>input_sequence_50009
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------------------ATGTCCTTAATTGGCAGCAACAGCAGCAAACGTCGCCGGCGCGT---CACTGTACATCATGT
ATC---CTGCGTCTGCCCTGGCGCCGGAACGGCGGCGGCCTCCCCCTGGGCGTCCATGAACGAAGAGTTGGTTCGCCTGA
TCGCCTGGCGGGTGCTAGCGGGCGACTTGCTGGACTACGTCCGCTTCCGCGCAGTCTGCCGCCATTGGCGGTCCACCACC
GTCTGCCCGCGCGGCTGCGGCGTCATCGACCCACGGTTCCACCCGCGCCGTTGGATGATGTTCCCGGAGGGCCACGGCCT
GCACCCATCCCACACCAGGCCCCGCGACTACATCCGCTTCCTCAACCTTGACACGGGGAGGTTCGTCCGCGCCAAGCTCC
CGGTCTTCAAGGACCACTGCGTCCTAGACTCGGTGGACGGACTGCTGGTCATGCACAGGGACGAGGACACGGCCATCCGC
ATCCTCCACCCTTTCACCGGCGATGTCGTGGACCTCCCGCGGCTCGCGACCCTTGCCCCGCACATCGACCTAGGCCTGCC
CGGGGCCTTTCTCCCGGCGCAGAGTTGCTACTACCTCAGAGGAGTGTGCGCTTCCGTCAGCGTCAGCGCCGCCGGAGCCG
TCGCCGTCTTGCTCGCGCTGCATCGGATGGGCCGCGTCGCCTTCGCCACCTCCCGGGATCAGCAATGGCACATGTCAACC
TGGACATTTAGTTACATC--------------------------------------------------------------
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-----------------------------------------------------------------ACACCCCTGTCGTTT
CAAGGCAAACTATACATGGCGCGAATGAGCTTCGATCCCAAAGAGGACTCGGATATATTCCAAGTTGATCCACCACCACC
ACCACCACCACCACAGGACCATCATCATGTGGATGTGGTGGGCTCAGCTGGTTCCTCCTCATTGACATTACCACCACCCA
AGTTGATTGCCACAATTCCAACCGACAAGCTCACCCGTCCCATCCACCTAGTAGAATGCGACTCGCAGACCCTTGTGACC
GGCTACACCGATAGATCCTGGTCGCATATGATCATCCATAGGCTTGCGGATCTAATTA---CATTGGAAAACCCGATTCC
GGTAACAAGCATTGGGGACAAGGCTTTGTTCCTTAACAATGTGAGGAGCATGTCTGTTTCCTCCAATGGGGCATTGCCCA
CTGTTGTCGGCAACACCATTGTTCAGGCCAGCCTGGCAAATGGGTCACTTACCGAGTACAACCTTAGTACCGACGCTTGG
TCACGGCCTATGGATGGTTGCATCCTACGCGGACCGGTATTCGGCCCGTGTTGCCTTATCTACCATATCTACACCTGCTG
CATTCGTGAATACTGGTGAGTCGGATGAGTACAGCCACCTCTC-------------------------------------
----------------------------------------------------TTTATTTCATGTATCTCTGCATTGTTTT
TCACTATTTTTGTTACAAGTTA----GTTAGGCGAGCCGATTGATTTTCTTTTCTT----CTTTCAGGAACAAAGGACAA
CTATGCAACCGGAACAAACCTTGCAACTGGCGAGTGAAGGGAAAGTGGCGCACAGGGGTATAG-----------------
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------------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G481500
ATCTGAATTTCCTTCCCGCATGGAGCAAGCCACTGAATGGGATCACTAATCCGATGATTGCTGAGTTGTTGGCGCTCCGC
GAAGGTACAATTTTTGCACAACTCTGAGGCTACTCAAATGTGATAATGGAGATGGATAATTCAGTGATTGTGGATCTCTG
GTCATTGCGTGACAATTCTCATTCAATTGCCATGCCTATCATTAGGGAAATAGGGAAAATTGCTCTTAGTTTTTCTTCTT
TTTCGGTTATAGTACATGCTAGCAGGACTGCTAATGGTTCCGCTCATCTATGAGCTAGACGTGCTCGTGTGTTAGATGCA
ACGGAAAGCTGTGAGCCCTGATTTTCTTGTAAGCAGCCTGAGGGCTGAGTGTAACCATATGATACTTTCGTAATAAAGCT
CCCATATTCGATGCAAAAAAAAGGTCTCCTTCCCCGCCCAAGCGGAAACCCATGGAGCAATCCGTTCTCTTCTGCCCTTA
TGATTTCGAGTCCGCTTGGAATTCCATCCAGTGGTACACAAATATGTTGCAAGCGACCTAGCCGGCAATTTGACTTGTCG
TGGTGCGAGTGGATGAGTCGAACAGGGGTGAATCGTCAACAAGAAGATCAGAGGAACAAAAGACAATAAATCAAGATTAG
GAATAGACCATTAGGTAATCTTGTCTAAGTCTAAGTCTAGAACATAACTCTGATTCCTATGCAAGTTTAGGTCAAACTTG
TGCACGTGAGTTAGTGGTACTAGTAGAGTTTAAATAGCAGTAGGTTTGCTAATTTGGTTGGTCTCCAAGTTGTTACGTGA
GGAGCTAAAAGTTGGTA---AGTACATGCACGTTTGTGTGCTGTCCGTCTAGACGTGTAGTAGTAGTTCGAGTCAGTTTA
GGACTCATCAGATAGGTCTGG-TTCGGTTCGGAGGTCTAAGTCCTGCGGGCGTCTATATAAGAGCCCCGTTTGG------
------------------------------------------------AGGATAGAATTCCAACAAAATATTCAGTTCAT
TTTCCCGAGAGTTTCCCGATGTCCTTAATTGGCAGCAACAGCAGCAAACGTCGCCGGCGCGT---CACTGTACATCATGT
ATC---CTGCGTCTGCCCTGGCGCCGGAACGGCGGCGGCCTCCCCCTGGGCGTCCATGAACGAAGAGTTGGTTCGCCTGA
TCGCCTGGCGGGTGCTAGCGGGCGACTTGCTGGACTACGTCCGCTTCCGCGCAGTCTGCCGCCATTGGCGGTCCACCACC
GTCTGCCCGCGCGGCTGCGGCGTCATCGACCCACGGTTCCACCCGCGCCGTTGGATGATGTTCCCGGAGGGCCACGGCCT
GCACCCATCCCACACCAGGCCCCGCGACTACATCCGCTTCCTCAACCTTGACACGGGGAGGTTCGTCCGCGCCAAGCTCC
CGGTCTTCAAGGACCACTGCGTCCTAGACTCGGTGGACGGACTGCTGGTCATGCACAGGGACGAGGACACGGCCATCCGC
ATCCTCCACCCTTTCACCGGCGATGTCGTGGACCTCCCGCGGCTCGCGACCCTTGCCCCGCACATCGACCTAGGCCTGCC
CGGGGCCTTTCTCCCGGCGCAGAGTTGCTACTACCTCAGAGGAGTGTGCGCTTCCGTCAGCGTCAGCGCCGCCGGAGCCG
TCGCCGTCTTGCTCGCGCTGCATCGGATGGGCCGCGTCGCCTTCGCCACCTCCCGGGATCAGCAATGGCACATGTCAACC
TGGACATTTAGTTACATC--------------------------------------------------------------
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-----------------------------------------------------------------ACACCCCTGTCGTTT
CAAGGCAAACTATACATGGCGCGAATGAGCTTCGATCCCAAAGAGGACTCGGATATATTCCAAGTTGATCCACCACCACC
ACCACCACCACCACAGGACCATCATCATGTGGATGTGGTGGGCTCAGCTGGTTCCTCCTCATTGACATTACCACCACCCA
AGTTGATTGCCACAATTCCAACCGACAAGCTCACCCGTCCCATCCACCTAGTAGAATGCGACTCGCAGACCCTTGTGACC
GGCTACACCGATAGATCCTGGTCGCATATGATCATCCATAGGCTTGCGGATCTAATTA---CATTGGAAAACCCGATTCC
GGTAACAAGCATTGGGGACAAGGCTTTGTTCCTTAACAATGTGAGGAGCATGTCTGTTTCCTCCAATGGGGCATTGCCCA
CTGTTGTCGGCAACACCATTGTTCAGGCCAGCCTGGCAAATGGGTCACTTACCGAGTACAACCTTAGTACCGACGCTTGG
TCACGGCCTATGGATGGTTGCATCCTACGCGGACCGGTATTCGGCCCGTGTTGCCTTATCTACCATATCTACACCTGCTG
CATTCGTGAATACTGGTGAGTCGGATGAGTACAGCCACCTCTC-------------------------------------
----------------------------------------------------TTTATTTCATGTATCTCTGCATTGTTTT
TCACTATTTTTGTTACAAGTTA----GTTAGGCGAGCCGATTGATTTTCTTTTCTT----CTTTCAGGAACAAAGGACAA
CTATGCAACCGGAACAAACCTTGCAACTGGCGAGTGAAGGGAAAGTGGCGCACAGGGGTATAGTCCGCCGGCCTTGCTTA
AATTTCAACACTTTGGCTGCTAATCTACTGTATTTATTATCCATGCTTAACTGGTACCACTTGTTCTTTATTTGTTGCTG
GTACGTTGACGCCGTACGTCTTTGATCTCGAACATGCAGGGCTTTTTT--------------------------------
----------TACAATATCGTGATTTTGTAGAAACCATAGTTTGAATGATACTTTTTTATCTGTTTGGCATCAACAAATA
CCATGGTTTTATAAACTGTAGTATCTCCAACACTATAGTATACATTTTCGCAGTATTTTAAGAAGAGACCTTGACCTGTT
TTTATAAACCAGGCTGATAAAATTGTGTCTTTTAGAAACTGGAGTATTCATTGCACGCACATTGGAATACTTATGTTTCA
CGCTACCACGG-TTTTAAAATATGATGCTATCAATAGTTGGTTTATTTAC--------TGTCTCTTTTGTGAACAGCGTC
TGCAACCAGTGATCATTTCCCATTTGTTAGAGATAAAGAAACAATTTTCTATTTACACTGAAATATTACTGTCACATAGG
TATGTTAT--TCTGTATGCAAAGACTGTTGTGTGTGCATTTAGTATTAATT--GACGGTCCAGAACACATTGTTATGATG
TGCTTATGGACAGACTATATGCCATGCATGTGAAATTTTCTTATGTGCCAGTATAGAATTAGTTATCAATGGAAACACTT
TTTTGTTTAGAGTTAAATGCACTAGAGGTGCCCTAACTTGTCCTCCATGGTCAGTTTAGTGCCTAAAGTTGCAAAATACA
CGAAAGTGGTGCTCGAACTTGTCTGGCTGTGCAAATACGGTGCCTCCGTCCCTATGCAGATGTTTATTTTGCAGAAACCT
CCTCATATTTTACATAATTACGTAAAAAAGACCTCAAATACAACGTATGGTAGCGAGAACTAACATGAAAAAATATCAAC
GGGAAGGGGTTTTGAACCTAGCTCCTCCAGGATAACTACCGCATGATCTGGTCAACCGGCTGAAATATGCCATGCGTA
>chr7A_785
CCAAGTTGT-----------------------------------------------------------------------
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------------------------------------------------------------------------TTACGTGA
GGAGCTAAAGCTAAAAGTTGAGTACATGCACGTTTGTGCGCTGTCCGTCTAGACGTGTAGTAGTAGTTCGAATCAGTTCA
GGACTCATCAGATAGGTCTGGTTTTGGTTCCGAGGTTCAAGTCCTGCGTGCGTCTATATAAGCGCACTGTCCTTGGGTAC
AAAAGTTTTTTGTGCGCGTGTTCGTTCTTTCTAATGCGATCCTTCCTAAGGATAGAATTCCAACAAAATATTCAGTTCAC
TTTTCCCAAGAATTCA-GATGTCCTTAATTGCCAGCAACAGCACCAAACGTCGCCGGCGCCCTCCCACTGTACATCATGC
ATCCAGCAGCGCCTCCCCTGGTGCCGGCACGGCGGCGCCCTCCCCCTGGGCGTCGATGAACCAAGACTTGATCCGCCTGA
TCGCCTGGCGGGTGCTGGCGGGCGACTTACTTGACTACGTCCGCTTCCGCGCGGTCTGCCGCCACTGGCGGTCCAGCACC
GACAGCCCACGCGGCCGCGGCGTCGTCGACCCACGCTTCCACCCGCGCCGCTGGATGATGTTCCCGGAGGGCCACGGCCT
GCACCCATCCCACACCAGGCTCCGCGACTACATCCGCTTCCTCAACCTCGACACTGGGAGGTTCGTCCGCGCCAAGCTCC
CGGTCTTCAAGGACCACTGCATCCTCGACTCGGTGGACGGCCTGCTGGTCATGCACAGGGACGAGGACACGGCCATTCGA
CTCCTCCACCCTTTCACCGGCGACATCGTGGACCTCCCGCGGCTCGTGACCCTTGCGCCGCATATCGACCTGAGCCTGCC
CGGGGCCTTTCTCCCGGCGCAGAGGTGCTACTACCTCAGAGGAGTCTGCGCTTCCCTCAGCGTCAGCGCCGCCGGAGTCG
TCTCCGTCTTGCTTGCGCTGCATCGGATGGGCCGCGTGGCCTTCGCCACATCCCGGGACCAGCAATGGCACATGTCAACC
TGGGCATTTAGTTACAAC--------------------------------------------------------------
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-----------------------------------------------------------------ACACCCTTATCGTTT
CAAGGCAAACTATACATGGCGCGAATGAGCTTCGATCCCAAAGAGAACTCGGACATATTCCAAGTTGATCCACC------
---ACCACCACCACAGGGCCATCATCATGTGGATGTGGTGGGCACAACTAGTTCCTCCTCATTGACATTGCCACCACCCA
AGTTGATTGCCACAATTCCAGCCGAGAAGCTCACCCGTCCCGTCCACCTAGTAGAATGCGACTCGCAGATCCTTGTGACC
GGCTATACCGATAGATCCTGGTCGCATATGATCATCCATAGGCTTGCGGATCTAATTA---CATCGGAGAACCCGATTCC
GGTAACAAGCATTGGGGACAAGGCTTTGTTCCTTAACAATGTGAGGAGCCTGTCTGCTTCCTCCAATGGGGCATTGCCCA
CTGTTGTCAGCAACACCATTGTTCAGGCCAGCCTGGCAAATGGGTCACTTACTGAGTACAACCTTAGTACCGACGCTTGG
TCACGGCCTATGGATGGTTGCATCTTACATGGCCCCATATTTGGACCCTGTTGCCTTATCTACCATATCTACACCTGTTG
CATTCGTGAATACTGGTGAGTCGGATCAGTACCACCTCTCTTTTTGAATAATTAATAAAGTGGCTGCATGTATCTCCGAG
ATGCAGAGGCCAAGGGACATCCTTCTTTTCTAAAGAAAAGTACCCCCTGTCTTTTTTTTCATCAATCTCTACATTGTTTT
TCACAATTTTTGCTA-AAGTTAATGAG----GCGAGCTGATTGATATTCTTCTCTGCTTGCTTTCAGGAACAAAGGACAA
CTATGCAACCGGAAGAAACCGTGCAGGTGGCGAGTGAAGGGAAAGTGGCGCATAGGGGTATAATCT----GCCTTGCTTA
AATTTCAGCACTTTTGC-GCTAATCTACTGTATTTATTATTCATGCTTAACTGGTACCACTTGTTCTTTATGTGTTGCTA
GTACAATGATGCCGTAGGTCCTTGATCTCAAACATGCGGGGCTTTTATAGCTTCAGCTGTATTTGGCAGCAAAGTATTTT
AGAGTTTTTGTAGAATACCGTGATTTTGTAGAAACCATAGTTTGAATGATT-TTTTCTATGTGTTTGGCGTCAACAAATA
CCATGCTTTTATAAACCGTAGTATCTCCAACACTATAGTATATATTTTCGTAGTATTTTAAAAAGAGACCTT-ACCTGTT
TTTATAAACCAGGCTGATAAAACCGTGTCTTTTAGAAACCGGAGTATTCATTGCACGCACACTGGAATACTTAGGTTTCA
CATTACCACAGTTTTTAAAATGTGATGCTGTCAATAGTTGGTTTATTGGAATATATAATGTCTCTTTCGTGAGCAGCGTT
TGCAACTAGTGATCATTTCCCATTTGTTAGAGATAATGAAACAATTTTCTATTTACATTGAAATATTGTTGCCACATAGG
TATGTCATATTCTGTACACATAGACTGTTGTTTGTGCATTTAGTATTAATTGAGACGGTCCAGAACACATTGTTATGATG
TGCTTATGGACTGACTGTATAC----CATGTGACATTTTCTTATGTGCCAGTTTAGAGTTAGTTATCAACTGGAACACT-
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>chr7D_785
CCAAGTTGT-----------------------------------------------------------------------
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------------------------------------------------------------------------TTACGTGA
GGAGCTAAAGCTAAAAGTTGAGTACATGCATGTTTGTGCGCTGTCCGTCTAGACGTGTAGTAGTAGTTCGAGTCAGTTTA
GGACTCATCAGA---------------------GGTTCAAGTCCTACGTGCGTCTATATAAGCGCACTGTCCTTGGGTAC
AAAAGTTTTTTGTGCGCGTGTTCGTTCTTTCTAATGTGATCCTTCATAAGGATAGAATTCCAACAAAATATTCAGTTCAT
TTTCCCAAGAGTTTTCCGATGTCCTTAATTGCCAGCAACAGCAGCAAACGTCGCCGGCGCCTTCCCACTGTACATCACGC
ATCCAGCGGCGTCTCCCCTGGCGCCGGCACGGCGGCGCCCTCCCCCTGGGCGTCCATGAACGAAGACTTGCTTCGCCTGA
TCGCCTGGCGGGTGCTGGCCGGCGACCTGCTGGGCTACGTCCGCTTCCGCGCGGTCTGCCGCCACTGGCGGTCCAGCACC
GACAGCCCACGCGGCCGCGGCATCATTGACCCACGCTTCCACCCGCGCCGCTGGATGATGTTCCCGGAGGGCCACGGCCT
GCACCCATCTCACACCAAGCTCCACGGATACATCCACTTCCTCAACCTCGACACGGGAAAGTTCGTCCGCGCCAACCTCC
CGGCCTTCAAGGACCACTGCATCCTCGACTCGGTGGACGACCTGCTGGTCATGCACAGGGACGAGGACACGGCCGTCCGC
CTCCTCCACCCTTTCACCGGCGACGTCGTGGACCTCCCGCGGCTCGTGACCCTTGTGCCGCACATTGACCTAGGCCTGCC
TGGGGCCTTTCTCCCGGCGCAGAGGTGCTACTACCTCAGAGGAGTGTGCGCTTCCCTCAGCGTCAGCGCCGCCGGAGTTG
TCACCGTCTTGCTTGCGCTGCATCGGATGGGCCGCGTCGCCTTCGCCACCTCCCGGGACCAGCAATGGCGCATGTCAACA
TGGGCACTTGGTTACAAC--------------------------------------------------------------
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-----------------------------------------------------------------ACACCCTTGTCGTTT
CAAGGCAAACTATATATGGCGCGAATGAGCTTCGATCCCAAAAAGAACTCGGATATATTCCAAGTTGATCA---------
----------------------------------------------------------------------CCACCAC---
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>chr1B_999
CGATTG--------------------------------------------------------------------------
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---------------------TCCTTAAGTGCCTGCAACAGCAGCAAACGTCGCCGGCGCGT---CACTGTACAT---GT
ATC---CAGCGTCTCCCCTGGTGCGGGCACGGCGGCGCATTCCCCCTGGGCGTCGATGAATGAAGATTTGGTTCGCCTGA
TCTCTTGGCGGGTGCTGGCGGGCGACTTGCTGGACTATGTCCGCTTCCGCGCGGTCTGCCCCCACTGGCGGTCCAGCACG
GTCTGTCCACGCGGCCGCGGTGTCATCGATCCACGGTTTCACCCGCGTCGCTGGATGATGTTACCGGAGGGCCACGGCCT
TTACCCGGCCAACAGCAGGCTCCGCGGCTACATTCGCTTCTTCAACCTAGACTCAGGGAAGTTTGTTCGCATCAAGCTCC
CGATCTTCAAGGACCACTGCATCCTTGACTCGGTGGACGGTCTGCTAGTCATGCATAGGGATGAAGACACAGCCATTCGC
ATCTTCCACCCTTTCACTGGTGATGTCGTCGACCTCCCACGACTTGTGACCCTTGTGCCGCAGATTAACCCAGGCCTGCC
TGGGGCTTTCACCATGT-GCATAAGTTCTACTACCTCAGAGGAGTATGCACTTCCTTAAGTGTCAGTGCTGCCGGAGTCA
TCACCATCTTGCTTGCACTGCATCGGATGGGCTGTGTAGCCTACGCTACCTCCCGGGATCAGCAATGGCACTTATCAACC
TGGTCGCTTAGTTATAATGCTGCTAGAGTACGTAATGGGCCTAATGGGTCCATTAGTCTTAGGGTTAATTAGAGATAAGG
ATCGTTGCTTAGGGGTCAAGTAAGCCTTGCTTGAGAGTCAAGTAAACCTCTCTATATAAAGAGAAAAGATGTATCAATAT
AATCAAGCAAGAATTAAGAAGGAAATCCCTTCCCTCTTGCCCGGCCGTGAGCAAAAAGGCCCCCGGCCGGCACTCTCGCG
CCCTCCTTCTAGCAGCGCCATAACAATTTGGTATCAGCTAGCTTCGGTTCGATCATGTCTTCACCACCGCCAAGCCCATC
TCTTCTGCTGCCTGTCACCTTGTCGCCTCCGGCGACCACCACGACCGTCACCCCGCTCCTGCCCGCGCCGGGATCCTCTG
TCGCGCCCGCCCCCACCGTCCTCACCTGGGAGGACGTGTCTGGGGTGCTGCGGGACCTAACCCAGGCGGTCCAGGAGATC
CACCTGTTCTTGGCCGGGTCCTACGGGCCGCACTCGGTTGTGCCGCCCATCGCCGCCCCCGCGCCGCCGTGGCTGCCATG
GCAGCCGCCGCACCAGGCGGCCTTCGCCGCGCTCGGCGGGCCGCTGCAGCTTCCATCCATCGCCACCACCGCCCAGCCCT
GGCTGCAGTGGCAACCGCCGCTCCTGGCGGCCTCCGCCGCGCCCGGCGCGACAGCGCAACAGCCGCTGCAGCTGCAGCAG
CCACCGCCGGTCAGCTCCGCCGCCCAGTATGGGATGCCCTACGACGGGAGTGCGACGACCTCGTTTCCATCAGCGCCGCC
GCCATCCCAGGGCGTCCACATCCAGCAGATCAAGTCCCTGCCGTCGCCGTCACCGCTTTCGTCTTGGATCGCTACCCGCC
ACGTGTCGGCGGCGGTGAGGCTGCAGGCTGCTGCGCGCGGCCTCCTAGCGCGTCGGCGTGTGCGGGCGATGCGTGGTCTG
CAGCTGCCGCTCCTCCAAGTTGCCCTTCGCTGCGCAAAGGACCTCGATCTCGTCCGCTGCGTCGGGGATCTTGGGCATGT
GGTTTCCCCCACGGGCGGCCGGCATGCTGTTTTCCTCGCGGGCAGCGACCTCAAAGTCTGCGACATCGGCGGTTGGGGGG
GCGCACCCCTCCTCGTCATTCTTCATCGCAAGTCCTCCACTCTTTCCTGTGCGGTGCAGACCAACAACCATACACGTGCA
CTCCTTTTGTCCAGGTGGTGTCCATAGGATCCAGGTGGCTGTACACGTGCACGTCCAAAATAAAGCGTCCTAGTCTATTT
CAGGTTGAGAATAATAAAACAAGCTGAGATGTAAAAGGCTTGTTTTTAGGTGTTAGGTTTGTGTTGCGTCGAGTCATGGT
TATAAGTTGGTTTGGCTGCAGCTCGAGGACAAGCTGCATGTCCAGGTGGGGTGTAGTGTTAGAGTACGTAATGGGCCTAA
TGGGCCCATTAGTCTTAGGGTTAATTAGAGATAAGGGTCGTTTGCTTAGGGGTCAAGTAAGCCTTGCTTGAGAGTCAAGT
AAACCTCTCTATATAAAGAAAGAAGATGTATCAATATAATCAAGCAAAAATTAAGATGGAAATCCCTTCCCTCTTGCCCG
GCCGTGGGCAAAAAGGCCCCCGGCCGGCACTCTCGCGCCCTCCTTCTAGCAGCGCCATAACAAATACACCCTTATCGTTT
CAAGGCAAATTATACATAGTGTGGATGAGCTTCACATTCGAAGAGAACTCGGATATATTCCAAGTTGATCCACC------
---ACAGGATGATC------------------ATGTGGTGGGCTCAGGTTCCTCATT---------ATTACCAGAACCCA
AGTTGGTTGCCACAATTCCAACTGAGACTCTCACTCGTCCTATCTTCCTGGTAGAATGCGACTCACAGATCCTTGTGACT
GGCTATACTGATAGCTCCTGGTCGCATATGCTCATTCATAGACTTGCAGATA---TAA---CATCGGAAAAACTGATTCC
GGTAAGAAGCATTGGGGACAAGGCCTTGTTCCTTAATCATGTGAGGAGTCTGTCTGTTTCCTGTAATGGGCCATTGCCTA
CTGTTGTCAGCAACACCATTGTTCAAGCCAGTCTGACAAATGGGTCACTTACTGAGTATAACCTTAGTACTGACGCTTGG
TCACGACCTATGGATGGTTGCATCCTAAGTGGCCCCGTATTTGGCCCCTGTTGCCTTGTCTACCATATCTACACCTGCTG
CATTCGTGAATACTGGTGAGTGGCATCAATACCTC---------------------------------------------
----------------------------------------------------TTTTTTTTGTTCATCTCTGCATTGTTTT
TCATGATTTTTGTTACAAGTTA----G----GCGAGCTGATTGATTTTCTTCTCTC----CTTTCAGGAACAAAGGACAA
CTATGCAATCGGAAGAAAGCGTGCAACTGGCGAGTGAAGGGAAAGTGGCGCAGTGGGGTATAGTCCA----CCTTGCTTA
AGTTTCAA------------------------------------------------------------------------
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>chr7D_1827
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-----------------ACCATCATCATGTGGATGTGGTGGGCTCAGCTGGTTCCTCCTCATTGACATTGCCACCACCCA
AGTTGATTGCCACAATTCCAGCCGAGAAGCTCACCCGTCCCATCCACCTAGTAGAATGCGACTCGCAGATCCTTGTGACC
GGCTACACCGATCGCTCATGGTCGCATATGATCATCCATAGGCTTGCGGATC---TAATTACATCGGAAAAGCCGATTCC
GGTAACAAGCATTGGGGACAAGGCTTTGTTCCTTAACAATGTGAGGAGCCTTTCTGTTTCCTCCAATGGGGCATTGCCCA
CTGTTGTCAGCAACACCATTGTTCAGGCCAGCCTGGCAAATGGGTCACTTACCGAGTACAACCTTAGTACTGACGCTTGG
TCACGGCCGATGGATGGTTGCATCTTACATGGCCCCGTATTTGGACCCTGTTGCCTTATCTACCATATCTGCACCTGTTG
CATTCGTGAATACTGGTGAGTCGGATCTGTACCACCT-------------------------------------------
--------------------------------------------------CTTTTTTTTCATCGATCTCTGCATTGTTTT
TCACTATTTTTGTTACAAGTTACTTAG----GCGAGCCGATTGATTTTCTTTTCTT----CTTTCAGGAACAAAGGACAA
CTGTGCAACCGGAATAAACCTTGCAGGTGGCGAGTGAAGGGAAAGTGGCGCATAGGGGTATAGTCCG----CCTTTCTTA
AATTTCAACACTTTTGCCGCTAATC-----TATTTATTATTCATGCTTAACTGGTACCACTTGTTCTTTATGTGTTGCTA
GTACATTGATGCCGTAGGTCCTTGATCTCAAACATGCGGGGCTTTTATAGCTTCAGCTGTGTTTGGCAGCAAAGCATTTT
AGAGTTTTTGTAGAATACCGTGATTTTGTAGAAACCATAGTTTGAATGATTATTTTTTATGTGTTTGGCATCAACAAATA
CCATGATTTTATAAACCGTAGTATCTCCAACACTATAGTATATATTTTCGTAGTATTTTAAAAAGAGACCTTGACCTGTT
TTTATAAACCAGGCTGATAAAACCATGTCTTTTAGAAACCGGAGTATTCATTGCACGCGCACTGGAATACTTAGGTTTCA
CATTACCACAGTTTTTAAAATGTGATGCTGTCAATAGTTGGTTTATTGGAATATATAATGTCTCTTTCGTGAGCAGCGTT
TGCAACTAGTGATCATTTCCCATTTGTTAGAGATAATGAAACAATTTTCTATTTACATGGAAATATTGCTGCCATATAGG
TGTGTTAT--TCTGTATGCATAGACTGTTGTGTGTGCATTTAGTATTAATTGAGACGTTCCAGAACACATTGTTATGATG
TACTTATGGACTGACTATATA--------GTGAAGTTTTCTTATGTGTCAGTATAGAATTAGTTATCAATGGGAACACTT
TTTTTTTA------------------------------------------------------------------------
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>chr4D_1875
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-----------------------------------------------------------------CATTGCCACCACCCA
AGTTGATTGCCACAATTTCAATTGACAAGCTCACCCGTCCTCTTTGCCTGGTAGAATGCGACTCACAGATCCTTGTGACT
GGCTATACTGATAGCTCCCTTTCGCGTATGTTGGTTAATAGACTTGCAGATC---TTA---CATTGGAAAAGCTGATTTC
GATAAGAAGCATTGGGGACAAGGCTTTGTTCCTTAACAACGAGAGGAGTCTGTCTGTGTCCTCCAATGGGGCATTGCCTA
CTGTTGTCAGCACCACAATTGTTCAGACCAGTCCAAAGGATGGGTCACTTACTCAGTACCACCTGAGCACTGACACTTGG
TCACGGCCTATGGATGGTTGCATCCTAAGTGGCCCAGTATTTGGTCCCTGTTGCCTTATCTACCATATCTACACTTGTTG
CAAACGTGAATTCTGGTGAGTGGGATCAGCACCTC---------------------------------------------
----------------------------------------------------TTTTT----TTCATCTCTGCATTGTTTT
TCATGATTTTTGTTACAAGC----TAG----GCGAGCGGGTTGATTTTCTTCTCTAT----TTTCAGGAACAAAGGACAG
TTGTACAATCGGAAGAAAGGGTGCAAGTGGCAAGTGAAGGGGAAGTGGCGCCTTGGGGTAT-------------------
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------------------------------------------------------------------------------
>SNPs
SSS--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------SS-SSSSS---------------------S-----------------------------------------
------------------------S-----S-----SS----------S-------------S--S-S--SSSS------
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------S------------------------S------------------------------------------------
-------S------S------------S---------S----------------------------S-------------
----------------S-----------------------------------S-----------S----------S----
--------S------S----------------------------------S-----------------------------
--------------------S---------------------------S-------------------------------
--------------------S----S--------------S---------------------------------------
----------------------------------------------S---------S-----------------------
------------------------S------------------------------S---------------------S--
--S----------S------------------------------------------------------------------
---S------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
---------------------------------------------S----------------------------SSSSSS
SSS-----------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------S-----------------------------------------------------------------------
-----------------------------S--S--S-----S-----S--------------------------------
--------------------------S-----SS--S-SSS-S-------------------------------------
-------------------------------------------------------S------SS----------------
---------------------------SSSS-------------------------------------------------
--------------S-------------------------------------S--------------SSS----------
--------------S--S----------------------S------------------------------S-------S
----S----S------S---S--------S-------S--------S---------------------------------
------------S----S--------------------------------SS--------S-------------------
-----S----------S-------------------------S-------S----------S------------------
----------------------SS---------------S---------------------S-----------S------
-SS------S-----------S-------S-----------------SSS-----------------S----S------S
------S-----------------------------S--------------------S---------S---S--------
--------------------S-----------------------------------------------------------
-----------S--------S-SSSS----------------------------------------------S-------
----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GGAAAGCTGTGAGCCCTGAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCACACCCCTGTCGTTTCAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_596
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GTCGAACAGGGGTGAATCGT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_4255
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CAAACCTTGCAACTGGCGAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_598
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CGAACAGGGGTGAATCGTCA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4392
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTGTTGCTG
GTACGTTGACG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
