>input_sequence_50141
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--------ATGGCCTTCCTCCTCCCCAAGCTCACCACGCCGCCCTGCAGATCGCCGCCGCCCAAAA--------------
-TCGGCCTGCCGAGCCACGGCGCCGGCGGCAGGCTCCACTGCTCCGGCCCGGCGCAGGCCGCCGCGCCGGCCCACCTCAA
CCTCCCGCTCCTCCTCAGCGCCTCGCAGCAAGAGGCCCCCGCGGCCAAGTCCGCGGAGACCAGGAACCGGGCTGCGAGCG
GCGGCGGCGGCGGCGGCGGGGACCCGCGAAGGTCGGATTTTTACCTCAACCTTGGGGCGGCGGTGCGCGCGCTGCGGGAC
GACCTGCCGGCCGTGTTTCTCCGGGAGCCCAACTACGACATCTACCGGTGAGCAGGCCTTCCCTATTCCCGCGTGACTAT
TTTTGTTCCTTTTTTTCTTTCAAT----AA-TATTAGTGGTGTGTTTTGTCTGATTAGTTATCTAAAAAGCTCGTTGGTA
ATTAGTCATGGAAACATCTTACATCCAAATCGTAGCTCGGCAGTTCCAGGAATCAAAGCAGAAACTTGAACTGAAATTGT
GATGTGCAGCTAGTACCAATTTCAGTGCTCATAAAATGGCTATTCGCGCAATAATTAATAGAGCTTGCCACTCATACGAG
TTATGATTCAGAATCCTGGATGTGATAGGCATTTGTTCTGTCATCCCACCATTAGCCCTTTATTAACTGCTAATATGTTG
TATTCATGATTGGAATAGAATCAATTGATGAACTGGCTTAACAAATTTACAAGAGGTTAAGGCCACTA-GAGGGCAGTGA
CACTGACAGTCCATCATCAGCAATTGCAACAGTATGTGTTGTCCTAGTATTAATACGAATAAGTAAATAACCGAGTATGA
TTCTGGTTATGCCTGACACTGACAGGAATGCTAACTGCATATATTTCATTTCTTGCAAACTTCTATTCGTTGTAGATGCA
CTGTAGGCACACTCTTATAAAATGGAGACTATAAACATTCTTTACGTCGCATTGCAGCGAAGACATCACATTTGTTGATC
CGTTGAACACTTTCCATGGGATCGACAACTACAAAACAATCTTCTGGGCTCTCAGATTCCACGGTCGTCTACTATTCAGT
GAAATTGGGCTTGATGTGTCACGCATTTGGCAACTAACAGAAACCTCGATAGTTGTCCGGTGGGAACTGTGGGGCACACC
CCGTGTCCCGTGGGAATCATATGGCTGCTTCAGTGGCACATCCAGGTACAAAGTCGACAGGAACGGGAAAATTTACGAGC
ATAAAGTCGACAACTTGGCATTGGACTTCCCCCGGCCGGCTGTCAAAGTGGGCAGCATTACTAACTTAGTAGTTGCTGCA
TACCCACCGAGCCCCAATCCAACTTTCTGGGATGTGGTTGGCACGGGCGATGGATGCTCATGGACAAAGCTTTACCAAGC
GGTGCTGGAGACAGTAGAGCGGGAAGGTGACATTCCCGCGGGCGTTTGCATGGAAGGTCTACTCACTTGTTCATAG----
--------------------------------------------------------------------------------
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-----------
>chr2A_1_TraesCS2A01G423700
TAGAGAAGTCACAAGAATCATAAGAACCATAGTAAGGTTAATGCAAAGTTAAGATTAAGTCAATATTGTGCTACTTTGTC
TTGTTATTTGTGCATATGAATGTAAAAAGAAGGTTTGAATTGCTTTGTTTCTCTTTTGAAATTCAAACCAAAGAAAAAAA
ATCCATGTTTCTTTTGAATCAAAAAGATGAATAGTGTCCACATAGAAAAACAGTTCATATTCCAATGGTTTCTCCCTATT
GTT-----------------------------------------------------------------------------
------------------------AGGTTCTACCTAACATTCAAACAA----CCATTTTAGAGTTTTTACGTGGTTTTGA
CACCTTTTGTTGATATAAAAGGAGGT-------------------ATACGACCTCTCTAACTATACGACATCAAAACTTC
GAGCATGCACACAACCAAATTATTATTTAAAAACCGA--------------AATGATCAACGACATACAACAATGACCTT
TGGCTCCGGCCATCGCAATCGAAAGCAGCCGCATACCCTCATGAACCCTTCATCGTCTCATGGTCCAGACATGAGTAATG
TCACGCGACTAATAAC--------CATGACATTTCAATTTCATTTTTTGAG--CACACACACACACACATTTCAGTTCAG
TTCTAGCAGCGACAAG--TTCTTTTTT-AGCAAAAACAGCGACAAGTAATATGAATCGGATGACAATAC-TTTTTT----
------------------GAGTCGTTTAGT--------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGCTATGCATGTCAAACTG
GGCCTGAGCTACCAAACTTCGGGTCCAAGGCCACTTGTCTCGGAAGAAAAGCCAGATGCCGACTCAGGAAAAAAAAGATG
CCGAGTCGGAGTTTTTAACCGCATTCAGTGTAACGTCTCCGGCCGTCTCTCTCCCATCCCACGCAGGCTCGCTGCAGCCT
CTGCAGCCACTCAAAATCGCCCTGCTTTCTCGCACC--ATTTGAAGCTTCTACATGGAACACCTCAACCTAGGGCTCGCA
GCAGCAGGAGAAGAAGACAAGCCGCGGTAGCCATCGAGATCAGCCGGGAGAGAAAAATCAAGGGGCTACGA-ACGAGAGC
AGGAAGCCATGGCCTTCCTCCTCCCCAAGCTCACCACGCCGCCCTGCAGATCGCCGCCGCCCAAAA--------------
-TCGGCCTGCCGAGCCACGGCGCCGGCGGCAGGCTCCACTGCTCCGGCCCGGCGCAGGCCGCCGCGCCGGCCCACCTCAA
CCTCCCGCTCCTCCTCAGCGCCTCGCAGCAAGAGGCCCCCGCGGCCAAGTCCGCGGAGACCAGGAACCGGGCTGCGAGCG
GCGGCGGCGGCGGCGGCGGGGACCCGCGAAGGTCGGATTTTTACCTCAACCTTGGGGCGGCGGTGCGCGCGCTGCGGGAC
GACCTGCCGGCCGTGTTTCTCCGGGAGCCCAACTACGACATCTACCGGTGAGCAGGCCTTCCCTATTCCCGCGTGACTAT
TTTTGTTCCTTTTTTTCTTTCAAT----AA-TATTAGTGGTGTGTTTTGTCTGATTAGTTATCTAAAAAGCTCGTTGGTA
ATTAGTCATGGAAACATCTTACATCCAAATCGTAGCTCGGCAGTTCCAGGAATCAAAGCAGAAACTTGAACTGAAATTGT
GATGTGCAGCTAGTACCAATTTCAGTGCTCATAAAATGGCTATTCGCGCAATAATTAATAGAGCTTGCCACTCATACGAG
TTATGATTCAGAATCCTGGATGTGATAGGCATTTGTTCTGTCATCCCACCATTAGCCCTTTATTAACTGCTAATATGTTG
TATTCATGATTGGAATAGAATCAATTGATGAACTGGCTTAACAAATTTACAAGAGGTTAAGGCCACTA-GAGGGCAGTGA
CACTGACAGTCCATCATCAGCAATTGCAACAGTATGTGTTGTCCTAGTATTAATACGAATAAGTAAATAACCGAGTATGA
TTCTGGTTATGCCTGACACTGACAGGAATGCTAACTGCATATATTTCATTTCTTGCAAACTTCTATTCGTTGTAGATGCA
CTGTAGGCACACTCTTATAAAATGGAGACTATAAACATTCTTTACGTCGCATTGCAGCGAAGACATCACATTTGTTGATC
CGTTGAACACTTTCCATGGGATCGACAACTACAAAACAATCTTCTGGGCTCTCAGATTCCACGGTCGTCTACTATTCAGT
GAAATTGGGCTTGATGTGTCACGCATTTGGCAACTAACAGAAACCTCGATAGTTGTCCGGTGGGAACTGTGGGGCACACC
CCGTGTCCCGTGGGAATCATATGGCTGCTTCAGTGGCACATCCAGGTACAAAGTCGACAGGAACGGGAAAATTTACGAGC
ATAAAGTCGACAACTTGGCATTGGACTTCCCCCGGCCGGCTGTCAAAGTGGGCAGCATTACTAACTTAGTAGTTGCTGCA
TACCCACCGAGCCCCAATCCAACTTTCTGGGATGTGGTTGGCACGGGCGATGGATGCTCATGGACAAAGCTTTACCAAGC
GGTGCTGGAGACAGTAGAGCGGGAAGGTGACATTCCCGCGGGCGTTTGCATGGAAGGTCTACTCACTTGTTCATAGATGG
AATCAACTTCAGGACTAGCTGCTTCGGTAGTGAGTTTTGCTAGAAACAAATGTATAGAATGTGGGTACATATTAACCACA
TCACTGTCAGTTCTCTGTTTGTATAATGTAGCTCAGCACTAGAAAAACTTTAGATCAAATACATGGTAGATGACTATACC
TCATCATCCTTGTTGTGTATTTTAGGATATTACTGCCACTTGCTTGCATCTTATGAGATATGAATACA------------
----------------------------------AAAGTTGTAGATTTTCTCATGGGTTAGGAAAACTCTGCTCCCTAAA
TTATTTAAGAAAAATGGACGATCTCGAAGAACATTTGTGATGTAATATTCATTTTCCTTTGCAA-TTTTTTCTCTGCTTG
CTTAGGGAGCTGGGCCATTTGAATTATGAAGTATTGTTAACACCCATGAACTGTAGATAGACCCTATGTGAGATGCCATT
AACTGAGAGTTGTGTCAATCTTCTTTCTCAGAATTTATCTTGACCATGCGGAGTTCACATGGTCTGTCATAGGGCCTAGT
TAAACATTCAAAACTTTGACTACCAGTATATATTTTCAAATATTCAGACTGGAAACTTGGAGAGTCATGTGTCAATTTTC
TAGAAAAAGAAACTTGTGT--------TCAAAACAAATTGGGTTTGTAAATATTCCCTCCGTTCACAAATACAAGATGTT
CTAACTTTTTTGTGAACCGGGTTTATATACACACGTTTTAGTGTGTTTGTTCACACATTTCAGTCCGTATGTAGTCCATA
TTGAAATATCCAAAACATCTTATATTTGTGAACGGAGGGAGTATACTGTAAGAATGGTTAGTGGTAAAATTAATGTTTTG
CAAACTGTATTGATGTCCAAAACCAAAACTTTTCTAGTTGTAGGGGGCAGAAGATATGTGCGAGTTTATTGATGTTTTTC
CCCCTTCGTTTGACCTTTTATCAGCACAGCCATTTCGCCTGTCCTTCACTGCTATAACCTTCTTATAATCCTTGTGCCAT
CTCGAATGTAC
>chr2D_5
GAAA----TCACAAGAATCATAAGAACCATAGTAAGGTTGATGCAAAGCTAGGATTAAGTCAATATTGTGCTACTTTGTC
TTGTTATTTGTGCATATGAATGTAAAAAGAAGGTTTGAATTCCTTTGTTTCTCTTTTGATACTCAAACCAAAGAAAAAAA
-TCCATGTTTCTTTTGAATCAAACAAATGAATAGTGTCCACAGAGAAAAGAGCCACTAGATGGTAGGATTCTAAACAGAA
ATCCTTTGGTGCCATTTGGTGCAAAGGAATCGATGTTCTACATTTGCTTATAATATTCCCAAGGAACGAGCATTACATAT
GAATTTTGGAGAAAATCAAACATGAGGTTCTACCTAACATTCAAACAAACAACCATTTTAGAGTTTTTATGTGGTTTTGA
CACCTTTTGTTGATATAAAAGGAAGTATATTAATATCACAAGCTAATACGACCTCTCTAACTATATGTCATCAAAACTTC
GAGCACGCACACAACCAAATTATTATAAAAGAAACTCCCGAAGCGATCAACAATGATCAATGGCATGCAACAATGACCCC
TGGCTCCGACCATCGCAATCGAAAGCAGCTGCATACGCTCATGAGCCCTTTATCGTCTCATGGTCCAGACGTGAGTAATG
TCACGCCAATGATAACCATGCTTGCATGACATTTCAGTTTCATTTTTTTAGAACACACACGCGCGCACATTTCAGTTTAG
TTCTAGCAGCAACAAG--TATTTTTTTTAGCAAAAACAGCGACAAGTAATATGAATCGGATGACAATACTTTTTTT----
------------------TAGCTGTTTAGT--------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------TCCTATACATTTCAAACTG
GGCCTGAGCTACCAAACTTCGGGTCCAACGCCACCTGTCTCGGAAGAAAAGCCAGATGCCGACTCAGAAAAAAAAAGATG
CCGAGTCGGAATTTTTAACCGCATTCAGTGTAACGTCTCGGGCCGTCTCTCTCCCATCCCACACAAGCTTGCTGCAGCCT
CTGCAGCCACTCAAAATCGCCCTGCTTTCTCGCACACAATTTGAAGCTTCTACATGGAACACCTCAACCTAGGGCTCGCA
GCCGCAGGAGAAGAAGACAAGCCGCGGTAGACATCGAGATCAGCCGTGAGAGAAAAATCGAGGGGACACGATACGAGAGC
AGGAAGCCATGGCCTTCCTCCTCCCCAAGCTCACCACGCCGCCCTGCAGATCGCCGCCGCCCACTCCTCCCAAGTCCCAG
CTCGGCCTGCCAAGCCACGGAGCCGGCGGCAGGCTCCACTGCTCCGGCCCGGCGCAGGCCGCCGCGCCGACCCACCTCAA
CCTCCCGCTCCTCCTCAGCGCCTCGCAGCAAGAGGCCCCCACGGCCAAGTCCGCGGAGACCAGGAGCAGGGCTGCGACCG
C---CGGCGGCGGCGGCGGGGACCCGCGAAGGTCGGATTTTTACCTCAACCTTGGGGCGGCGGTGCGCGCGCTGCGCGAC
GACCTGCCGGCCGTGTTTCTCCGGGAGCCCAACTACGACATCTACCGGTGAGCAGGCCTTCCCTTTTCTTGTGTGACTAT
TTTTGTTCCTTTTTTTCTTTCTTTCGAGAA-TATTAATGGTGGGTTTTGTCGGATTCGGTAA------------------
------------------------CCAAATCGTAGCTCGGCAGTTCCAGGAATTAAAGCTGAAACTTGAACTGAAATTGT
GATGTGCAGCTAGTACCAATTTCAGTGCTCATAAAATGGCTATTCGTGCAAAAA-TAATAGAGCTTGCCACTCATACGAG
TTATGATTCAGAGTCCTGGATGTGATAGGCATTTGTTCTGTTATCCAA-CATTAGCCCTTTATTAACTGCTAATATGTCG
TATTCATTATTGGAATTGAATCAATTGATGAACTGGCTTAACTAATTTATAAGAGGTCAAGGCCACAA-GA-GGCAGTGA
CATTGACAGTCCATCATCAGCAATTGCGACAGTATGTGTTGTCCTAGTACTAATACAAATAAGTAAATAACCGAGTATGG
TTCTGGTTATGCTTGACACTGACAGGAATGCTAACTGCATATATTTCATTTCTTGCAAACTTCTATTCGCTGTAGATGCA
CTGTAGGCACACTCTTGTAAAATGGAGACTATAAACATTCTTTACGTCGCATTGCAGCGAAGACATCACATTTGTTGATC
CGTTGAACACTTTCCATGGGATCGACAACTACAAAACAATCTTCTGGGCTCTCAGATTCCACGGTCGTCTACTATTCAGT
GAAATTGGGCTTGATGTGTCACGCATTTGGCAACTAACAGAAACCTCGATAGTTGTCCGGTGGGAACTGTGGGGCACACC
GCGTGTCCCGTGGGAATCATATGGCTGCTTCAGTGGCACATCCAGGTACAAAGTCGACAGGAACGGGAAAATTTACGAGC
ATAAAGTCGACAACTTGGCATTGGACTTCCCCCGGCCGGCTGTCAAAGTGGGCAGCATTACTAACTTAGTAGTTGCTGCA
TACCCACCGAGCCCCAATCCTACTTTCTGGGATGTGGTTGGGACAGGCGATGGATGCTCATGGACAAAGCTTTACCGAGC
GGTGCTGGAGACAGTAGAGCGGGAAGGTGACATCCCCGCAGGCATTTGCATGGAAGGTCTACTCACTTGTTCATAGATGG
AATCAACTTCAGGACTAGCTGCTTCGGTAGTGAGTTTTGCTAGAAA-AAATGTATAGAATGTGGGTACATATTAACCACA
TCACTGTCAGTTCTCTGTTTGTATAATGTAGCTCAGCACTAGAACAACTTTAGATCAAATACATGGTAGATGACTATACC
TCATCATCCTTGTTGTGTATTTTAGGA-ATTACTGCCACTTGCTTACATCTTATGAGATATGAATACAAAAGTTGTAGAT
TTTCTCATGGGTTAGGAAAACTCTGCTCCCTACAAAAGTTGTAGATTTTCTCATGGGTTAGGAAAACTCTGCTCCCTAAA
TTATTTAAGAAAAATGGAAGATCTCAAAGAACATTTGTGATGTAATATTCATTTTCCTTTGCATTTTTAA-CGCTGCTTG
CTTAGGGAGCTGGGCCATTGAGTT---------------------ATGAACTGTAGATAGACCCTATGGGAGATGCCATT
AACTGAGAGTTGTGTCAATCTTCTTTCTCAGAATTTATCTTGACCATGCGGAGTTTACATGGTCTGTCATAGGGCCTAGT
TAAACATTCAAAACTTTGACTATCATTATATATTTTCAAATGTTCAGACTGGAAACCTGGAGAGTCATGTGTCAGTTTTC
TAGAAAAAGAACTTGCGTAG--TAGTATCAAAACAAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCCCCTGTCCTTCACCGTTATAACCTTCTTATAATCCTTGTGCCAT
GTCGAATGTAC
>chr2B_546
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------CACACACCCACGCACATTTCAGTTCAG
TTCTAGCAGCGACAAGTTTTCTTTTTA-GCAAAAGCATGCGATAAGTAATATGAATCGAATGACAATACTTTTTTTAGGG
TGATGACAATACTTTTTTGAGTTGTTTAGTTCCTATGGGCATGTTTGGTTGCCGTAGTCTACAGTAGCTGCATTGCATAG
CCTTCTCAACTCAGTCTGGCTATGCAAATGCAGCCTCAAATGCATCATCTGCAAGTTGTTTGGTTGCCTGCATGGGCTGA
ACGACACTGCCTGGTGTTTGGTTGCCTGCATGTTAGTGGACAAACCCAAGGCATGGTGTTTGGTTGTATGCAACGCATGA
TGTGTGGTAACCTGTTTGGCTAGTTGGTGAGGTTACTAGCACACTTCGGCACAACCATGTACCACACATCATAAGCAGAA
CAGAGAATAAACAGAGCATCAACTACTTAACAGCATGGTTCAGATAACATAACGATAGTACCACACATCATAACGATAGT
TCAAACAGTTCAACGCATAAACCATAAAGCAGACTCGATAGTACTTAGGAAGGAGTTGCCTCGGCCCTAGTCCCTGGCGG
CGAAGGCTTCATCATGCTTCCCGGACTTGTTGACCACCTCAATGTCATCGTCGTCGAAGATGATGACCTTGAGGGTGTCG
GGAGTCAGGAGCTTGAACATCACCATGTAGCTGATCTTGATCTGATGAATGGCGGCGTAGGTGGCCCAACCCTGATCCAG
GGTCACCCTGTCGTTTATCAGCTTCACCGTCAGCTTCCAGGAGCAGCGGGTGTTGTTCCTCAGCTTGAACTCCGTCGGCA
CCGGAACGAAGTGCTTGGTGAAGTCCACGGGCATGGGGATGCACTCAAGCTTCGATGCAAGGATGACCTTGCAGAAGTGA
GTTGGGCGACCCTCCTCATGGTAGTGGCCATAGTTGCGGCGCTTGCTGCTGGGGGGGGCTCCTCCATGCACTCTTCGTCG
CCAACTGTTGGCGTATTTGGTTCTTCCTCAGTGGTGGGCGGCAGCACCACCTTGGGCATTGGATGAACCGGCTCCTTGCC
CTTGTTGTCAACGGCCGGGAGCACCTCTGTGCCCATCTCATTGCTCTCCTCGATCTGCACACAATTCATGGAGTTAGGCA
CAACACATAGTTCATGGCTTATTGAAGAGCATATAGTTAAAACGGCATGACTGTCACTCTTCCTCCTCTCCATCGCGCCT
ATATTTACTCACCTTGTCCACCACTACTTACCCACCCACTCTCTCCATGCCTGACATGCAGAAGGAATCTGATGCAGTGC
TCATGAGGGCCACTGCACAAGAGTTGAAGACACTGATTCCTAACCCAACGAAGGGCGCGATGGCAGTCGACATCATTCGC
TGGGCCATGAATCAGGTCGTCTCCGATGACGCTAAACAAAGGAAGAGGTGGTCCAAGTACAAGAACTACTGGGCTCCTAA
TGACCGCCGTGGCGTAGTGTACTGGAGACGGCAATCCTGCCGCCGGAGGTCATCGGTGGGGGCGTCGGAGCCAGGCCGAC
TCCTCCGAGAGTGATGACGACCTGCCGGCCCGCACGTCGATGGACAAGAAGATGAAGGCCAACCACTTGACCGACCGCTT
CGCACGCCGGTGATGGCCGCCGCGGTTAGCCAGTGTCTGTTGTGTAACCCCAATTCCCTAATCCCCCTTCTACTCCATCT
GCATCTACCTCTCTTCCAATCTTGCATGAACTAGTATGAACTCGTATGAACTGCCATGCTTCTCTAACTCTATTCCCCAT
TCCCCTCTCCCCCGTGGATCGAATCTACCGCCGAATCAAACGCGAAAAAGTAGTGCATGACGAACAGAAAAGTGCTTACC
GCCATTGCCGCGGGCCAAGAGATGATCCGCTCACCAGTGATGGAGTCTGGTGGTCTTCTTGCTCTCCTCCGATCCGTCGC
CGCCGGTGAGAGTTGGGAGAGTGGGGGAGAGTGGAGAGAGGGAGCGGTGAGGGGCGGTGAGGCTCTTCGGGAAGCAACGC
GGCTTCTCAAGCATGGTCGCGTGCGTGCAGCCGCCGTCGCCCACGTGCACCGCTCGGGCCTGGCTCTGGAGAAAATGCCG
ATTCGAGCGTTTCCAGGGAGCCAGGCCCAGGAATGCTTTAAACATCGTGCCATGCAGGCCCAACAGTGTATGCAGACAAC
CAAATAAATCATTTTCTTTTCGCGCGGGCCTGGTTAGGCCTCATGCAGGCAACTAAACACGTCCTATACATTTCAAACT-
GGCCTGAACTACCAAACTTTGGGGCCAACGCCACTTGTCTCGGAAGAAAAGCCAGATGCCGACTCAGAAAAAAA--GATG
CCGACTCGGAATTTTTAACCGCATTCAGTGTAACGTCTCCGGCCGTCTCTCTCCCATCCCACACAGGCTCGCTGCAGCCT
CGGCAGCCACTCAAAATCGCCCTGCTTTCTCGCACCCAATTTGAAGCTTCTACATGGAACACCTCAACCTAGGGCCGGCA
GCCGCAGGAGAAGAAGACAAGCCGCGGTAGACATCGAGATCAGCC-GGAGAGAAAAATCGAGGGGACACGATACGAGAGC
AGGAAGCCATGGCCTTCCTCCTCCCCAAGCTCACCACGCCTCCCTGCAGATCGCCGCCGCCCAGTCCCCTCAAGCCCCAG
CTCGGCCTGCCCAGCCACGGA---GGCGGCAGGCTCCACGGGGCCGGCTCGGCGCAGGCCGCGGCGCCGACCCACCTCAA
CCTCCCGCTCCTCCTCAGCGCCTCGCAGCAAGAAGCCCCCACGGCCAAGTCCGCCGAGACCAGGAACAGGGCTGCGAGCG
GCGGCGGCGGCGGCGGCGGGGACCCGCGAAGGTCGGATTTTTACCTCAACCTTGGGGCGGCGGTGCGCGCGCTGCGGGAC
GACCTGCCGGCCGTGTTCCTCCGGGAACCCAACTACGACATCTACCGGTGAGT--GCCTTCCCTTTTCCTGTATGACTGT
TTTTGTGCCTTTTTTTTTCTTTAAATAATACTATTACTGGTGTGTTTTGTCTGATTCGTTATCTAAAAAACTCGTTGGTA
ATCAGTCATGGAAACATCTTACATCCAAATCATAGCTCCGCAGTTCCAGGAATTAAAGCTGAAACTTGAACTGAAATTGT
GATGTGCAGCTAGTACCAATTTCAGTGTTAATAAAATGGCTATTCGTGCAGAAATTAATAGAGCTTGCCACTCATACGAG
TTATGATTCAGAGTCCTGGATGTGATAGGCATTTGTTCTATTATCCCA-----------TTATTAACTGCTAATATATCG
TATTCATGATTGGAATTGAATCAATTGATGAACTGGCTTAAAAAATTTACAAGAGGTTAAGGCCACTAAGAGGGCAGTGA
CAGTGACAGTCCATCATCAGCAATTGCGACAGTATG---TGACCTAGTACTAATACAACCAAGTAAACAACCGAGTATGG
TTCGGGTTATGC------CTGACAGGAATGCTAACTGCATATATTTCATTTCTTGCAAACTTCTATTCGTTGTAGATGCA
CTCTAG-CACACTCTTGTAAAATGGAGACTATAAACATTCTTTACGTCCCATTGCAGCGAAGACATCACATTTGTTGATC
CGCTGAACACTTTCCATGGGATTGACAACTACAAAACAATCTTCTGGGCTCTCAGATTCCACGGACGTCTACTATTCAGT
GAAATTGGGCTCGACGTATCACGCATTTGGCAACTAACAGAAACCTCGATAGTTGTCCGGTGGGAACTGTGGGGCACACC
GCGTGTCCCGTGGGAATCATATGGCTGCTTCAGTGGCACATCCAGGTACAAAGTCGACAGGAACGGGAAAATTTACGAGC
ATAAAGTCGACAACCTGGCATTGGACTTCCCCCGGCCGGCTGTCAAAGTGGGCAGCATTACTAACTTAGTAGTTGCTGCA
TACCCACCGAGCCCCAATCCAACTTTCTGGGATGTAGTTGGGACAGGCGATGGATGCTCATGGACAAAGCTTTACCGAGC
GGTGCTGGAGACAGTAGAGCGGGAAGGTGACATTCCCGCAGGCATTTGCATGGAAGGTCTACTCACTTGTTCATAGATGG
AATCAACTTCAGGACTAGCTGCTTCGGTAGTGAGTTTTGCTAGAAA-AAATGTATAGAATGTGGATACATATTAATCACA
TCACTGTCAGTTCTCTGTTTGTATAATGTAGCTCAGCACTAGAACAACTTTAGATCAAATTCATGGTAGATGACTATACC
TCATCATCATTGTTGTGTATTTTAGGATATTACTGCCACTTGCTTACATCTTATGAGATATGAATACA-AAGTTGTAGAT
TTTCTCATGGGTTAGGAAAACTCTGT----------------------------------------------TCCCTAAA
TTATTTAAGAAAA-TGGAAGATCTTGAAGAACATTTGTGATGTAATATTCATTTTCCTTTGCATTTTTTTCCGCTGCTTG
CTTAGGGAGCTGGGCCATTGAGTT---------------------ATGAATTGTAGATAGACCCTATGGGAGATGCCATT
AACTGAGAGTTGTGTCAATCTTCTTTCTCAGAATTTATCTTGACCATGCGGAGTTTACATGGTCTGTCATAGGGCCTAGT
TAAACATTCAAAACTTTGACTATCATTATATATTTTCAAATATTCAGACTGGAAACCTGGAGAGTCATGCGTCAATTTTC
TAGAAAAGGAACTTGCGTAGTATAGTATCAAAACAAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCCCCTGTCCTTCACTGTTATAACCTTCTTATAATCCTTGTGCCAT
CTCGAATGTAC
>SNPs
S-S-SSSS-------------------------------S--------S--S----------------------------
-----------------------------------------S-----------------S-S------------------
S----------------------S-S----------------S------SSSSSS-SSSS-SSS-S-S--SSSSS-SSSS
S-S-----------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------S-----------------------------------------S-S------------
-----S--------------------SS--S--S-SS-----------------------S-S---S-----------SS
--------S--------------------S------S-------S-----S-------------------S---------
------S-S-S-------------------------S-----------S-----------S---S---------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
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--------------------------------------------------------------S----S---S--------
----------------------------S--------------------------------------S------------
----------S---------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--S---------------------------S----------------------------S-----SS-------------
---------------------------------------------------------------SSS--------------
-----------S--------S------------------------------------------------S----------
----------------------------------------S--------------------------S------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S----S-S--------
---------------------S--------------S-------------------S------------S----------
--S--------------------------------------------------S-----S--------------------
----------------------------------------------S----S----------------------------
------------S----------------------------S------S-----------------------------S-
----------------S---------------------------------------------------------------
--S------------------------S---------------------S------S----------------------S
------------S-------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--S-------------------------------S---
---------------------------------------S---S------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
------------------S--------------------------------------------S------S-S-------
-------------------SSSS-SSSSSSSSSSSSSSSSSSSSS-----------------------S-----------
-------------------------------------------------------S------------------------
----------------------S--S------------------------------S-----------------------
-----------SS-SSSSS------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--------------S----------------------------
-----------
>forward_605
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------CAGCCGCATACCCTCATGAA-----------------------------------
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>reverse_4717
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------AAGC
GGTGCTGGAGACAGTA----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>forward_4083
--------------------------------------------------------------------------------
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---------------------------------------------------------------CCACTAGAGGGCAGTGA
CAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>reverse_5724
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------GGGGCAGAAGATATGTGCGA-----------------
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-----------
