>input_sequence_50023
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-------------------------------------------------------------------------ACCCCAC
CACCGCTCCACCAACCCACACCACGCGGCGACCCTACTTGTCGCGCCGATCGCTCGCTCGCTCGCTCGCCCAACCTCCTG
CCGCCCCGCCCCTCGGCCCAGATCTGGTGGACCTCGGCGTCGGCCTCGCTTGTGCGCTCCGTCCTGCGGGGAGGGCCGGC
CAGGCCGGTCCATGGTTTCCGCCGGGGCGCAGGTGGGCGTGCTCGCGGCGTGCGTGGTGCTCTTCGTCCCCATGGGGCTC
GCCGGCTGGCACCTCAGCCGCAACAAGGTGCTCTTCTTCTCCGGCGCGCTCTTCGTCTCCCTCGCCGTCGGGGTCCACCT
CTCCCCGTACCTCCCCTCGCTGCCCCACCTCCTCGTCTCCTCCTTCCACCCCATCCGCCCCGCGGCCCCGTCCTCCTCCT
CCTCCGCCTCCTGCATCTCTGTCCTGCACCGCGTGTCGTGGGCGGACGCCGAGCCCCACGGCGGGGGCCGCGCCTGGTCG
TGGCCGCCCTCGCTCGCTGCCACCTGCGGCTTCGCGCGGCTGACGCGGGACGACGCCTCCACCCTGCTCAACGGCTCCTG
GGTCATGGTGGCTGGTGACTCGCAGGCGCGCCTGCTCGTGCTCGCGCTGCTGCGCCTCCTGCTCGACCCGGCCGCCGCAG
CGGCCGCGGAGCCGGAGCTGTTCCGCCGCCACAGCGACTACCACGCCGCCGTGCCCGCGCGGGGCATCTCCGTGGATTTC
ATATGGGCGCCCTTTGAGAGCAACCTCACACGTCTGCTCCGCGAGGATCTCCGGCTGGCGCCGCGCACCCCCGACGTGCT
CGTGCTCGGATCCGGCCTCTGGCACATGCTCCATGTCACGGAAGCCTCGCAATACGGCGACGCATTGGCGTCCATTGCTG
ATGCGGCCAACTCTCTTCGCTCGCCGCTCCCAGTGCCACCTCCACACATGTTCTGGCTCGGCCTGCCGTGGCTTGTCAAC
CCTATGCTCAACACTGATGCCAAGAAAGAGCATATGAACGACACAATGCTGAAAGCCTATGACCGTGAGGTTGATGAGAG
GTGTATCTTGCGCCGTGATGGTGGCCCATTCCGGCTGCTCGATGTGGGAAAGCTCTCCCGGGGATGTGAGCGGCAATGCA
CAGCTGACGGGATGCATTACAACGACGTGGTCTATGATGCTGTCATGCATATCATGCTCAATGCATTAGTGATTGAGTCG
CAACAAAGGATCTGACTAGTCATAGGGGTTCTTGAAGCAGGTGTGCTCTCAACCCCTCTTCTTTTGGTTCGTTACAGTAC
ATGGGTAATTAGAATGTGTTGTGAGATAGGAAGGTTCTTTTGATTGCTTCGGCATTTTGGCTGCGTGCCAGAAATCGCCA
TCAGATTGCTCAACCTTAGAGTGTAATATAGGGACATCTTAGAACCACACAGTTTTTGGCTGAATGGTAAACGGAGATGA
TGTATTGTATACTTTTTCTCGGGTAATAACTAAGATGGTGATTC------------------------------------
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>chr1B_1_TraesCS1B01G215600
CGCCGCAACCGCGTCGTGGTGGATGTCGCCGCCTCGTCTCAGGACGGATCCATCATAGACCCGA-GTCTACCGGCACCGT
CCGGGTTCCGGGCTCCGACGAGAAAGAATAGGGCATGGGAGACAGCGGCTCCCTGTATTTCGTGAGCCGGCTCATGTCCA
TGCCCTACTTTACCTTGCGAGCGACCGGACCAACACTTTAGGGAGTGCAGCCAGCCGCTAGACATGGATACGGCAA-GCC
GGACGAGCTCCGCTTAAAAATCGGTTTATGTTGCATG-TTTTTTCAAGAGTACGTCAATGACGTACCATATTTTTATATG
TTGCATGTAATAATATGAATTTGAGATTTATAATTTAAGATATCCAGTTATAGAATCAAATATTTAAAGCATGGCCTTGC
GCGTCGG-------------TCAGATTTGCCGAAGTGCGGCTGTAGATGCTCTTAACCTCCATGATGGTTACGACACGAT
CTAACATCTAGCGAGACATTAATTCGTTGCGTTGCTTAGCTTCGCCACTTGAGGTTGACATCGAGGTCGTGGGCTTCTGG
TATCACCCCGAATCAAGCGTTGGCGAAAATGATAGATGGATCGGGGTACGATCTGCTTGTAAACGAAGAGAGTGGAACCA
CAGGACAGGAGTACCACCCGGAGAAGATTAGCATCGAAAACATGTGATGCTCCTGGTTAACATACATCGAAGAGTACCAC
CAAATGCTCTTATATATATTTCTTTACGGAGGGAGTATATTTCACTTGCCGTTTGCGTCAGTGATTAACGACACGAAGCA
CACTGGAAAATAACATTCTCTA---TTTTCATAACCGACACACAGAAAAAGAAAAGAA-AAAA-GAAAACCCGAGCCGGG
CAGCGCTTTCTCTTCTTCTGGACCGGATCCACGCCGGCGCGACGCACCTCACCGCCTCAGAAAGCGCCGGAGCCACCCGC
CTGCCGCTCCGCTGTTCCCATCCCGCCGACCTCCCC------------CCTTCCCACCTCGCACCCGACCCCAACCCCAC
CACCGCTCCACCAACCCACACCACGCGGCGACCCTACTTGTCGCGCCGATCGCTCGCTCGCTCGCTCGCCCAACCTCCTG
CCGCCCCGCCCCTCGGCCCAGATCTGGTGGACCTCGGCGTCGGCCTCGCTTGTGCGCTCCGTCCTGCGGGGAGGGCCGGC
CAGGCCGGTCCATGGTTTCCGCCGGGGCGCAGGTGGGCGTGCTCGCGGCGTGCGTGGTGCTCTTCGTCCCCATGGGGCTC
GCCGGCTGGCACCTCAGCCGCAACAAGGTGCTCTTCTTCTCCGGCGCGCTCTTCGTCTCCCTCGCCGTCGGGGTCCACCT
CTCCCCGTACCTCCCCTCGCTGCCCCACCTCCTCGTCTCCTCCTTCCACCCCATCCGCCCCGCGGCCCCGTCCTCCTCCT
CCTCCGCCTCCTGCATCTCTGTCCTGCACCGCGTGTCGTGGGCGGACGCCGAGCCCCACGGCGGGGGCCGCGCCTGGTCG
TGGCCGCCCTCGCTCGCTGCCACCTGCGGCTTCGCGCGGCTGACGCGGGACGACGCCTCCACCCTGCTCAACGGCTCCTG
GGTCATGGTGGCTGGTGACTCGCAGGCGCGCCTGCTCGTGCTCGCGCTGCTGCGCCTCCTGCTCGACCCGGCCGCCGCAG
CGGCCGCGGAGCCGGAGCTGTTCCGCCGCCACAGCGACTACCACGCCGCCGTGCCCGCGCGGGGCATCTCCGTGGATTTC
ATATGGGCGCCCTTTGAGAGCAACCTCACACGTCTGCTCCGCGAGGATCTCCGGCTGGCGCCGCGCACCCCCGACGTGCT
CGTGCTCGGATCCGGCCTCTGGCACATGCTCCATGTCACGGAAGCCTCGCAATACGGCGACGCATTGGCGTCCATTGCTG
ATGCGGCCAACTCTCTTCGCTCGCCGCTCCCAGTGCCACCTCCACACATGTTCTGGCTCGGCCTGCCGTGGCTTGTCAAC
CCTATGCTCAACACTGATGCCAAGAAAGAGCATATGAACGACACAATGCTGAAAGCCTATGACCGTGAGGTTGATGAGAG
GTGTATCTTGCGCCGTGATGGTGGCCCATTCCGGCTGCTCGATGTGGGAAAGCTCTCCCGGGGATGTGAGCGGCAATGCA
CAGCTGACGGGATGCATTACAACGACGTGGTCTATGATGCTGTCATGCATATCATGCTCAATGCATTAGTGATTGAGTCG
CAACAAAGGATCTGACTAGTCATAGGGGTTCTTGAAGCAGGTGTGCTCTCAACCCCTCTTCTTTTGGTTCGTTACAGTAC
ATGGGTAATTAGAATGTGTTGTGAGATAGGAAGGTTCTTTTGATTGCTTCGGCATTTTGGCTGCGTGCCAGAAATCGCCA
TCAGATTGCTCAACCTTAGAGTGTAATATAGGGACATCTTAGAACCACACAGTTTTTGGCTGAATGGTAAACGGAGATGA
TGTATTGTATACTTTTTCTCGGGTAATAACTAAGATGGTGATTCTGACATGTAGGGGAAAACAGATTGAGCAATAGTAAG
ACATATTTAACTCCCTTTTTTTGGCGGTTGGAGGTTTTATTATTGGTCATTAACTTATGCATGGATGCTCCATAAGTCAT
GTGATGTTATGTTGATGCTTTCAGCACTCAAATCAA-AGTTATAATCACATAGTTATCCAATGTGATAAACCTGAGATGT
ATCTTTAAATGTCAGGCTGATGCTAAGATGACTGTAAACTGTACTACAACGTCTTCTCTTGTACTTACCACCAGTAGTTG
AGGTACTTCTAACATTGGAATGATTTTGAAGTTATAATCCTATGCTGATGCTAAGGTGACTGTAAATTGTACTACGCGTC
TTTTCTTGTACTAGTACTTATCACCAGTAGTTGAGGCACTCCTAACGTTGGAATATTTGGAATGATTTTGAAGCTATAAT
CCTATGACTGTACTGCATGCTGACTGTATAGCATGAGGTTACACATTCGCAGAATGCAGTGACTATTTTGGAAAGTAGAT
TACATTAATTATCGCGAGAAAAAGGATGATCACATTATTATTTATTTCTCCTAGAAAAAGAAAAATATATCGCTCTTTCT
GCCCTTGAAGAAACACAATAGTTGTTTCCTTTGTGTAGTCTTTGGTCTTCCATACTTACTGGAACAGCTTAAAACTTGCT
GTTAAAACATACAATCTATAAGAATTTGTATGATCTATACACACCTCCTCTGATCTGGTCTGTTTTATTAATTGGCATTT
TCGGTTTCAATTTGCGAACTGCAAATTTGTTCCAGTGGAACTGCCGAGCAGCTAACGGTTCATTATCTTTCAGTTTTGGC
AAATTCTCTTCTATACATAAAGCTCGTGCTGTGTGGGATCTCTACTATGATGGTTATCCTGGGCATATTCTCTCTTCTTC
ATTAGATGTGCTCGTTCCTTGTTGTATATTCCTGTTAGCAACATTCTGAAACTAACTAGCTAGATGGTCAATCTTTGTAA
AGGTA
>chr1D_4
---CGCAACCGCGTCATGGTGGATGCCGCCGGCACATCTCAGGACGGATCCATCATAGACCCGACGTCTACCGGCACCGT
CCGGGTTCCGGGCTCCGACGAGAAAGAGTAGGGCATGGGAGACGGCGGCTCCCTGTGTTCCGTGAGCCGGCTCGTGACAA
TGTCCTACTCTACCTTGCCGGCGAGCGGACCAACACTCTAGGGAGTGCAGCCGCCCGCTAGACATGGATACGGCAAAGCC
GGATGAGCTCCGCTTAAAGATTGGTTTATGTTGCATGTTTTTTTCAAGAGTACGTCAATGACGTACCATATTTT-ATATG
TTGCATGTAATAATATGGATTTTAGGTTTATAATTTAAGATATCCGGTTATAGAATCAAATATTTAAAGCATGACCTTGC
GCGTCGGGAAGGTTTGAAGATCAGATTTGCCAAAATCCGGTTACAGATGCTCTTAA------TGATGGTTACGACACGAT
CTAACATCTGGCGAGACATTAATTCGTTGCGTTGCTTAGCTTCGCCACTTGAGGTTGACATCGCGGTCGTGGGCTTCTGG
TATCACTCCTAATCAAGCGTGGGCGAAAATGATAGGTGGATCGGGGTACGATCTGCTTGTAAACGAAGAGAGTGGAACCA
CAAGGCTGGAGTACCACCCGGAGAAGATTATCAGCGAAAACATGTGATGCTCCTGGTTAACATACATCGAAGAGTACCAT
CAAATGCTCTTATAT----TTCTTTGTGGAGGGAGTATATTTGACTTGCTGTTTGCGTCAGTGATTAACGACACGAAGCA
CACTGGAAAATAACATTCTTTATTTTTTTCATAACCGACACACAGAAAAAGAAAAGAA-AAAAAGAAAGCCCGAGCCGGG
CAGCGCTTTCTTTTCTTCTGGACCGGATCCACGCCGGCGCGACGCACCTCACCGCCTCAGAAAGCGCCGGAGCCACCCGC
CTGCCGCTCCGCTGTTCCCATCCCGCCGACCTCCCCCCTCCCCTTCCTCCTTCCCACCTCGCACCCAACCCCAACCCCAC
CACCGCGCCACCAACCCACACCACGCGGCGACCCTACTTCTCGCGCCGA----TCGCTCGCTCGCTCGCCCAACCTCCTG
CCGCCCCGCTCCTCGGCCCAGATCTGGTGGACCTCGGCGTCGGCCTCGCTCGTGCACTCGGTCCTGCGGGGAGGGCCGGC
CAGGCCGGTCCATGGTTTCCGCCGCGGCGCAGGTGGGCGTGCTGGCGGCGTGCGTGGTGCTCTTCGTCCCCATGGGGCTC
GCCGGCTGGCACCTCAGCCGCAACAAGGTGCTCTTCTTCTCCGGCGCGCTCTTCGTCTCCCTGGCCGTCGGGGTCCACCT
CTCCCCGTACCTCCCCTCGCTGCCCCACCTCCTCGTCTCCTCTTTCCACCCCATCCGCCCCGCGGCCCCGTCCTCCTCCT
CCTCCGCCTCCTGCATCTCCGTCCTGCACCGCGTGTCGTGGGCGGACGCCGAGCCCCACGGCGGGGGCCGCGCCTGGTCG
TGGCCGCCCTCGCTCGCCGCCACCTGCGGCTTCGCGCGGCTGACGCGGGACGACGCCTCGACCCTGCTCAACGGCTCCTG
GGTCATGGTGGCGGGCGACTCGCAGGCGCGCCTGCTCGTGCTCGCGCTGCTGCGCCTCCTGCTCGACCCGGCCGCCGCAG
CGGCCGCGGAGCCGGAGCTGTTCCGCCGCCACAGCGACTACCACGCTGCCGTGCCGGCGCGGGGCATCTCCGTGGATTTC
ATATGGGCGCCCTTCGAGAGCAACCTCATGCGTCTGCTCCGCGAGGATCTCCGCCTGGCGCCGCGCACCCCCGACGTGCT
CGTGCTCGGATCCGGCCTCTGGCACATGCTCCATGTCACGGAAGCCTCGCAATACGGCGACGCATTGGCGTCCATTGCTG
ATGCGGCCAACTCTCTCCGCTCGCCGCTCCCAGTGCCACCTCCACACATGTTCTGGCTCGGCCTGCCGCGGCTTGTCAAC
CCTATGCTCAACACTGATGCCAAGAAAGAGCATATGAACGACACAATGCTGCAAGCCTATGACCGTGAGGTTGATGAGAG
GTGTATCTTGCGCCGTGATGGTGGCCCATTCCGGCTGCTCGATGTGGGAAAGCTCACCCGGGGATGTGAGCAGCAATGCA
CAGCTGACGGGATGCATTACAACGGCGTGGTCTATGATGCTGTCATGCATATCATGCTCAATGCATTAGTGATTGAGTCG
CAACAAAGGATCTGACTAGTCGTAGGGGTTCTTGAAGCAGGTGTGCTCCCAACCCCTCTTCTTTTGGTTCGTTACAGTAC
ATGGGTAATTAGAATGTGTTGTGAGATAGGAAGGTTCTTTTGATTGCTTCGGCATTTTGGTTACGTGCCAGAAATCGCCA
TCAGATTGCTCAACCTTAGAGTGTAATATAGGGACATCTTAGAACCACACAGTTTTTGGCTGAATGGTAAACGGAGATGA
TGTATTGTATACTTTTTCTCGGGTAATAACTAAGATGGTGATTCTGACATGTAGGGGAAAACAGATTGAGCAATACTAAG
ACATATTTAACTTTCTTTTTTGGGCAGTTGGAGGTTTTATTATTGGTCATTAACTTGTGCATGGATGCTCCATAAGTCAT
GTGATGTTATGTTGATGCTTTCAGCACTCAAATCAAAGGTTATAATCACATAGTTATCCAATGTGATAAACCTGAGATGT
ATCTGTAAATGTCAGGCTGATGCTAAGATGACTTTAAATTGTATTACACCGTTTTTTCTTGTACTTACCACCAGTAGTTG
AGGTACTTCTAACATTGGAATGATTTTGAAGTTATAATCCTATGCTGATGCTAAGATGACTGTAAATTGTATTACACCGT
CTTCT-----CTTGTACTTATCACCAGTAGTTGAGGCACTTCTAACATTGGAATATTTGGAATGATTTTGAAGCTATAAT
TCTATGACTGTGCTGCATGCTGACTGCATAGCATGAGGTTACACATTAGCAGAATGCAGTGACTATTTTGGAAAGTAGGT
TACATTAATTATCACGAGAAAAAGGATGATCACATTATTCTTATTTTCTCCTAGAAAAAGG-AAATATATCGCTCTTTCT
GCCCATGAAGAAACACAGTAGTTGTTTGCTTTGTGTAGTCTTTGGTCTTCCATACTTCCTGGAACTGCTTGAAATTCGCT
GTTAAAACGTACAATCTATAAGAATTTGTATGATCTATACACACCTCCTCTGATCTGGTCTG-TTTATTAATTGGCATTT
TCGGTTTCAATTTGCGAACTGCAAATTTGTTTCAGTGGAACTGCCGAGTAGCTAATGGTTCATTATCTTTCAGTTTTGGC
AAATTCTCTTCTATACATAAAGTTCATGGTGTGTGAGATCTCTACTATCATGGTTAGCCTGGGCATATTCTCTCTTCTTC
ATTAGATGTGCTCGTTCCTTGTTGTATATTCCTGTTAGCAACATTCTGAAACTAACTAACTAGATGGTCAATCGTTGTAA
AGGTA
>chr1A_738
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---------------------------------AGTATATTTGACCTGCTGTTTGCGTCAGTGATTAACGACACGAAGCA
CACTGGAAAATAACATTCTCTA---TTTTCATAACCGACACACAGAAAAAATAAAAAGGAAAAAGAAAACCCGAGCCGGG
CAGCGCTTTCTTTTCTTCTGGACCGGATCCACGCCGGCGCGACGCACCTCACCGCCCCAGAAAGCGCCGGAGCCACCCGC
CTGCCGCTCCGCTGTTCCCATCCCGCCGACCTCCCC------------C--TCCCACCTCGC-----ACCCCAACCCCAC
CACCGCGCCACCAACCCACACCACGCGGCGACCCTACTTCTCGCGCCG-TCGCTCGCTCGCTCGCTCGCCCAACCTCCTG
CCGCCCCGCCCCTCGGCCCAGATCTGGTGGACCTCGGCGTCGGCCTCGCTCGTGCACCCGGTCCTGCGGGGAGGGCCGGC
CAGGCCGGTCCATGGTTTCCGCCGCGGCGCAGGTGGGCGTGCTGGCGGCGTGCGTGGTGCTCTTCGTCCCCATGGGGCTC
GCCGGCTGGCACCTCAGCCGCAACAAGGTGCTCTTCTTCTCCGGCGCGCTCTTCGTCTCCCTGGCCGTCGGGGTTCACCT
CTCCCCGTACCTCCCCTCGCTGCCCCACCTCCTCGTCTCCTCCTTCCACCCCCTCCGCCCCGCTGCCCCGTCCTCCTCCT
CCTCCGCCTCCTGCATCTCCGTCCTGCACCGCGTGTCGTGGGCGGACGCCGAGCCCCACGGCGGGGGCCGCGCCTGGTCG
TGGCCGCCCTCGCTCGCCGCCACCTGCGGCTTCGCACGGCTGACGCGGGACGACGCCTCGACCCTGCTCAACGGCTCCTG
GGTCATGGTGGCCGGGGACTCGCAGGCGCGCCTGCTCGTGCTCGCGCTGCTGCGCCTCCTGCTCGACCCGGCCGCCGCAG
CGGCCGCGGAGCCGGAGCTGTTCCGCCGCCACAGCGACTACCACGCTGCCGTGCCGGCGCGGGGCATCTCCGTGGATTTC
ATATGGGCGCCCTTCGAGAGCAACCTCACGCGTCTGCTTCGCGAGGATCTCCGCCTGGCGCCGCGCACCCCCGACGTGCT
CGTGCTCGGATCCGGCCTCTGGCACATGCTCCATGTCACCGACTCCCCGCAGTACGGCGAAGCATTGGCGTCCATTGCTG
ATGCGGCCAACTCCCTCCGCTCGCCACTCCCCGTGCCACCGCCGCACATGTTCTGGCTCGGCCTGCCGCGGCTTGTCAAC
CCTATGCTCAACACTGATGCCAAGAAGGAGCATATGAACGACACAATGCTGCAAGCCTATGACCGTGAGGTTGATGAGAG
GTGTATCTTGCGCCGTGATGGTGGCCCATTCCGGCTGCTAGATGTGGGAAAGCTCTCCCGGGGATGTGAGCAGCAATGCA
CGGCCGACGGGATGCATTACAACGGCGTGGTGTATGATGCTGTCATGCATATCATGCTCAATGCTTTAGTGATTGAGTCG
CAACAAAGGATCTGACTAGTTGTACGGGTTCTTGAAGCAGGTGTGCTCCCAACCCCTCTTCTTTTGGTTCGTTACAGTAC
ATGGGTAATTAGAATGTGTTGTGAGATAGGAAGGTTCTTTTGATTGTTTCGGCATTTTGGTTGCGTGCCAGAAATCGCCA
TCAGATTGCTCAACCTTAGAGTGTAATATAGGGACATCTTAGAACCACACAGTTTCTGGCTGAATGGTTAACAGAGATGA
TGTATTGTATACTTTTTCTCGGGTAATAACTAAGATGGTGATTCTGACATGTAGGGGAAAACAGATTGAGCAATACTAAG
ACATATTTAACTTCCTTTTTTGGGCAGTTGGAGGTTTTATTATTGGTCATTAACTTGTGCATGGATGCTCCATAAGTCAT
GTGATGTTATGTTGATGCTTTCAGCACTCAAATCAAAAGTTATAATCACACAGTTATCCAATGTGATAAACCTGAGATGT
ATCTGTAAATGTCAGGCTGATGCTAAGATGACTGTAAATTGTACTACAACGTCTTTTCTTGTACTTAGCACCAGTAGTTG
AGGTACTTCTAACATTGAAATGATTTTGAAGTTATAATCCTATGCTGATGCTAAGATGACTGTAAATTGTACTACGCCGT
CTTCT-----CTTGTACTTATCACCAGTAGTTGAGGCACTTCTAACATTGGAATATTTGGAATGATTTTGAAGCTATAAT
CATATGACTGTACTGCATCCTGACTGCATAGCATGAGGTTACACATTCGCAGAATGCAGTGACTATTTTGGAAAGTAGGT
TACATTAATTATCACGAGAAAAAGGAAGATCACATTATTATTATTTTCTCCTAGAAAAAGG-AAATATATCGCTCTTTCT
GCCCATGAAGAAACGCAATAGTTGTTAACTTTGTGTAGCCTTTGGTCTTCCATACTTCCTGGAACTACTTGAAATTCGCT
GTTAAAACGTACAATCT----GAATTTGTATGATCTATACACACCTCCTCTGATCTGGTTTGTTTTATTAATTGGCATTT
TCGGTTTCAATTTGCGAACTGCAAATTTGTTCTAGTGGAACTGCCGAGTAGCTAATGGTTCATTATCTTTCAGTTTTGGC
AAATTCTCTTCTATACATAAAGTTCGTGGTGTGTGAGATCTCTACTATGATGGTTATGCTGGGCATATTCTC---TCTTC
ATTAGATGTGCTCGTTCCTTGTTGTATATTACTGTTAGCAACATTCTGGAACTAACTAACTAGATGGTCAATCTTTGTAA
AGGTA
>SNPs
SSS------------S---------S-----S-S-S--------------------------------------------
---------------------------S---------------S------------S--S-------------S--S-S-
--S------S--------SS----S------------S--------------SS--------------------------
---S--------------S--S----------------------------------------------------S-----
-----------------S----S--S-------------------S---------------------------S------
-------------------------------S--S-S---S-SS------------SSSSSS------------------
---------S-----------------------------------------------------S----------------
------S--S----------S--------------S--------------------------------------------
--S-S-S-----------------------S--S---------------------------------------------S
---------------SSSS------SS---------------S------S------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
------------------------------------------------------------------S-------------
------S--------------------------------S----------------------------------------
--------------------------------------------------S----S---S--------------------
------------------------S------------------S------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------------S-----------------------------------------S--------------------
------------S--S----------------------------------------------------------------
----------------------------------------------S--------S------------------------
--------------S--------------S-----------------------S--------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------S-----------
---------------------------------------------------S----------------------------
-----------------------------------------------------------------------S--------
------------------------S-------------------------------------------------------
---------------------S--------------------------S-------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------------S--------S---S------------------------------S-----------------------
--------------------------------------------------------------------------------
----S---------------------------------S----------------S------------------------
-------------------------------------------------------S---------------------SSS
S--SSSSSSS--S---------------------------S-----S---------------------------------
--------------------------S---------------------------------------------------S-
-------------S----------------------------SS----------------SS------------------
----S----------------------S-----------------------------S-------S----S---S-S---
--------S-----------------------------------------------------------------------
------------------------------------------------S------S------------------------
----------------------S-----S------S--------------------------------------------
----------------------------------------------------------S---------------------
-----
>forward_581
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-ATCACCCCGAATCAAGCGTT-----------------------------------------------------------
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>reverse_1775
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--------------TGAGAGCAACCTCACACGTC----------------------------------------------
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>forward_674
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-------------CCACCCGGAGAAGATTAGCAT----------------------------------------------
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>reverse_2052
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---------------------------------------------------AAAGCCTATGACCGTGAGGT---------
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>forward_1937
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-----------------------------------------------------------------------------CTG
ATGCGGCCAACTCTCTT---------------------------------------------------------------
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>reverse_3383
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----------------------CTCGTGCTGTGTGGGATCTC--------------------------------------
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