>input_sequence_50121
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--------------------ATGCACGCCAACCACCCGCGCACCCTCGCCGCCAACCTCGGCGGCTTCGCCCGCTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACCAGGACGACGTCGC
CGCGGCCGCC---ATCCAGTACCGCCGCGGCGGGCCCGGGGGCAAGGGCGGCAAGCGGCGCTGCGTCGG-----------
-CGGCGGCAGGGCCGCGGCCGCGGAGACCGCCAAGGCCCGGCGCGAGAAGGAGGCAGAGCACGCGCAGGCCGTGCTCGCC
CGCTACGACTCCGACGAGGCCTTCCGCAAGCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGCTGCTCAAGTCGGACCT
GGAGCACCTGCGCGCGGGCGAGACGGCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTCCGCTCGTCGTACGACC
GCGCGACGCTGCTCTGCGAGGCGATCGCGCGCCGCGTCTTCCCGCGCGACTCGAGCCCCGAGTACCTCGCCATCCCCGAC
AAGCACTACGCCTACCGCGTCCGCAGCCGCCTCCGCCGCGAGGTGCAGGTGCCGCTGCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGCGCCCGCAAGTGGGACGAGCTGCCCTA--CGCGCGCGTCGCGTCCACGGCCATGCGCCAGTACAAGGA
GGCGTTCGAGAAGCACGACAAGGAGGGCGTGGCCGGCTTCTACGACGAGGTGCGCGCCGGGCTGTCCAAGATCCCCGCCG
ACGCGGTGCTGCCGCACGTGATCGTCGCCGCGGCGCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCAC
ATGGTGTCGTCCCTCGCCTCGGAGGGCCGCCTCACCAACTGCATCGCCATGTGCGCGCTCTCGG---GCACGTCGGACAA
GCCGCCCGCGGCGGCCGCCATCGCGCTGGGGCTGCTCATCTCGGAGCTGAGCCAGGACCCCTGGAAGGGGCGCGTCATCA
CCTTCGACGCCACCCACCAGCTGCACAAGGTGCGCGGCGCGTCGCTGGTGGAGAAGCTCCGGCCGCTGGCCGCCGTGACC
CCGCAGCGCGGCGCCAACCTGCAGGCGGTGTTCAACAAGATCCTGAAGGTGGCGGTGGCGGGCGAGCTGGCCAAGGACCA
GATGGTGCGGCGCGTCTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGACGGGCGGCGAGGCGTGGGTGTCGGAGCACG
AGGCCATCCGCAAGCGGTTCGCGGCCGAGGGCTTTGCGGCGCCGGAGGTGGTGTTCTGGAACGTGGGAGGCACGTCCAAG
GCGG---CGTCGCCGGTGGTGGCCGCGCAGGCGGGCGTGGCGCTGGTGAGCGGCTACTCGAAGAACCTGGTGCGCCTCTT
CCTGGAGGCCGACGGCGTGCTCACCCCCTCGGCCATCATGGCCGACGCCATCTCCGGCCCCGAGTACGACGCCCTCGAGG
TGCTCGACTGA---------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G541900
CTTACCTTCTCAGCTGGAAATACAACTCACCCTGCACACCCCATGGTTCTTATACAAGGACTACACACCCCAAGGAATAA
GGGGAGCTATGACAATGAAGAATGATGGACATGTGTAGGATGGTGGCGATCGAAGTATATGAAATGACGATAAAGAGGCA
TGGTGTCACGCCATGTTAAAAACACACACCCTTCTGTCGGATTTCGAAAAACTTGGAAAATAATAATTGACCGCTACAAG
TGTTCATTTATTTATTTTGCAAAACATTCATTTAGGGGCATGGCAACGGAATAATTAAGCAGGGGTTATTTGTGTGCTCA
AACATGTTATTATTATTAGGAATACAAAAGATGAGGAAAACTTGGAAAATAGTAATTTTAAGTCGGTTGGGCCG------
----CAAAGGATCCGCCCGGGACCTCCTATGTCGGTTGCAACGGACGCGCCACGCCATATAAGCGATCGCTCCGTCC-AC
CCAACCCATCATCGTCTCCTCCAATCCAATCCCCCATCTCGATCCCCACCGATCGGATCTCCAAACCCTAGCCAGCAAGC
TAAA-------------CCCATGGCTCCTCCCGGCGCCGCGCTCCTCGGCCCGCCGCAGGCCATCGTCGACACCGAGATG
------GCCGACCGCAAGCCCGCCGCCAAGAAGCCGACGCCGACCAAGCAGGCCAAGCCGAAGCGCGCGCCCCGCGGGTA
CTCCTCCGACTC---------CTCGACATCATCGGACGGCTACAGCGACTCGGACGACGACGAGCCCCAGCGCAAGCCCA
CGG------------------C---CCATGCCCCTGCGGCGACGGGACGCGCGCTGGCGTACGCGTCGTCGGGCGACCCC
TGCGTCGACTTCTTCTTCCAGGTCGTCCCCGGCGCGACCGCGGCCGCCGACGTGGCCGCGCTGCTCGGCGTCGCGTGGGC
CGCCGACGCGCGCACGGCGCTGCGGCTCGTCTGCCACCTCCGCGGCGTCCGCGGCCTCGGCAAGGCCGACCGCGAGGGCT
TCTACGCCGCCGCGCTCTGGATGCACGCCAACCACCCGCGCACCCTCGCCGCCAACCTCGGCGGCTTCGCCCGCTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACCAGGACGACGTCGC
CGCGGCCGCC---ATCCAGTACCGCCGCGGCGGGCCCGGGGGCAAGGGCGGCAAGCGGCGCTGCGTCGG-----------
-CGGCGGCAGGGCCGCGGCCGCGGAGACCGCCAAGGCCCGGCGCGAGAAGGAGGCAGAGCACGCGCAGGCCGTGCTCGCC
CGCTACGACTCCGACGAGGCCTTCCGCAAGCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGCTGCTCAAGTCGGACCT
GGAGCACCTGCGCGCGGGCGAGACGGCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTCCGCTCGTCGTACGACC
GCGCGACGCTGCTCTGCGAGGCGATCGCGCGCCGCGTCTTCCCGCGCGACTCGAGCCCCGAGTACCTCGCCATCCCCGAC
AAGCACTACGCCTACCGCGTCCGCAGCCGCCTCCGCCGCGAGGTGCAGGTGCCGCTGCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGCGCCCGCAAGTGGGACGAGCTGCCCTA--CGCGCGCGTCGCGTCCACGGCCATGCGCCAGTACAAGGA
GGCGTTCGAGAAGCACGACAAGGAGGGCGTGGCCGGCTTCTACGACGAGGTGCGCGCCGGGCTGTCCAAGATCCCCGCCG
ACGCGGTGCTGCCGCACGTGATCGTCGCCGCGGCGCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCAC
ATGGTGTCGTCCCTCGCCTCGGAGGGCCGCCTCACCAACTGCATCGCCATGTGCGCGCTCTCGG---GCACGTCGGACAA
GCCGCCCGCGGCGGCCGCCATCGCGCTGGGGCTGCTCATCTCGGAGCTGAGCCAGGACCCCTGGAAGGGGCGCGTCATCA
CCTTCGACGCCACCCACCAGCTGCACAAGGTGCGCGGCGCGTCGCTGGTGGAGAAGCTCCGGCCGCTGGCCGCCGTGACC
CCGCAGCGCGGCGCCAACCTGCAGGCGGTGTTCAACAAGATCCTGAAGGTGGCGGTGGCGGGCGAGCTGGCCAAGGACCA
GATGGTGCGGCGCGTCTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGACGGGCGGCGAGGCGTGGGTGTCGGAGCACG
AGGCCATCCGCAAGCGGTTCGCGGCCGAGGGCTTTGCGGCGCCGGAGGTGGTGTTCTGGAACGTGGGAGGCACGTCCAAG
GCGG---CGTCGCCGGTGGTGGCCGCGCAGGCGGGCGTGGCGCTGGTGAGCGGCTACTCGAAGAACCTGGTGCGCCTCTT
CCTGGAGGCCGACGGCGTGCTCACCCCCTCGGCCATCATGGCCGACGCCATCTCCGGCCCCGAGTACGACGCCCTCGAGG
TGCTCGACTGAGTGCACGTCG-------------------------CAGCCATGATCGTCAGTCCGTCCATCCATCGA--
--TTTAGTTAGCTTTTTCGTCCCGTCCATCGATTTAGTTTCCTAGTGCGTACTTTGCGAGCTAG-TTAGGTGATGAATTC
TGCTACTTGAAGCTGTCAACCTTTTAGGAAGAAAAGACGCGTGTTCTGAATCTTGGAATTCTGAATCAAGTGCACGCATG
CAGTGCCAGTTTTTCTGAATTTGCTGATGTTACTCTTCATTCTGAATGAATCCTGGTATATTTATTTTTGTTCAATTAAT
GAGATCTCATTGTATTTTGTTCAAACTGAAATCGTTCATCAATTCTGTGCATAAATCTTGTATCCCACGCTTATGTACTT
CGATTTCGACCAAAAAACTTTGCTAACTGAGTTTGCTACACCCTCCGTCCCGGGCTGTCTGCTGGACATGTAAGGAAAAA
AACTGGATTGCCATACAACCCCGGAACTTTATACTATATGACCTCCTCGCCTGAGGCTCAACACGCCTCCGATCCTCGCC
GTATCCATAGGCCTTAATTAACCCCGCGGAACAATTTTTGAATTCAAATCCATGAACAATTTTCAATTTGTCAAGAGTTT
TTCAAATCCACCAGCAATTTTTGTATAAATTGATCAACTTTTAATGCTCAAGCATTTTTCAAATTTGCAAACATTTGTTG
AATTCATAATTTTTGAAATTCATGAACAGTTTTAGTATTCATGAACATTCTTTGAAAAGGTGAACAATTTTTGAGTTCAT
TCAAATTCATCAACTTATTTCGAATTTGCAAACATTTCCAAATTCGCTTTCATCTTTTGAATTCATATTTCTTTTTAATA
TCGCAAGAATTTTTTAAAATTCTTCAATTTCCTTTCGAATTCACGAACCATTTTTTAAATTCATGAACAAATTTGAATTC
ACAAACATTTTTTGAACCTTTTGGTTTATTTATGCAGTGAAAACAACAGAAAAAACGCATTCAAGAAACCCCACGATCGG
A
>chr3B_330
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---------TTATTATTAGGAATACACGAT-----GATAACTTGGAAAATAATAATTATAAGTCGGTTGGGCCGCGTGCA
GCCACAAAGGATCCGCCCGGGGCTTCCTATGTCGGTTGCAACGGACGCGCCACGCCATATAAGCGATCGCTCCGTCAGAC
CCAACCCATCGTCGTCTCCTCCAATCCAATCCCCCATCTCGAT-----CCGATCCGATCTCCGAACCCTAGCTAAACCCC
GACCACCGCCACCGCCGCCAATGGCTCCTCCCGGCGCCGCCCTCCTCGGCCCGCCGCAGGCCATCGTCGACACCGAGATG
------GCCGACCGCAAGCCCGACGCCAAGAAGCCGACGCCCACCAAGCAGCCCAAGCCGAAGCGCGCGCCCCGCGGGTA
CTCCTTCGACTCTTCCTCCTCCACGACATCATCGGACGGCTACAGCGACTCGGACGATGACGAGCCCCGGCGCAAGCCGG
CGG------------------CGCCCCATGCCCCC---------GGCCGCGCGCTGGCGTACGCCTCGTCGGGCGACCCC
TGCGTCGACTTCTTCTTCCAGGTCGTGCCCGGCGCGACCGCGCCCGCCGACGTGGCCGCGCTGCTCGGCGTCGCGTGGGC
CGCCGACGCGCGCACGGCGCTGCGCCTCGTGTGCCACCTCCGCGGCGTCCGCGGCCTCGGCAAGGCCGACCGCGAGGGCT
TCTACGCCGCCGCGCTCTGGATGCACGCCAACCACCCGCGCACGCTCGCCGCCAACCTCGGGGGATTCGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACCAGGACGACGTCGC
CGCGGCCGCCGCCATCCAGTACCGCCGCGGCGGGCCCGTGGGCAAGAGCGGCAAGCGGCGCTGCGTCGG-----------
-CGGCGGCAGGGCCGCCGCCGCGGAGGCCGCCAAGGCCCGGCGCGAGAAGGAGGCGGAGCACGCGCAGGCCGTGCTCGCC
CGCTACGACTCCGACGAGGCCTTTCGCAACCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGCTGCTCAAGTCGGACCT
GGAGCACCTGCGCGCGGGCGAGACGGCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTGCGCTCGTCGTACGACC
GCGCGACGCTGCTCTGCGAGGCCATCGCGCGCCGCGTCTTCCCGCGCGACTCGAGCCCCGAGTACCTCGCCATCCCCGAC
AAGCACTACGCCTACCGCGTCCGCAGCCGGCTCCGGCGCGAGGTGCAGGTGCCGCTGCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGCGCCCGCAAGTGGGACGAGCTGCCCTA--CGCGCGCGTCGCCTCCACGGCCATGCGCCAGTACAAGGA
GGCGTTCGACAAGCACGACAAGGAGGGCGTGGCCGGCTTCTACGACGAGGTGCGCGCCGGGCTGTCCAGGATCCCCGCCG
GCGCGGTGCTGCCGCACGTGATCGTCGCCGCCGCGCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCGC
ATGGTCTCCTCCCTCGCCTCGGAGGGCCGCCTCACCAACTGCATCGCCATGTGCGCGCTGTCCGGCTGCACGTCGGACAA
GCCGCCCGCCGCGGCCGCCATCGCGCTGGGGCTGCTCATCTCGGAGCTGAGCCAGGACCCCTGGAAGGGGCGCGTCATCA
CCTTCGACGCCGCCCACCAGCTGCACAGGGTCCGCGGCGCGTCGCTGGTGGAGAAGCTCCGGCCGCTCGCCGCCGTGACC
CCGCGGCGCGGCGCCAACCTGCAGGCGGTGTTCAACAAGATCCTGAACGTGGCGGTGGCGGGCGCGCTGGCCAAGGACCA
GATGGTGCGGCGCGTCTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGACGGGCGGCGAGGCGTGGGTGTCGGAGCACG
AGGCCATCCGCAAGCGCTTCGCGGCCGAGGGCTTCGCGGCGCCCGAGGTGGTGTTCTGGAACGTGGGGAGCACGTCCAAG
GCGG---CGTCGCCGGTGGTGGCCGCGCAGGCCGGCGTGGCGCTGGTGAGCGGCTACTCCAAGAACCTGGTGCGCCTCTT
CCTGGAGGCCGACGGCGTGCTCACCCCCTCCGCCATCATGGCCGACGCCATCTCCGGCCCCGACTACGACGCCCTCGAGG
TGCTCGACTGA------TTCTTGGATCCATCCGT-----------CCAAGAATGATCGTCAGTCCGTCCATCCATCCATC
GGTTTAGTTTGCTTTTTCGTCCCGTCCATCGATTTAGTTTCCTGCTGCGTACTTTTGAGTAGTTATTAGGTGATGAATTC
AGCTACCTGAAGCTGTGAACCTT--AGGAAGAAAAGACGTGTGCTCTGAATCTTGGAATTCTGAATCAAGTG--------
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>chr5B_555
--------------------------------------------------------------------------------
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------------------CCATGGCGCCCCCCGCGGCCGCGCTCCTCGGCCCTCCCATCGCCATCGTCGACACCGACATG
------GCCGACCGCAACCCCAAGGCCAAGCCGACGCCGAAG------------AAGCCGAAGCGCGCGCAGCTCCG---
------CGGCGA---------CTCGTCCTCATCGGACGACGACTCCGA------GGGCGACTACAGCGACACCGAGCCGC
TCCGCTCCTGCGTCTCGCGCCCGCCGAAAGCCGAG---------GGGAAGGCGCTCGCGTACGCCTCGTCGGGCGACCCC
TGCGTCGACTTCTTCTTCCAGGTCGTCCCGGGCGCCACGGCGGCCGCCGACGTGGCCGCGCTCCTCAGCGTCGCCTGGGC
CGGCGACGCGCGCACGGCGCTCCGCCTCGTGTGCCACCTCCGCGGCGTCCGCGGCCTCGGCAAGTCCGACCGGGAGGGCT
TCTACGCCGCCGCGCTCTGGATGCACGCCAACCACCCGCGCACCCTCGCCGCCAACCTCGCCTCCTTCGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCGTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACGGCGACGACAGCAC
CAGGGTCC------------ACCGCCGCGGCGGCTCCCG------TAACAACAAGCGGCGCTGCGTCGG-----------
-CG------------CGGCCGCCGAGGCCGCCAAGGCCAGGCGCCAGAAGGAGACGGAGCACGCGCAGGTCGTCCTCTCC
CGCTACGACTCGGACGAGAGCTTCCGCTTCCTCTACGACCGCGTCGCCGAGCTCTTCGCCGAGCTGCTCAAGTCCGACCT
CGAGCACCTGCGCTCGGGCGACACGGCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTCCGCTCGTCCTACGACC
GCTCGACCCTGCTCTGCGAGGCCATCGCCCGCCGCGTCTTCCCGCGCGACTCGAGCCCGGAGTACCTCAGCATCCCCGAC
AAGCACTACGCGTACCGCGTCCGCAACCGCCTCCGCCGCGAGGTGCACGTGCCGCTGCGCAAGGTCCTGGAGCTCCCGGA
GGTGTACATGAGCGCCCGCAAGTGGGACGAGCTCCCCTA--CGCGCGCGTCGCGTCGCGGGCGATGCGGCAGTACAAGCA
GGCCTTCGACAAGCACGACAAGTCGGGCGTGGCCGGCTTCTACGACGAGGTGCGCGCCGGGCTGACCAGGATCCCGGCGG
ACGCGGTGCTGCCGCACGAGATCTTGGCGGCGGCCCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCAC
ATGGTGGCATCCCTGGCGTCGGAGGGCCGGCTCAGCAACTGCATCGCCATGTGCGCCCTCTCGA---GCTCGGTGGAGAA
GCCGCCCGCGGCCGCGGCCATCGCGCTGGGGCTGCTGATCTCGGAGCTGAGCAAGGACCCGTGGAAGGGGCGGGTGATCA
CCTTCGACGCCACGCACCAGCTGCACAAGGTGCGCGGCGCGTCGCTGGTGGAGAAGCTCCGGACGCTGGCCGCCGTGAGG
GCCCAGAAGGGCGCGAACCTGCAGGCCGTCTTCAACAAGATCCTGAACGTGGCGGTGGCCGGCGCGCTGTCCAAGGACAT
GATGGTGAAGCGGGTGTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGGTGGGCGGCGAGGCGTGGGTGTCGGAGCACG
AGGCCATCAAGAAGAAGTTCGCGGCCGAGGGGTTCGCCGTGCCGGAGGTGGTGTTCTGGAACGTGG---GCACGTCCAAG
GCGT---CGGTGCCGGTGGTGGCGGCGCAGGCCGGCGTGGCGCTGGTGAGCGGCTACTCGAAGAACCTGGTGCGGTTGTT
CCTGGAGGCGGACGGCGTGCTCACCCCGTCGGCCATCATGGCGGACGCCATCTCCGGCCCCGAGTACGACGCCCTCGAGG
TGCTCGACTGA---------------------------------------------------------------------
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>chr5D_555
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------------------CCATGGCGCCCCCCGCGGCCGCGCTCCTCGGCCCTCCCATCGCCATCGTCGACACCGACATG
------CCCGACCGCAAGCCCAAGGCCAAGCCGACGCCGAAG------------AAGCCGAAGCGCGCGCAGCTCCG---
------CGGCGA---------CTCGTCGTCATCGGACGACGACTCCGACTCCGAGGGCGACTACAGCGACGCCGAGCCGC
CCCGCTCCTGCGTCTCGCGCCCGCCGAAGGCCGAG---------GGGAAGGCGCTCGCGTACGCCTCGTCGGGCGACCCC
TGCGTCGACTTCTTCTTCCAGGTCGTCCCGGCCGCCACGGCGGCCGCCGACGTGGCCGCGCTCCTCAGCGTCGCCTGGGC
CGGCGACGCGCGCACGGCGCTCCGCCTCGTGTGCCACCTCCGCGGCGTACGCGGGCTCGGTAAGTCCGACCGGGAGGGCT
TCTACGCCGCCGCGCTCTGGATGCACGCCAACCACCCGCGCACCCTCGCCGCCAACCTCGCCTCCTTCGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCGTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACGGCGACGACAGCAC
CAGGGTCC------------ACCGCCGCGGCGGCTCCCG------TAACAACAAGCGGCGCTGCCTCGG-----------
-CG------------CGGCCGCCGAGGCCGCCAAGGCCAGGCGGCAGAAGGAGACGGAGCACGCGCAGGTCGTCCTCGCC
CGCTACGACTCGGACGAGAGCTTCCGCTTCCTCTACGACCGCGTCGCCGAGCTCTTCGCCGAGCTGCTCAAGTCCGACCT
CGAGCACCTGCGCTCGGGCGACACGGCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTCCGCTCGTCCTACGACC
GCTCGACCCTGCTCTGCGAGGCCATCGCCCGCCGCGTCTTCCCGCGCGACTCGAGCCCGGAGTACCTCAGCATCCCCGAC
AAGCACTACGCGTACCGCGTCCGCAACCGGCTCCGCCGCGAGGTGGACGTGCCGCTGCGCAAGGTCCTGGAGCTCCCGGA
GGTGTACATGAGCGCGCGCAAGTGGGACGAGCTCCCCTA--CGCGCGCGTGGCGTCGCGGGCGATGCGGCAGTACAAGCA
GGCCTTCGATAAGCACGACAAGTCAGGCGTGGCCGGCTTCTACGACGAGGTGCGCGCCGGGCTGACCAGGATCCCGGCGG
ACGCGGTGCTGCCTCACGAGATCTTGGCCGCGGCCCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCAC
ATGGTGGCGTCCCTGGCGTCGGAGGGCCGCCTCAGCAACTGCATCGCCATGTGCGCCCTCTCGA---GCTCGGTGGAGAA
GCCGCCCGCGGCCGCGGCCATCGCGCTGGGGCTGCTGATCTCGGAGCTGAGCAAGGATCCGTGGAAGGGGCGGGTGATCA
CCTTCGACGCCACGCACCAGCTGCACAAGGTGCGCGGCGCGTCGCTGGTGGAGAAGCTGCGGACGCTGGCCGCCGTGAGG
GCACAGAAGGGCGCGAACCTGCAGGCCGTCTTCAACAAGATCCTGAACGTGGCGGTGGCCGGCGGGCTGTCCAAGGACAT
GATGGTGAAGCGGGTGTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGGTGGGCGGCGAGGCGTGGGTGTCGGAGCACG
AGGCCATCAAGAAGAAGTTCGCCGCGGAGGGGTTCGCCGTGCCCGAGGTGGTGTTCTGGAACGTGG---GCACGTCCAAG
GCGT---CGGTGCCGGTGGTGGCGGCGCAGGCCGGCGTGGCGCTGGTGAGCGGCTACTCGAAGAACCTGGTGCGGCTGTT
CCTGGAGGCGGACGGCGTGCTCACCCCGTCGGCCATCATGGCCGACGCCATCTCCGGCCCCGAGTACGACGCCCTCGAGG
TGCTCGACTGAGAGC-----------------------------------------------------------------
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>chr5A_555
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------------------CCATGGCGCCCCCCGCGGCCGCGCTCCTCGGCCCTCCCATCGCCATCGTCGACACCGACATG
CCCGACGCCGACCGCAAGCCCAAGGCCAAGCCGACGCCGAAG------------AAGCCCAAGCGCGCGCAGCTCCG---
------CGGCGA---------CTCGTCGTCGTCGGACGA------CGACTCCGAGGGCGACTACAGCGACGCCGAGCCGC
CCCGCTCCTGCGTCTCGCGCCCGCCGAAGGCCGAG---------GGGAAGGCGCTCGCGTACGCCTCGTCGGGCGACCCC
TGCGTCGACTTCTTCTTCCAGGTCGTCCCGGGCGCCACGGCGGCCGCCGACGTGGCCGCGCTCCTCAGCGTCGCCTGGGC
GGGCGACGCGCGCACGGCGCTCCGCCTCGTGTGCCACCTCCGCGGCGTCCGCGGGCTCGGCAAGTCCGACCGCGAGGGCT
TCTACGCCGCCGCGCTCTGGATGCACGCCAACCACCCGCGCACCCTCGCCGCCAACCTCGCCTCCTTCGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCGTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACGGCGACGACAGCAC
CAGGGTCC------------ACCGCCGCGGCGGCTCCCGCGGCCGTAACAACAAGCGGCGCTGCGTCGG-----------
-CG------------AGGCCGCGGAGGCCGCCAAGGCCAGGCGCCAGAAGGAGACGGAGCACGCGCAGGTCGTCCTCGCC
CGCTACGACTCGGACGAGAGCTTCCGCTTCCTCTACGACCGCGTCGCCGAGCTCTTCGCCGAGCTGCTCAAGTCCGACCT
CGAGCACCTTCGCTCGGGCGACACGCCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTCCGCTCGTCCTACGACC
GCTCGACCCTGCTCTGCGAGGCCATCGCCCGCCGCGTCTTCCCGCGCGACTCGAGCCCGGAGTACCTCAGCATCCCCGAC
AAGCACTACGCGTACCGCGTCCGCAACCGGCTCCGCCGCGAGGTGCACGTGCCGCTGCGCAAGGTCCTGGAGCTCCCGGA
GGTGTACATGAGCGCGCGCAAGTGGGACGAGCTCCCCTA--CGCGCGCGTGGCGTCGCGGGCGATGCGGCAGTACAAGCA
GGCCTTCGACAAGCACGACAAGTCGGGCGTGGCCGGTTTCTACGACGAGGTGCGCGCCGGGCTGACCAGGATCCCGGCGG
ACGCGGTGCTGCCGCACGAGATCTTGGCCGCGGCCCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCAC
ATGGTGTCCTCCCTGGCGTCTGAGGGCCGGCTCAGCAACTGCATCGCCATGTGCGCCCTGTCGA---GCTCGGTGGAGAA
GCCACCGGCGGCCGCGGCAATCGCGCTGGGGCTGCTGATCTCGGAGCTGAGCAAGGATCCGTGGAAGGGGCGGGTGATCA
CCTTCGACGCCACGCACCAGCTGCACAAGGTGCGCGGCGCGTCGCTGGTGGAGAAGCTCCGGACGCTGGCCGCCGTGAGG
GCACAGAAGGGCGCGAACCTGCAGGCCGTCTTCAACAAGATCCTGAACGTGGCGGTGGCCGGCGCGCTGTCCAAGGACAT
GATGGTGAAGCGGGTGTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGGTGGGCGGCGAGGCGTGGGTGTCGGAGCATG
CGGCCATCAAGAAGAAGTTCGCGGCGGAGGGGTTCGCCGTGCCGGAGGTGGTGTTCTGGAACGTGG---GCACGTCCAAG
GCGT---CGGTGCCGGTGGTGGCGGCGCAGGCCGGCGTGGCGCTGGTGAGCGGCTACTCGAAGAACCTGGTGCGGCTGTT
CCTGGAGGCGGACGGCGTGCTCACCCCGTCGGCCATCATGGCGGACGCCATCTCCGGCCCCGAGTACGACGCCCTCGAGG
TGCTCGACTGA---------------------------------------------------------------------
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>chr3A_791
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--------------------------------------------------GCGCTGGCGTACGCCTCGTCGGGCGACCCC
TGCGTCGACTTCTTCTTCCAGGTCGTGCCCGGCGCGACCGCGCCCGCCGACGTGGCCGCGCTGCTCGGCGTCGCGTGGGC
CGCCGACGCGCGCACGGCGCTGCGCCTCGTCTGCCACCTCCGCGGCGTGCGCGGCCTCGGCAAGGCCGACCGCGAGGGCT
TCTACGCCGCCGCGCTCTGGATGCACGCCAACCACCCGCGCACCCTCGCCGCCAACCTCGGGGGATTCGCCCGCTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTACCGCGTCCTCCACGGCCCCCGCGACGAGCGCAAGGACCAGGACGACGTCGC
CGCA---GCCGCCATCCAGTACCGCCGCGGCGGGCCCGGGAGCAAGAGCGGCAAGCGGCGCTGCGTCGG-----------
-CGGCGGCAG------------GGAGGCCGCCAAGGCCCGGCGCGAGAAGGAGGCGGAGCACGCGCAGGCCGTGCTCGCG
CGCTACGACTCCGACGAGGCCTTCCGCAGCCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGCTGCTCAAGTCGGACCT
GGAGCACCTGCGCGCGGGCGACACGGCCAAGATCGGGCTCGCCGCCAAGTGGTGCCCGTCGCTCCGCTCGTCGTACGACC
GCGCCACGCTGCTCTGCGAGGCCATCGCGCGCCGCGTCTTCCCGCGCGACTCGAGCCCCGAGTACCTCGCCATCCCCGAC
AAGCACTACGCCTACCGCGTCCGCAGTCGGCTCCGGCGCGAGGTGCAGGTGCCGCTGCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGCGCCCGCAAGTGGGACGAGCTGCCCTA--CGCGCGCGTCGCGTCCACGGCCATGCGCCAGTACAAGGA
GGCGT-CGAGAAGCACGACAAGGAGGGCGTGGCCGGCTTCTACGACGAGGTGCGCGCCGGGCTCTCCACGATCCCCGCCG
ACGCGGTGCTCCCGCACGTGATCGTCGCCGCCGCGCTCAAGGGCGAGCACGACGAGTCGGCGGAGCTCCAGTGGCGCCGC
ATGGTCTCCTCCCTCGCCTCGGAGGGCCGCCTCACCAACTGCATCGCCATGTGCGCGCTGTCCGGCTGCACGTCGGACAA
GCCGCCCGCCGCGGCCGCCATCGCGCTGGGGCTGCTCATCTCGGAGCTCAGCCAGGACCCCTGGAAGGGGCGCGTCATCA
CCTTCGACGCCGCCCACCAGCTGCACAAGGTGCGCGGCGCGTCGCTGGTGGAGAAGCTGCGCCCGCTCGCCGCCGTGACC
CCGCGGCGCGGCGCCAACCTGCAGGCGGTGTTCAGCAAGATCCTGAACGTGGCGGTGGCGGGCGCGCTGGCCAAGGACCA
GATGGTGCGGCGCGTCTTCGTGCTGAGCGACATGGAGTTCGACGGGTGGACGGGCGGCGAGGCGTGGGTGTCGGAGCACG
AGGCCATCCGCAAGCGCTTCGCCGCCGAGGGCTTCGCCGCGCCCGAGGTGGTGTTCTGGAACGTGGGGAGCACGTCCAAG
GCGGCGGCGTCGCCGGTGGTGGCCGCGCAGGCCGGCGTGGCGCTGGTCAGCGGCTACTCCAAGAACCTGGTGCGCCTCTT
CCTGGAGGCCGACGGCGTGCTCACCCCCTCCGCCATCATGGCCGACGCCATCTCCGGCCCCGACTACGACGCCCTCCACG
TGCTCGACTGATTACCCTTCTTGGATCCCCAGCCCAGCCAG----CCAGCCATGATCGTCAGTCCATCCATC----GA--
--TTTAGTTTGCTTTTTCGTCCCGCCCATCGATTTAG-------------------------------------------
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>chr5B_974
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GAGGGCT
TCTACATCACCGCTCTCTAGATGCACGCCATCCACCCGCGCACGCTCGCCGCCAACCTCGTTGGTTTTGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTATTGTTTCCTCCACGGCCCCCGTGATGAGCGCAAGGACTGGGACGACGT---
----------------------TGCCGCGGCGGCGGCGGGGTCAAGAGCGGCAAGCGGCGCTGCGTCGG-----------
-CGGCCTTGCCGCCGCCGCGGCTGAGGCCGCCAAGGCCCGGCGCGAGAAGGAGGCGGAGCACGCGCAGGCCGTGCTCGGG
CGCTACGACTCTGACGAGGCCTTCCGCAACCTCTACAACGGCGTCGCTGACCTCTTCGCCGGGCTGCTCAAGTCGGACCA
GGAGCACCTGCACGCGGGCGGCACGGCCAAGATCGTGTTCGCCGCCAAGTGGTGGCCGTCGTTGCGCTTGTCGTACGACC
GCGCGACGCTGCTCTGCGAGGCCATCGCGTGCCGGGTATTCCCGCGCGACTTGAGCCCCGAGTACCTCGCTATCCCCGAC
AAGCACTATGCCTACCGCGTCCGCAACCGGCTCCGCTGCGAGGTGCAGGTAACGCTCCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGCGCCTGCAAGTGGGACGAGCTTCCCTGCGCGCGCGCTTGGCGACCACAGCCATGGGCCAGTACAAGAG
GCGT----------------------------------------------------------------------------
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>chr5A_974
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-------------------------------------------------------------------------GAGGGCT
TCTACGTCGCCGCTCTCTGGATGCATGCCATCCACCCACGCACGCTCGCCCCCAACCTCACCGGCTGCGCCAGGTTCGGC
TGCTTCAAGGACCTCCCCGAGATCCTCTATCATTTCCTCCATGGCCCCCGCGATGAGCGCAAGGACCAGGACGATGT---
----------------------CGCCGCGGCGGCCCCGGGGGCAAGAGAGGCAAGCGGCGCTGCGTCGG-----------
-CGGCCTTGCCGCCGCCGCGGCTGAGGCCGCCAAGGCCCGGCGCAAGAAGGAGGCGGAGCACACGCAGGCCGTGCTCGCG
CGCTATGACTCTGACGAGGCCTTCCACAACCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGCTGCTCAAGTCGGACCT
GGAGCACCTGCGCGCGGGCGACACAGCCAAGATCGTGTTCACCGCCAAGTGGTGCCCGTCACTGCGCTCGTTGTATGACC
GCGCAACGCTGCTCTACGAGGCCATCGCGCGCCGGGTCTCCCCGCGCGACTCGAGCCCCGAGTACCTCGCTATCCCTGAC
AAGCACTACGCCTACCGCGTCCGCAATCGGCTCCGCCCTGAGGTGCACGTGCCGCTCCGCAAGGTGCTTGAGCTCCCCGA
GGTCTACATGAGCGCCCGCAAGTAGGACGAGCTGCCCTACGCGCGCGCGTGGCGTCCACGGCCATGCGCCAGTACAAGGA
GCCGT---------------------------------------------------------------------------
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>chr1D_974
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-------------------------------------------------------------------------GAGGGCT
TCTACGTCGCCGCTCTCTGGATGCACGCCATCCACCCGCGCACGCTAGCCGCCAACCTCGCCGGCTTCGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTATCGTTTCCTCCACGGCCCCCGCGATGAGCGCAAGGACTAGGACAACGT---
----------------------CGCCGCGGCGGCCCCGGGGGCAAGAGCGGCAAGCGGCGCTGCGTCGG-----------
-CGGCCTTGCCGCCGCCGCGGCTGAGGCCTCCAAGGCCCGGCGCGAGAAGGAGGCGGAGCACGCGCAGGCCGTGCTCGCG
CGCTACGACTCTGACGAGGCCTTCCGCAACCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGCTGCTCAAGTCGGACCA
GGAGCACCTGCACGCGGGCGACACGGCCAAGATCGTGTTCGCCGCCAAGTGGTGCCCGTCGCCGCGCTCGTCGTACGACC
GCGCGACGCTGCTCTGCGAGGCCATCGCGCGCCGGGTCTTCCCGCGCGACTCGAGCCCCGAGTACCTCGCTATCCCCGAC
AAGCACTACGCCTACCGCGTCCGCAACCGGCTCCGCCGCGAGGTGCAGGTGCCGCTCCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGCGCCGGCAAGTGGGACGAGCTGCCCTGCGCGCGCGCTTGGCGTCCACGGCCATGCGCCAGTACAAGAG
GCGT----------------------------------------------------------------------------
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>chr4A_974
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-------------------------------------------------------------------------GAGGGCT
TCTATGTCGCCGCTCTCTGGATGCACGCCATCCACCCGCGCACGCTCGCCGCCAACCTCGCCGGCTTCGCCAGGTTCGGC
TGCCTCAAGGACCTCCCCGAGATCCTCTATCATTTCCTCCACGACCCCCGCGATGAGCGCAAGGACTAGGAAGACGT---
----------------------CGCTGCGGCAGCCCCGGTGGCAAGAGCGGCAAGCGGCGCCGCGTCGACAGCCTTGCCG
CCG------------CCGCGGCTGAGTCCGCCAAGGCCCGGCGCGAGAAGGAGGCGGAGCACGCGCAGGCCATGCTCGCA
CGCTACGACTCTGACGAGGCCTTTCACAACCTCTACGACGGCGTCGCCGACCTCTTCGCCGGGATGCTCAAGTTGGACCA
GGAGCACCTGCACGCGGGCGACACGGCCAAGATCGTGTTCGCCGCCAAGTGGTGCATGTCGCTGCGCTCGTCGTACGACT
GTGCGACGCTGCTCTGCGAGGCCATCACGCGCCGGGTCTTCCCGCGCGACTCGAGCC--GAGTACCTCGCTATCCCCAAC
AAGCTCTATGCCTACCGCATCCGCAACCGGCTCCGCCATGAGGTGCAGGTGCCGCTCCGCAAGGTGCTCGAGCTCCCCGA
GGTCTACATGAGGGCCGGCAAGTGGGACGAGCTGCCCT--GCGCGCGCTTGGCGTCCACGGCCATGCGCCAGTACAAGAG
GCGT----------------------------------------------------------------------------
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>chr7D_1963
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------------------------------------------GGAGCTGAGCCAGGATCCCTAGAAGGGGCGCGTCATCA
CCTTTGACGCCATCCACCAGCTGCACAAGGTGCGCGGCGCGTTGCTAGTGGAGAAGCTGCGCCCGCTGGCAGCCATGACT
CCGCAGCGCGGCGCCAACCTGCAGGCGGTCTTCAACAAGATCCTGAACATGGCGGTGGCGGGCGCGCTGGCCAAGGACCA
GATGGTGCGTCGCATGTTCGTGTTGAGGGACATGGAGTTCGACGGGTGGACGGGTGGCGAGGCGTGGGTGTCAGAGCACG
ACGTGATCCGCAAACGCTTCGCAGCCGAGGGGTTCGCCGCGCTAGAGGTTGTGTTCTAGAACGTGG---GCACGTCCAAG
GT---GGCATCGCCGGTGGTGGCCGCACAGGCCGGCTTGGCGCTGGTGAGCGGCTAGTCGAAGAACCTGGTGCACCTCTT
CCTGGAGGCCGACGGCGTGCCCACCCCCTTGCGCATCATGGTCGACGCCATCTCGGCACCCTAGTACGACGCCCTCAAGG
TGCTCGACTGAGTGCCTGCCTCCTGCCACATCAACTCTTCGCTCCCCAGCCATGATCGTCGGTTCATCCATC----GA--
--TTTAGTTTGCTTTTCCGTTCCGTCCATCGATTTAGTTTCCTACTACGTACTTTG------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS-----------------SS-SSSSSS--S-------------S-----S----------------------
---------------------S-S----------------------------------------------------S---
----------S--------------------------------SSSSS------S-------S---------S-SSSSS-
S-SS----------------------------------------------------------------------------
----------------------S----------------------------S----------------------------
-----S------------------------------------------------------------------------SS
----------------------------------SSSSSSSSSS--S-----------------S---------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------S----------------------------S------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S----------------S---------------
--------------------------------------------------------------------------------
----------------------------------S--------------------------------SS-----------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
---------------S----S-----------------------------------------------------------
---------S----------------------------------S-----------SSSSSSSS----------------
S-----S---------S------SS--------------S---S----------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_558
--------------------------------------------------------------------------------
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----------------------------------------------------------CTCCAAACCCTAGCCAGCAA--
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-
>reverse_2581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------GCAGCCATGATCGTCAGTCC----------------------------------------
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-
