>input_sequence_50140
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-------------------------ATGGCACTCACCGGCGACTACAAGCTCATCAGCACCGAGGACATGCTCCAAGGCC
ACGCCGAGCTCTGCATCCACGCCTACGGCTTCGTCAAGTCCATGGCGCTCAAATGCGCCATAGAGCTCGGCATTCCCGGC
GCCATCCACGGCAACGGCGGCGGCGCCTCGCTCGGCGAGCTGGCCACCATTATCGCCCTCCCTCTCTCTAGGCTCCCGCG
CCTGCGCCGCCTCATGCGCGTGCTCACCGTATCGGGCGTCTTCTCCGTCGAGCACCAGCAGCCGGACGACTCCGTGGGCT
GCGCCGTCGCCGTCTACGGGCTCACCTCGGCCTCCCGCCTCCTCGTCGGCGACGGTGAGACATCGTCGGGACTGTCCAGC
CTCGTGTCCCTCATGGTCGACCCGAACCTCACCGCACCGTTCTCCGGCATGAGCGCGTGGTTCATGGACGACGAGCAGCC
GCGCTCTTTCTTCGAGATGCACCACGGCGAGGACATGTGGGACATGGCCGCGCGGGAAGCTGCTCTGAGCAGGACGATAG
GTGACGGCATGACCGATGACAGCCGCTTCGTCGTGGAGGTGATCCTGAGGGAGGGCCGCGCACGCGACGTCTTCTCCGGG
GTGCGCTCGATGGTCGACGTCGGCGGCGGCACCGGCACCATCGCAAAGGCCATCGCGGCAGCTTTCCCGCACGTCGAGTG
CAGCGTCCTGGATCTCCCACACGTCGTCGCGGAGGCCCCGGCCGACGGAGAGGTGCGATTCATCGCCGGCGATATGTTTG
ATCACATTCCCCCGGCCGACGCTGTTCTGCTCAAGGTAATTTCACATGTGTTCCATACTATTTTTT--------------
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--------------------------------------------TAGTCGCCATGTGTTCCATATTTCCATTGCGAGTAC
CTA-----C-------------------------------------------------TGCTGGTATTAGT---------
----------------------------ATCATTTTGTGTAGAAGTACTTTTTTTTCA-TGTTAATAGAAGCTTTATTTT
TTCTGAAGCACTAATAGAAGCTTTATAGACTCAAAAACGTCAAATATAGTCATACAAAACCATAGA----GCTTAGACCT
GGCCTTTGCATATCAGGAAGATATGCACATATGCACTTTATTACCGAGGGCACACACG-ACACTTACGTGCTTGATTAAG
TTTATAAATATTGAATGCACAAGC----CTACATGCACTTTGATTAAATATGCCACATCATATCGATATTTTCGTATTGC
AGTCAGTGATGCATGATTGGCGAGACGACGAATGCGTCAAGATACTGCGAAGGTGCAAAGAGGCAATCCCTACCAGAGAA
GCTGGAGGGAAGGTGATAATCATAAACATGGTGGTGGGTTCTGAAAAGTCTAAGGGCAATAGTACTAAAAAGGAGGAGGC
ACAAGCATTGTACGATCTCTTCCTCATGGCTTTCGAGGGAGGTGAACGAGAAGAGCACGAGTGGGAGAAGATCTTCTTGG
AAGCCGGATTCAGTGGCTACAATATCATACCCGCGCTAGGAATTAGGTCCATCATCGAGGTCTATCCTTAA---------
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----------------------------------------------------
>chr1B_1_TraesCS1B01G348200
AGGAGGTCTTTCAAAACTTACAAGGCC--AGTGCAATTTGTGCAAATCTGGTCTTTCATATTTTCTTCACTGTAAGCTTG
AACAAAAGTCGAGATGCAAAACATAAAACTAGAGGCG---ATGACTTGACTAGATTGAATTGGAGATTTTTGTTGTCCTT
GTGTGCTCTAGTACACTAATTTTATTACAATTTTTCTAATTGATTAATGAAGTTAGATCTTGATTGACGAATGAGAGTTT
GACTCGAAGAATGTAGTAACACCATAACATATAAAAATTAATGATAAGTAAAGCCAAGCC--------GAACAAATCGGC
ATATAAAATAAAAATAAAGAAAAACCCGAAGCCATCTACATTGCATATGTTTTACGATAGTGTCACCACAATCCTACGGC
AAACTTTGTGACTGCAATTCACTCGTGGAGCTACATGTCACCAAACAAAGAACGCAAGACTACAAGACAGCATCTTCAAG
GAGTCGTAGACTCCAAGACAACATCTTCAAGGAGTC-GTCCCTTGTATGCCGATGTTGACTAGTATATTCACAAAGTTAA
ACATGGGGGCTATAACCCACAAAACCGAATCTGGAGCCAACATCT-----GACGGGAAAACAACGTGCACAGTTTGATCT
AGCCAAAATGCT--------------AAATTATGGATTTTCACCCGGAGAGAATGTAACCTCGGTGTCAAGGGTCAATGC
C-------------------GCCTGCTTACACGGAGTGAAAGAACTATCTGGCCAAACGAGAATTCTTCCTTGTAAGAG-
--------------------------------------------------------------------------------
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-----------------AAGATGTCACCATGTCGCTTCCGGTCCAC----CTATGCTCAATCTTCAGTTATGTTTTATGA
GGG---------------------------------------------------------------AGGGCTAGATTTCG
TCAATCTTAAAATGCAACTGCACTTGCTCGTGATGAATATTAAAATCGGAGAAGGATTCAGTCGCATGAGTGGTGAGTGA
CTGGACAGACTATTTAGCCAGCAGTACCGGAGATATAGCTACCAACAAGTACGAAGAACAAGCTAAGATCAACCACCCT-
-------GCACGTAGTAAGTACTCCATGGCACTCACCGGCGACTACAAGCTCATCAGCACCGAGGACATGCTCCAAGGCC
ACGCCGAGCTCTGCATCCACGCCTACGGCTTCGTCAAGTCCATGGCGCTCAAATGCGCCATAGAGCTCGGCATTCCCGGC
GCCATCCACGGCAACGGCGGCGGCGCCTCGCTCGGCGAGCTGGCCACCATTATCGCCCTCCCTCTCTCTAGGCTCCCGCG
CCTGCGCCGCCTCATGCGCGTGCTCACCGTATCGGGCGTCTTCTCCGTCGAGCACCAGCAGCCGGACGACTCCGTGGGCT
GCGCCGTCGCCGTCTACGGGCTCACCTCGGCCTCCCGCCTCCTCGTCGGCGACGGTGAGACATCGTCGGGACTGTCCAGC
CTCGTGTCCCTCATGGTCGACCCGAACCTCACCGCACCGTTCTCCGGCATGAGCGCGTGGTTCATGGACGACGAGCAGCC
GCGCTCTTTCTTCGAGATGCACCACGGCGAGGACATGTGGGACATGGCCGCGCGGGAAGCTGCTCTGAGCAGGACGATAG
GTGACGGCATGACCGATGACAGCCGCTTCGTCGTGGAGGTGATCCTGAGGGAGGGCCGCGCACGCGACGTCTTCTCCGGG
GTGCGCTCGATGGTCGACGTCGGCGGCGGCACCGGCACCATCGCAAAGGCCATCGCGGCAGCTTTCCCGCACGTCGAGTG
CAGCGTCCTGGATCTCCCACACGTCGTCGCGGAGGCCCCGGCCGACGGAGAGGTGCGATTCATCGCCGGCGATATGTTTG
ATCACATTCCCCCGGCCGACGCTGTTCTGCTCAAGGTAATTTCACATGTGTTCCATACTATTTTTT--------------
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--------------------------------------------TAGTCGCCATGTGTTCCATATTTCCATTGCGAGTAC
CTA-----C-------------------------------------------------TGCTGGTATTAGT---------
----------------------------ATCATTTTGTGTAGAAGTACTTTTTTTTCA-TGTTAATAGAAGCTTTATTTT
TTCTGAAGCACTAATAGAAGCTTTATAGACTCAAAAACGTCAAATATAGTCATACAAAACCATAGA----GCTTAGACCT
GGCCTTTGCATATCAGGAAGATATGCACATATGCACTTTATTACCGAGGGCACACACG-ACACTTACGTGCTTGATTAAG
TTTATAAATATTGAATGCACAAGC----CTACATGCACTTTGATTAAATATGCCACATCATATCGATATTTTCGTATTGC
AGTCAGTGATGCATGATTGGCGAGACGACGAATGCGTCAAGATACTGCGAAGGTGCAAAGAGGCAATCCCTACCAGAGAA
GCTGGAGGGAAGGTGATAATCATAAACATGGTGGTGGGTTCTGAAAAGTCTAAGGGCAATAGTACTAAAAAGGAGGAGGC
ACAAGCATTGTACGATCTCTTCCTCATGGCTTTCGAGGGAGGTGAACGAGAAGAGCACGAGTGGGAGAAGATCTTCTTGG
AAGCCGGATTCAGTGGCTACAATATCATACCCGCGCTAGGAATTAGGTCCATCATCGAGGTCTATCCTTAACTAAACACC
AAACTTGCTATGCAACCTTGGTAAATAATGTTCAAGCTTTGTAAGCTAATTATTGCCTATATTAATATATGGTTTATATA
TATATGTGCACCTCGTGTGCGCCCTACTTGTCCTTCAAGTTTGTGCGGGTTTAATTTGCTCAAATTAGCCGGTT-TCATG
TTTCGGTCAGAGATGAATATACTCATTTATGTATCTTGGAGTGTATGCATGTTACTCCAAATTCTTTTTCATCAATGTAA
TATAGATGTGTTGATAATATTTTGATGACCCCCCTATATATTAAG---------TATTTGTAGATTTTTGTTGCCATGAA
TTGACACACATGACAAATGCAATATCATTGAGATTCAACATATCAATGCAAGGCAACATATATGTTGGAAATATAAAAAG
AAATC-TATGTAACTATTCTTGATTGATTTCTTAGTTACATCGTTGAATTCTCTGTGGTCTTGCCTTCATCGACCTCTGA
AGTAACCGGGATGCCTAGACTAGTGGACAAGAAACTACTAAGACACAAATAGGCACACGAGAAGAAAACG---TCCGAAT
AAAGAGCTAGGTTTCAAGCTTGTACCCAATTTGAGATGGTCGTTTCAATTGCTTCTCGAGACGAGTTAGATAGATCTCTT
GGTAATTTCAATGATCACAGTGGATGAAAGGAAGCACACTTTCGTGAAAGATGTTTACCATATGTATAATTGATTTCCTT
TGTACATGGTCACTAAAATATAAGGTTACAAAGTGGGAAAATATGATAAGAAGAAACCAAACTTATCATTG-AAGGCTTA
A-TTATCTAAAGCTCAAGTTGAGTTGTCATTTTCATCATTGGTCATGACTATGTAATAACGACTTATTCCGACAGAATGA
ACCCACATGACATTAATAAGAACTAAATAAGTAATCAAGCATTGTGTCTTCTCGTTGAGATGCATGAAAGAGACATG---
--TAACATTCAAGATGCTCATGTATAATATATATTAATGTTGTATGTAACTA
>chr1D_2
-GGAGGTCTTTCAAAACTTACAAGAGGCTAGTGCAATTTGTGCAAATGCGGTCTTTCATAGTTTCTTCATTGTAAGCTTG
AACAAAAGTCGAGATGCAAAAGATAAAACTAGAGCCAATAATGACTTGACTTGATTGAACTGGAGATTTTTGTTGTCCTT
CTGTGCTCTAGTATACTCATTTTATTACAATTTTTCTAATTGATGAATGAAGTTAGATCTTGATTGGCGAATGAGAACTT
GACTCGAAGTATGTAGGAACATCATAACATATAAAAATTAATGATAAGTAAAGCCAAGGATCAAAACAGAACAAATCGAC
ATATAAAATAAAAATAAAGAAAAACCTGAGGCCATCTGCATTGCACATGTTTTGCGATAGTATCACCACAATCCTTCCGC
AAACTTTATGATGT-AATTCACCCATGAAGCGACATGTGACCTAACAAAGGACGCA------------------------
-------AGACTCCAAGAGAACATCTTCGAGAAGGAAGTCCCTCGTATGCTGATGTTGACTAGTACATTCACAAAGTCAG
ACCT-AGGGCTATTGCCCA-AAAGCCGAACTTGGAGCCAACATCGGACAGGACGGGAAAACAACGTGCACCGTCTGATCT
CTTCCTCATGGTTTTCGAGGGAGGTGAAATTATGGATTTTCACCCGGAGAGAATGTAACCTCGGTGTCAATGGTCAATGC
CACCATCCACCTCTCTACCAGCCTGCTTACATGGAGTGAAAGAACTATCTGGCCAAACGAGAATTCTTCTTCATAAGAG-
--------------------------------------------------------------------------------
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-----------------AAGATGTCACCATGTCGCTTCCGGTCCAC----CTATGTTCAATCTTCAGTAATATTCTATGA
GGG---------------------------------------------------------------AGGGCTAGATTTCG
TCAATCTTAAAATGCAACTGCACTTTCTCGTGATGAATATTAAAATCGGAGCAAGATTCAGTT-CATGAGTGGTGACTGG
-----CAGACTATTTAGCGAGCAGTACCGGCCGGAGATCTACCAACAAGTACGAAGAACGAGCTAAGAACAACCACCCT-
-------GCACGT----AGCACTCCATGGCGCTCACCGGCGATTACAAGCTCATCAGCACCGACGACATGCTCCAAGGCC
ACGCCGAGCTCTGCATCCACGCCTACGGCTTCGTCAAGTCCATGGCGCTCAAATGCGCCATAGAGCTCGGCATTCCCGGC
GCCATCCACGGCCACGGCGGCGGCGCCACGCTCGGCGAGCTGGCCACTATTATCGCGCTCCCTCCCTCCAGGCTCCCGCG
CCTGCGCCGTCTCATGCGCGTGCTCACCGTCTCGGGCGTCTTCTCCGTCCAAAACCAGCAGCCGGACGACCCCGCGGGCT
GCGCCGCCGTCGTCTACGGGCTCACTGCAGCCTCCCGCCTCCTTGTCGGCGACGGCGAAGCATCGTCGGGGCTGCCCCGC
CTCGTGTCCCTCATGGTCGACCCGAACCTCACCGCGCCGTTCTCCGGCATGAGCGCGTGGTTCATGGACGACGAGCAGCC
GCGCTCCTTCTTCGAGATGCACCACGGCGAGGACATGTGGGAAATGGCCGCGCGGGACGCCGCCCTGAGCAGGACGATAG
GCGACGGCATGACCGACGACAGCCGCTTCGTCGTGGAGGTGCTCCTGAGGGAGGGCCGCGCGCGTGACGTCTTCTCCGGG
GTGCGCTCGATGGTCGACGTCGGCGGCGGCACCGGCACCATCGCAAAGGCCATCGCGGCAGCGTTCCCGCACGTCGAGTG
CAGCGTCCTGGATCTCCCACACGTCGTCGCGGAGGCCCCCGCCGACGGAGAGGTGCGGTTCATCGCGGGCGATATGTTCG
AGCACATTCCCCCGGCCGACGCTGTTCTGCTCAAGGTAATTTCACATGTGTTCCATACTTTTTTTTACTAACTAAGTCTT
TTAAAAGATTTCAATATGGATTATATACGAAGCAAAGTGAGTGAATCTACACTCTAAAAATATGTCGATATGCATAGATT
GTATTGAAATATCTAAAAGGAAAACGTTTCCACCCGGCGGACCGGTCGAAGTTTGGGTCGGTCACGCGCGGGCCTTGCGA
TAGCAAAGCGATTCGTGGCTACGATTAGTCCCCGCCCAGTCGACATTATCCTCTCGCGGGGGTCGTCTTCTCCGCGCACG
GCGGCCAGGGCAACAACGAGGGTTGCGCAGGGGGTGACGCTAGGGATTAGCGACGGGATGGGCGCGTGCTGGGCCACCCG
CAACAGCGCGGCGGTGGTGCTGCGTATGGCCACAATAGATGCGGCGGGGACATCGCCAAGATGCTGGACCTGGACGATGG
GGGAATGGCGGCGGCTGTAGATGCTTCAACCACGGGGCGGCAAGTTGCAACGATGAGAAACGGTGCTACGACGACGATGG
TTGCGACGAGGTGCTGCAACCGCGGCGATGGTGGCGACGAGGTCACCAGAACAGAAGACAGCCGATGCTGGAACCAGTCA
CAACAAGTGTTACAACCAGCATGATGTTTTGCTACGGTCTGACACAGCATGACCCCGGCGGCCTCAGGCGGCAATGTGGT
TTTCGCTGGAAACGGTTACACCAGATGCTTCAACCGGCACGGCGATTGCTGTGACCGGTCACATCTCCCGACGGCCATGG
CCGGCGATGTGGGTTGGCAAGGCTTTTGTGCTACAACCAACACCGGCAGATGCTACAACCGGCATGGGTTTTCGCTGCAC
CAGTCACTGCATCGCGCCCGGCGACGATGGCGGCGATGTTCGTTTTGCTGCAACCAGCTTTTCAGATGCTACAACCATAC
ATGGCAGTGTTGGAACTGTGTATTTGCGTGGGTTACGACCTTTTTCAATGGCGGCCATGACGGCGACTAGGTGCTGCAAC
CAGGCAATCCATTTTTGTTGGAACCGACCATGGGAGCTGCTACAACCGGAGACGACCGCGGTTGCCATGGCCATGGTAAT
TTATTGGGGGTGCTACAACCGGCCAACTAATTTGCTGGAACCAGCAATGGCTGTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGTCTGTTGCCGACGA
CGAGCCAAGTGGCGGCGATTTTTGGTGATACGATGATGGAAGCTACATCCAGGGGAGGCTGTGATGGGGGCATACAGCAC
ACGACGAGCGGTGGCGGCAGATAGCGAGTGCGAGATGCCTTGCTGCAAGTCGAGGGGGTGGGGCGGTGGCGGCGGCGGTG
GCGCTGTAGCGTTTCGCTCGGTGAAGAAAAAAGGAGAGAGCGAGCGTGGGGGAGACGACGATGCAGTTTTTTTCAGGTAC
CAGATCCAACGAACAAAAGTTGTTGCATCGAAGGGCTAGGAGGCGACCGGCCGAAACTTTCGGCCGGTGCGCCAGCGCCT
AACAGTCGCCTATCTAAAAAGACTTATATTTAAGAACGGGGGAGTAGTCCGCATGTGTTCCATACTTGCATTGCAAGTTA
GTACCTAGC-------------------------------------------------TACTGGTATTAGTCAT------
--------------------------TAATCATTTTGCGTAGAAGTACTTTTTTTTTCTTGTTAATAGAAGCTTTATTTT
TCTTGAGGCACTAATAGAGGCTTTATTGACTGAAAAACGTCAAATATGGTCATACAAACTCATAGA----GCTTAGACCT
GACCTTTGCATACCAGGATGACATGCACATATGCACTTTATTACCGAGGGCACACGTG-ACACTTACGTGCTTGATTAAG
TTG--AAATATTGAATGCACAAGCCTAGCTACATTCACTTTGATTAAATATGCCACATCATATCGATATTTTCATATTGC
AGTCAGTGATGCACGATTGGCGAGACGACGAGTGCGTCAAGATACTGCGAAGGTGCAAAGAGGCAATCCCTTCCAGAGAA
GCCGGAGGGAAGGTGATAATCATAAACATGGTGGTTGGTTCTGAAAAGTCGAAGGGCAATAGTACTAAAAAGGAGGAGGC
ACAAGCATTGTACGATCTCTTCCTCATGGTTTTCGAGGGAGGTGAACGAGAAGAGCACGAGTGGGAGAAGATCTTCTTGG
AAGCTGGATTCAGTGGCTACAATATCATACCTGTGCTAGGAATTAGGTCCATAATCGAGGTCTATCCTTAACTAAACACC
ATATTTGCTATGCAGTCTTGGTAAATAATGTTCAAGCTTTGTAAGCTAATTATTGGCTATATTAATTTATGGTTTATATA
TGTATGTGCACCGCATGTACGCCTTACTTGTCCTTCAAGTTTGTACGGGTTTAATTAGCTCAAATTAGCCGGTTTTCATG
TTTGGGTCGGAGATGAATGCACTCATTTATGTATCTTGGAGCGTATGCATGTTACTCCAAATTGTTTTTCATCAGTGTAA
TATAGATGTGTTGATAATATTATGATGACCCCCTTATATATTAATTATTCATGGTATTTATCAGTTTTTGCTGCCACGAA
TTGACACACATGACGAAGGCAATATCATTGAGATTTAACATATCAATGCAAGGCAACATATATGTTGGGAATATAAAAAT
AAATCTTATGTAACTATTCTTGATTGCTTTCTTAGTTACTTCGTTGAATTCTATGTGGTCTCGCCTTCATCGATCTTTGA
TGTGATCGGGATGCCTGGACTAGTGGACAAGAAACTGCTAAGACACAAACAGGCACACGAGAACAAGATGCAATCCGAAT
AAAGAGCTAGATTTCAAGCTTGTACCCAATTTGAGATGGTCGTTTCAATTGCTTCTCCATAAGAGTTAGAAAGATCTCTT
GGTAACTTCAATGACTGCGGTCGATGAATGGAACCAAACTTTCGTAAAAGATGTTTACCATATGTATCATCGATTTCTTT
TGTACATTGTCACTGCA--ATAAGGTTACGAAGTGGGAAAATATGATAAGAAGAAACCAAAC-TTTCATTGCAAGGCTTA
A-TTATCTAAAGCTCAAGTTGAGTTTTCATTTTCATCACTGGCCACGACTATGTAATAACGACATATCCCGACAGAATGG
ATCCACATGACATTAATAAGAACTAAATAGGTAATCAAGCATCATGTCTTCTAGTTGAGATGCATGAAAGGGACATA---
--TAACATTCAAGATGCTCATGTATAATATATATTAATGTTGTATGTAAC--
>chr1A_523
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--------------------------------------------------------TGACAAGAACATTCACAAAGTCAA
ACCC-GGGGCTATCATCCACAAAGCCGAACTTGGAGCCAACATCT-----GACGGGAAAACAACATGCACAATCT--TCT
AGCCACAGAGCT--------------AGATTATGGATTTTCACCCGAAGAGAATGTAACCTTGGTGTCAACCGTCAATGC
TGCCATCCACCGCTCTACCAGCCTGCTTACACAGAGTGAAAGAACTATCTGGCCAAATGATAATTCTTGAGGAGAGAAGA
TTGTTGAAATATATTGCCCGCTTTTCTCCATCAGTTCGGACTTTTGGATGAGTTGGCTGGAGCATATTTAATATGATATC
CGAGCCAGGAGGTGAAGACCCTGCCAATGCAGTATTAAAAAATGATTATGTGGCCTAAATAAATCTCAAGTCTAAGGGCT
AAATAAGTCTAGATGCGAGAAAGAGTGTTGAAATATATTACCCATCTTTCTCCATCAGTTCGGACTTTTGAATGAGTTAG
CTGGAGCATGTTCAATAAAGATGTCACCATGTCACTCCTACCACACCACGCTACGTTCAATCTTCAATTATGTTTTACTT
TCCCCATTTTTAAATATAAGTCTTATTTTAGAGATTTCAATGCGGTACACGGAGGGAGTATGACGAAGGGCTAAATTTCG
TCAATCTTAAAATGTAACTGCACTTTCTCGTGATGAATATTAAAATCGGAGAAGGATTCAGCTGCATGAGTGGTGAGTGA
CTCGAGAGACTATTTAGCGAGCAGTACCGGAGATCTAGCTACCAACAAGTACGAAAAACAAGCTAAGAACAACCACCCTG
CAGGGCGGCACGT----AGTACTCCATGGCGCTCACCGGCGACTACAAGCTCATCAGCACCGAGGACATGCTCCAAGGCC
ACGCCGAGCTCTGCATCCACGCCTACGGCTTCGTCAAGTCCATGGCGCTCAAATGCGCCATAGAGCTCGGCATTCCCGGC
GCCATCCACGGCAACGGCGGCGGCGCCACGCTCGGCGAGCTGGCCACCATTATCGCCCTCCCTCCCTCCAGGCTCCCGCG
CCTGCGCCGCCTCATGCGCGTGCTCACCGTCTCGGGCGTCTTCTCCGTCCAACACCAGCAGCCGGACGACTCCGCGGGCT
GCGCCATCGTCGTCTACGGGCTCACCTCAGCCTCCCGCCTCCTCGCCGGCGACGGTGAGGCGTCGTCCGGACTGTCCCGT
CTAGTGTCCCTCATGGTCGACCCGAAACTCACCGCGCCGTTCTCCGGCATGAGCGCGTGGTTCATGGACGACGAGCAGCC
GCGCTCCTTCTTCGAGATGCACCACGGCGAGGACATGTGGGATATGGCCGCGCGGGAGGCTGCTCTGAGCAGGACGATAG
GCGACGGCATGACCGACGACAGCCGCTTCGTCGTGGAGGTGCTCCTGAGGGAGGGCCGCGCGCGCGACGTCTTCTCCGGG
GTGCGCTCGATGGTCGACGTCGGCGGCGGCACCGGCACCATCGCAAAGGCCATCGCGGCAGCTTTCCCGCACGTTGAGTG
CAGCGTCCTGGATCTCCCACACGTCGTCGCGGAGGCCCCCGCCGGCGGAGAGGTGCGATTCATCGAGGGCGATATGTTCG
AGCACATTCCCCCGGCCGACGCTGTTCTGCTCAAGGTAATTTCACATGTGTTCCATACTTTTTTTT--------------
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--------------------------------------------TAGTCCGCATGTGTTCCATACTTGCATTGTGAGTCA
GTACCTAGTTTTGAGGCCGGTGTTATTTTGTTGTACCGTGTTTTTTTTCCTTGAGCTATACTGGTATTAGTCATAATAAT
CATTTTTCCTGCAAAAAAGGTCATAATAATCATTTTGTGTAGAGGTACTTTTTT--CA-TGTTAATAGGAGCTTTATTTT
--TTGAGGCACTAATAGAAGCTTTATTGACTCAAAAACGTCAAATATGGTCATACAAACCCATAGATCGAGCTTAGACAT
GCCCTTTGCATATGAGGATGACATGCACATATACACTATATTATCGAGGGTACACGCAAACACTTAAATGCTTGATTAAG
TTG--AAATATTGAACGCACAAGC----CTACATGCACTTTGATTAAATATCCTACATCATATTGATATTTTCGTATTGT
AGTCAGTGATGCACGATTGGCGTGACGACGAGTGCGTCAAGATACTACGAAGGTGCAAAGAGGCAATCCCTTCCAGAGAA
GCTGGAGGGAAGGTGATAATCATAAACATGGTGGTTGGTTCTGAAAAGTCGAAGGGTAATAGTACTAAAAAGGAGGAGGC
ACAAGCATTGTACGATCTCTTCCTCATGGTTTTTGAGGGAGGTGAACGAGAAGAGCATGAGTGGGAGAAGATCTTCTTGG
AAGCCGGATTCAGTGGCTACAGTATCATACCTATGCTAGGAATTAGGTCCATCATCGAGGTCTATCCTTAACTAAACAAC
AAACTTGCTATGCAACCTTGGTAAATAATGTTCAAACTTCGTAAGCTAATTATTGCCTGTATTAATTTATGCTTTATATA
TGTATGTGCACAGCATGTACGCCCTGCTTGTCCTTCAAGTTTGTGCGGGTTTAATTTGCTCAAATTAGCTGGCTTTCATG
TTTGGGTCAGAGATGAATGTAGTCATTTATGTATCTTGGAGTGTATGCAAGTTACTCCAAATTGTTTTTCATGGGTGTAA
TAAAGATGTGTTGATAATATTATGATGACCCCCTTACATGTTAACTGTTCACGATATTTATTGGTTTTTGCTGCCATGAA
TTGACACACATGAGAAAGGCAATATCATTGAGATTCAACATAGCAATGCAAGGCATCATATATGTTGGAAATATAAAAAC
AAATCTTATGTAACTATTCTTTATTGCTTTCTTAGTTACGTCGATGAATTCTCTGTGGTCTCGCCTTCATCGACCTCTAA
AGTGACCGTGATGCCTGGACTAGTGGACAAGAAACTGCTAAGACACAAACAAGCACACGATACAAAAATGCAATTCGAAT
AAAAAGCTAGATTTCAAGCTTATACCCAATTTGAGATGGTCGTTTACATTGCTTCTCCAGAAGAGTTAGAAAGATATCTT
GGTAACTTCAATGATTGCGGTGGATGAATGGAACCACACTTTCTTATAATATGTTTACCATATGTATCATCAATTTGTTT
TGTACATTGTCACTAAAATATAAGGTTAAAATGTGGAAAAATATGATGAGAAGAAACCAAACATATCATTGCTAGGCTTA
AGTTATCTAAGGCTCAAGTTGAGTTGTCATTTTCATCATTGGTCATGACTATGTAATAATCACATAGTCCGACAGAATGA
ATCCACATGACATTAATAAGAACTAAATAAGTAATCAAGCATTATGTCTTCTAGTTGAGATGCATGAAAGGGACATACCG
TATAACATTCAAGATGCCCATGTATAATATGTACTAATGTTGTACGTAA---
>SNPs
S-----------------------SSS--------------------SS-----------S--------S----------
---------------------S------------S-S--------------S-------S--------------------
S------------S---S--------------------------S---------------------S---------SS--
---------S------S----S------------------------------------SS------------------S-
--------------------------S--S-------S-------S-------S-------S-------------S-S--
-------S---SSSS-------S-S--S---S------S---S-------S-----SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-----------S---------S--S--SS-------S------S--------------S-----------S--
--S-S--------S---------S-----SS------------------------------------------S------
-----S----------------------------------------------------------------S---------
---------------------------------------------------------------------S-SS-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------S-----------------
--S---------------S-------------------------------------------------S-----------
-------------SSSS-------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------------------------------------S---S-----------
------------------------------S------------------S-S----------------------S-----
---------S------------------S------------------------------S-----------------S--
-----------------------------------S--------------------------------------------
------S-----------------------------------S--------------S----------------------
-S--------------S------------------------S-------------------S------------------
--------------------------------------------------------------------------------
---------------------------------------S--------------------------S-----------S-
-S---------------------------------------------------------S--------------------
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-------------------------------------------------SS-------------S--S----------SS
S----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-SS---S-------------------S--------------------S----------S---------------------
-S----------------S--S---------------------------------S------------------------
--SSS---------------------------------------------------------------------------
-------------S-----------------S---------------------------------------S--------
-----------------------------------S--------------S-----------------------------
-----------------------------S--------------------------------------------------
-------------------------------S-S----------------------------------------------
------------------------------------------------------------------S-------------
-S----------S-S---S-------------------------------------------------------------
---S--------------S--------------------------------------------S----------S-----
---------------------S-----------S----------S--------------S-S-S------S---------
-----------------S-------------------------------------------------------------S
--------------------------S------------S---------------------S------------------
---S------------S-------------------S------------S-------------S----S-----------
----------S----------------------------------------------S---S--------S---------
-----S---------SS-S---------S----S-----------S---------------------S--S------S--
-------S------------------------------------------------------S-----------------
---------------------------------------------------------------S----------------
-S-----------------------------------------S--------S-----------------S-----S---
--------------------------------------------------SS
>forward_432
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------------TGCAATTCACTCGTGGAGCT------------------------------------------------
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>reverse_4414
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-------------TGATTGGCGAGACGACGAAT-----------------------------------------------
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----------------------------------------------------
>forward_1375
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---------------------------------------------------------------------------ATCAA
CCACCCTGCACGTAG-----------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_4819
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GCGCCCTACTTGTCCTTCAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
