----S--SSSSSSSSSSSSSS-
------------------------------------------------------------------------------S-
-------------------------------------------S----------------------------------S-
------------------SSSSSS--------------------------------------------------------
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------------------S-----------------------------------------------S-------------
----------------------------------------------S---------------------------------
-----------------------------------------------------------------S--------------
----------------------------------------------------S---------------------------
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----------------------------------------------------S---------------------------
--------------------------------------------S-------------S---------------------
-------------S------------------------------------------------------------------
-------------S---------------------------------S--------------------------------
---------------------------S----------------------------------------------------
-------------------------------------S--------------------------S---------------
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------------------S---S---------------------------------------------------------
----------------------------------------S---------------------------------------
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-------S---------------------------------------SSS------------------------------
----------------S----------SSSS--------------------------------S----------------
--------------------------------------------------------------------S-----------
------------------------S------------------------------------S------------------
-----------------------------------------------------------S--------------------
--S-------------------S---------------------S-----S-----------------------------
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----S-----------------------------------------------------------------------S---
----------------------------S----------------S-----------S--------S-------------
------------------
>forward_1004
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------------------------TGCAAAATAATGCCGGCTCG------------------------------------
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>reverse_1885
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--------------------------------------------GCATGGAGTCGGTGGAGATT----------------
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>forward_1039
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-----------------------------------------------------------TGCTCTCCTCCTTCCGGTTT-
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>reverse_2225
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCAATTGCAGCCAGAT
CATGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1885
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTTGCAGTGCATGGGTTGAG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CTATCAGGCCAAACATCCGGA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
