>input_sequence_50040
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----------------------------------------------------ATGGCTCCAACCTCCCTGCAGAGGCCGA
GGAAGCCGAGGTGCCCCTCCCACGCCATGCTCTCGCTCTCCCCTGCCCTCCTCTCCCTCCTCCTCCTCGTCCCCTTCCTC
TACCTCCTCATCCACCGTTCCGCGTGCTCCCCGCCCTTCAGCAACCTCACGACCGCCAGGCGCTCATCCTCGAGCGTCAG
CGGCTTCGCCGGAGACCTTCGCGACATCGAGTTCTCGTGGAACCACCTGCCCTTCATGTCGTCGAAGCCGCCCTCCGCCA
AGCTCAAGATCGCCGTGTTCTCGCGGAAGTGGCCCGTGGCCACGGCCCCCGGCGGCATGGAGCGGCACGCGCACACGCTG
CACACGGCGCTCGCCGCGCGGGGCCACCGCGTCCACGTGTTCACCTCGCCTCCGCCGCATACCGAGGCCGCGCCCTCGCC
CTCCGCCGATGGGCCTCAGCTGCATTTCCTTGACGGCACCCCCGGCCAGTGGCGGTGCGACGAGGCGTGGAAGCTGTACG
AGGCCGAGGGCGACAACGATCCATTCGACGTCATCCACTCCGAGAGCGTGGCGGTGTTCCACCGGTACGCGCGCGGCGTG
CCCAACCTGGTCGTGTCGTGGCACGGAATCTCCCTGGAGGCGCTGCACTCGGGTATCTACCAGGACCTCGCCCGCGGCGA
GGATGAGCCCATGTCGCCGGCGTTCAACCAGAGCCTGTCGCAGTCGGTGCACCGGGTGCTGTCCGAGGTGCGCTTCTTCC
GGAGCTACGCGCACCAGGTGGCCATCAGCGACTCCACCGGGGAGATGCTCCGCGACGTGTACCAGATCCCCGGCCGCCGC
GTGCACGTAATCCTGAACGGCGTGGACGAGGCGCAGTTCACTCCGGACACGGAGCTCGGCCGCGCCTTCAGGGAAGAGAT
CGGGCTCCCCAAGAGCGCCGACCTCGTGCTCGGCGTGTCCGGGAGGCTCGTCAAGGACAAGGGCCACCCACTGCTCTACG
AGGCCTTCTCCAAGCTCGCCCTCCGCCACCCGAATGTGTACCTCCTCGTTGCCGGCAAGGGGCCGTGGGAGTCGAGGTAC
ATGGACCTGGGACGCAACGCCAAGGTGCTTGGCGCGGTGCCGCCCGGGAAGCTCAGGGCGTTCTACAACGCGCTGGACGT
GTTCGTGGACCCGACGCTGCGGCCGCAGGGCCTGGACCTGACGCTCATGGAGGCGATGCAATGCGGCAAGCCGGTGGTGG
CCACGCGGTTCCCGAGCATCAAGGGAAGCATCGTGGTGGACGAGGAGTTCGGCCACATGTTCGCGCCCAACGTGGAGTCG
CTGCTGGAGAGTCTGGAGGCTGTGGTGCAGGATGGCGCCCGGCGCGCCGCGGAGCGCGGCCGGGCGTGCAGGGAGTACGC
CAGGTCCATGTTCGCGGCCACCAAGATGGCACTAGCGTACGAGAGGCTCTTCCTTTGTGTCAAGAACGAGACCTTCTGTG
CGTACCCTTCTGAGTTTGATTAG---------------------------------------------------------
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>chr3D_1_TraesCS3D01G236900
GAGAGTTGCCATCTGCTTACAAGCAAAGCTAGGGCAGTTGCCATGTACCCTGCAAAAACACATGGCAACTGCCAGCTTTG
GGTGTGGGCGAGGAGACGGGCGTGTGGGCAAAATGATAAACGCCCACACACCAGCCCCCTCTGCGTGCGTGAAACTGGTG
TGTGGGCGAATTGCTAAACGCCCACACACCAGCCCCCCGTATGGTGAAAAAGAACGTGTGGGCGACCAGATGAATGCCCA
CACACCAGCTTAGTCCTACGTGGCACACAAAAACTGCTAGAACGCACCAAGATTCGTGCAGAATTGGTTGGACGAAGATC
CATGCGTGTGGGCGAGTTGCCAGACGCCCACACGTGTGGGTGTTAGACTTTTCGAAAGAAAATAGAAAGAAAAAAACAGA
GAAGAAAAGCGCTAGCAGCAAACGAGCGAAAGCCTCGATCGCTAAGAACGGGCCGGCCCAATACTGTAGGCGGGACAGAA
GGTACTCCTGCTATAAGCGAGATAT---------AGGGCTCGCCTTGCTCGATTCCAGTGATGCGCATCTGACGGATC-G
GGATACGTTCGTATCTCTTGCAATCTGGCAACTGTTCGCCATTTAATTTTTCCTCTCCCCACTTCCCCCAAAAAAATCTA
AATATCTGTGCGTTAATTTTGCTACAAAAAATCTTGTACCCTAATTGAAAATGAAAATCGTTCTCAAAAAAAAT-TTGAA
AACGAAAATCTGAAACTAGCGAAATTCACATTGCACGATGATCACATCCCCCATGGCCATCTTCCTAAGTAACTTCAGGC
ATGGAAAGCAAGCATGAAGTTCGCA-CCCCCGATGTCAACACCTTACAACGCACTCCAATTCCACTCTCCCTCCTTCCAA
AAGGTCTCATAAACTGCTGTATTTCCGCCCGTGTTCCTTCTCCCTTGTTTCCATCTTCCTTTGTATGCAGCCTTCATGCA
TGCATGACTGACTGTCTAGCTAGCCCGAGCAGTAGAGCTAGTGCATGACGTGATGGCTCCAACCTCCCTGCAGAGGCCGA
GGAAGCCGAGGTGCCCCTCCCACGCCATGCTCTCGCTCTCCCCTGCCCTCCTCTCCCTCCTCCTCCTCGTCCCCTTCCTC
TACCTCCTCATCCACCGTTCCGCGTGCTCCCCGCCCTTCAGCAACCTCACGACCGCCAGGCGCTCATCCTCGAGCGTCAG
CGGCTTCGCCGGAGACCTTCGCGACATCGAGTTCTCGTGGAACCACCTGCCCTTCATGTCGTCGAAGCCGCCCTCCGCCA
AGCTCAAGATCGCCGTGTTCTCGCGGAAGTGGCCCGTGGCCACGGCCCCCGGCGGCATGGAGCGGCACGCGCACACGCTG
CACACGGCGCTCGCCGCGCGGGGCCACCGCGTCCACGTGTTCACCTCGCCTCCGCCGCATACCGAGGCCGCGCCCTCGCC
CTCCGCCGATGGGCCTCAGCTGCATTTCCTTGACGGCACCCCCGGCCAGTGGCGGTGCGACGAGGCGTGGAAGCTGTACG
AGGCCGAGGGCGACAACGATCCATTCGACGTCATCCACTCCGAGAGCGTGGCGGTGTTCCACCGGTACGCGCGCGGCGTG
CCCAACCTGGTCGTGTCGTGGCACGGAATCTCCCTGGAGGCGCTGCACTCGGGTATCTACCAGGACCTCGCCCGCGGCGA
GGATGAGCCCATGTCGCCGGCGTTCAACCAGAGCCTGTCGCAGTCGGTGCACCGGGTGCTGTCCGAGGTGCGCTTCTTCC
GGAGCTACGCGCACCAGGTGGCCATCAGCGACTCCACCGGGGAGATGCTCCGCGACGTGTACCAGATCCCCGGCCGCCGC
GTGCACGTAATCCTGAACGGCGTGGACGAGGCGCAGTTCACTCCGGACACGGAGCTCGGCCGCGCCTTCAGGGAAGAGAT
CGGGCTCCCCAAGAGCGCCGACCTCGTGCTCGGCGTGTCCGGGAGGCTCGTCAAGGACAAGGGCCACCCACTGCTCTACG
AGGCCTTCTCCAAGCTCGCCCTCCGCCACCCGAATGTGTACCTCCTCGTTGCCGGCAAGGGGCCGTGGGAGTCGAGGTAC
ATGGACCTGGGACGCAACGCCAAGGTGCTTGGCGCGGTGCCGCCCGGGAAGCTCAGGGCGTTCTACAACGCGCTGGACGT
GTTCGTGGACCCGACGCTGCGGCCGCAGGGCCTGGACCTGACGCTCATGGAGGCGATGCAATGCGGCAAGCCGGTGGTGG
CCACGCGGTTCCCGAGCATCAAGGGAAGCATCGTGGTGGACGAGGAGTTCGGCCACATGTTCGCGCCCAACGTGGAGTCG
CTGCTGGAGAGTCTGGAGGCTGTGGTGCAGGATGGCGCCCGGCGCGCCGCGGAGCGCGGCCGGGCGTGCAGGGAGTACGC
CAGGTCCATGTTCGCGGCCACCAAGATGGCACTAGCGTACGAGAGGCTCTTCCTTTGTGTCAAGAACGAGACCTTCTGTG
CGTACCCTTCTGAGTTTGATTAGTTTTCTCAGCAGCATGTGCACTTGCTTAGTGATTTATGGCACACTAATAATCATAAA
TACAGTATGTTAT---TT-----TTTCTTTTTCTCTCTCCTGCTTCCCACATGAACTGCCAGCTATGGATATTAATCGGG
TCTAAATTGTTTTAGGGAATGAGCGACACCTTATTCATAGCATAACAACTTTAGGTTGCTTGTAATGGGTAGTATCATAG
ATAAC-----------TAATACTACATTCCTAATGCATAGTATCATATATCG----------------------------
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--------------------------------------------------GTATCATAGATAACTTTAACTATTGTCATG
CATGACACATACTAGTAGTATAATATTTATTATTATACGGTATCAT---GATGATACTCTCATTACGACCAGCCTTATAC
AAAGTTTCAACT----AAAAAAATTATACAAAGTTTTCCGAATACATTTGA-AGGTACATCATAAAAGCTAAAAGAGTTC
GAAAAAATCACACATCCTATCATTTGGAGATACGTCATAAAAGCTAGAAAGATGCAAATTTGTGACCCTCGGGGTACC--
---------CTCGGACCCATCTTAGTTCAACCAAATGAACTGAATTTTCTGAAGTTATGTGGCTTCTGAAATTTTAGTTC
ACTTTTTTTCTTG-AGGGAAAGCCTCATGGCAC-TTTATTTAAACTGTGGCAGAGTTACATTTAAGAGTATATGTGCTAA
TAAAAACCTG------TCATCTACCCAATCATATCTAGTTTTACAATCATAACAAAACCTAGCTAGATAATGTGTCAATC
CATTTGCTTCCCTTGGACAATGCTTGAAAAAAG-----------------TGGAAACAATCTGCAAGTATTGCTGCATTA
GGGCTCCAAATGTCGGTCCTCCCATTGCACGCTTCAACCAGCTCGACAGTCGGACCACAATAACCTTAGTGCAGCTCACT
TAAGTAATTAGCTTCAGATCCTAAAGCAACTTCGGCGTCCCTGCAACAGCTTCACCCCAAGAATTCGAAAGAACTGCGGC
TAAGGCACCACCGCACCAGTGCCATTTACAAAACAAAAGACATC
>chr3A_386
AAAAAC--------------------------------------------------------------------------
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-----------------------------------------------------------------------AAAAACAGA
GAAGTAAAGCGCTAGCAGCGAACGAGCGAGCGCCTCGATCGCT-AGAACGGGCCGGCCAAATACTGTAGGCGGGACAGAA
GGTACTCTCGCTATAGGCGAGATATGGCGGCAGAAGCGCTCGCCTCGCTCGATTCCAGTGATTCGCATCGGACGGATC-G
GGATACGTTGGTACCTCTTGCAATCTGGCAACTGTTCGCCATTTAATTTTTCCTCTCCCCATTTGCCCCCAAAAAATCTA
AATATTTGTGCGTTAATTTTGCTAAAAAAAATCCTGTGCC-------------------------------ATAATTGAA
AATAAAAATCTGAAACTAGGGGAATTCACATTGCACGATGATCACATCCCCCATGGCCATCTTCCTAAGTAACTTCAGGC
ATGGAAAGCAAGCATGAAGTTCGCA-CCCC-AATGTCAACACCTTACAACGCACTTCAACTCCACTCTCCCTCCTTCCAC
AACATCTCATAAACTGCTGTATTTC----------CCTTCTCCCTTGTTTCCATCTTCCTTTGTATGCAGCCTTCATGCA
TGCATGACTGACTGTCTAGCTAGCTCGAGCAGTAGAGCTAGTGCATGACGTGATGGCACCAACGTCCCTGCAGAGGCCGA
GGAAGCCGAGGTGCCCCTCCCACCCCATGCTCTCTCTCTCCCCTGCCCTCCTCTCCCTCCTCCTCCTAGTCCCCTTCCTC
TACCTCCTCATCCACCGTTCCGCGTGCTCCCCGCCCTTCAGCAGCCTCACGACCGCCAGGCGTTCATCCTCGAGCGTCAG
CGGCTTCGCCGGAGACCTTCGCGACATCGAGTTCTCGTGGAACCACCTGCCGTTCATGTCGTCGAAGCCGCCCCTCGCCA
AGCTCAAGATCGCCGTGTTCTCGCGGAAGTGGCCCGTGGCCACGGCCCCCGGCGGCATGGAGCGGCACGCGCACACGCTG
CACACGGCGCTCGCCGCGCGGGGCCACCGCGTCCACGTGTTCACCTCGCCTCCACCGCATACCGAGGCCGCGCCCTCGCC
CTCCGCCGATGGTCCTCAGCTGCATTTCCTTGACGGCACCCCCGGCCAGTGGCGGTGCGACGAGGCGTGGAAGCTGTACG
AGGCTGAGGGCGACAACGATCCATTCGACGTCATCCACTCCGAGAGCGTGGCGGTGTTCCACCGGTACGCGCGCGGCGTG
CCCAACCTGGTGGTGTCGTGGCACGGAATCTCCCTGGAGGCGCTGCACTCGGGCATCTACCAGGACCTCGCCCGCGGCGA
GGACGAGCCCATGTCGCCGGCGTTCAACCAGAGCCTGTCGCAGTCGGTGCACCGGGTGCTGTCCGAGGTGCGCTTCTTCC
GGAGCTACGCGCACCAGGTGGCCATCAGCGACTCCACCGGGGAGATGCTCCGCGACGTGTACCAGATCCCCGGCCGCCGC
GTGCACGTAATCCTGAACGGTGTGGACGAGGCGCAGTTCACTCCGGACACGGAGCTCGGCCGCGCCTTCCGGGAAGAGAT
CGGGCTCCCCAAGAGCGCCGACCTCGTGCTCGGCGTCTCCGGGAGGCTCGTCAAGGACAAGGGCCACCCGCTGCTCTACG
AGGCCTTCTCCAAGCTCGCCCTCCGCCACCCGAACGTGTACCTCCTCGTCGCCGGCAAGGGGCCGTGGGAGTCGAGGTAC
ATGGACCTGGGACGCAACGCCAAGGTGCTTGGCGCGGTGCCGCCTGGGAAGCTCAGGGCGTTCTACAACGCGCTGGACGT
GTTCGTGGACCCGACGCTGCGGCCGCAGGGCCTGGACCTGACGCTCATGGAGGCGATGCAATGCGGCAAGCCGGTGGTGG
CCACGCGGTTCCCGAGCATCAAGGGAAGCATCGTGGTGGACGAGGAGTTCGGCCACATGTTCGCGCCCAACGTGGAGTCG
CTGCTCGAGAGTCTGGAGGCGGTGGTGCAGGATGGCGCCCGGCGCGCCGCGGAGCGCGGCCGGGCGTGCAGGGAGTACGC
CAGGTCCATGTTCGCGGCCACCAAGATGGCACTAGCGTACGAGAGGCTCTTCCTTTGTGTCAAGAACGAGACCTTCTGTG
CGTACCCTTCTGAGTTTGATTAGTTTTCTCACCAGCATGTGCACTTGCTTAGTGATTTATGGCACACTAATAATCATAAA
TACAGTATGTTAT---TTAGTATTTTCTTTTTCTCTCTCCTGCTTCCCACATGAACTGCCAGCTATG-ATACTAAACGGG
TCTAAATTGTTTTAGAGAATGAGCGACACCTTATTCATAGCATAACAACTTTATGCTGCTTGTAATGGTTGGTATTATAA
GTATGGTACTAGTGTGTAATAATATATTCCTAATGCATAGTATTATATATCTCTACTTTTAATGGACGAGTTGGTGAATA
GTCTCCGCGGTTTATTTTCGCTGGGTTTTTTCGTCTCTCCTCCCACCACCTCCCACCCTGGTCCATCGGTTTATTTTTCT
CTCCACTCTTTATTACAACCAGAACTTTTCTAACGTATAACAAATCACGGATCTAACTTCCTTAAATTATGCAAATCAAT
CGATTTTTCTTATTGGTTCAATTTGTCTTAGGAAACAAATTTTAGATTTTCAGGAAACAAATAATACATTTTAATCTAAC
TTTCCTAACTTATCTAAATCAATCGATTTCTCTTATTAGTGAAATTTGTTTTAGGAAACAAATAACAGACACGTCACAAA
CGGGCATGTACTGATATCACATTACCAAACAATAAAACCCCATTTGCATAGAAATCAGTTCAAAAATCCTAACTTTCCTA
AATTTTTACCTTTCCTTGATAACAACCAATATTTCCTATCTTTTCCACCTATTGAAGGAAATCACCCATCCATCAAAATT
AGCATTTTTTTTTGGAATGAGATCTCCGGGTTATGAAATTTTTTTGTGACTCTTTCCAATTGTGACCTCTCCTTCCACTC
CGGCTCCTTCTCGCATAAACACCTCCACTACAGCCAGGTGACACCACCCCAGACCTCCTACCTCTCCACACCTTCTCCGC
CACCTCCTTCTCGTACTTCATTAGCAATCCCTCCGCCACATTTGTCCACGGCGGTGTCGAGGGCATGGCGCGGCAGCATA
CCATCGGTAGAGCAGCGCATAGCAGCAGGAAGCAGCATGCAGCAGGCGAGGCGAGCGGCCGACGATGGAAGGCAGAGATG
CGGCCGGCGTGGCTGAGGGGGCGGCTGGCAGAAGATGGCCACGACTAGAGGCGACGCGAGGCAGGGGCGCGACAGCGGGG
CGAGCGAAGGGATAGGCGGCAGCAGACGGGGCGAGCACAGCCAGCGGGAGTGTGGCGCGCGGCCAGGGTGTGTGTCGCGC
GGGGCACAGTGGTGCGGTGGTTGCGGCGAGCGTGACGGCAGCGGCGGGCGCGACCGACGCGGTGTACCATGAGTGTGGGC
ATGGAGAGGGAGTGGCCCCGCGGGCGCGGAAGAGCGGCAGGCTCGGGCATGGGCATGCATAGGAGCGGGCATGTGCCACG
GGGTCAATCCGAGGAGCTCGGTGGCTACCCCTTCAATGGCCATGGCGGACGGCGGTTCTTGGCCACGACGAAATACCTAA
CAAGAGCAAACGAGAGGGAAAATAGGGGAAAGGCAAGAGGAGATCATGGCGGTGTTAATGGCGTCCTAGGGGAAGACATG
GGAGTTCGGGGCGGCGCGGATCGTACGGCAATGTCGCGGTGGCCCAAGGTTGAGGAAGACAGCAGCGACGTCGATGCGGG
GGTGTTGGACTTGATCTCGTTGGCGTGGACGAAGTAGCGAAGGCGTTCGGAGCTCCTCGGCAAGCTCCTAGCCCGCAGGG
AGGGCAGTGGCCGTGTGGACGGGGTCGGTCATGGTGGCCGTGGCGTCTGACTTCGTCCAGATCGACGGGATCGAGCGAGC
GAGGAGGAGAAGTGGATTTGGGAGGGGGTGTCGAGGAGGAGTGAGGCCATGGGGCAGGGAAGGCAGGGCGTCACCCTTAT
CCATTCCCCTTCGATGCCAGCGAGGTAGTTGGGCGGGAGCCCGGCTCTGTAGCGACGCGGCTCGGGGAACAGGAGAAGAC
GACCGCGCGGGGACTGGACCGCTGAGCTGGCTCGGTGGCAAGGCCCGGGGGGGCAGGGCGAATCCCCTTGTACATCGTCC
TTTTGGTTTTTCAATGTATTCTAACATGTTTCTCCTTTTTAACACCATTTTCTATTTATTCTTATCAACTAAATGATCTC
TACTCCTAGTGTCTCAGTTGGTAGTCTCCATTTTGGGTTTATTTTCGTCCCACCTTCCCTGGGTTTTTTTGTCCTCCCTC
CCACCTCCCAATTTCTTGTAGGTGCTTCTCAAACTGGAGGACAACATATTAGTCGAGACATTAGGGATCCTCATTGATGT
TTTATCTCTTGTCTGCATTTATTTTGTTTGCTCCAATTCTATATATTCTCACGAGTAGATGAGGTGTAAGCATGTGCAAT
GTAGTTCCTTTTTCTGCATATGGTGATTGATTTCTTCTTTGGTAACCCAACTAACGGATGGTAATCAATCTTCAAATACC
AAAACCAAACGTACAAGGCAACAATCAATTCACGTATCACAATCCGATTCTTCTTTACTACCCAGCTTAACTCACGGATG
GTAATCAATCTCCAAAGAAAGGAAACAATCACCGTCGTTTACCTCTCGCCAATGTTACATAAAAATAACGCTGAGAATTT
AGATGTATTATTTGTCATGGAGCTGTGGCTTGCCGATTACATGAAATTAATTCCCTCAGTTGTGGTGGCAAATATAATAC
ACATAATTTATATTGTTATGCAGCGCGTGTGCGTGTGAAATAGATGGATTATGGTCCCATACCCAATAAGATGGATATGT
GTGTGTGTGTTAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGTGAGGAAGAGGGAGGGAGACGGTGTGTGTGTGAGAAT
TTGATGGTAAAAAAGGTCGTCAATGTCATTTAATATGTATGAGAATATTAAATATAATATTAACATAATTGATATTGAAC
TTTTAAAGTTAATGTGGCCCCGTTGCAACACACGGGCATTCTTCTAGTTAGTATAATAGATGACTTTAATTATTGTCATG
CATGACACA---TAGTAGTATAATATTTATTATGATATGGTATCAATGAGATGATACTTTCATTACGACCAGGCTTATAC
AGAGTTCCAACT----AAAAAAATTATATAAAGTTTTCCGAATACATTCTCGAGGTACATCATAAAAGCTTAAAGAGTTC
-AAAAAATCACACATCCTAGCATTTGGAGGT------------CTAGAAAGATGCAAATTTGTGACCCTCAAGGTACC--
---------CTCAGACCCATCTTAGTTCAACCAAATGAACTGAATTTTCTGAAGTTACGTGGCTTCTGAAATTTTAGTTC
ACTTTTTTTCTTGAAGGGAAAGCCTCATTGCACTTTTATTTAAACTTTGGCAGAGTTACATTTAAGGGTATATGTGCTAG
TAAAAACCTGTGAGCATCATCTACCCAATCATATCTAGATTTACAATCATAATAAAACCTCGCTAAATAATGTGTCGATC
TATTTGCTTCCCTTGGACAATGCTTGAAAAAAAAAACATCAGTAGCTAAATGGAAACAATCTGCAAGTATTGCTGCATCA
GGGCTCCAAATGTCGGTCCTCCCATTGCACGCTTCAACCAGCTCGATAGTCGGACAACAAGAACCTTAGTGCAGCTGACT
TCAGTAATTAGCTTCAGATCCTATAGCAACTTCGGCGTCCCAGCAACAGCTTCACCCCAAGAATTCGAAAGAACTGCGGC
TACA--------GCACCAGTGACATTTACAAAACAAAAAACATC
>chr3B_442
CTAAAAAC------------------------------------------------------------------------
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--------------------------------------------------GGGCGGCCTAATACTGTAGGCGGGACGGAA
GGTACTCTTGCTATAAGCGAGATAT---------AGGGCTCGCCTTGCTCGATTCCAGTGATGCGAATCTGACGGATCGG
GGATACGTTCATATCTCTTGTAATCTGGCAACTGTTCGCCATTTATTTTTTCCTCTCCCCACTTCCCCCCAAAAAATCTA
AATATCTGTGCGTTAATTTTGCTACAAAAAATCTTGTACCCTAATTGAAAATGAAAATCGTTCGCAAAAAAATAATTGAA
AATGAAAATCTGAAACTAGGGGA---CACATTGCACGATGATCACATCCCCCATGGC-ATCTTCCTAAGTAACTTCAGGC
ATGGAAAGCAAGCATGAAGTTCGCACCCCC-GATGTCAACACCTTACAACGCACTCCAATTCCACTCTCGCTCCTTCCAA
AAGGTCTCATAAACTGCTGTATTTCCGCCCTTGTTCCTTCTCCCTTGCTTCCATCTTCCTTTGTATGCAGCCTTC----A
TGCATGACTGACTGTCTAACTAGCTCGAGCAGTAGAGCTAGTGCATGACGTGATGGCTCCAACCTCCCTGCAGAGGCCGA
GGAAGCCGAGGTGCCCCTCCCACCCCATGCTCTCTCTCTCCCCTGCCCTCCTCTCCCTCCTCCT---CGTCCCCTTCCTC
TACCTCCTCATCCACCGTTCCGCGTGCTCCCCGCCCTTCAGCAACCTCACGACCGCCAGGCGCTCATCCTCGAGCGTGAG
CGGCTTCGCCGGAGACCTTCGTGACATCGAGTTCTCGTGGAACCACCTGCCGTTCATGTCGTCGAAGCCACCCCCCGCCA
AGCTCAAGATCGCCGTGTTCTCGCGGAAGTGGCCCGTGGCCACGGCCCCTGGCGGCATGGAGCGGCACGCGCACACGCTG
CACACGGCGCTCGCCGCGCGGGGCCACCGCGTCCACGTGTTCACCTCACCTCCGCCGCATACCGAGGCCGCGCCCTCGCC
CACCGCCGATGGGCCTCAGCTGCATTTCCTTGACGGCACCCCCGGCCAGTGGCGGTGCGACGAGGCATGGAAGCTGTACG
AGGCCGAGGGCGACAACGATCCGTTCGACGTCATCCACTCCGAGAGCGTGGCGGTGTTCCACCGGTACGCGCGCGGCGTG
CCCAACCTGGTCGTGTCGTGGCACGGAATCTCCCTGGAGGCGCTGCACTCGGGCATCTACCAGGACCTCGCCCGCGGCGA
GGACGAGCCCATGTCGCCGGCGTTCAACCAGAGCCTGTCGCAGTCGGTGCACCGGGTGCTGTCCGAGGTGCGCTTCTTCC
GGAGCTACGCGCACCAGGTGGCCATCAGCGACTCCACCGGGGAGATGCTCCGCGACGTGTACCAGATCCCCGGCCGCCGC
GTGCACGTAATCCTGAACGGCGTGGACGAGGCGCAGTTCACTCCGGACACGGAGCTCGGCCGCGCCTTCCGGGAAGAGAT
CGGGCTCCCCAAGAGCGCCGACCTCGTGCTCGGCGTGTCCGGGAGGCTCGTCAAGGACAAGGGCCACCCTCTGCTCTACG
AGGCCTTCTCCAAGCTCGCCCTCCGCCACCCGAACGTGTACCTCCTGGTCGCCGGCAAGGGGCCGTGGGAGTCGAGGTAC
ATGGACCTGGGACGCAACGCCAAGGTGCTTGGCGCGGTGCCGCCCGGGAAGCTCAGGGCGTTCTACAACGCGCTGGACGT
GTTCGTGGACCCGACGCTGCGGCCGCAGGGCCTGGACCTGACGCTCATGGAGGCGATGCAATGCGGCAAGCCGGTGGTGG
CCACGCGGTTCCCGAGCATCAAGGGAAGCATCGTGGTGGACGAGGAGTTCGGCCACATGTTCGCGCCCAACGTGGAGTCG
CTGCTAGAGAGTCTGGAGGCGGTGGTGCAGGATGGCGCCCGGCGCGCCGCGGAGCGCGGCCGCGCGTGCAGGGAGTACGC
CAGGTCCATGTTCGCGGCCACCAAGATGGCACTAGCGTACGAGAGGCTCTTCCTTTGTGTCAAAAACGAGACCTTCTGCA
TGTACCCCTCTGAATTTGATTAGTTTTCTCGGGAGCCTGTGCACTTGCTTAGTGATTTATGGCACACTAATAATCATAAA
TACAGTATGTACGTTCTT-----TTTATTTTTCTATCTCCTGCTTCCCACATGAACTGCCAGCTATGGATATTAATCGGG
TCTAAAAAATTTTAGAGAATGTGTGACACGTTATTCAGAGCATAACAACT------------------------------
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--------------------------------------------------------------------------TTATAC
AGAGTTCCAACTAGAAAAAAACATTATACAAAGTTTTCCGGATACATTCTAGAGGTACATCATAAAAGCTTGAAGAGTTC
-AAAAAATAACACATTCTAGCATTTGGAGTTACGTCATA-------GAAAGATGCATATTGTGACCCGCAGGCTCAGGGT
ACCCTCCGACTCGGACTCACCTTAGTTCAACCAAATGAACTGAATTTTCTGAAATTATGTGGCTTCCGAAAATTTAGTTC
ACTTTTTTTAAAGGGT--------TCATAGCGCTTTTATTTAAACTGTGGCAGTGT------------------------
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>SNPs
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
----S--------------S---------SS------------S--------------S---------------------
-------S------------------------------------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------------------------------------S--------SS------
--S----------------S-S----------------------------------------------------------
------------------------------S-------------------------------------------------
------------------------------S-------------------------------------------------
------------------------S-------------------------------------------------------
-----------------------S----------S---------------------------------------------
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---------------------------------------------------S---------------------S------
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-----------------------------------------------------S--------------------------
---S----------------------------------------------------------------------------
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---------------------------------------------------------------------S----------
----------------------------------S--------------S------------------------------
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-----S--------------S-----------------------------------------------------------
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---------------S-------------------------------------S-S------------S-S----S---S
S--SS----------------S--S------------------S-------S----------------------------
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------------------------------------------------------S------S-------S----------
---------SSS---------------------S---S-------S------------S-------------S-------
-S----S-----------------------------------------SS--------------------S---------
S------------------S---------S---------SSSS-------------------------------------
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----------------------------S-------------------------------------S------------S
--------------------------------------S-------------S-------S----S----------S---
S-------------------------------S---------------------------------------------S-
----------------------------------------------S--------S----S---------------S---
-S---------------------S-----------------S--------------------------------------
--SSSSSSSSSS---------S----------------S-----
>forward_67
-----------------------------------------------CCCTGCAAAAACACATGGCA-------------
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>reverse_1654
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-----------------------------------------------------TATCTACCAGGACCTCGCCC-------
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>forward_133
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---------------------------------TGATAAACGCCCACACACCA---------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGGGAAGAGAT
CGGGCTCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AATGCCCA
CACACCAGCTTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TGTGTACCTCCTCGTTGCC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CCAGCTTAGTCCTACGTGGC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2326
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GGAGAGTCTGGAGGCTGTGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_267
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GCTTAGTCCTACGTGGCACA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGAATGAGCGACACCTTATTCA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
